Rmu_sc0014162.1_g000009

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014162.1
OG0000075
Physical Location & Seq
Forward (+)
77945 .. 81806
3862 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014162.1_g000009.1.cds

Sequence Viewer

Length: 1290 bp
atgcagctgcccgacgaagtctacttgaggtttcccgatagtatgttggaatatctcaaccagcgagacgaggaggaggcgggtgctgaagggcacgtggctcagggtgctcaggaagatgcaaggcagtacccccgagtctcgaggggagtggtggaatatggccccttgaatgtgccatcgaagccggtggtcgaagtggagatctccgttgaggagttgtttgaggaagctgaacggtgccaaagcgataccagtgtctgggctcgcttgctgttaccgaagcagttctggctgctgaagttcctgaagcgtaacgggaggttggggaggaatacatcgggggtacccaggttgccgagacggggaccgattgttacatcccggatccaagttacagttttactaatttttcggacgctttggctgacgatttctccctcgtccgacaacggatttggacaaggcgtcgctatggaaccctctcttcctcctcttcaagtctgtggcagcttggtggcgcgatttgggccgtgggagatcattccaccacccactcctcgatgctgtcttcatgttggtttgatccatgacagtggtcccctccaggtaatagtttggtcggcagtcccctctagacaatattctggttggcagtcccctccagaatatcctgtccgttctaaccaccgcttcctgggttctgatcggcagtcccctccaatgcatcatctggtcagcagaccactccagatggcacgagatgactgggccacttcagatttcaccttgaaatcccaggcaggtcctgtcattgatgtccaggctggtgaggtggatgggacccgagtgtcggatacctgttcccacattgatggagctgggtcgagaaagagggcttctctgcagcttcgtctcgagagtcccccagtggatgttagtgtcgatactcgtggaggtaagagggctcgggttgatggtgtagcaccctcaagatctacaagtgggggctctcggggttctcgcgaagaggttgctggggggtctcacacgcactcttggcgtgattgggatcacagatgccgtgtgaatgccgaggatcctcgccttgggtatcgagaagctcatgagaggttgatgagggctgtgaacatgaattatcaagcctccatcgagttgcttactcattttgatcgggagattgcccgactgcagggggagctgaatggagaaaggaagcgggcacgcgagcttcaggatgcgttggatcgtggccaagtggagcgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

429

Amino Acids

48.07

Weight (kDa)

7.21

Isoelectric Point (pI)

49.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 850
Acc36I ACCTGC 1 cut(s) 794
Acc65I GGTACC 1 cut(s) 346
AccB1I GGYRCC 2 cut(s) 240, 346
AccB7I CCANNNNNTGG 1 cut(s) 261
AccI GTMKAC 1 cut(s) 21
AccII CGCG 3 cut(s) 523, 1026, 1248
AciI CCGC 3 cut(s) 80, 691, 1240
AclWI GGATC 7 cut(s) 382, 395, 580, 1080, 1094, 1107, 1275
AcoI YGGCCR 1 cut(s) 1273
AcuI CTGAAG 5 cut(s) 108, 320, 329, 762, 1238
AcvI CACGTG 1 cut(s) 97
AcyI GRCGYC 1 cut(s) 468
AfaI GTAC 2 cut(s) 131, 348
AfeI AGCGCT 1 cut(s) 1286
AfiI CCNNNNNNNGG 6 cut(s) 261, 365, 697, 853, 1109, 1213
AgsI TTSAA 3 cut(s) 172, 500, 793
AhdI GACNNNNNGTC 1 cut(s) 467
