Rmu_sc0002250.1_g000013

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002250.1
OG0000075
Physical Location & Seq
Forward (+)
68131 .. 71050
2920 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002250.1_g000013.1.cds

Sequence Viewer

Length: 2226 bp
atggcgcgtgagaacatcagtcgtggggagaaggtgcttctagcagtcgcggtggaggtggttcccggggagctagctagggcgattccagaggaagtggtgggggagttccccgtaggagtattgcggggagttctcgaggaagtggctagggttcgtctcgtggagttccgagtacggttgagcaacccgtggtggctgatgtgcctgaagcggagggtgttgaagtattggagatctcgcgttcgccacgggggcgattgctccttggcgctacgcccattgatcaaccgggtgtgggttgagcttcccgataccggaggagttgcagtatctgttgtcttgtctgaatgtagcggtagggtagctgtcgcccaatgcattgaggaaaataatgggagtattgctgctatggaagctaagcaagttgctgtgtcccaatatcggcgaggctcgcggccgtactgttatcaaggacttgccgtcgaatatctatgcgcattggcgggggaggccgtgcttagtaggcagccggtggtagaatcaggatatggtgcatcgagccccgagcttgttccaacccatctgcaggaggtggaggtgaccacgctggagaggaagagtgtggcgagggtgatgggtgcgtttcctaagggggcgagggggttctatcatctgtgtaggctcccgatatacgagagatttgatttggggaggtttccggcggatatgtcgaacgaggcccctagaaaaagtgacgccctatatgctaacatctatcccgataccattattcagggattgttgcaagaatcacagacggcaaggcgagtggatgttgacctgcctgataaagtgcgtgtgactgatcatcgggttagcatgtcgctgcccgatgagatgtatctgaggtttcccgatgccgtgctggagtatttcaatcaacgggccaaggaagaagctggtgttgaggggaatgagggtggcgttgctcgggaacggactcgagatgtccaggggccacccacgcaagctggtgaggcgagtaagcatccccaagtgcatggtggtgagcttcagtcccccgagactcgagaagtaacgaggcagtcctccctggtcctggcaggaggggagggtcttggtgacgtggcttgggtctcaaagcccacggtggaggtggatatttcattcaaggatttgctggaggaggtggagcggcttcaaagctatacaagtgctcgtgctcgtttgcgggaagtgattaaggtggacaacatagaggcgaaggtgaccagccaggctgttggtgagacaggcctgaaggttgaggttcctgaggtgcaacctgagcctgcggggggtatcatcgaggttgcccaagttacagagacggggacccctgatggcgagggggagggagcccgagtgtcggacacgtgtgcccatacagatggggtcggattgaggaaaaggaccgccttgcagctttgtctcgagagtcccccagttggtgtcgcttgggacactcatggtatagctggcggtctcgcgctcaccctgggcgagatcagaattactgatggtgccatccttcatatggttgccaacttgcggaactatcattgcaggagatccatgcctagggtatcgggaggctcaggagaggctgatgaggtgcaggatgtgaacctgaattaccacgcctctagcgagttggtggctcattttgatggggagattgtgcggttgggaggggagctggaagccgagaaggaacggacgcgcgagcttcagagttcaatggactatgacctggtggagctcgaggatatgaggcgagtaatcgatgaagggattgcgaggaggatggagctggaacgagcacttgccatagaggaggctcgtcgtcaagaggctgagggtactattgccccactgaaggaggccaatctggagctaactgggaagctgcagcgggcggaggatggtatgaggttggtggggcaggttagagccgggcttcgcgctgctgccttggagagtttggctccctatccagatcgggtggtagatttagaggggcaggttgggaatctgcagagggaggtggaccgtttacgggatgtggagctggaagcaggcgagagggaggcagagatggagcggttcaggaaggagttagccgagcaacgggctcgatcgagtgacttcgccgaggagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

741

Amino Acids

81.71

Weight (kDa)

5.12

Isoelectric Point (pI)

45.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 499
Acc36I ACCTGC 3 cut(s) 852, 1999, 2077
AccB1I GGYRCC 1 cut(s) 1586
AccBSI CCGCTC 2 cut(s) 1219, 2167
AccII CGCG 8 cut(s) 7, 50, 243, 457, 1553, 1786, 1788, 2028
AclWI GGATC 1 cut(s) 1629
AcoI YGGCCR 1 cut(s) 458
AcuI CTGAAG 5 cut(s) 230, 1061, 1343, 1778, 1961
AcvI CACGTG 1 cut(s) 1440
AcyI GRCGYC 1 cut(s) 759
AfaI GTAC 3 cut(s) 177, 464, 1927
AflIII ACRYGT 2 cut(s) 1437, 1439
AgsI TTSAA 5 cut(s) 226, 940, 1195, 1226, 1803
AhdI GACNNNNNGTC 1 cut(s) 482
AjiI CACGTC 1 cut(s) 1150
AjnI CCWGG 6 cut(s) 1014, 1116, 1122, 1299, 1560, 1815
Alw21I GWGCWC 4 cut(s) 1243, 1249, 1827, 1888
Alw26I GTCTC 7 cut(s) 164, 1082, 1165, 1307, 1385, 1499, 1553
AlwI GGATC 1 cut(s) 1629
AlwNI CAGNNNCTG 1 cut(s) 335
AoxI GGCC 7 cut(s) 458, 513, 741, 948, 1019, 1318, 1947
ApeKI GCWGC 8 cut(s) 407, 529, 889, 1486, 1972, 1975, 2030, 2033
AspA2I CCTAGG 1 cut(s) 1643
AspLEI GCGC 6 cut(s) 7, 274, 500, 1555, 1788, 2030
AspS9I GGNCC 7 cut(s) 742, 948, 1019, 1120, 1398, 1476, 2113
AsuC2I CCSGG 4 cut(s) 66, 67, 293, 2020
AsuHPI GGTGA 8 cut(s) 613, 646, 1049, 1082, 1157, 1303, 1322, 1549
AsuNHI GCTAGC 1 cut(s) 73
AvaII GGWCC 4 cut(s) 1120, 1398, 1476, 2113
AvrII CCTAGG 1 cut(s) 1643
AxyI CCTNAGG 2 cut(s) 651, 1338
BaeGI GKGCMC 1 cut(s) 1447
BanI GGYRCC 1 cut(s) 1586
BanII GRGCYC 4 cut(s) 566, 1426, 1827, 2200
BauI CACGAG 2 cut(s) 161, 1242
BbrPI CACGTG 1 cut(s) 1440
Bbv12I GWGCWC 4 cut(s) 1243, 1249, 1827, 1888
BbvCI CCTCAGC 1 cut(s) 1920
BbvI GCAGC 8 cut(s) 394, 541, 876, 1498, 1959, 1987, 2017, 2020
BceAI ACGGC 5 cut(s) 445, 467, 500, 837, 908
