Rh3DG280500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000075
Physical Location & Seq
Reverse (-)
28475908 .. 28482614
6707 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG280500.1

Sequence Viewer

Length: 1854 bp
ATGATAGTGGAGGGGGCTGCTCATGTCGAGAGGACAGCGACAGCTGCCCAAAAGAAGAGAGAACTACCAAGGTTAGAGGATCTGATGAGAGGTGTTTCAGTTAGTCCACAACTTATCAAGAAGGCCAGGACAGTTGATGGTGGTCCTTCGCATCTGCGGGACCTTCCCCATATCGATACCGGTAATGAGTTGGCTGATTTTTCTATTTCTCAGGAGAAACTGATGAGGGTTGTTTGCATGAACTATCATACTGGTAACAGACTCAGGGCTTCGATCGAGTCCATGAATAATTTGCAGGCTGAACTGGATGCTGAGAGGACAACATTGAAATACTATGAATCAACTGTGCAACAAACCTTGGAGGCAAGTGATAACCTGTCCGCGAAGCTGAAGCAGGCTGAGGAAGCTCTTGCCAATGAGAGGAAAGCCGGAACCAGATGTCGTTTGGGTGACCAAAGAGACAAAATTCGGGTTAGTCTCTCTCAGGTACTTCGGCAAGTAAAGCATTGGATTGGAGAAGTTGATTCCGATTATGATAATGTTCGTGAGCTGTCGGGTCAGGTTGTGGGTTTGCAGGAGCAGGTTGGGAAACTGCAAAAGGAAATTGCTGCTCACCCCTGTGCGTTGAAGTTTATACATAAGCAGGGGACTGATCATGGTGTTGACAACTTTGTAAACTCGCCGGCTTTTGCTGAGAAGAAGAAACAGGCAGCTAATGCCAGTATTGCCAAGTTGATGAAGAAGGCGATAGCACAGGGGTGGCTAATAATGGATAAGGACGTGGTGGATGTGGAGGCTGCGAAGAAGGCAGAGGCTAATGAGGCTGCTATGCGACAGGGGTTGCGCCAGTATGAAGGGGCGGCCGCTGCTACCCAGAACCCAGCTAGATCGATAGCGACAGTGCCAACGCCAACAGGAACGATTCAACAGCATAAAGTGTTGCATATGGACGATTCAACAGCAAGTGATGCCGACAGCAGTAGATACGACTATTACTATGGCGATCACGACAGCTGCTACCTTGCTGCCAGCGATACCGGGACCTTCCCCATATCGATACTGGCTGTTTGCATGAACTATCATACTGGTAACAGACTCAGGGCTTTGATCGAGTCCATGAATAATTTGCAGGCTGAACTGGATGCCGAGAGGACAACATTGATAGATTATGAATCAACTGTGCAGCAAACCTTGAAGGCAAGTGATAACCTGTCCGCGAAGCTGAAGCAGGCTGAGGAAGCTCTTGCCAATGAGAAGAAAGCCGGTATTGATGGCCAGAAATATATAGAAGAGTTGGAAAAGAAAAATGAAGCCCAAGAAGAGGAGTTGAGCAGGCAAGATGTGGATCTCGCTGAGTTATCAGTGCTGAGGGATAGAGTAGGGGAGCTTTCTGCTCAGCTGCTCCAGCTTGAAACTTTGGAGGAGCAGCTGAGGAACCGAGTCCAGGAGATCAGGGACTCTCGTGCTCAGGTTCGTGAGCTCTCGGGTCAGATTGCGGGTCCGCAGGAGCAGGGGACTGTTCATGGTGTTGACGACTTTGTAAACTCGCCGGCTTTTGCTGAGAAGAAGAAACAGGCAGCTAATGCCAGTATTACCAAGTTGATGAAGAAGGTGATAGCACAGGGGTGGCCAATAATGGATAAGGTCGTGGCGGATGTGGAGGCTGGGAAGAAGGCAGAGGCTGATGAGGCTGCTATACGAGAGGGGTTACGCCAGCATGAAGGGGCGGCCGCTGCTGCCCAGAACCCAGCTAGATCGATAGCGACAGTGCCAACGCCAACAGGAACGATTCAACAGCATAAAGTGTTGCATAGGGATGATTCAACAGCAGGTGATGCCGACAGCAGCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

617

Amino Acids

67.87

Weight (kDa)

5.77

Isoelectric Point (pI)