AjnI CCWGG 5 cut(s) 350, 606, 696, 798, 822
AluBI AGCT 8 cut(s) 7, 233, 513, 881, 910, 1124, 1222, 1252
AluI AGCT 8 cut(s) 7, 233, 513, 881, 910, 1124, 1222, 1252
Alw21I GWGCWC 1 cut(s) 112
Alw26I GTCTC 5 cut(s) 60, 145, 355, 920, 1050
AlwI GGATC 7 cut(s) 382, 395, 580, 1080, 1094, 1107, 1275
AlwNI CAGNNNCTG 2 cut(s) 261, 809
Ama87I CYCGRG 6 cut(s) 135, 142, 846, 917, 969, 1014
Aor51HI AGCGCT 1 cut(s) 1286
AoxI GGCC 4 cut(s) 163, 530, 771, 1273
ApeKI GCWGC 5 cut(s) 4, 7, 295, 510, 907
ArsI GACNNNNNNTTYG 2 cut(s) 440, 472
Asp700I GAANNNNTTC 1 cut(s) 287
Asp718I GGTACC 1 cut(s) 346
AspLEI GCGC 2 cut(s) 523, 1287
AspS9I GGNCC 7 cut(s) 164, 368, 530, 599, 771, 806, 843
AsuC2I CCSGG 1 cut(s) 385
AsuHPI GGTGA 2 cut(s) 778, 842
AvaI CYCGRG 6 cut(s) 135, 142, 846, 917, 969, 1014
AvaII GGWCC 4 cut(s) 368, 599, 806, 843
BaeGI GKGCMC 2 cut(s) 96, 1246
BaeI ACNNNNGTAYC 4 cut(s) 243, 276, 338, 371
BalI TGGCCA 1 cut(s) 1275
BamHI GGATCC 2 cut(s) 387, 1099
BanI GGYRCC 2 cut(s) 240, 346
BanII GRGCYC 3 cut(s) 268, 970, 1013
BauI CACGAG 2 cut(s) 759, 951
BbrPI CACGTG 1 cut(s) 97
BbsI GAAGAC 1 cut(s) 563
Bbv12I GWGCWC 1 cut(s) 112
BbvI GCAGC 4 cut(s) 16, 282, 522, 919
BccI CCATC 6 cut(s) 187, 748, 833, 869, 971, 1178
BceAI ACGGC 2 cut(s) 517, 1068
BcgI CGANNNNNNTGC 2 cut(s) 1016, 1050
BciT130I CCWGG 5 cut(s) 352, 608, 698, 800, 824
BciVI GTATCC 1 cut(s) 850
BcnI CCSGG 1 cut(s) 385
BcoDI GTCTC 5 cut(s) 60, 145, 355, 920, 1050
BfaI CTAG 2 cut(s) 636, 1288
BfmI CTRYAG 2 cut(s) 905, 1211
BfoI RGCGCY 1 cut(s) 1288
BfuAI ACCTGC 1 cut(s) 794
BfuI GTATCC 1 cut(s) 850
BglII AGATCT 2 cut(s) 204, 995
BisI GCNGC 5 cut(s) 5, 8, 296, 511, 908
BlsI GCNGC 5 cut(s) 6, 9, 297, 512, 909
Bme1390I CCNGG 6 cut(s) 352, 385, 608, 698, 800, 824
Bme18I GGWCC 4 cut(s) 368, 599, 806, 843
BmeRI GACNNNNNGTC 1 cut(s) 467
BmeT110I CYCGRG 6 cut(s) 135, 142, 846, 917, 969, 1014
BmgT120I GGNCC 7 cut(s) 164, 368, 530, 599, 771, 806, 843
BmrFI CCNGG 6 cut(s) 352, 385, 608, 698, 800, 824
BmrI ACTGGG 2 cut(s) 778, 923
BmsI GCATC 5 cut(s) 109, 554, 736, 1070, 1249
BmuI ACTGGG 2 cut(s) 778, 923
BoxI GACNNNNGTC 1 cut(s) 597
BpiI GAAGAC 1 cut(s) 563
BplI GAGNNNNNCTC 2 cut(s) 886, 918
BpmI CTGGAG 3 cut(s) 590, 648, 734
Bpu10I CCTNAGC 2 cut(s) 102, 111
BpuEI CTTGAG 2 cut(s) 46, 976
BpuMI CCSGG 1 cut(s) 385
BsaAI YACGTR 1 cut(s) 97
BsaBI GATNNNNATC 1 cut(s) 1071