BcgI CGANNNNNNTGC 2 cut(s) 2180, 2214
BciT130I CCWGG 6 cut(s) 1016, 1118, 1124, 1301, 1562, 1817
BclI TGATCA 2 cut(s) 285, 868
BcnI CCSGG 4 cut(s) 66, 67, 293, 2020
BcoDI GTCTC 7 cut(s) 164, 1082, 1165, 1307, 1385, 1499, 1553
BfaI CTAG 7 cut(s) 41, 74, 78, 150, 747, 1644, 1710
BfmI CTRYAG 3 cut(s) 587, 1973, 2099
BfoI RGCGCY 1 cut(s) 275
BfuAI ACCTGC 3 cut(s) 852, 1999, 2077
BglI GCCNNNNNGGC 1 cut(s) 255
BglII AGATCT 1 cut(s) 236
BlnI CCTAGG 1 cut(s) 1643
BlpI GCTNAGC 1 cut(s) 420
Bme18I GGWCC 4 cut(s) 1120, 1398, 1476, 2113
BmeRI GACNNNNNGTC 1 cut(s) 482
BmgBI CACGTC 1 cut(s) 1150
BmgT120I GGNCC 7 cut(s) 742, 948, 1019, 1120, 1398, 1476, 2113
BmrI ACTGGG 2 cut(s) 1502, 1974
BmsI GCATC 3 cut(s) 566, 910, 1060
BmtI GCTAGC 1 cut(s) 77
BmuI ACTGGG 2 cut(s) 1502, 1974
BplI GAGNNNNNCTC 2 cut(s) 2035, 2067
BpmI CTGGAG 4 cut(s) 632, 950, 1226, 1976
Bpu10I CCTNAGC 3 cut(s) 1350, 1660, 1920
Bpu1102I GCTNAGC 1 cut(s) 420
BpuMI CCSGG 4 cut(s) 66, 67, 293, 2020
Bsa29I ATCGAT 1 cut(s) 1848
BsaAI YACGTR 1 cut(s) 1440
BsaHI GRCGYC 1 cut(s) 759
BsaI GGTCTC 2 cut(s) 1165, 1553
BsaWI WCCGGW 1 cut(s) 317
BsaXI ACNNNNNCTCC 4 cut(s) 315, 345, 1413, 1443
Bse118I RCCGGY 1 cut(s) 532
Bse1I ACTGG 2 cut(s) 1508, 1969
Bse21I CCTNAGG 2 cut(s) 651, 1338
Bse3DI GCAATG 1 cut(s) 1624
BseBI CCWGG 6 cut(s) 1016, 1118, 1124, 1301, 1562, 1817
BseCI ATCGAT 1 cut(s) 1848
BseGI GGATG 7 cut(s) 841, 1051, 1590, 1690, 1875, 1993, 2131
BseMI GCAATG 1 cut(s) 1624
BseMII CTCAG 5 cut(s) 899, 1329, 1341, 1674, 1911
BseNI ACTGG 2 cut(s) 1508, 1969
BseRI GAGGAG 4 cut(s) 336, 1223, 1879, 1913
BseSI GKGCMC 1 cut(s) 1447
BseX3I CGGCCG 1 cut(s) 458
BseXI GCAGC 8 cut(s) 394, 541, 876, 1498, 1959, 1987, 2017, 2020
BsgI GTGCAG 1 cut(s) 1700
Bsh1236I CGCG 8 cut(s) 7, 50, 243, 457, 1553, 1786, 1788, 2028
Bsh1285I CGRYCG 2 cut(s) 461, 2204
BshFI GGCC 7 cut(s) 460, 515, 743, 950, 1021, 1320, 1949
BshNI GGYRCC 1 cut(s) 1586
BshVI ATCGAT 1 cut(s) 1848
BsiEI CGRYCG 2 cut(s) 461, 2204
BsiHKAI GWGCWC 4 cut(s) 1243, 1249, 1827, 1888
BsiSI CCGG 6 cut(s) 66, 292, 318, 533, 722, 2019
BslFI GGGAC 5 cut(s) 421, 1066, 1411, 1488, 1538