36.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1820
Acc36I ACCTGC 2 cut(s) 571, 1820
AccII CGCG 2 cut(s) 383, 1217
AclWI GGATC 2 cut(s) 87, 1353
AcoI YGGCCR 4 cut(s) 861, 1273, 1628, 1728
AcsI RAATTY 1 cut(s) 465
AcuI CTGAAG 2 cut(s) 410, 1244
AfaI GTAC 1 cut(s) 489
AfiI CCNNNNNNNGG 3 cut(s) 420, 1321, 1444
AgeI ACCGGT 1 cut(s) 179
AgsI TTSAA 8 cut(s) 328, 628, 926, 957, 1195, 1412, 1793, 1824
AjiI CACGTC 1 cut(s) 781
AjnI CCWGG 2 cut(s) 125, 1443
AleI CACNNNNGTG 3 cut(s) 618, 757, 1624
Alw21I GWGCWC 2 cut(s) 1468, 1482
Alw26I GTCTC 2 cut(s) 453, 482
AlwI GGATC 2 cut(s) 87, 1353
AlwNI CAGNNNCTG 1 cut(s) 1682
Ama87I CYCGRG 1 cut(s) 1483
AoxI GGCC 5 cut(s) 123, 861, 1273, 1628, 1728
ApoI RAATTY 1 cut(s) 465
AsiGI ACCGGT 1 cut(s) 179
AspLEI GCGC 1 cut(s) 846
AspS9I GGNCC 4 cut(s) 143, 160, 1041, 1499
AsuC2I CCSGG 1 cut(s) 1039
AsuHPI GGTGA 4 cut(s) 461, 605, 1624, 1844
AvaI CYCGRG 1 cut(s) 1483
AvaII GGWCC 4 cut(s) 143, 160, 1041, 1499
BalI TGGCCA 2 cut(s) 1275, 1630
BanII GRGCYC 1 cut(s) 1482
BauI CACGAG 1 cut(s) 1461
Bbv12I GWGCWC 2 cut(s) 1468, 1482
BbvCI CCTCAGC 4 cut(s) 399, 1233, 1367, 1430
BccI CCATC 2 cut(s) 131, 1265
BciT130I CCWGG 2 cut(s) 127, 1445
BclI TGATCA 1 cut(s) 652
BcnI CCSGG 1 cut(s) 1039
BcoDI GTCTC 2 cut(s) 453, 482
BfaI CTAG 2 cut(s) 885, 1752
BfuAI ACCTGC 2 cut(s) 571, 1820
BlpI GCTNAGC 1 cut(s) 1395
Bme1390I CCNGG 3 cut(s) 127, 1039, 1445
Bme18I GGWCC 4 cut(s) 143, 160, 1041, 1499
BmeT110I CYCGRG 1 cut(s) 1483
BmgBI CACGTC 1 cut(s) 781
BmgT120I GGNCC 4 cut(s) 143, 160, 1041, 1499
BmiI GGNNCC 5 cut(s) 161, 433, 1042, 1436, 1500
BmrFI CCNGG 3 cut(s) 127, 1039, 1445
BmsI GCATC 5 cut(s) 160, 298, 958, 1132, 1825
BpmI CTGGAG 1 cut(s) 1388
Bpu10I CCTNAGC 5 cut(s) 399, 1233, 1367, 1430, 1467
Bpu1102I GCTNAGC 1 cut(s) 1395
BpuMI CCSGG 1 cut(s) 1039
Bsa29I ATCGAT 4 cut(s) 174, 890, 1055, 1757
BsaBI GATNNNNATC 1 cut(s) 1344
BsaJI CCNNGG 2 cut(s) 68, 357
BsaWI WCCGGW 1 cut(s) 179
Bsc4I CCNNNNNNNGG 3 cut(s) 420, 1321, 1444
Bse118I RCCGGY 4 cut(s) 179, 682, 1262, 1549
Bse1I ACTGG 8 cut(s) 256, 309, 720, 847, 1065, 1090, 1143, 1587
Bse8I GATNNNNATC 1 cut(s) 1344
BseBI CCWGG 2 cut(s) 127, 1445
BseCI ATCGAT 4 cut(s) 174, 890, 1055, 1757