BsaHI GRCGYC 1 cut(s) 468
BsaI GGTCTC 1 cut(s) 1050
BsaJI CCNNGG 6 cut(s) 350, 533, 697, 798, 1095, 1108
BsaXI ACNNNNNCTCC 2 cut(s) 421, 451
Bsc4I CCNNNNNNNGG 6 cut(s) 261, 365, 697, 853, 1109, 1213
Bse118I RCCGGY 1 cut(s) 187
Bse1I ACTGG 3 cut(s) 255, 773, 929
Bse8I GATNNNNATC 1 cut(s) 1071
BseBI CCWGG 5 cut(s) 352, 608, 698, 800, 824
BseDI CCNNGG 6 cut(s) 350, 533, 697, 798, 1095, 1108
BseGI GGATG 4 cut(s) 380, 844, 940, 1264
BseJI GATNNNNATC 1 cut(s) 1071
BseLI CCNNNNNNNGG 6 cut(s) 261, 365, 697, 853, 1109, 1213
BseMII CTCAG 2 cut(s) 116, 125
BseNI ACTGG 3 cut(s) 255, 773, 929
BseRI GAGGAG 5 cut(s) 86, 89, 230, 483, 549
BseSI GKGCMC 2 cut(s) 96, 1246
BseXI GCAGC 4 cut(s) 16, 282, 522, 919
BseYI CCCAGC 2 cut(s) 881, 1037
Bsh1236I CGCG 3 cut(s) 523, 1026, 1248
BshFI GGCC 4 cut(s) 165, 532, 773, 1275
BshNI GGYRCC 2 cut(s) 240, 346
BsiHKAI GWGCWC 1 cut(s) 112
BsiHKCI CYCGRG 6 cut(s) 135, 142, 846, 917, 969, 1014
BsiSI CCGG 2 cut(s) 188, 385
BslFI GGGAC 7 cut(s) 381, 585, 614, 643, 700, 856, 909
BslI CCNNNNNNNGG 6 cut(s) 261, 365, 697, 853, 1109, 1213
BsmAI GTCTC 5 cut(s) 60, 145, 355, 920, 1050
BsmBI CGTCTC 3 cut(s) 60, 355, 920
BsmFI GGGAC 7 cut(s) 381, 585, 614, 643, 700, 856, 909
BsmI GAATGC 1 cut(s) 1096
BsnI GGCC 4 cut(s) 165, 532, 773, 1275
Bso31I GGTCTC 1 cut(s) 1050
BsoBI CYCGRG 6 cut(s) 135, 142, 846, 917, 969, 1014
Bsp1286I GDGCHC 6 cut(s) 96, 112, 268, 970, 1013, 1246
Bsp68I TCGCGA 1 cut(s) 1026
BspACI CCGC 3 cut(s) 80, 691, 1240
BspANI GGCC 4 cut(s) 165, 532, 773, 1275
BspCNI CTCAG 2 cut(s) 115, 124
BspFNI CGCG 3 cut(s) 523, 1026, 1248
BspHI TCATGA 1 cut(s) 1126
BspMAI CTGCAG 2 cut(s) 909, 1215
BspMI ACCTGC 1 cut(s) 794
BspPI GGATC 7 cut(s) 382, 395, 580, 1080, 1094, 1107, 1275
BspT107I GGYRCC 2 cut(s) 240, 346
BspTNI GGTCTC 1 cut(s) 1050
BsrFI RCCGGY 1 cut(s) 187
BsrI ACTGG 3 cut(s) 255, 773, 929
BssAI RCCGGY 1 cut(s) 187
BssECI CCNNGG 6 cut(s) 350, 533, 697, 798, 1095, 1108
BssNI GRCGYC 1 cut(s) 468
BssSI CACGAG 2 cut(s) 759, 951
BssT1I CCWWGG 1 cut(s) 1108
Bst2BI CACGAG 2 cut(s) 759, 951
Bst2UI CCWGG 5 cut(s) 352, 608, 698, 800, 824
Bst4CI ACNGT 3 cut(s) 240, 400, 596
Bst6I CTCTTC 3 cut(s) 492, 501, 1023
BstACI GRCGYC 1 cut(s) 468
BstBAI YACGTR 1 cut(s) 97
BstC8I GCNNGC 5 cut(s) 268, 272, 1242, 1246, 1250
BstDEI CTNAG 2 cut(s) 102, 111
BstDSI CCRYGG 1 cut(s) 533