BsmAI GTCTC 7 cut(s) 164, 1082, 1165, 1307, 1385, 1499, 1553
BsmBI CGTCTC 2 cut(s) 164, 1385
BsmFI GGGAC 5 cut(s) 421, 1066, 1411, 1488, 1538
BsnI GGCC 7 cut(s) 460, 515, 743, 950, 1021, 1320, 1949
Bso31I GGTCTC 2 cut(s) 1165, 1553
Bsp1286I GDGCHC 8 cut(s) 566, 1243, 1249, 1426, 1447, 1827, 1888, 2200
Bsp143I GATC 7 cut(s) 236, 285, 868, 1569, 1634, 2062, 2201
Bsp1720I GCTNAGC 1 cut(s) 420
BspANI GGCC 7 cut(s) 460, 515, 743, 950, 1021, 1320, 1949
BspCNI CTCAG 5 cut(s) 900, 1330, 1342, 1673, 1912
BspDI ATCGAT 1 cut(s) 1848
BspFNI CGCG 8 cut(s) 7, 50, 243, 457, 1553, 1786, 1788, 2028
BspMAI CTGCAG 3 cut(s) 591, 1977, 2103
BspMI ACCTGC 3 cut(s) 852, 1999, 2077
BspOI GCTAGC 1 cut(s) 77
BspPI GGATC 1 cut(s) 1629
BspT107I GGYRCC 1 cut(s) 1586
BspTNI GGTCTC 2 cut(s) 1165, 1553
BsrBI CCGCTC 2 cut(s) 1219, 2167
BsrDI GCAATG 1 cut(s) 1624
BsrFI RCCGGY 1 cut(s) 532
BsrI ACTGG 2 cut(s) 1508, 1969
BssAI RCCGGY 1 cut(s) 532
BssMI GATC 7 cut(s) 236, 285, 868, 1569, 1634, 2062, 2201
BssNI GRCGYC 1 cut(s) 759
BssSI CACGAG 2 cut(s) 161, 1242
BssT1I CCWWGG 4 cut(s) 267, 951, 1643, 2037
Bst2BI CACGAG 2 cut(s) 161, 1242
Bst2UI CCWGG 6 cut(s) 1016, 1118, 1124, 1301, 1562, 1817
Bst4CI ACNGT 4 cut(s) 180, 467, 1174, 2117
Bst6I CTCTTC 1 cut(s) 614
BstACI GRCGYC 1 cut(s) 759
BstBAI YACGTR 1 cut(s) 1440
BstC8I GCNNGC 8 cut(s) 75, 455, 1032, 1356, 1543, 1790, 1980, 2143
BstDEI CTNAG 8 cut(s) 420, 521, 651, 908, 1338, 1350, 1660, 1920
BstDSI CCRYGG 3 cut(s) 191, 250, 1170
BstEII GGTNACC 2 cut(s) 601, 1291
BstF5I GGATG 7 cut(s) 841, 1051, 1590, 1690, 1875, 1993, 2131
BstFNI CGCG 8 cut(s) 7, 50, 243, 457, 1553, 1786, 1788, 2028
BstH2I RGCGCY 1 cut(s) 275
BstHHI GCGC 6 cut(s) 7, 274, 500, 1555, 1788, 2030
BstKTI GATC 7 cut(s) 239, 288, 871, 1572, 1637, 2065, 2204
BstMAI GTCTC 7 cut(s) 164, 1082, 1165, 1307, 1385, 1499, 1553
BstMBI GATC 7 cut(s) 236, 285, 868, 1569, 1634, 2062, 2201
BstMCI CGRYCG 2 cut(s) 461, 2204
BstMWI GCNNNNNNNGC 9 cut(s) 255, 416, 454, 512, 526, 767, 1027, 1040, 1351
BstNI CCWGG 6 cut(s) 1016, 1118, 1124, 1301, 1562, 1817
BstNSI RCATGY 1 cut(s) 886
BstPI GGTNACC 2 cut(s) 601, 1291
