Rmu_sc0004122.1_g000013

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004122.1
OG0000075
Physical Location & Seq
Forward (+)
49464 .. 51187
1724 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004122.1_g000013.1.cds

Sequence Viewer

Length: 1251 bp
atggaggctcccgagatcagtggtgctctgcaaggtccccgaggtggtggaggtgatgagggtgtccagatgcccgaggtagaggtctcggcgcaacagggagagggagaggaagcccgcgatacctatgcacgcactgatggcattgggttgaggaagggaacggcttcgcaacttcatctggggaatccccccgtgggtgtaagtatcgatacccataggggaaagaggtctcgagttgaagagattgcgcgttcgcgctcaacgagtgaagactcctgccattctcgggatgaggttgttggagggctctcgtggactctgggcgagattggggttgccgatagcgcgattgtgcacatggtacctgacctgcgcaattgtcatcgggatgcgcaggagaggttgatgaggaatgatggaattatagtgatcgatggcagtggaggagtctcagtggcgggaggccgaggatgctgttacccccttgagggagtcaatttggatctgaccggtaagttagagcgggctgaagttggtttgaaagccctagaggaggttaggtcccaggtccacattgctaaagagcgtttgagagagttggagaggcaggtccaggatcacgatgtcgagttggagcttcgcgccgagatgcatactgacaaactccacaaagctaggcgagatggcgcggcaagggctgtggatcactatcttctgtcgtccaattttcaagagaagataaataaggcattctccgatggggctttgcactcaattcgtgatagtatcgccgcttgttgtattgatcaggataaaatggtccgcgatatgcaggcgaagaatgcggcgagatcgcaagctagtgcggcgagtggtggtagtggctgggggattgttttctgcgaaccgtctgttgccacggagtgtgtctcgagccaggctggcgattgtgaggtggagggtgctcatatgggcgagcaaggggaaatgcgcgtgatggatgctgggaatgtgcaggaaggtgagaatgttagagagcgagatgtgctaggggagcaggcgcacagtgcagagagtgagataggctttctgtttttgtttttgtttttgctggcgataggcttgctaacgtgtatataccttgcattttgttggaacattggtcggttggcttgtttccagaattctcgctttttccgttgggaatataagaaatttattgggaagagacgtttcgttgggcgatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

416

Amino Acids

45.46

Weight (kDa)

5.49

Isoelectric Point (pI)

