Rmu_sc0001967.1_g000002

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001967.1
OG0000075
Physical Location & Seq
Forward (+)
4165 .. 6051
1887 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001967.1_g000002.1.cds

Sequence Viewer

Length: 1572 bp
atgtatttgaggtttcccaatgccgttctagagtatctcaatcagcgggccaaagaggaggctggagcagaggggcatgaggttcgcggtgcttgggagcctactcgagatgcccaggagcagcccatgcaggcatgcgaggtgggcgagctgccccaagtgtgctttggcgagcgtcagtcccccgagactcgggaagtgatgaggcagtccccccaggtctcggtagggggggaggatcttggtgacttggctcgggcctcgaagcccacggtggaggtggagatctccgtcgaggtacctgaggtgcaacccgagtctggagagggtataactagggttgctcaggttatcgagacggggacccaagatggcgagggggatgaagtccgagagtcagagacctgtgctcgtacagatgggatctggtcgaggaagaggacggcctcgcagcttcgtctcgggagtcccccggttggtcttggtatcgacactcatggtggtttccggggtctcgagcgtagattgggagatatcggaattactgatggtgccatccttcatatgattaccgacctgcggaactatcatggcgaccgcagccgcgtgagtagggaagatccacgcttagggtaccgggaggctcaggaaaggctgatgagggctgtgaacatgaattatcatgcctcgggcgagttggtggctcattttgatcgggagataggccagctacatggggagctgaatgcatatagggagagggcccgtgggctacaaagtgcgttggaccaaggtcaagtggaatgcgaggatatgaggcgagcgatcgacgatgggatcacgagaaggatggcgttggagagagcactcgcggtggaagaggcccgctgccaagaggttgaggatgctatcgctccattgagggagtcaaacctggatcttaccgggaagctacaatgggtggaagatgggctgaggttggtggagcaagttagggcccgggtggccgatgctaaagagcatttgcaagacttagaaaggcaggttctagaacgcgatgttgagttggagcttcgggctgctgcctttgagagtttggctccttatcccgatcgtgtggtggatttggaggggcaggttggaaatctgcaaagggaggttgatcgtctacgggatgttgagcttgaaacagaatgcatttgtctacgtgctgctgccgagacacatcgggacaagctccacaaggccagtagggatagggcagacaaggcggtggacctctatctccggtcaagccatttccaagagaagatgaataaggccttctcggatggggtcttgcactcgattaaagatggtatcgttactgggtggatagacaaagagaagatggccgtgtccgagcgtacatcgggacaagtgggcggtcgcgaggcggaggttactattggcggacaggaggcccgtggccaagagggtgaggtgcaagacgagaatgttggggagcgagacgtggtggaggagcgagatcgaagagaaaagcagccacgtagtgccgagggcgagacctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

523

Amino Acids

58.65

Weight (kDa)

4.92

Isoelectric Point (pI)

44.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 585, 1033, 1126
Acc65I GGTACC 2 cut(s) 298, 633
AccB1I GGYRCC 3 cut(s) 298, 551, 633
AccI GTMKAC 2 cut(s) 1168, 1204
