Rroxscaffold_6G00423110

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000075
Physical Location & Seq
Forward (+)
44011900 .. 44013098
1199 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00423110.1

Sequence Viewer

Length: 999 bp
ATGGTTGCTAATCCGTGTAATTGCCATCATGATCGCAACCGTGTGAATACCGAGGATCCTCACCTTGGTATTGGTATCCCAAGGGAGAGCCCAAGAGAGACCGACAGGCTAAATGACGAGAGGGAGTGGGTGTGCAAGCTCCAAGATTCATTGGATCGCGGCCGTGAGAGCAAGGAGATGAGGCGGGCGATCGAAAATGGGATCGCGAGGTGGATGGAATTGGAGCAATCACTTGCGGTGGAGGGGTCTCGTCGTAGGGAGGCGAGAGGACGTTGTTGCCCATTTGAGGGAGTCAAACCTGGACTTGACAGTAATTTGCAACAAGCCGAGGCTGTTTTGAAAGCCCCGGAGGAGGTTAGGACCCGAGTTCGTGTTGCCAAGGAACGTTTGCAAGAGTTGGAGAGGCAATTGGAGCTTCACAACCCGGCTTTGGAGAGTTTGGCTCCTTATCCTAATCACGCCGTGGAATCGGGAGGGCAGGTCGGTACTTTGCAAGGAGAAATTGACCGTCCGAGGGTTGTTGAGAGCCAAGTCGGGCGAGAGGGAGGCGAGCCGGAACAATTAAGGAAGGAGTTGAGTGAGCAGCAGACTCGGGCCAATACCTTCGCCGAGGAGTGCATTGGACTACATTCCGCCGCCGAGACGCATTTTGACAAGTTCAAAAAGGCCAAGCGAGATGGTGCGGCCAAGGCGGTGGATCACTATCTTCCGTCAACCGACTTTCAAGAGAAGATAAATAAGGCTTTCTTGGATGAGGCCCTCCACTCAATCCATGATGGTATCGCCGCCGGCTGGATTGATCATGAAAAAATGGTCCCCAATATACGTGCGAAGAAAGCAGCGAGATCGCAAACCGGTGACGTGAGTGGCGTAGCTGCGGGGATTATTATCCGCGAACCGGCTATCGCCAAGGAGCTCGTCTCGAGCGGGCGGCAATCGCGATATCGAGGGTACCGATATGGACGAACAAGGGGAAGCACGCATAGATGCCGAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

332

Amino Acids

37.34

Weight (kDa)

8.14

Isoelectric Point (pI)