BstSFI CTRYAG 3 cut(s) 587, 1973, 2099
BstSLI GKGCMC 1 cut(s) 1447
BstUI CGCG 8 cut(s) 7, 50, 243, 457, 1553, 1786, 1788, 2028
BstV1I GCAGC 8 cut(s) 394, 541, 876, 1498, 1959, 1987, 2017, 2020
BstX2I RGATCY 2 cut(s) 236, 1634
BstXI CCANNNNNNTGG 3 cut(s) 1064, 1307, 1454
BstYI RGATCY 2 cut(s) 236, 1634
BstZI CGGCCG 1 cut(s) 458
Bsu15I ATCGAT 1 cut(s) 1848
Bsu36I CCTNAGG 2 cut(s) 651, 1338
BsuRI GGCC 7 cut(s) 460, 515, 743, 950, 1021, 1320, 1949
BsuTUI ATCGAT 1 cut(s) 1848
BtgI CCRYGG 3 cut(s) 191, 250, 1170
BtrI CACGTC 1 cut(s) 1150
BtsCI GGATG 7 cut(s) 841, 1051, 1590, 1690, 1875, 1993, 2131
BtsIMutI CAGTG 1 cut(s) 1937
BveI ACCTGC 3 cut(s) 852, 1999, 2077
Cac8I GCNNGC 8 cut(s) 75, 455, 1032, 1356, 1543, 1790, 1980, 2143
CaiI CAGNNNCTG 1 cut(s) 335
CfoI GCGC 6 cut(s) 7, 274, 500, 1555, 1788, 2030
Cfr10I RCCGGY 1 cut(s) 532
Cfr13I GGNCC 7 cut(s) 742, 948, 1019, 1120, 1398, 1476, 2113
Cfr9I CCCGGG 1 cut(s) 65
ClaI ATCGAT 1 cut(s) 1848
CseI GACGC 2 cut(s) 767, 1792
CsiI ACCWGGT 1 cut(s) 1815
Csp6I GTAC 3 cut(s) 176, 463, 1926
CspCI CAANNNNNGTGG 2 cut(s) 813, 848
CviAII CATG 4 cut(s) 883, 1064, 1532, 1639
CviQI GTAC 3 cut(s) 176, 463, 1926
DdeI CTNAG 8 cut(s) 420, 521, 651, 908, 1338, 1350, 1660, 1920
DpnI GATC 7 cut(s) 238, 287, 870, 1571, 1636, 2064, 2203
DpnII GATC 7 cut(s) 236, 285, 868, 1569, 1634, 2062, 2201
DriI GACNNNNNGTC 1 cut(s) 482
EaeI YGGCCR 1 cut(s) 458
EagI CGGCCG 1 cut(s) 458
Eam1104I CTCTTC 1 cut(s) 614
Eam1105I GACNNNNNGTC 1 cut(s) 482
EarI CTCTTC 1 cut(s) 614
EciI GGCGGA 2 cut(s) 740, 1997
Ecl136II GAGCTC 1 cut(s) 1825
EclXI CGGCCG 1 cut(s) 458
Eco130I CCWWGG 4 cut(s) 267, 951, 1643, 2037
Eco147I AGGCCT 1 cut(s) 1320
Eco24I GRGCYC 4 cut(s) 566, 1426, 1827, 2200
Eco31I GGTCTC 2 cut(s) 1165, 1553
Eco47I GGWCC 4 cut(s) 1120, 1398, 1476, 2113
Eco52I CGGCCG 1 cut(s) 458
Eco53kI GAGCTC 1 cut(s) 1825
Eco57I CTGAAG 5 cut(s) 230, 1061, 1343, 1778, 1961
Eco72I CACGTG 1 cut(s) 1440
Eco81I CCTNAGG 2 cut(s) 651, 1338
Eco91I GGTNACC 2 cut(s) 601, 1291
EcoICRI GAGCTC 1 cut(s) 1825
EcoO109I RGGNCCY 2 cut(s) 742, 1398
EcoO65I GGTNACC 2 cut(s) 601, 1291