BstF5I GGATG 4 cut(s) 380, 844, 940, 1264
BstFNI CGCG 3 cut(s) 523, 1026, 1248
BstH2I RGCGCY 1 cut(s) 1288
BstHHI GCGC 2 cut(s) 523, 1287
BstMAI GTCTC 5 cut(s) 60, 145, 355, 920, 1050
BstMWI GCNNNNNNNGC 6 cut(s) 107, 184, 292, 529, 1060, 1219
BstNI CCWGG 5 cut(s) 352, 608, 698, 800, 824
BstPAI GACNNNNGTC 1 cut(s) 597
BstSCI CCNGG 6 cut(s) 350, 383, 606, 696, 798, 822
BstSFI CTRYAG 2 cut(s) 905, 1211
BstSLI GKGCMC 2 cut(s) 96, 1246
BstUI CGCG 3 cut(s) 523, 1026, 1248
BstV1I GCAGC 4 cut(s) 16, 282, 522, 919
BstV2I GAAGAC 1 cut(s) 563
BstX2I RGATCY 4 cut(s) 204, 387, 995, 1099
BstXI CCANNNNNNTGG 2 cut(s) 596, 875
BstYI RGATCY 4 cut(s) 204, 387, 995, 1099
BsuI GTATCC 1 cut(s) 850
BsuRI GGCC 4 cut(s) 165, 532, 773, 1275
BtgI CCRYGG 1 cut(s) 533
BtsCI GGATG 4 cut(s) 380, 844, 940, 1264
BtsIMutI CAGTG 3 cut(s) 262, 601, 936
BtuMI TCGCGA 1 cut(s) 1026
BveI ACCTGC 1 cut(s) 794
Cac8I GCNNGC 5 cut(s) 268, 272, 1242, 1246, 1250
CaiI CAGNNNCTG 2 cut(s) 261, 809
CciI TCATGA 1 cut(s) 1126
CfoI GCGC 2 cut(s) 523, 1287
Cfr10I RCCGGY 1 cut(s) 187
Cfr13I GGNCC 7 cut(s) 164, 368, 530, 599, 771, 806, 843
CseI GACGC 2 cut(s) 427, 457
Csp6I GTAC 2 cut(s) 130, 347
CviAII CATG 4 cut(s) 575, 590, 1127, 1153
CviQI GTAC 2 cut(s) 130, 347
DdeI CTNAG 2 cut(s) 102, 111
DrdI GACNNNNNNGTC 1 cut(s) 850
DriI GACNNNNNGTC 1 cut(s) 467
DseDI GACNNNNNNGTC 1 cut(s) 850
EaeI YGGCCR 1 cut(s) 1273
Eam1104I CTCTTC 3 cut(s) 492, 501, 1023
Eam1105I GACNNNNNGTC 1 cut(s) 467
EarI CTCTTC 3 cut(s) 492, 501, 1023
Eco130I CCWWGG 1 cut(s) 1108
Eco24I GRGCYC 3 cut(s) 268, 970, 1013
Eco31I GGTCTC 1 cut(s) 1050
Eco47I GGWCC 4 cut(s) 368, 599, 806, 843
Eco47III AGCGCT 1 cut(s) 1286
Eco57I CTGAAG 5 cut(s) 108, 320, 329, 762, 1238
Eco72I CACGTG 1 cut(s) 97
Eco88I CYCGRG 6 cut(s) 135, 142, 846, 917, 969, 1014
EcoO109I RGGNCCY 2 cut(s) 806, 843
EcoRII CCWGG 5 cut(s) 350, 606, 696, 798, 822
EcoT14I CCWWGG 1 cut(s) 1108
EcoT22I ATGCAT 1 cut(s) 729
EcoT38I GRGCYC 3 cut(s) 268, 970, 1013
ErhI CCWWGG 1 cut(s) 1108
Esp3I CGTCTC 3 cut(s) 60, 355, 920
FaeI CATG 4 cut(s) 578, 593, 1130, 1156
FaiI YATR 7 cut(s) 44, 162, 476, 576, 591, 1128, 1154
FaqI GGGAC 7 cut(s) 381, 585, 614, 643, 700, 856, 909
FatI CATG 4 cut(s) 574, 589, 1126, 1152
FauI CCCGC 2 cut(s) 73, 1233
FblI GTMKAC 1 cut(s) 21
Fnu4HI GCNGC 5 cut(s) 5, 8, 296, 511, 908
FokI GGATG 4 cut(s) 367, 851, 947, 1271