51.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 469
Acc65I GGTACC 1 cut(s) 951
AccB1I GGYRCC 1 cut(s) 951
AccBSI CCGCTC 1 cut(s) 927
AccII CGCG 4 cut(s) 159, 206, 894, 940
AclI AACGTT 1 cut(s) 385
AclWI GGATC 5 cut(s) 50, 63, 162, 209, 705
AcoI YGGCCR 2 cut(s) 160, 684
AdeI CACNNNGTG 1 cut(s) 463
AfaI GTAC 2 cut(s) 487, 953
AfiI CCNNNNNNNGG 8 cut(s) 65, 286, 287, 352, 430, 514, 792, 898
AgeI ACCGGT 1 cut(s) 854
AgsI TTSAA 3 cut(s) 340, 661, 725
AjiI CACGTC 1 cut(s) 862
AjnI CCWGG 1 cut(s) 298
AluBI AGCT 4 cut(s) 139, 415, 875, 916
AluI AGCT 4 cut(s) 139, 415, 875, 916
Alw21I GWGCWC 1 cut(s) 918
Alw26I GTCTC 4 cut(s) 92, 252, 635, 925
AlwI GGATC 5 cut(s) 50, 63, 162, 209, 705
Ama87I CYCGRG 3 cut(s) 363, 591, 922
AoxI GGCC 5 cut(s) 160, 594, 666, 684, 756
ApeKI GCWGC 3 cut(s) 583, 839, 875
AsiGI ACCGGT 1 cut(s) 854
Asp718I GGTACC 1 cut(s) 951
AspS9I GGNCC 4 cut(s) 360, 594, 757, 814
AsuC2I CCSGG 2 cut(s) 347, 425
AsuHPI GGTGA 2 cut(s) 53, 869
AvaI CYCGRG 3 cut(s) 363, 591, 922
AvaII GGWCC 2 cut(s) 360, 814
BamHI GGATCC 1 cut(s) 55
BanI GGYRCC 1 cut(s) 951
BanII GRGCYC 2 cut(s) 92, 918
Bbv12I GWGCWC 1 cut(s) 918
BbvI GCAGC 3 cut(s) 595, 851, 862
BccI CCATC 4 cut(s) 33, 208, 671, 770
BceAI ACGGC 2 cut(s) 147, 446
BcgI CGANNNNNNTGC 4 cut(s) 572, 606, 828, 862
BciT130I CCWGG 1 cut(s) 300
BciVI GTATCC 1 cut(s) 86
BclI TGATCA 1 cut(s) 799
BcnI CCSGG 2 cut(s) 347, 425
BcoDI GTCTC 4 cut(s) 92, 252, 635, 925
BfuAI ACCTGC 1 cut(s) 469
BfuI GTATCC 1 cut(s) 86
BisI GCNGC 8 cut(s) 160, 584, 636, 684, 786, 840, 876, 932
BlsI GCNGC 8 cut(s) 161, 585, 637, 685, 787, 841, 877, 933
Bme1390I CCNGG 3 cut(s) 300, 347, 425
Bme18I GGWCC 2 cut(s) 360, 814
BmeT110I CYCGRG 3 cut(s) 363, 591, 922
BmgBI CACGTC 1 cut(s) 862
BmgT120I GGNCC 4 cut(s) 360, 594, 757, 814
BmiI GGNNCC 5 cut(s) 57, 362, 444, 816, 953
BmrFI CCNGG 3 cut(s) 300, 347, 425
BmsI GCATC 1 cut(s) 977
BplI GAGNNNNNCTC 4 cut(s) 427, 459, 905, 937
BpuMI CCSGG 2 cut(s) 347, 425
BsaAI YACGTR 1 cut(s) 827
BsaBI GATNNNNATC 2 cut(s) 702, 887
BsaI GGTCTC 2 cut(s) 92, 252
BsaWI WCCGGW 1 cut(s) 854
BsaXI ACNNNNNCTCC 4 cut(s) 116, 146, 465, 495
Bsc4I CCNNNNNNNGG 8 cut(s) 65, 286, 287, 352, 430, 514, 792, 898
Bse118I RCCGGY 3 cut(s) 788, 854, 898
Bse8I GATNNNNATC 2 cut(s) 702, 887
BseBI CCWGG 1 cut(s) 300
BseGI GGATG 2 cut(s) 219, 757
BseJI GATNNNNATC 2 cut(s) 702, 887
BseLI CCNNNNNNNGG 8 cut(s) 65, 286, 287, 352, 430, 514, 792, 898
BseRI GAGGAG 2 cut(s) 365, 626
BseX3I CGGCCG 1 cut(s) 160
BseXI GCAGC 3 cut(s) 595, 851, 862
Bsh1236I CGCG 4 cut(s) 159, 206, 894, 940