EcoRII CCWGG 6 cut(s) 1014, 1116, 1122, 1299, 1560, 1815
EcoT14I CCWWGG 4 cut(s) 267, 951, 1643, 2037
EcoT22I ATGCAT 1 cut(s) 383
EcoT38I GRGCYC 4 cut(s) 566, 1426, 1827, 2200
ErhI CCWWGG 4 cut(s) 267, 951, 1643, 2037
Esp3I CGTCTC 2 cut(s) 164, 1385
FaeI CATG 4 cut(s) 886, 1067, 1535, 1642
FaqI GGGAC 5 cut(s) 421, 1066, 1411, 1488, 1538
FatI CATG 4 cut(s) 882, 1063, 1531, 1638
FauI CCCGC 5 cut(s) 120, 499, 1248, 1351, 1971
FauNDI CATATG 1 cut(s) 1599
FbaI TGATCA 2 cut(s) 285, 868
FokI GGATG 7 cut(s) 848, 1038, 1577, 1697, 1882, 2000, 2138
FriOI GRGCYC 4 cut(s) 566, 1426, 1827, 2200
FspAI RTGCGCAY 1 cut(s) 499
FspBI CTAG 7 cut(s) 41, 74, 78, 150, 747, 1644, 1710
FspI TGCGCA 1 cut(s) 499
GlaI GCGC 6 cut(s) 6, 273, 499, 1554, 1787, 2029
GsuI CTGGAG 4 cut(s) 632, 950, 1226, 1976
HaeII RGCGCY 1 cut(s) 275
HaeIII GGCC 7 cut(s) 460, 515, 743, 950, 1021, 1320, 1949
HapII CCGG 6 cut(s) 66, 292, 318, 533, 722, 2019
HgaI GACGC 2 cut(s) 767, 1792
HhaI GCGC 6 cut(s) 7, 274, 500, 1555, 1788, 2030
Hin1I GRCGYC 1 cut(s) 759
Hin1II CATG 4 cut(s) 886, 1067, 1535, 1642
Hin6I GCGC 6 cut(s) 5, 272, 498, 1553, 1786, 2028
HinP1I GCGC 6 cut(s) 5, 272, 498, 1553, 1786, 2028
HincII GTYRAC 1 cut(s) 841
HindII GTYRAC 1 cut(s) 841
HinfI GANTC 7 cut(s) 85, 542, 812, 1003, 1090, 1501, 2095
HpaII CCGG 6 cut(s) 66, 292, 318, 533, 722, 2019
HphI GGTGA 8 cut(s) 613, 646, 1049, 1082, 1157, 1303, 1322, 1549
Hpy166II GTNNAC 5 cut(s) 841, 1273, 1690, 2113, 2120
Hpy188I TCNGA 7 cut(s) 173, 349, 909, 1435, 1463, 1574, 1797
Hpy8I GTNNAC 5 cut(s) 841, 1273, 1690, 2113, 2120
Hpy99I CGWCG 2 cut(s) 488, 1911
HpyAV CCTTC 8 cut(s) 25, 1282, 1318, 1604, 1768, 1847, 1936, 2170
HpyCH4III ACNGT 4 cut(s) 180, 467, 1174, 2117
HpyCH4IV ACGT 2 cut(s) 1149, 1439
HpyF10VI GCNNNNNNNGC 9 cut(s) 255, 416, 454, 512, 526, 767, 1027, 1040, 1351
HpyF3I CTNAG 8 cut(s) 420, 521, 651, 908, 1338, 1350, 1660, 1920
HpySE526I ACGT 2 cut(s) 1149, 1439
Hsp92I GRCGYC 1 cut(s) 759
Hsp92II CATG 4 cut(s) 886, 1067, 1535, 1642
HspAI GCGC 6 cut(s) 5, 272, 498, 1553, 1786, 2028
KflI GGGWCCC 1 cut(s) 1398
Ksp22I TGATCA 2 cut(s) 285, 868