BseDI CCNNGG 2 cut(s) 68, 357
BseGI GGATG 5 cut(s) 313, 793, 1147, 1660, 1822
BseJI GATNNNNATC 1 cut(s) 1344
BseLI CCNNNNNNNGG 3 cut(s) 420, 1321, 1444
BseNI ACTGG 8 cut(s) 256, 309, 720, 847, 1065, 1090, 1143, 1587
BseRI GAGGAG 2 cut(s) 1337, 1436
BseX3I CGGCCG 2 cut(s) 861, 1728
BseYI CCCAGC 3 cut(s) 880, 1664, 1747
BsgI GTGCAG 1 cut(s) 1202
Bsh1236I CGCG 2 cut(s) 383, 1217
Bsh1285I CGRYCG 3 cut(s) 276, 864, 1731
BshFI GGCC 5 cut(s) 125, 863, 1275, 1630, 1730
BshTI ACCGGT 1 cut(s) 179
BshVI ATCGAT 4 cut(s) 174, 890, 1055, 1757
BsiEI CGRYCG 3 cut(s) 276, 864, 1731
BsiHKAI GWGCWC 2 cut(s) 1468, 1482
BsiHKCI CYCGRG 1 cut(s) 1483
BsiSI CCGG 6 cut(s) 180, 429, 683, 1038, 1263, 1550
BslFI GGGAC 5 cut(s) 173, 661, 1054, 1469, 1528
BslI CCNNNNNNNGG 3 cut(s) 420, 1321, 1444
BsmAI GTCTC 2 cut(s) 453, 482
BsmFI GGGAC 5 cut(s) 173, 661, 1054, 1469, 1528
BsnI GGCC 5 cut(s) 125, 863, 1275, 1630, 1730
BsoBI CYCGRG 1 cut(s) 1483
Bsp1286I GDGCHC 2 cut(s) 1468, 1482
Bsp143I GATC 9 cut(s) 79, 273, 652, 887, 1003, 1107, 1345, 1449, 1754
Bsp1720I GCTNAGC 1 cut(s) 1395
BspANI GGCC 5 cut(s) 125, 863, 1275, 1630, 1730
BspDI ATCGAT 4 cut(s) 174, 890, 1055, 1757
BspFNI CGCG 2 cut(s) 383, 1217
BspLI GGNNCC 5 cut(s) 161, 433, 1042, 1436, 1500
BspMI ACCTGC 2 cut(s) 571, 1820
BspPI GGATC 2 cut(s) 87, 1353
BsrFI RCCGGY 4 cut(s) 179, 682, 1262, 1549
BsrI ACTGG 8 cut(s) 256, 309, 720, 847, 1065, 1090, 1143, 1587
BssAI RCCGGY 4 cut(s) 179, 682, 1262, 1549
BssECI CCNNGG 2 cut(s) 68, 357
BssMI GATC 9 cut(s) 79, 273, 652, 887, 1003, 1107, 1345, 1449, 1754
BssSI CACGAG 1 cut(s) 1461
BssT1I CCWWGG 2 cut(s) 68, 357
Bst2BI CACGAG 1 cut(s) 1461
Bst2UI CCWGG 2 cut(s) 127, 1445
Bst4CI ACNGT 6 cut(s) 133, 346, 901, 1180, 1519, 1768
Bst6I CTCTTC 3 cut(s) 50, 1284, 1314
BstAPI GCANNNNNTGC 4 cut(s) 716, 968, 1583, 1835
BstC8I GCNNGC 9 cut(s) 297, 396, 684, 1030, 1131, 1230, 1334, 1551, 1715
BstEII GGTNACC 1 cut(s) 449
BstF5I GGATG 5 cut(s) 313, 793, 1147, 1660, 1822
BstFNI CGCG 2 cut(s) 383, 1217
BstHHI GCGC 1 cut(s) 846
BstKTI GATC 9 cut(s) 82, 276, 655, 890, 1006, 1110, 1348, 1452, 1757
BstMAI GTCTC 2 cut(s) 453, 482
BstMBI GATC 9 cut(s) 79, 273, 652, 887, 1003, 1107, 1345, 1449, 1754