FriOI GRGCYC 3 cut(s) 268, 970, 1013
Fsp4HI GCNGC 5 cut(s) 5, 8, 296, 511, 908
FspBI CTAG 2 cut(s) 636, 1288
GlaI GCGC 2 cut(s) 522, 1286
GluI GCNGC 5 cut(s) 5, 8, 296, 511, 908
GsaI CCCAGC 2 cut(s) 885, 1041
GsuI CTGGAG 3 cut(s) 590, 648, 734
HaeII RGCGCY 1 cut(s) 1288
HaeIII GGCC 4 cut(s) 165, 532, 773, 1275
HapII CCGG 2 cut(s) 188, 385
HgaI GACGC 2 cut(s) 427, 457
HhaI GCGC 2 cut(s) 523, 1287
Hin1I GRCGYC 1 cut(s) 468
Hin1II CATG 4 cut(s) 578, 593, 1130, 1156
Hin6I GCGC 2 cut(s) 521, 1285
HinP1I GCGC 2 cut(s) 521, 1285
HinfI GANTC 2 cut(s) 138, 922
HpaII CCGG 2 cut(s) 188, 385
HphI GGTGA 2 cut(s) 778, 842
Hpy166II GTNNAC 2 cut(s) 22, 1150
Hpy188I TCNGA 5 cut(s) 417, 448, 706, 781, 856
Hpy8I GTNNAC 2 cut(s) 22, 1150
Hpy99I CGWCG 2 cut(s) 17, 473
HpyAV CCTTC 1 cut(s) 83
HpyCH4III ACNGT 3 cut(s) 240, 400, 596
HpyCH4IV ACGT 1 cut(s) 96
HpyCH4V TGCA 5 cut(s) 4, 122, 727, 907, 1213
HpyF10VI GCNNNNNNNGC 6 cut(s) 107, 184, 292, 529, 1060, 1219
HpyF3I CTNAG 2 cut(s) 102, 111
HpySE526I ACGT 1 cut(s) 96
Hsp92I GRCGYC 1 cut(s) 468
Hsp92II CATG 4 cut(s) 578, 593, 1130, 1156
HspAI GCGC 2 cut(s) 521, 1285
KflI GGGWCCC 1 cut(s) 843
KpnI GGTACC 1 cut(s) 350
LmnI GCTCC 3 cut(s) 878, 1219, 1282
Lsp1109I GCAGC 4 cut(s) 16, 282, 522, 919
LweI GCATC 5 cut(s) 109, 554, 736, 1070, 1249
MaeI CTAG 2 cut(s) 636, 1288
MaeII ACGT 1 cut(s) 96
MaeIII GTNAC 4 cut(s) 276, 314, 376, 394
MboII GAAGA 5 cut(s) 128, 479, 488, 563, 1040
MflI RGATCY 4 cut(s) 204, 387, 995, 1099
MhlI GDGCHC 6 cut(s) 96, 112, 268, 970, 1013, 1246
MlsI TGGCCA 1 cut(s) 1275
MluCI AATT 2 cut(s) 408, 1156
MluNI TGGCCA 1 cut(s) 1275
MlyI GAGTC 2 cut(s) 147, 931
MmeI TCCRAC 4 cut(s) 27, 471, 834, 1245
Mox20I TGGCCA 1 cut(s) 1275
Mph1103I ATGCAT 1 cut(s) 729
MroXI GAANNNNTTC 1 cut(s) 287
MscI TGGCCA 1 cut(s) 1275
MslI CAYNNNNRTG 2 cut(s) 594, 873
Msp20I TGGCCA 1 cut(s) 1275
MspA1I CMGCKG 1 cut(s) 7
MspI CCGG 2 cut(s) 188, 385
MspR9I CCNGG 6 cut(s) 352, 385, 608, 698, 800, 824
Mva1269I GAATGC 1 cut(s) 1096
MvaI CCWGG 5 cut(s) 352, 608, 698, 800, 824
MvnI CGCG 3 cut(s) 523, 1026, 1248
MwoI GCNNNNNNNGC 6 cut(s) 107, 184, 292, 529, 1060, 1219
NciI CCSGG 1 cut(s) 385
NlaIII CATG 4 cut(s) 578, 593, 1130, 1156
NmeAIII GCCGAG 2 cut(s) 384, 1120
NruI TCGCGA 1 cut(s) 1026
NsiI ATGCAT 1 cut(s) 729
PaeR7I CTCGAG 2 cut(s) 142, 917