Kzo9I GATC 7 cut(s) 236, 285, 868, 1569, 1634, 2062, 2201
Lsp1109I GCAGC 8 cut(s) 394, 541, 876, 1498, 1959, 1987, 2017, 2020
LweI GCATC 3 cut(s) 566, 910, 1060
MabI ACCWGGT 1 cut(s) 1815
MaeI CTAG 7 cut(s) 41, 74, 78, 150, 747, 1644, 1710
MaeII ACGT 2 cut(s) 1149, 1439
MaeIII GTNAC 8 cut(s) 601, 755, 862, 1099, 1145, 1291, 1384, 2207
MalI GATC 7 cut(s) 238, 287, 870, 1571, 1636, 2064, 2203
MbiI CCGCTC 2 cut(s) 1219, 2167
MboI GATC 7 cut(s) 236, 285, 868, 1569, 1634, 2062, 2201
MboII GAAGA 2 cut(s) 631, 968
MflI RGATCY 2 cut(s) 236, 1634
MhlI GDGCHC 8 cut(s) 566, 1243, 1249, 1426, 1447, 1827, 1888, 2200
MluCI AATT 2 cut(s) 1575, 1696
MlyI GAGTC 3 cut(s) 997, 1084, 1510
MmeI TCCRAC 3 cut(s) 602, 1413, 1441
Mph1103I ATGCAT 1 cut(s) 383
MseI TTAA 1 cut(s) 1266
MslI CAYNNNNRTG 3 cut(s) 1068, 1452, 1731
MspA1I CMGCKG 1 cut(s) 1978
MspI CCGG 6 cut(s) 66, 292, 318, 533, 722, 2019
MvaI CCWGG 6 cut(s) 1016, 1118, 1124, 1301, 1562, 1817
MvnI CGCG 8 cut(s) 7, 50, 243, 457, 1553, 1786, 1788, 2028
MwoI GCNNNNNNNGC 9 cut(s) 255, 416, 454, 512, 526, 767, 1027, 1040, 1351
NciI CCSGG 4 cut(s) 66, 67, 293, 2020
NdeI CATATG 1 cut(s) 1599
NdeII GATC 7 cut(s) 236, 285, 868, 1569, 1634, 2062, 2201
NheI GCTAGC 1 cut(s) 73
NlaIII CATG 4 cut(s) 886, 1067, 1535, 1642
NmeAIII GCCGAG 2 cut(s) 1795, 2212
NmuCI GTSAC 6 cut(s) 601, 755, 862, 1145, 1291, 2207
NsbI TGCGCA 1 cut(s) 499
NsiI ATGCAT 1 cut(s) 383
NspI RCATGY 1 cut(s) 886
PaeR7I CTCGAG 5 cut(s) 137, 1005, 1092, 1496, 1826
PasI CCCWGGG 1 cut(s) 1561
PceI AGGCCT 1 cut(s) 1320
PcsI WCGNNNNNNNCGW 1 cut(s) 1710
PfeI GAWTC 4 cut(s) 85, 542, 812, 2095
Ple19I CGATCG 1 cut(s) 2204
PleI GAGTC 3 cut(s) 997, 1084, 1509
PmaCI CACGTG 1 cut(s) 1440
PmlI CACGTG 1 cut(s) 1440
PpsI GAGTC 3 cut(s) 997, 1084, 1509
Ppu21I YACGTR 1 cut(s) 1440
PpuMI RGGWCCY 1 cut(s) 1398
Psp124BI GAGCTC 1 cut(s) 1827
Psp5II RGGWCCY 1 cut(s) 1398
Psp6I CCWGG 6 cut(s) 1014, 1116, 1122, 1299, 1560, 1815
PspCI CACGTG 1 cut(s) 1440
PspEI GGTNACC 2 cut(s) 601, 1291
PspGI CCWGG 6 cut(s) 1014, 1116, 1122, 1299, 1560, 1815
PspPI GGNCC 7 cut(s) 742, 948, 1019, 1120, 1398, 1476, 2113