BstMCI CGRYCG 3 cut(s) 276, 864, 1731
BstNI CCWGG 2 cut(s) 127, 1445
BstPI GGTNACC 1 cut(s) 449
BstSCI CCNGG 3 cut(s) 125, 1037, 1443
BstUI CGCG 2 cut(s) 383, 1217
BstX2I RGATCY 2 cut(s) 79, 1345
BstYI RGATCY 2 cut(s) 79, 1345
BstZI CGGCCG 2 cut(s) 861, 1728
Bsu15I ATCGAT 4 cut(s) 174, 890, 1055, 1757
BsuRI GGCC 5 cut(s) 125, 863, 1275, 1630, 1730
BsuTUI ATCGAT 4 cut(s) 174, 890, 1055, 1757
BtrI CACGTC 1 cut(s) 781
BtsCI GGATG 5 cut(s) 313, 793, 1147, 1660, 1822
BtsIMutI CAGTG 3 cut(s) 906, 1368, 1773
BveI ACCTGC 2 cut(s) 571, 1820
Cac8I GCNNGC 9 cut(s) 297, 396, 684, 1030, 1131, 1230, 1334, 1551, 1715
CaiI CAGNNNCTG 1 cut(s) 1682
CciNI GCGGCCGC 2 cut(s) 861, 1728
CfoI GCGC 1 cut(s) 846
Cfr10I RCCGGY 4 cut(s) 179, 682, 1262, 1549
Cfr13I GGNCC 4 cut(s) 143, 160, 1041, 1499
ClaI ATCGAT 4 cut(s) 174, 890, 1055, 1757
Csp6I GTAC 1 cut(s) 488
CspAI ACCGGT 1 cut(s) 179
CviAII CATG 8 cut(s) 23, 238, 283, 656, 1072, 1117, 1523, 1718
CviQI GTAC 1 cut(s) 488
DpnI GATC 9 cut(s) 81, 275, 654, 889, 1005, 1109, 1347, 1451, 1756
DpnII GATC 9 cut(s) 79, 273, 652, 887, 1003, 1107, 1345, 1449, 1754
EaeI YGGCCR 4 cut(s) 861, 1273, 1628, 1728
EagI CGGCCG 2 cut(s) 861, 1728
Eam1104I CTCTTC 3 cut(s) 50, 1284, 1314
EarI CTCTTC 3 cut(s) 50, 1284, 1314
EciI GGCGGA 1 cut(s) 1667
Ecl136II GAGCTC 1 cut(s) 1480
EclXI CGGCCG 2 cut(s) 861, 1728
Eco130I CCWWGG 2 cut(s) 68, 357
Eco24I GRGCYC 1 cut(s) 1482
Eco47I GGWCC 4 cut(s) 143, 160, 1041, 1499
Eco52I CGGCCG 2 cut(s) 861, 1728
Eco53kI GAGCTC 1 cut(s) 1480
Eco57I CTGAAG 2 cut(s) 410, 1244
Eco88I CYCGRG 1 cut(s) 1483
Eco91I GGTNACC 1 cut(s) 449
EcoICRI GAGCTC 1 cut(s) 1480
EcoO109I RGGNCCY 2 cut(s) 160, 1041
EcoO65I GGTNACC 1 cut(s) 449
EcoRII CCWGG 2 cut(s) 125, 1443
EcoT14I CCWWGG 2 cut(s) 68, 357
EcoT38I GRGCYC 1 cut(s) 1482
ErhI CCWWGG 2 cut(s) 68, 357
FaeI CATG 8 cut(s) 26, 241, 286, 659, 1075, 1120, 1526, 1721
FaqI GGGAC 5 cut(s) 173, 661, 1054, 1469, 1528
FatI CATG 8 cut(s) 22, 237, 282, 655, 1071, 1116, 1522, 1717
FauI CCCGC 2 cut(s) 150, 1489
FauNDI CATATG 1 cut(s) 945
FbaI TGATCA 1 cut(s) 652
FokI GGATG 5 cut(s) 320, 800, 1154, 1667, 1829
FriOI GRGCYC 1 cut(s) 1482
FspBI CTAG 2 cut(s) 885, 1752
GlaI GCGC 1 cut(s) 845