PagI TCATGA 1 cut(s) 1126
PctI GAATGC 1 cut(s) 1096
PdmI GAANNNNTTC 1 cut(s) 287
PflFI GACNNNGTC 1 cut(s) 17
PflMI CCANNNNNTGG 1 cut(s) 261
PfoI TCCNGGA 1 cut(s) 383
PkrI GCNGC 5 cut(s) 6, 9, 297, 512, 909
PleI GAGTC 2 cut(s) 146, 930
PmaCI CACGTG 1 cut(s) 97
PmlI CACGTG 1 cut(s) 97
PpsI GAGTC 2 cut(s) 146, 930
Ppu21I YACGTR 1 cut(s) 97
PpuMI RGGWCCY 2 cut(s) 806, 843
PshAI GACNNNNGTC 1 cut(s) 597
Psp5II RGGWCCY 2 cut(s) 806, 843
Psp6I CCWGG 5 cut(s) 350, 606, 696, 798, 822
PspCI CACGTG 1 cut(s) 97
PspFI CCCAGC 2 cut(s) 881, 1037
PspGI CCWGG 5 cut(s) 350, 606, 696, 798, 822
PspPI GGNCC 7 cut(s) 164, 368, 530, 599, 771, 806, 843
PspPPI RGGWCCY 2 cut(s) 806, 843
PstI CTGCAG 2 cut(s) 909, 1215
PstNI CAGNNNCTG 2 cut(s) 261, 809
PsuI RGATCY 4 cut(s) 204, 387, 995, 1099
PsyI GACNNNGTC 1 cut(s) 17
PvuII CAGCTG 1 cut(s) 7
RruI TCGCGA 1 cut(s) 1026
RsaI GTAC 2 cut(s) 131, 348
RsaNI GTAC 2 cut(s) 130, 347
RseI CAYNNNNRTG 2 cut(s) 594, 873
SatI GCNGC 5 cut(s) 5, 8, 296, 511, 908
Sau96I GGNCC 7 cut(s) 164, 368, 530, 599, 771, 806, 843
SchI GAGTC 2 cut(s) 147, 931
ScrFI CCNGG 6 cut(s) 352, 385, 608, 698, 800, 824
SduI GDGCHC 6 cut(s) 96, 112, 268, 970, 1013, 1246
SfaNI GCATC 5 cut(s) 109, 554, 736, 1070, 1249
SfcI CTRYAG 2 cut(s) 905, 1211
Sfr274I CTCGAG 2 cut(s) 142, 917
SinI GGWCC 4 cut(s) 368, 599, 806, 843
SlaI CTCGAG 2 cut(s) 142, 917
SmiMI CAYNNNNRTG 2 cut(s) 594, 873
SmlI CTYRAG 4 cut(s) 25, 142, 917, 991
SmoI CTYRAG 4 cut(s) 25, 142, 917, 991
Sse9I AATT 2 cut(s) 408, 1156
SsiI CCGC 3 cut(s) 80, 691, 1240
SspI AATATT 1 cut(s) 644
SspMI CTAG 2 cut(s) 636, 1288
StyD4I CCNGG 6 cut(s) 350, 383, 606, 696, 798, 822
StyI CCWWGG 1 cut(s) 1108
TaaI ACNGT 3 cut(s) 240, 400, 596
TaiI ACGT 1 cut(s) 99
TaqI TCGA 9 cut(s) 143, 182, 195, 562, 887, 918, 945, 1117, 1173
TaqII GACCGA 1 cut(s) 385
TasI AATT 2 cut(s) 408, 1156
TscAI CASTG 3 cut(s) 262, 601, 936
TseI GCWGC 5 cut(s) 4, 7, 295, 510, 907
TspDTI ATGAA 2 cut(s) 563, 1169
TspGWI ACGGA 3 cut(s) 199, 468, 668
TspRI CASTG 3 cut(s) 262, 601, 936
Tth111I GACNNNGTC 1 cut(s) 17
Van91I CCANNNNNTGG 1 cut(s) 261
VpaK11BI GGWCC 4 cut(s) 368, 599, 806, 843
XbaI TCTAGA 1 cut(s) 635
XhoI CTCGAG 2 cut(s) 142, 917
XmiI GTMKAC 1 cut(s) 21
XmnI GAANNNNTTC 1 cut(s) 287
XspI CTAG 2 cut(s) 636, 1288
Zsp2I ATGCAT 1 cut(s) 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.