49.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 377, 396
Acc36I ACCTGC 2 cut(s) 381, 601
Acc65I GGTACC 1 cut(s) 364
AccB1I GGYRCC 1 cut(s) 364
AccBSI CCGCTC 1 cut(s) 526
AccII CGCG 8 cut(s) 120, 253, 259, 350, 645, 692, 828, 996
AciI CCGC 8 cut(s) 118, 461, 526, 692, 795, 826, 848, 869
AclWI GGATC 3 cut(s) 513, 627, 714
AcsI RAATTY 2 cut(s) 1186, 1217
AcuI CTGAAG 1 cut(s) 552
AdeI CACNNNGTG 1 cut(s) 927
AfaI GTAC 1 cut(s) 366
AfiI CCNNNNNNNGG 6 cut(s) 44, 197, 289, 490, 491, 556
AflIII ACRYGT 1 cut(s) 1133
AgeI ACCGGT 1 cut(s) 512
AgsI TTSAA 3 cut(s) 242, 544, 734
AjnI CCWGG 3 cut(s) 567, 615, 939
AluBI AGCT 3 cut(s) 640, 677, 863
AluI AGCT 3 cut(s) 640, 677, 863
Alw21I GWGCWC 3 cut(s) 28, 360, 970
Alw26I GTCTC 5 cut(s) 91, 237, 457, 937, 1225
Alw44I GTGCAC 1 cut(s) 356
AlwI GGATC 3 cut(s) 513, 627, 714
Ama87I CYCGRG 6 cut(s) 11, 39, 74, 234, 288, 934
AoxI GGCC 1 cut(s) 466
ApaLI GTGCAC 1 cut(s) 356
ApoI RAATTY 2 cut(s) 1186, 1217
AsiGI ACCGGT 1 cut(s) 512
Asp700I GAANNNNTTC 1 cut(s) 166
Asp718I GGTACC 1 cut(s) 364
AspS9I GGNCC 5 cut(s) 35, 564, 571, 613, 823
AsuHPI GGTGA 2 cut(s) 65, 1037
AvaI CYCGRG 6 cut(s) 11, 39, 74, 234, 288, 934
AvaII GGWCC 5 cut(s) 35, 564, 571, 613, 823
BaeGI GKGCMC 1 cut(s) 360
BanI GGYRCC 1 cut(s) 364
BanII GRGCYC 1 cut(s) 312
BauI CACGAG 1 cut(s) 313
BbsI GAAGAC 1 cut(s) 279
Bbv12I GWGCWC 3 cut(s) 28, 360, 970
BccI CCATC 6 cut(s) 134, 413, 431, 680, 755, 994
BceAI ACGGC 1 cut(s) 180
BcgI CGANNNNNNTGC 6 cut(s) 110, 144, 761, 795, 1108, 1142
BciT130I CCWGG 3 cut(s) 569, 617, 941
BclI TGATCA 1 cut(s) 808
BcoDI GTCTC 5 cut(s) 91, 237, 457, 937, 1225
BfaI CTAG 4 cut(s) 551, 678, 864, 1052
BfuAI ACCTGC 2 cut(s) 381, 601
BglI GCCNNNNNGGC 1 cut(s) 945
BisI GCNGC 4 cut(s) 693, 795, 849, 870
BlsI GCNGC 4 cut(s) 694, 796, 850, 871
Bme1390I CCNGG 3 cut(s) 569, 617, 941
Bme18I GGWCC 5 cut(s) 35, 564, 571, 613, 823
BmeT110I CYCGRG 6 cut(s) 11, 39, 74, 234, 288, 934
BmgT120I GGNCC 5 cut(s) 35, 564, 571, 613, 823
BmiI GGNNCC 4 cut(s) 9, 37, 366, 566
BmrFI CCNGG 3 cut(s) 569, 617, 941
BmsI GCATC 5 cut(s) 60, 382, 464, 642, 994
BpiI GAAGAC 1 cut(s) 279
BplI GAGNNNNNCTC 2 cut(s) 917, 949
BpuEI CTTGAG 1 cut(s) 509
Bsa29I ATCGAT 2 cut(s) 210, 435
BsaBI GATNNNNATC 1 cut(s) 711
BsaI GGTCTC 2 cut(s) 91, 237
BsaJI CCNNGG 6 cut(s) 40, 75, 195, 469, 567, 921
BsaWI WCCGGW 1 cut(s) 512
BsaXI ACNNNNNCTCC 4 cut(s) 441, 471, 548, 578
Bsc4I CCNNNNNNNGG 6 cut(s) 44, 197, 289, 490, 491, 556
Bse118I RCCGGY 1 cut(s) 512
Bse3DI GCAATG 1 cut(s) 576
Bse8I GATNNNNATC 1 cut(s) 711
BseBI CCWGG 3 cut(s) 569, 617, 941
BseCI ATCGAT 2 cut(s) 210, 435