GsaI CCCAGC 3 cut(s) 884, 1668, 1751
GsuI CTGGAG 1 cut(s) 1388
HaeIII GGCC 5 cut(s) 125, 863, 1275, 1630, 1730
HapII CCGG 6 cut(s) 180, 429, 683, 1038, 1263, 1550
HhaI GCGC 1 cut(s) 846
Hin1II CATG 8 cut(s) 26, 241, 286, 659, 1075, 1120, 1526, 1721
Hin6I GCGC 1 cut(s) 844
HinP1I GCGC 1 cut(s) 844
HincII GTYRAC 2 cut(s) 664, 1531
HindII GTYRAC 2 cut(s) 664, 1531
HpaII CCGG 6 cut(s) 180, 429, 683, 1038, 1263, 1550
HphI GGTGA 4 cut(s) 461, 605, 1624, 1844
Hpy166II GTNNAC 5 cut(s) 107, 664, 676, 1531, 1543
Hpy188I TCNGA 3 cut(s) 84, 529, 1491
Hpy188III TCNNGA 6 cut(s) 28, 118, 212, 545, 1007, 1475
Hpy8I GTNNAC 5 cut(s) 107, 664, 676, 1531, 1543
HpyCH4III ACNGT 6 cut(s) 133, 346, 901, 1180, 1519, 1768
HpyCH4IV ACGT 1 cut(s) 780
HpySE526I ACGT 1 cut(s) 780
Hsp92II CATG 8 cut(s) 26, 241, 286, 659, 1075, 1120, 1526, 1721
HspAI GCGC 1 cut(s) 844
KroI GCCGGC 2 cut(s) 682, 1549
KroNI GCCGGC 2 cut(s) 684, 1551
Ksp22I TGATCA 1 cut(s) 652
Kzo9I GATC 9 cut(s) 79, 273, 652, 887, 1003, 1107, 1345, 1449, 1754
LmnI GCTCC 5 cut(s) 577, 1384, 1407, 1423, 1507
LweI GCATC 5 cut(s) 160, 298, 958, 1132, 1825
MaeI CTAG 2 cut(s) 885, 1752
MaeII ACGT 1 cut(s) 780
MaeIII GTNAC 4 cut(s) 254, 449, 1088, 1707
MalI GATC 9 cut(s) 81, 275, 654, 889, 1005, 1109, 1347, 1451, 1756
MboI GATC 9 cut(s) 79, 273, 652, 887, 1003, 1107, 1345, 1449, 1754
MflI RGATCY 2 cut(s) 79, 1345
MhlI GDGCHC 2 cut(s) 1468, 1482
MlsI TGGCCA 2 cut(s) 1275, 1630
MluCI AATT 4 cut(s) 289, 465, 603, 1123
MluNI TGGCCA 2 cut(s) 1275, 1630
MlyI GAGTC 6 cut(s) 255, 287, 1089, 1121, 1449, 1451
MmeI TCCRAC 1 cut(s) 1275
Mox20I TGGCCA 2 cut(s) 1275, 1630
MroNI GCCGGC 2 cut(s) 682, 1549
MscI TGGCCA 2 cut(s) 1275, 1630
MslI CAYNNNNRTG 4 cut(s) 618, 757, 1624, 1815
Msp20I TGGCCA 2 cut(s) 1275, 1630
MspA1I CMGCKG 6 cut(s) 44, 866, 1014, 1399, 1429, 1733
MspI CCGG 6 cut(s) 180, 429, 683, 1038, 1263, 1550
MspR9I CCNGG 3 cut(s) 127, 1039, 1445
MvaI CCWGG 2 cut(s) 127, 1445
MvnI CGCG 2 cut(s) 383, 1217
NaeI GCCGGC 2 cut(s) 684, 1551
NciI CCSGG 1 cut(s) 1039
NdeI CATATG 1 cut(s) 945
NdeII GATC 9 cut(s) 79, 273, 652, 887, 1003, 1107, 1345, 1449, 1754
NgoMIV GCCGGC 2 cut(s) 682, 1549
NlaIII CATG 8 cut(s) 26, 241, 286, 659, 1075, 1120, 1526, 1721