AccII CGCG 5 cut(s) 87, 606, 872, 1056, 1431
AclWI GGATC 5 cut(s) 246, 431, 614, 845, 945
AcoI YGGCCR 3 cut(s) 1005, 1392, 1468
AdeI CACNNNGTG 1 cut(s) 1553
AfaI GTAC 4 cut(s) 300, 415, 635, 1408
AfiI CCNNNNNNNGG 6 cut(s) 192, 223, 320, 476, 579, 629
AgsI TTSAA 1 cut(s) 1187
AjiI CACGTC 1 cut(s) 1513
AjnI CCWGG 3 cut(s) 114, 216, 933
AluBI AGCT 8 cut(s) 151, 454, 730, 742, 952, 1072, 1183, 1237
AluI AGCT 8 cut(s) 151, 454, 730, 742, 952, 1072, 1183, 1237
Alw21I GWGCWC 2 cut(s) 412, 868
Alw26I GTCTC 9 cut(s) 182, 226, 350, 395, 464, 518, 1214, 1503, 1559
AlwI GGATC 5 cut(s) 246, 431, 614, 845, 945
Ama87I CYCGRG 9 cut(s) 105, 185, 192, 255, 314, 461, 515, 688, 999
ApaI GGGCCC 2 cut(s) 766, 1000
Asp718I GGTACC 2 cut(s) 298, 633
AsuC2I CCSGG 6 cut(s) 473, 509, 638, 946, 1000, 1001
AsuHPI GGTGA 2 cut(s) 257, 1490
AvaI CYCGRG 9 cut(s) 105, 185, 192, 255, 314, 461, 515, 688, 999
AvaII GGWCC 3 cut(s) 363, 787, 1276
AxyI CCTNAGG 1 cut(s) 303
BaeGI GKGCMC 2 cut(s) 766, 1000
BalI TGGCCA 1 cut(s) 1470
BanI GGYRCC 3 cut(s) 298, 551, 633
BanII GRGCYC 2 cut(s) 766, 1000
BauI CACGAG 1 cut(s) 841
Bbv12I GWGCWC 2 cut(s) 412, 868
BbvCI CCTCAGC 1 cut(s) 974
BceAI ACGGC 3 cut(s) 8, 459, 1379
BcgI CGANNNNNNTGC 2 cut(s) 65, 99
BciT130I CCWGG 3 cut(s) 116, 218, 935
BcnI CCSGG 6 cut(s) 473, 509, 638, 946, 1000, 1001
BcoDI GTCTC 9 cut(s) 182, 226, 350, 395, 464, 518, 1214, 1503, 1559
BfaI CTAG 4 cut(s) 29, 336, 1049, 1570
BfuAI ACCTGC 3 cut(s) 585, 1033, 1126
BglI GCCNNNNNGGC 1 cut(s) 1004
BglII AGATCT 1 cut(s) 285
Bme1390I CCNGG 9 cut(s) 116, 218, 473, 509, 638, 935, 946, 1000, 1001
Bme18I GGWCC 3 cut(s) 363, 787, 1276
BmeT110I CYCGRG 9 cut(s) 105, 185, 192, 255, 314, 461, 515, 688, 999
BmgBI CACGTC 1 cut(s) 1513
BmiI GGNNCC 9 cut(s) 99, 300, 364, 365, 553, 635, 764, 998, 1101
BmrFI CCNGG 9 cut(s) 116, 218, 473, 509, 638, 935, 946, 1000, 1001
BmrI ACTGGG 1 cut(s) 1377
BmsI GCATC 3 cut(s) 100, 895, 1000
BmuI ACTGGG 1 cut(s) 1377
BoxI GACNNNNGTC 1 cut(s) 792
BplI GAGNNNNNCTC 2 cut(s) 1084, 1116
BpmI CTGGAG 2 cut(s) 84, 342
Bpu10I CCTNAGC 4 cut(s) 345, 628, 645, 974
BpuMI CCSGG 6 cut(s) 473, 509, 638, 946, 1000, 1001