BseDI CCNNGG 6 cut(s) 40, 75, 195, 469, 567, 921
BseGI GGATG 4 cut(s) 298, 397, 479, 1009
BseJI GATNNNNATC 1 cut(s) 711
BseLI CCNNNNNNNGG 6 cut(s) 44, 197, 289, 490, 491, 556
BseMI GCAATG 1 cut(s) 576
BseMII CTCAG 1 cut(s) 468
BseRI GAGGAG 2 cut(s) 462, 569
BseSI GKGCMC 1 cut(s) 360
BseYI CCCAGC 2 cut(s) 888, 1007
BsgI GTGCAG 2 cut(s) 1037, 1092
Bsh1236I CGCG 8 cut(s) 120, 253, 259, 350, 645, 692, 828, 996
BshFI GGCC 1 cut(s) 468
BshNI GGYRCC 1 cut(s) 364
BshTI ACCGGT 1 cut(s) 512
BshVI ATCGAT 2 cut(s) 210, 435
BsiHKAI GWGCWC 3 cut(s) 28, 360, 970
BsiHKCI CYCGRG 6 cut(s) 11, 39, 74, 234, 288, 934
BsiSI CCGG 1 cut(s) 513
BslFI GGGAC 2 cut(s) 21, 550
BslI CCNNNNNNNGG 6 cut(s) 44, 197, 289, 490, 491, 556
BsmAI GTCTC 5 cut(s) 91, 237, 457, 937, 1225
BsmBI CGTCTC 1 cut(s) 1225
BsmFI GGGAC 2 cut(s) 21, 550
BsmI GAATGC 2 cut(s) 752, 850
BsnI GGCC 1 cut(s) 468
Bso31I GGTCTC 2 cut(s) 91, 237
BsoBI CYCGRG 6 cut(s) 11, 39, 74, 234, 288, 934
Bsp1286I GDGCHC 4 cut(s) 28, 312, 360, 970
Bsp143I GATC 7 cut(s) 15, 432, 505, 619, 706, 808, 854
BspACI CCGC 8 cut(s) 118, 461, 526, 692, 795, 826, 848, 869
BspANI GGCC 1 cut(s) 468
BspCNI CTCAG 1 cut(s) 467
BspDI ATCGAT 2 cut(s) 210, 435
BspFNI CGCG 8 cut(s) 120, 253, 259, 350, 645, 692, 828, 996
BspLI GGNNCC 4 cut(s) 9, 37, 366, 566
BspMI ACCTGC 2 cut(s) 381, 601
BspPI GGATC 3 cut(s) 513, 627, 714
BspT107I GGYRCC 1 cut(s) 364
BspTNI GGTCTC 2 cut(s) 91, 237
BsrBI CCGCTC 1 cut(s) 526
BsrDI GCAATG 1 cut(s) 576
BsrFI RCCGGY 1 cut(s) 512
BssAI RCCGGY 1 cut(s) 512
BssECI CCNNGG 6 cut(s) 40, 75, 195, 469, 567, 921
BssMI GATC 7 cut(s) 15, 432, 505, 619, 706, 808, 854
BssSI CACGAG 1 cut(s) 313
Bst2BI CACGAG 1 cut(s) 313
Bst2UI CCWGG 3 cut(s) 569, 617, 941
Bst4CI ACNGT 2 cut(s) 912, 1070
Bst6I CTCTTC 2 cut(s) 237, 1223
BstDEI CTNAG 1 cut(s) 454
BstDSI CCRYGG 2 cut(s) 195, 921
BstENI CCTNNNNNAGG 1 cut(s) 554
BstF5I GGATG 4 cut(s) 298, 397, 479, 1009
BstFNI CGCG 8 cut(s) 120, 253, 259, 350, 645, 692, 828, 996
BstKTI GATC 7 cut(s) 18, 435, 508, 622, 709, 811, 857
BstMAI GTCTC 5 cut(s) 91, 237, 457, 937, 1225
BstMBI GATC 7 cut(s) 15, 432, 505, 619, 706, 808, 854
BstNI CCWGG 3 cut(s) 569, 617, 941
BstSCI CCNGG 3 cut(s) 567, 615, 939
BstSLI GKGCMC 1 cut(s) 360
BstUI CGCG 8 cut(s) 120, 253, 259, 350, 645, 692, 828, 996
BstV2I GAAGAC 1 cut(s) 279
BstX2I RGATCY 1 cut(s) 505
BstYI RGATCY 1 cut(s) 505
Bsu15I ATCGAT 2 cut(s) 210, 435
BsuRI GGCC 1 cut(s) 468
BsuTUI ATCGAT 2 cut(s) 210, 435
BtgI CCRYGG 2 cut(s) 195, 921
BtsCI GGATG 4 cut(s) 298, 397, 479, 1009
BtsI GCAGTG 1 cut(s) 448
BtsIMutI CAGTG 5 cut(s) 25, 135, 448, 462, 1075