NlaIV GGNNCC 5 cut(s) 161, 433, 1042, 1436, 1500
NmeAIII GCCGAG 1 cut(s) 1171
NmuCI GTSAC 1 cut(s) 449
NotI GCGGCCGC 2 cut(s) 861, 1728
OliI CACNNNNGTG 3 cut(s) 618, 757, 1624
PaqCI CACCTGC 1 cut(s) 1820
PdiI GCCGGC 2 cut(s) 684, 1551
PfeI GAWTC 7 cut(s) 338, 524, 922, 953, 1172, 1789, 1820
PfoI TCCNGGA 1 cut(s) 1443
PinAI ACCGGT 1 cut(s) 179
Ple19I CGATCG 1 cut(s) 276
PleI GAGTC 6 cut(s) 255, 286, 1089, 1120, 1448, 1451
PpsI GAGTC 6 cut(s) 255, 286, 1089, 1120, 1448, 1451
PpuMI RGGWCCY 2 cut(s) 160, 1041
Psp124BI GAGCTC 1 cut(s) 1482
Psp5II RGGWCCY 2 cut(s) 160, 1041
Psp6I CCWGG 2 cut(s) 125, 1443
PspEI GGTNACC 1 cut(s) 449
PspFI CCCAGC 3 cut(s) 880, 1664, 1747
PspGI CCWGG 2 cut(s) 125, 1443
PspN4I GGNNCC 5 cut(s) 161, 433, 1042, 1436, 1500
PspPI GGNCC 4 cut(s) 143, 160, 1041, 1499
PspPPI RGGWCCY 2 cut(s) 160, 1041
PstNI CAGNNNCTG 1 cut(s) 1682
PsuI RGATCY 2 cut(s) 79, 1345
PvuI CGATCG 1 cut(s) 276
PvuII CAGCTG 4 cut(s) 44, 1014, 1399, 1429
RsaI GTAC 1 cut(s) 489
RsaNI GTAC 1 cut(s) 488
RseI CAYNNNNRTG 4 cut(s) 618, 757, 1624, 1815
SacI GAGCTC 1 cut(s) 1482
Sau3AI GATC 9 cut(s) 79, 273, 652, 887, 1003, 1107, 1345, 1449, 1754
Sau96I GGNCC 4 cut(s) 143, 160, 1041, 1499
SchI GAGTC 6 cut(s) 255, 287, 1089, 1121, 1449, 1451
ScrFI CCNGG 3 cut(s) 127, 1039, 1445
SduI GDGCHC 2 cut(s) 1468, 1482
SfaNI GCATC 5 cut(s) 160, 298, 958, 1132, 1825
SinI GGWCC 4 cut(s) 143, 160, 1041, 1499
SmiMI CAYNNNNRTG 4 cut(s) 618, 757, 1624, 1815
Sse9I AATT 4 cut(s) 289, 465, 603, 1123
SspMI CTAG 2 cut(s) 885, 1752
SstI GAGCTC 1 cut(s) 1482
StyD4I CCNGG 3 cut(s) 125, 1037, 1443
StyI CCWWGG 2 cut(s) 68, 357
TaaI ACNGT 6 cut(s) 133, 346, 901, 1180, 1519, 1768
TaiI ACGT 1 cut(s) 783
TaqI TCGA 8 cut(s) 27, 174, 272, 276, 890, 1055, 1110, 1757
TasI AATT 4 cut(s) 289, 465, 603, 1123
TauI GCSGC 4 cut(s) 863, 866, 1730, 1733
TfiI GAWTC 7 cut(s) 338, 524, 922, 953, 1172, 1789, 1820
TscAI CASTG 3 cut(s) 906, 1368, 1773
TseFI GTSAC 1 cut(s) 449
Tsp45I GTSAC 1 cut(s) 449
TspRI CASTG 3 cut(s) 906, 1368, 1773
VpaK11BI GGWCC 4 cut(s) 143, 160, 1041, 1499
XapI RAATTY 1 cut(s) 465
XcmI CCANNNNNNNNNTGG 2 cut(s) 442, 1057
XspI CTAG 2 cut(s) 885, 1752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.