BsaAI YACGTR 2 cut(s) 1208, 1550
BsaI GGTCTC 4 cut(s) 226, 395, 518, 1559
BsaWI WCCGGW 1 cut(s) 1287
Bsc4I CCNNNNNNNGG 6 cut(s) 192, 223, 320, 476, 579, 629
Bse1I ACTGG 2 cut(s) 1248, 1372
Bse21I CCTNAGG 1 cut(s) 303
BseBI CCWGG 3 cut(s) 116, 218, 935
BseGI GGATG 6 cut(s) 388, 555, 855, 910, 1180, 1336
BseLI CCNNNNNNNGG 6 cut(s) 192, 223, 320, 476, 579, 629
BseMII CTCAG 4 cut(s) 294, 359, 659, 965
BseNI ACTGG 2 cut(s) 1248, 1372
BseRI GAGGAG 2 cut(s) 71, 1535
BseSI GKGCMC 2 cut(s) 766, 1000
Bsh1236I CGCG 5 cut(s) 87, 606, 872, 1056, 1431
Bsh1285I CGRYCG 4 cut(s) 598, 828, 1114, 1429
BshNI GGYRCC 3 cut(s) 298, 551, 633
BsiEI CGRYCG 4 cut(s) 598, 828, 1114, 1429
BsiHKAI GWGCWC 2 cut(s) 412, 868
BsiHKCI CYCGRG 9 cut(s) 105, 185, 192, 255, 314, 461, 515, 688, 999
BsiSI CCGG 6 cut(s) 473, 508, 637, 945, 1000, 1288
BslFI GGGAC 6 cut(s) 166, 196, 376, 453, 1244, 1428
BslI CCNNNNNNNGG 6 cut(s) 192, 223, 320, 476, 579, 629
BsmAI GTCTC 9 cut(s) 182, 226, 350, 395, 464, 518, 1214, 1503, 1559
BsmBI CGTCTC 3 cut(s) 350, 464, 1503
BsmFI GGGAC 6 cut(s) 166, 196, 376, 453, 1244, 1428
BsmI GAATGC 3 cut(s) 751, 809, 1199
Bso31I GGTCTC 4 cut(s) 226, 395, 518, 1559
BsoBI CYCGRG 9 cut(s) 105, 185, 192, 255, 314, 461, 515, 688, 999
Bsp120I GGGCCC 2 cut(s) 762, 996
Bsp1286I GDGCHC 4 cut(s) 412, 766, 868, 1000
Bsp68I TCGCGA 1 cut(s) 1431
BspCNI CTCAG 4 cut(s) 295, 358, 658, 966
BspFNI CGCG 5 cut(s) 87, 606, 872, 1056, 1431
BspLI GGNNCC 9 cut(s) 99, 300, 364, 365, 553, 635, 764, 998, 1101
BspMI ACCTGC 3 cut(s) 585, 1033, 1126
BspPI GGATC 5 cut(s) 246, 431, 614, 845, 945
BspT107I GGYRCC 3 cut(s) 298, 551, 633
BspTNI GGTCTC 4 cut(s) 226, 395, 518, 1559
BsrI ACTGG 2 cut(s) 1248, 1372
BssSI CACGAG 1 cut(s) 841
BssT1I CCWWGG 1 cut(s) 790
Bst2BI CACGAG 1 cut(s) 841
Bst2UI CCWGG 3 cut(s) 116, 218, 935
Bst4CI ACNGT 1 cut(s) 274
Bst6I CTCTTC 3 cut(s) 431, 873, 1528
BstAPI GCANNNNNTGC 1 cut(s) 127
BstBAI YACGTR 2 cut(s) 1208, 1550
BstC8I GCNNGC 8 cut(s) 48, 132, 136, 149, 173, 728, 822, 886
BstDEI CTNAG 6 cut(s) 303, 345, 628, 645, 974, 1033
BstDSI CCRYGG 3 cut(s) 270, 766, 1465
BstF5I GGATG 6 cut(s) 388, 555, 855, 910, 1180, 1336