BveI ACCTGC 2 cut(s) 381, 601
Cfr10I RCCGGY 1 cut(s) 512
Cfr13I GGNCC 5 cut(s) 35, 564, 571, 613, 823
ClaI ATCGAT 2 cut(s) 210, 435
Csp6I GTAC 1 cut(s) 365
CspAI ACCGGT 1 cut(s) 512
CspCI CAANNNNNGTGG 2 cut(s) 684, 719
CviAII CATG 1 cut(s) 361
CviQI GTAC 1 cut(s) 365
DdeI CTNAG 1 cut(s) 454
DpnI GATC 7 cut(s) 17, 434, 507, 621, 708, 810, 856
DpnII GATC 7 cut(s) 15, 432, 505, 619, 706, 808, 854
DraIII CACNNNGTG 1 cut(s) 927
Eam1104I CTCTTC 2 cut(s) 237, 1223
EarI CTCTTC 2 cut(s) 237, 1223
Eco24I GRGCYC 1 cut(s) 312
Eco31I GGTCTC 2 cut(s) 91, 237
Eco47I GGWCC 5 cut(s) 35, 564, 571, 613, 823
Eco57I CTGAAG 1 cut(s) 552
Eco88I CYCGRG 6 cut(s) 11, 39, 74, 234, 288, 934
EcoNI CCTNNNNNAGG 1 cut(s) 554
EcoO109I RGGNCCY 2 cut(s) 35, 564
EcoRI GAATTC 1 cut(s) 1186
EcoRII CCWGG 3 cut(s) 567, 615, 939
EcoT22I ATGCAT 1 cut(s) 657
EcoT38I GRGCYC 1 cut(s) 312
Esp3I CGTCTC 1 cut(s) 1225
FaeI CATG 1 cut(s) 364
FaqI GGGAC 2 cut(s) 21, 550
FatI CATG 1 cut(s) 360
FauI CCCGC 3 cut(s) 125, 454, 519
FauNDI CATATG 1 cut(s) 972
FbaI TGATCA 1 cut(s) 808
Fnu4HI GCNGC 4 cut(s) 693, 795, 849, 870
FokI GGATG 4 cut(s) 305, 404, 486, 1016
FriOI GRGCYC 1 cut(s) 312
Fsp4HI GCNGC 4 cut(s) 693, 795, 849, 870
FspBI CTAG 4 cut(s) 551, 678, 864, 1052
FspI TGCGCA 2 cut(s) 377, 396
GluI GCNGC 4 cut(s) 693, 795, 849, 870
GsaI CCCAGC 2 cut(s) 892, 1011
HaeIII GGCC 1 cut(s) 468
HapII CCGG 1 cut(s) 513
Hin1II CATG 1 cut(s) 364
HinfI GANTC 5 cut(s) 187, 275, 319, 450, 495
HpaII CCGG 1 cut(s) 513
HphI GGTGA 2 cut(s) 65, 1037
Hpy166II GTNNAC 3 cut(s) 318, 358, 574
Hpy188I TCNGA 2 cut(s) 510, 760
Hpy8I GTNNAC 3 cut(s) 318, 358, 574
HpyAV CCTTC 2 cut(s) 151, 1016
HpyCH4III ACNGT 2 cut(s) 912, 1070
HpyCH4IV ACGT 2 cut(s) 1133, 1234
HpyCH4V TGCA 9 cut(s) 31, 131, 358, 655, 772, 835, 1018, 1073, 1148
HpyF3I CTNAG 1 cut(s) 454
HpySE526I ACGT 2 cut(s) 1133, 1234
Hsp92II CATG 1 cut(s) 364
KpnI GGTACC 1 cut(s) 368
Ksp22I TGATCA 1 cut(s) 808
Kzo9I GATC 7 cut(s) 15, 432, 505, 619, 706, 808, 854
LmnI GCTCC 3 cut(s) 13, 637, 1057
LweI GCATC 5 cut(s) 60, 382, 464, 642, 994
MaeI CTAG 4 cut(s) 551, 678, 864, 1052
MaeII ACGT 2 cut(s) 1133, 1234
MaeIII GTNAC 1 cut(s) 479
MalI GATC 7 cut(s) 17, 434, 507, 621, 708, 810, 856
MbiI CCGCTC 1 cut(s) 526
MboI GATC 7 cut(s) 15, 432, 505, 619, 706, 808, 854
MboII GAAGA 6 cut(s) 254, 284, 707, 751, 853, 1240
MfeI CAATTG 1 cut(s) 379
MflI RGATCY 1 cut(s) 505
MhlI GDGCHC 4 cut(s) 28, 312, 360, 970
MluCI AATT 7 cut(s) 379, 423, 499, 727, 777, 1186, 1217
MlyI GAGTC 4 cut(s) 269, 313, 459, 504
MmeI TCCRAC 4 cut(s) 283, 582, 615, 1136
Mph1103I ATGCAT 1 cut(s) 657