PspPPI RGGWCCY 1 cut(s) 1398
PspXI VCTCGAGB 1 cut(s) 1826
PsrI GAACNNNNNNTAC 2 cut(s) 1682, 1714
PstI CTGCAG 3 cut(s) 591, 1977, 2103
PstNI CAGNNNCTG 1 cut(s) 335
PsuI RGATCY 2 cut(s) 236, 1634
PvuI CGATCG 1 cut(s) 2204
RsaI GTAC 3 cut(s) 177, 464, 1927
RsaNI GTAC 3 cut(s) 176, 463, 1926
RseI CAYNNNNRTG 3 cut(s) 1068, 1452, 1731
SacI GAGCTC 1 cut(s) 1827
SaqAI TTAA 1 cut(s) 1266
Sau3AI GATC 7 cut(s) 236, 285, 868, 1569, 1634, 2062, 2201
Sau96I GGNCC 7 cut(s) 742, 948, 1019, 1120, 1398, 1476, 2113
SchI GAGTC 3 cut(s) 997, 1084, 1510
SduI GDGCHC 8 cut(s) 566, 1243, 1249, 1426, 1447, 1827, 1888, 2200
SexAI ACCWGGT 1 cut(s) 1815
SfaNI GCATC 3 cut(s) 566, 910, 1060
SfcI CTRYAG 3 cut(s) 587, 1973, 2099
Sfr274I CTCGAG 5 cut(s) 137, 1005, 1092, 1496, 1826
SinI GGWCC 4 cut(s) 1120, 1398, 1476, 2113
SlaI CTCGAG 5 cut(s) 137, 1005, 1092, 1496, 1826
SmaI CCCGGG 1 cut(s) 67
SmiMI CAYNNNNRTG 3 cut(s) 1068, 1452, 1731
SmlI CTYRAG 5 cut(s) 137, 1005, 1092, 1496, 1826
SmoI CTYRAG 5 cut(s) 137, 1005, 1092, 1496, 1826
Sse9I AATT 2 cut(s) 1575, 1696
SseBI AGGCCT 1 cut(s) 1320
SspMI CTAG 7 cut(s) 41, 74, 78, 150, 747, 1644, 1710
SstI GAGCTC 1 cut(s) 1827
StuI AGGCCT 1 cut(s) 1320
StyI CCWWGG 4 cut(s) 267, 951, 1643, 2037
TaaI ACNGT 4 cut(s) 180, 467, 1174, 2117
TaiI ACGT 2 cut(s) 1152, 1442
TasI AATT 2 cut(s) 1575, 1696
TauI GCSGC 2 cut(s) 460, 1222
TfiI GAWTC 4 cut(s) 85, 542, 812, 2095
Tru1I TTAA 1 cut(s) 1266
Tru9I TTAA 1 cut(s) 1266
TscAI CASTG 1 cut(s) 1944
TseFI GTSAC 6 cut(s) 601, 755, 862, 1145, 1291, 2207
TseI GCWGC 8 cut(s) 407, 529, 889, 1486, 1972, 1975, 2030, 2033
Tsp45I GTSAC 6 cut(s) 601, 755, 862, 1145, 1291, 2207
TspDTI ATGAA 3 cut(s) 1179, 1586, 1866
TspGWI ACGGA 2 cut(s) 1015, 1795
TspMI CCCGGG 1 cut(s) 65
TspRI CASTG 1 cut(s) 1944
VpaK11BI GGWCC 4 cut(s) 1120, 1398, 1476, 2113
XceI RCATGY 1 cut(s) 886
XcmI CCANNNNNNNNNTGG 3 cut(s) 1064, 1177, 1597
XhoI CTCGAG 5 cut(s) 137, 1005, 1092, 1496, 1826
XmaI CCCGGG 1 cut(s) 65
XmaJI CCTAGG 1 cut(s) 1643
XspI CTAG 7 cut(s) 41, 74, 78, 150, 747, 1644, 1710
Zsp2I ATGCAT 1 cut(s) 383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.