BstFNI CGCG 5 cut(s) 87, 606, 872, 1056, 1431
BstMAI GTCTC 9 cut(s) 182, 226, 350, 395, 464, 518, 1214, 1503, 1559
BstMCI CGRYCG 4 cut(s) 598, 828, 1114, 1429
BstMWI GCNNNNNNNGC 5 cut(s) 127, 144, 600, 1004, 1268
BstNI CCWGG 3 cut(s) 116, 218, 935
BstNSI RCATGY 1 cut(s) 138
BstPAI GACNNNNGTC 1 cut(s) 792
BstSCI CCNGG 9 cut(s) 114, 216, 471, 507, 636, 933, 944, 998, 999
BstSLI GKGCMC 2 cut(s) 766, 1000
BstUI CGCG 5 cut(s) 87, 606, 872, 1056, 1431
BstX2I RGATCY 5 cut(s) 238, 285, 423, 619, 937
BstXI CCANNNNNNTGG 1 cut(s) 734
BstYI RGATCY 5 cut(s) 238, 285, 423, 619, 937
Bsu36I CCTNAGG 1 cut(s) 303
BtgI CCRYGG 3 cut(s) 270, 766, 1465
BtgZI GCGATG 1 cut(s) 1071
BtrI CACGTC 1 cut(s) 1513
BtsCI GGATG 6 cut(s) 388, 555, 855, 910, 1180, 1336
BtuMI TCGCGA 1 cut(s) 1431
BveI ACCTGC 3 cut(s) 585, 1033, 1126
Cac8I GCNNGC 8 cut(s) 48, 132, 136, 149, 173, 728, 822, 886
Cfr9I CCCGGG 1 cut(s) 999
CseI GACGC 1 cut(s) 164
Csp6I GTAC 4 cut(s) 299, 414, 634, 1407
CviAII CATG 8 cut(s) 77, 127, 135, 497, 590, 673, 683, 734
CviQI GTAC 4 cut(s) 299, 414, 634, 1407
DdeI CTNAG 6 cut(s) 303, 345, 628, 645, 974, 1033
DraIII CACNNNGTG 1 cut(s) 1553
EaeI YGGCCR 3 cut(s) 1005, 1392, 1468
Eam1104I CTCTTC 3 cut(s) 431, 873, 1528
EarI CTCTTC 3 cut(s) 431, 873, 1528
EciI GGCGGA 2 cut(s) 1451, 1467
Eco130I CCWWGG 1 cut(s) 790
Eco147I AGGCCT 1 cut(s) 1322
Eco24I GRGCYC 2 cut(s) 766, 1000
Eco31I GGTCTC 4 cut(s) 226, 395, 518, 1559
Eco32I GATATC 1 cut(s) 535
Eco47I GGWCC 3 cut(s) 363, 787, 1276
Eco81I CCTNAGG 1 cut(s) 303
Eco88I CYCGRG 9 cut(s) 105, 185, 192, 255, 314, 461, 515, 688, 999
EcoO109I RGGNCCY 3 cut(s) 363, 762, 996
EcoRII CCWGG 3 cut(s) 114, 216, 933
EcoRV GATATC 1 cut(s) 535
EcoT14I CCWWGG 1 cut(s) 790
EcoT22I ATGCAT 2 cut(s) 751, 1199
EcoT38I GRGCYC 2 cut(s) 766, 1000
ErhI CCWWGG 1 cut(s) 790
Esp3I CGTCTC 3 cut(s) 350, 464, 1503
FaeI CATG 8 cut(s) 80, 130, 138, 500, 593, 676, 686, 737
FaqI GGGAC 6 cut(s) 166, 196, 376, 453, 1244, 1428
FatI CATG 8 cut(s) 76, 126, 134, 496, 589, 672, 682, 733
FauI CCCGC 2 cut(s) 39, 893
FauNDI CATATG 1 cut(s) 564
FblI GTMKAC 2 cut(s) 1168, 1204
FokI GGATG 6 cut(s) 395, 542, 862, 917, 1187, 1343