Bsh1285I CGRYCG 2 cut(s) 163, 192
BshFI GGCC 5 cut(s) 162, 596, 668, 686, 758
BshNI GGYRCC 1 cut(s) 951
BshTI ACCGGT 1 cut(s) 854
BsiEI CGRYCG 2 cut(s) 163, 192
BsiHKAI GWGCWC 1 cut(s) 918
BsiHKCI CYCGRG 3 cut(s) 363, 591, 922
BsiSI CCGG 6 cut(s) 347, 425, 554, 789, 855, 899
BslFI GGGAC 1 cut(s) 800
BslI CCNNNNNNNGG 8 cut(s) 65, 286, 287, 352, 430, 514, 792, 898
BsmAI GTCTC 4 cut(s) 92, 252, 635, 925
BsmBI CGTCTC 2 cut(s) 635, 925
BsmFI GGGAC 1 cut(s) 800
BsnI GGCC 5 cut(s) 162, 596, 668, 686, 758
Bso31I GGTCTC 2 cut(s) 92, 252
BsoBI CYCGRG 3 cut(s) 363, 591, 922
Bsp1286I GDGCHC 2 cut(s) 92, 918
Bsp143I GATC 8 cut(s) 31, 55, 154, 189, 201, 697, 799, 845
Bsp68I TCGCGA 2 cut(s) 206, 940
BspANI GGCC 5 cut(s) 162, 596, 668, 686, 758
BspFNI CGCG 4 cut(s) 159, 206, 894, 940
BspHI TCATGA 2 cut(s) 28, 802
BspLI GGNNCC 5 cut(s) 57, 362, 444, 816, 953
BspMI ACCTGC 1 cut(s) 469
BspPI GGATC 5 cut(s) 50, 63, 162, 209, 705
BspT107I GGYRCC 1 cut(s) 951
BspTNI GGTCTC 2 cut(s) 92, 252
BsrBI CCGCTC 1 cut(s) 927
BsrFI RCCGGY 3 cut(s) 788, 854, 898
BssAI RCCGGY 3 cut(s) 788, 854, 898
BssMI GATC 8 cut(s) 31, 55, 154, 189, 201, 697, 799, 845
BssT1I CCWWGG 5 cut(s) 64, 80, 378, 687, 909
Bst2UI CCWGG 1 cut(s) 300
Bst4CI ACNGT 3 cut(s) 41, 311, 509
BstBAI YACGTR 1 cut(s) 827
BstC8I GCNNGC 6 cut(s) 137, 186, 551, 790, 929, 980
BstDSI CCRYGG 1 cut(s) 462
BstF5I GGATG 2 cut(s) 219, 757
BstFNI CGCG 4 cut(s) 159, 206, 894, 940
BstKTI GATC 8 cut(s) 34, 58, 157, 192, 204, 700, 802, 848
BstMAI GTCTC 4 cut(s) 92, 252, 635, 925
BstMBI GATC 8 cut(s) 31, 55, 154, 189, 201, 697, 799, 845
BstMCI CGRYCG 2 cut(s) 163, 192
BstMWI GCNNNNNNNGC 5 cut(s) 168, 412, 689, 836, 937
BstNI CCWGG 1 cut(s) 300
BstSCI CCNGG 3 cut(s) 298, 345, 423
BstUI CGCG 4 cut(s) 159, 206, 894, 940
BstV1I GCAGC 3 cut(s) 595, 851, 862
BstX2I RGATCY 1 cut(s) 55
BstXI CCANNNNNNTGG 1 cut(s) 694
BstYI RGATCY 1 cut(s) 55
BstZI CGGCCG 1 cut(s) 160
BsuI GTATCC 1 cut(s) 86
BsuRI GGCC 5 cut(s) 162, 596, 668, 686, 758
BtgI CCRYGG 1 cut(s) 462
BtrI CACGTC 1 cut(s) 862
BtsCI GGATG 2 cut(s) 219, 757
BtuMI TCGCGA 2 cut(s) 206, 940
BveI ACCTGC 1 cut(s) 469
Cac8I GCNNGC 6 cut(s) 137, 186, 551, 790, 929, 980
CciI TCATGA 2 cut(s) 28, 802
Cfr10I RCCGGY 3 cut(s) 788, 854, 898
Cfr13I GGNCC 4 cut(s) 360, 594, 757, 814
CseI GACGC 1 cut(s) 652
Csp6I GTAC 2 cut(s) 486, 952
CspAI ACCGGT 1 cut(s) 854
CviAII CATG 3 cut(s) 29, 773, 803
CviQI GTAC 2 cut(s) 486, 952
DpnI GATC 8 cut(s) 33, 57, 156, 191, 203, 699, 801, 847
DpnII GATC 8 cut(s) 31, 55, 154, 189, 201, 697, 799, 845
DraIII CACNNNGTG 1 cut(s) 463