MroXI GAANNNNTTC 1 cut(s) 166
MslI CAYNNNNRTG 1 cut(s) 390
MspI CCGG 1 cut(s) 513
MspR9I CCNGG 3 cut(s) 569, 617, 941
MunI CAATTG 1 cut(s) 379
Mva1269I GAATGC 2 cut(s) 752, 850
MvaI CCWGG 3 cut(s) 569, 617, 941
MvnI CGCG 8 cut(s) 120, 253, 259, 350, 645, 692, 828, 996
NdeI CATATG 1 cut(s) 972
NdeII GATC 7 cut(s) 15, 432, 505, 619, 706, 808, 854
NlaIII CATG 1 cut(s) 364
NlaIV GGNNCC 4 cut(s) 9, 37, 366, 566
NmeAIII GCCGAG 3 cut(s) 68, 494, 673
NsbI TGCGCA 2 cut(s) 377, 396
NsiI ATGCAT 1 cut(s) 657
PaeR7I CTCGAG 2 cut(s) 234, 934
PcsI WCGNNNNNNNCGW 2 cut(s) 263, 1198
PctI GAATGC 2 cut(s) 752, 850
PdmI GAANNNNTTC 1 cut(s) 166
PfeI GAWTC 1 cut(s) 187
PfoI TCCNGGA 1 cut(s) 615
PinAI ACCGGT 1 cut(s) 512
PkrI GCNGC 4 cut(s) 694, 796, 850, 871
PleI GAGTC 4 cut(s) 269, 313, 458, 503
PpsI GAGTC 4 cut(s) 269, 313, 458, 503
PpuMI RGGWCCY 2 cut(s) 35, 564
Psp5II RGGWCCY 2 cut(s) 35, 564
Psp6I CCWGG 3 cut(s) 567, 615, 939
PspFI CCCAGC 2 cut(s) 888, 1007
PspGI CCWGG 3 cut(s) 567, 615, 939
PspN4I GGNNCC 4 cut(s) 9, 37, 366, 566
PspPI GGNCC 5 cut(s) 35, 564, 571, 613, 823
PspPPI RGGWCCY 2 cut(s) 35, 564
PsuI RGATCY 1 cut(s) 505
RsaI GTAC 1 cut(s) 366
RsaNI GTAC 1 cut(s) 365
RseI CAYNNNNRTG 1 cut(s) 390
SatI GCNGC 4 cut(s) 693, 795, 849, 870
Sau3AI GATC 7 cut(s) 15, 432, 505, 619, 706, 808, 854
Sau96I GGNCC 5 cut(s) 35, 564, 571, 613, 823
SchI GAGTC 4 cut(s) 269, 313, 459, 504
ScrFI CCNGG 3 cut(s) 569, 617, 941
SduI GDGCHC 4 cut(s) 28, 312, 360, 970
SfaNI GCATC 5 cut(s) 60, 382, 464, 642, 994
Sfr274I CTCGAG 2 cut(s) 234, 934
SinI GGWCC 5 cut(s) 35, 564, 571, 613, 823
SlaI CTCGAG 2 cut(s) 234, 934
SmiMI CAYNNNNRTG 1 cut(s) 390
SmlI CTYRAG 3 cut(s) 234, 488, 934
SmoI CTYRAG 3 cut(s) 234, 488, 934
Sse9I AATT 7 cut(s) 379, 423, 499, 727, 777, 1186, 1217
SsiI CCGC 8 cut(s) 118, 461, 526, 692, 795, 826, 848, 869
SspMI CTAG 4 cut(s) 551, 678, 864, 1052
StyD4I CCNGG 3 cut(s) 567, 615, 939
TaaI ACNGT 2 cut(s) 912, 1070
TaiI ACGT 2 cut(s) 1136, 1237
TaqI TCGA 5 cut(s) 210, 235, 435, 630, 935
TasI AATT 7 cut(s) 379, 423, 499, 727, 777, 1186, 1217
TauI GCSGC 4 cut(s) 695, 797, 851, 872
TfiI GAWTC 1 cut(s) 187
TscAI CASTG 5 cut(s) 25, 142, 448, 462, 1075
TspDTI ATGAA 1 cut(s) 167
TspGWI ACGGA 2 cut(s) 938, 1190
TspRI CASTG 5 cut(s) 25, 142, 448, 462, 1075
VneI GTGCAC 1 cut(s) 356
VpaK11BI GGWCC 5 cut(s) 35, 564, 571, 613, 823
XagI CCTNNNNNAGG 1 cut(s) 554
XapI RAATTY 2 cut(s) 1186, 1217
XhoI CTCGAG 2 cut(s) 234, 934
XmnI GAANNNNTTC 1 cut(s) 166
XspI CTAG 4 cut(s) 551, 678, 864, 1052
Zsp2I ATGCAT 1 cut(s) 657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.