FriOI GRGCYC 2 cut(s) 766, 1000
FspBI CTAG 4 cut(s) 29, 336, 1049, 1570
GsuI CTGGAG 2 cut(s) 84, 342
HapII CCGG 6 cut(s) 473, 508, 637, 945, 1000, 1288
HgaI GACGC 1 cut(s) 164
Hin1II CATG 8 cut(s) 80, 130, 138, 500, 593, 676, 686, 737
HinfI GANTC 5 cut(s) 190, 317, 395, 466, 926
HpaII CCGG 6 cut(s) 473, 508, 637, 945, 1000, 1288
HphI GGTGA 2 cut(s) 257, 1490
Hpy166II GTNNAC 4 cut(s) 670, 1169, 1205, 1276
Hpy188I TCNGA 5 cut(s) 392, 400, 539, 1330, 1402
Hpy8I GTNNAC 4 cut(s) 670, 1169, 1205, 1276
Hpy99I CGWCG 2 cut(s) 296, 833
HpyAV CCTTC 3 cut(s) 569, 840, 1333
HpyCH4III ACNGT 1 cut(s) 274
HpyCH4IV ACGT 3 cut(s) 1207, 1512, 1549
HpyCH4V TGCA 8 cut(s) 130, 310, 749, 1027, 1150, 1197, 1342, 1486
HpyF10VI GCNNNNNNNGC 5 cut(s) 127, 144, 600, 1004, 1268
HpyF3I CTNAG 6 cut(s) 303, 345, 628, 645, 974, 1033
HpySE526I ACGT 3 cut(s) 1207, 1512, 1549
Hsp92II CATG 8 cut(s) 80, 130, 138, 500, 593, 676, 686, 737
KflI GGGWCCC 1 cut(s) 363
KpnI GGTACC 2 cut(s) 302, 637
LweI GCATC 3 cut(s) 100, 895, 1000
MaeI CTAG 4 cut(s) 29, 336, 1049, 1570
MaeII ACGT 3 cut(s) 1207, 1512, 1549
MaeIII GTNAC 3 cut(s) 245, 1363, 1441
MboII GAAGA 7 cut(s) 448, 629, 890, 977, 1321, 1399, 1545
MflI RGATCY 5 cut(s) 238, 285, 423, 619, 937
MhlI GDGCHC 4 cut(s) 412, 766, 868, 1000
MlsI TGGCCA 1 cut(s) 1470
MluCI AATT 2 cut(s) 540, 676
MluNI TGGCCA 1 cut(s) 1470
MlyI GAGTC 5 cut(s) 184, 326, 404, 475, 935
MmeI TCCRAC 4 cut(s) 765, 837, 1047, 1120
Mox20I TGGCCA 1 cut(s) 1470
Mph1103I ATGCAT 2 cut(s) 751, 1199
MscI TGGCCA 1 cut(s) 1470
MseI TTAA 1 cut(s) 1350
Msp20I TGGCCA 1 cut(s) 1470
MspA1I CMGCKG 2 cut(s) 46, 888
MspI CCGG 6 cut(s) 473, 508, 637, 945, 1000, 1288
MspR9I CCNGG 9 cut(s) 116, 218, 473, 509, 638, 935, 946, 1000, 1001
Mva1269I GAATGC 3 cut(s) 751, 809, 1199
MvaI CCWGG 3 cut(s) 116, 218, 935
MvnI CGCG 5 cut(s) 87, 606, 872, 1056, 1431
MwoI GCNNNNNNNGC 5 cut(s) 127, 144, 600, 1004, 1268
NciI CCSGG 6 cut(s) 473, 509, 638, 946, 1000, 1001
NdeI CATATG 1 cut(s) 564
NlaIII CATG 8 cut(s) 80, 130, 138, 500, 593, 676, 686, 737
NlaIV GGNNCC 9 cut(s) 99, 300, 364, 365, 553, 635, 764, 998, 1101
NmeAIII GCCGAG 1 cut(s) 1243
NmuCI GTSAC 1 cut(s) 245