EaeI YGGCCR 2 cut(s) 160, 684
EagI CGGCCG 1 cut(s) 160
EciI GGCGGA 1 cut(s) 622
Ecl136II GAGCTC 1 cut(s) 916
EclXI CGGCCG 1 cut(s) 160
Eco130I CCWWGG 5 cut(s) 64, 80, 378, 687, 909
Eco24I GRGCYC 2 cut(s) 92, 918
Eco31I GGTCTC 2 cut(s) 92, 252
Eco32I GATATC 1 cut(s) 944
Eco47I GGWCC 2 cut(s) 360, 814
Eco52I CGGCCG 1 cut(s) 160
Eco53kI GAGCTC 1 cut(s) 916
Eco88I CYCGRG 3 cut(s) 363, 591, 922
EcoICRI GAGCTC 1 cut(s) 916
EcoO109I RGGNCCY 2 cut(s) 360, 757
EcoRII CCWGG 1 cut(s) 298
EcoRV GATATC 1 cut(s) 944
EcoT14I CCWWGG 5 cut(s) 64, 80, 378, 687, 909
EcoT38I GRGCYC 2 cut(s) 92, 918
ErhI CCWWGG 5 cut(s) 64, 80, 378, 687, 909
Esp3I CGTCTC 2 cut(s) 635, 925
FaeI CATG 3 cut(s) 32, 776, 806
FaiI YATR 6 cut(s) 30, 774, 804, 824, 960, 984
FalI AAGNNNNNCTT 2 cut(s) 731, 763
FaqI GGGAC 1 cut(s) 800
FatI CATG 3 cut(s) 28, 772, 802
FauI CCCGC 3 cut(s) 177, 871, 920
FbaI TGATCA 1 cut(s) 799
Fnu4HI GCNGC 8 cut(s) 160, 584, 636, 684, 786, 840, 876, 932
FokI GGATG 2 cut(s) 226, 764
FriOI GRGCYC 2 cut(s) 92, 918
Fsp4HI GCNGC 8 cut(s) 160, 584, 636, 684, 786, 840, 876, 932
GluI GCNGC 8 cut(s) 160, 584, 636, 684, 786, 840, 876, 932
HaeIII GGCC 5 cut(s) 162, 596, 668, 686, 758
HapII CCGG 6 cut(s) 347, 425, 554, 789, 855, 899
HgaI GACGC 1 cut(s) 652
Hin1II CATG 3 cut(s) 32, 776, 806
HincII GTYRAC 1 cut(s) 714
HindII GTYRAC 1 cut(s) 714
HinfI GANTC 4 cut(s) 146, 291, 467, 589
HpaII CCGG 6 cut(s) 347, 425, 554, 789, 855, 899
HphI GGTGA 2 cut(s) 53, 869
Hpy166II GTNNAC 1 cut(s) 714
Hpy188I TCNGA 1 cut(s) 513
Hpy188III TCNNGA 7 cut(s) 29, 205, 471, 725, 803, 922, 939
Hpy8I GTNNAC 1 cut(s) 714
Hpy99I CGWCG 1 cut(s) 255
HpyAV CCTTC 2 cut(s) 562, 613
HpyCH4III ACNGT 3 cut(s) 41, 311, 509
HpyCH4IV ACGT 4 cut(s) 271, 385, 826, 861
HpyCH4V TGCA 5 cut(s) 135, 319, 391, 493, 618
HpyF10VI GCNNNNNNNGC 5 cut(s) 168, 412, 689, 836, 937
HpySE526I ACGT 4 cut(s) 271, 385, 826, 861
Hsp92II CATG 3 cut(s) 32, 776, 806
KpnI GGTACC 1 cut(s) 955
KroI GCCGGC 1 cut(s) 788
KroNI GCCGGC 1 cut(s) 790
Ksp22I TGATCA 1 cut(s) 799
Kzo9I GATC 8 cut(s) 31, 55, 154, 189, 201, 697, 799, 845
LmnI GCTCC 5 cut(s) 144, 223, 412, 448, 913
Lsp1109I GCAGC 3 cut(s) 595, 851, 862
LweI GCATC 1 cut(s) 977
MaeII ACGT 4 cut(s) 271, 385, 826, 861
MaeIII GTNAC 1 cut(s) 857
MalI GATC 8 cut(s) 33, 57, 156, 191, 203, 699, 801, 847
MbiI CCGCTC 1 cut(s) 927
MboI GATC 8 cut(s) 31, 55, 154, 189, 201, 697, 799, 845
MboII GAAGA 3 cut(s) 698, 742, 844
MfeI CAATTG 1 cut(s) 407
MflI RGATCY 1 cut(s) 55
MhlI GDGCHC 2 cut(s) 92, 918
MluCI AATT 6 cut(s) 19, 218, 313, 407, 501, 560