NruI TCGCGA 1 cut(s) 1431
NsiI ATGCAT 2 cut(s) 751, 1199
NspI RCATGY 1 cut(s) 138
PaeI GCATGC 1 cut(s) 138
PaeR7I CTCGAG 2 cut(s) 105, 515
PceI AGGCCT 1 cut(s) 1322
PctI GAATGC 3 cut(s) 751, 809, 1199
Ple19I CGATCG 2 cut(s) 828, 1114
PleI GAGTC 5 cut(s) 184, 325, 403, 474, 934
PpsI GAGTC 5 cut(s) 184, 325, 403, 474, 934
Ppu21I YACGTR 2 cut(s) 1208, 1550
PpuMI RGGWCCY 1 cut(s) 363
PshAI GACNNNNGTC 1 cut(s) 792
Psp5II RGGWCCY 1 cut(s) 363
Psp6I CCWGG 3 cut(s) 114, 216, 933
PspGI CCWGG 3 cut(s) 114, 216, 933
PspN4I GGNNCC 9 cut(s) 99, 300, 364, 365, 553, 635, 764, 998, 1101
PspOMI GGGCCC 2 cut(s) 762, 996
PspPPI RGGWCCY 1 cut(s) 363
PsuI RGATCY 5 cut(s) 238, 285, 423, 619, 937
PvuI CGATCG 2 cut(s) 828, 1114
RruI TCGCGA 1 cut(s) 1431
RsaI GTAC 4 cut(s) 300, 415, 635, 1408
RsaNI GTAC 4 cut(s) 299, 414, 634, 1407
SaqAI TTAA 1 cut(s) 1350
SchI GAGTC 5 cut(s) 184, 326, 404, 475, 935
ScrFI CCNGG 9 cut(s) 116, 218, 473, 509, 638, 935, 946, 1000, 1001
SduI GDGCHC 4 cut(s) 412, 766, 868, 1000
SfaNI GCATC 3 cut(s) 100, 895, 1000
SfiI GGCCNNNNNGGCC 1 cut(s) 1004
Sfr274I CTCGAG 2 cut(s) 105, 515
SinI GGWCC 3 cut(s) 363, 787, 1276
SlaI CTCGAG 2 cut(s) 105, 515
SmaI CCCGGG 1 cut(s) 1001
SmlI CTYRAG 2 cut(s) 105, 515
SmoI CTYRAG 2 cut(s) 105, 515
SphI GCATGC 1 cut(s) 138
Sse9I AATT 2 cut(s) 540, 676
SseBI AGGCCT 1 cut(s) 1322
SspMI CTAG 4 cut(s) 29, 336, 1049, 1570
StuI AGGCCT 1 cut(s) 1322
StyD4I CCNGG 9 cut(s) 114, 216, 471, 507, 636, 933, 944, 998, 999
StyI CCWWGG 1 cut(s) 790
TaaI ACNGT 1 cut(s) 274
TaiI ACGT 3 cut(s) 1210, 1515, 1552
TasI AATT 2 cut(s) 540, 676
TauI GCSGC 1 cut(s) 606
Tru1I TTAA 1 cut(s) 1350
Tru9I TTAA 1 cut(s) 1350
TseFI GTSAC 1 cut(s) 245
Tsp45I GTSAC 1 cut(s) 245
TspDTI ATGAA 4 cut(s) 399, 551, 689, 1328
TspGWI ACGGA 1 cut(s) 280
TspMI CCCGGG 1 cut(s) 999
VpaK11BI GGWCC 3 cut(s) 363, 787, 1276
XbaI TCTAGA 2 cut(s) 28, 1048
XceI RCATGY 1 cut(s) 138
XcmI CCANNNNNNNNNTGG 2 cut(s) 164, 277
XhoI CTCGAG 2 cut(s) 105, 515
XmaI CCCGGG 1 cut(s) 999
XmiI GTMKAC 2 cut(s) 1168, 1204
XspI CTAG 4 cut(s) 29, 336, 1049, 1570
Zsp2I ATGCAT 2 cut(s) 751, 1199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.