MlyI GAGTC 2 cut(s) 300, 583
MmeI TCCRAC 1 cut(s) 378
MroNI GCCGGC 1 cut(s) 788
MseI TTAA 1 cut(s) 563
MspI CCGG 6 cut(s) 347, 425, 554, 789, 855, 899
MspR9I CCNGG 3 cut(s) 300, 347, 425
MunI CAATTG 1 cut(s) 407
MvaI CCWGG 1 cut(s) 300
MvnI CGCG 4 cut(s) 159, 206, 894, 940
MwoI GCNNNNNNNGC 5 cut(s) 168, 412, 689, 836, 937
NaeI GCCGGC 1 cut(s) 790
NciI CCSGG 2 cut(s) 347, 425
NdeII GATC 8 cut(s) 31, 55, 154, 189, 201, 697, 799, 845
NgoMIV GCCGGC 1 cut(s) 788
NlaIII CATG 3 cut(s) 32, 776, 806
NlaIV GGNNCC 5 cut(s) 57, 362, 444, 816, 953
NmeAIII GCCGAG 3 cut(s) 352, 634, 664
NmuCI GTSAC 1 cut(s) 857
NruI TCGCGA 2 cut(s) 206, 940
PaeR7I CTCGAG 1 cut(s) 922
PagI TCATGA 2 cut(s) 28, 802
PcsI WCGNNNNNNNCGW 2 cut(s) 867, 952
PdiI GCCGGC 1 cut(s) 790
PfeI GAWTC 2 cut(s) 146, 467
PinAI ACCGGT 1 cut(s) 854
PkrI GCNGC 8 cut(s) 161, 585, 637, 685, 787, 841, 877, 933
Ple19I CGATCG 1 cut(s) 192
PleI GAGTC 2 cut(s) 299, 583
PpsI GAGTC 2 cut(s) 299, 583
Ppu21I YACGTR 1 cut(s) 827
PpuMI RGGWCCY 1 cut(s) 360
Psp124BI GAGCTC 1 cut(s) 918
Psp1406I AACGTT 1 cut(s) 385
Psp5II RGGWCCY 1 cut(s) 360
Psp6I CCWGG 1 cut(s) 298
PspGI CCWGG 1 cut(s) 298
PspN4I GGNNCC 5 cut(s) 57, 362, 444, 816, 953
PspPI GGNCC 4 cut(s) 360, 594, 757, 814
PspPPI RGGWCCY 1 cut(s) 360
PsuI RGATCY 1 cut(s) 55
PvuI CGATCG 1 cut(s) 192
RruI TCGCGA 2 cut(s) 206, 940
RsaI GTAC 2 cut(s) 487, 953
RsaNI GTAC 2 cut(s) 486, 952
SacI GAGCTC 1 cut(s) 918
SaqAI TTAA 1 cut(s) 563
SatI GCNGC 8 cut(s) 160, 584, 636, 684, 786, 840, 876, 932
Sau3AI GATC 8 cut(s) 31, 55, 154, 189, 201, 697, 799, 845
Sau96I GGNCC 4 cut(s) 360, 594, 757, 814
SchI GAGTC 2 cut(s) 300, 583
ScrFI CCNGG 3 cut(s) 300, 347, 425
SduI GDGCHC 2 cut(s) 92, 918
SfaNI GCATC 1 cut(s) 977
Sfr274I CTCGAG 1 cut(s) 922
SinI GGWCC 2 cut(s) 360, 814
SlaI CTCGAG 1 cut(s) 922
SmlI CTYRAG 1 cut(s) 922
SmoI CTYRAG 1 cut(s) 922
Sse9I AATT 6 cut(s) 19, 218, 313, 407, 501, 560
SstI GAGCTC 1 cut(s) 918
StyD4I CCNGG 3 cut(s) 298, 345, 423
StyI CCWWGG 5 cut(s) 64, 80, 378, 687, 909
TaaI ACNGT 3 cut(s) 41, 311, 509
TaiI ACGT 4 cut(s) 274, 388, 829, 864
TaqI TCGA 3 cut(s) 192, 923, 946
TaqII GACCGA 1 cut(s) 116
TasI AATT 6 cut(s) 19, 218, 313, 407, 501, 560
TauI GCSGC 5 cut(s) 162, 638, 686, 788, 934
TfiI GAWTC 2 cut(s) 146, 467
Tru1I TTAA 1 cut(s) 563
Tru9I TTAA 1 cut(s) 563
TseFI GTSAC 1 cut(s) 857
TseI GCWGC 3 cut(s) 583, 839, 875
Tsp45I GTSAC 1 cut(s) 857
TspDTI ATGAA 2 cut(s) 138, 819
TspGWI ACGGA 1 cut(s) 699
VpaK11BI GGWCC 2 cut(s) 360, 814
XhoI CTCGAG 1 cut(s) 922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.