Rmu_sc0001294.1_g000025

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001294.1
OG0000075
Physical Location & Seq
Reverse (-)
98519 .. 101536
3018 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001294.1_g000025.1.cds

Sequence Viewer

Length: 1200 bp
atgaattaccatgcctcgggagagttgatggctcattttgatcgggatatagcctggctgcagggggagctggctgctgagagggagcgggcccgtgggctacagagtacattagaccaaggtcaggtggaacgcgatgatatgaggcgagcgattgatgatgggatcgcgagaagaatagagttggagcaagcactcgcggtagacgaggctcgccgccaagaggttgaggatgctatcgctccgttgagggagtccaacctggatcttaccgggaagctgcaacgggcggaggatggtctgagattggttcgagaacgtgatgtcgagtttgagctttgggctgctgccttgaagagtttggctccttatcccgaccgtgtggtagatttggtggggcaggttgggaatctgcaaagggtggttgaccgtctacgagatgttgagcttgaagcaggcgagaaggaggtagagatagagcggctcaagaaggagttagccgagcaacagacctggtcgagtaactttaacgaagaatgcattcgcctgcccactgctgccgagacacatcgggacaagctccgtaagcccagtcgggatggggcggacaaggcggtggatctctatctccgttcaaaccacttccaagagaagatgaacaaagccttctcggatggggtcttgcactcgattaaagatggtatcgctgtggggtggattaaccaagagaagatggtgcatgacatgcaggccatgaaagcagcgagatcacaggccagtgcagcgagtggtggtcggagttctgggatagtgatccgggagcaggtcatgcaggagagtgcatcggggcaagcgggcgatcgcgaggcggaggttagtactggcgatggggtacgggtgtgcgctatatttcaaggcagcataatcagttccagagcggagggagaatggcgaggcgttaatattgggcaacttcgtttggcgtggtatagcattagttttggccgttgcagcctcctatcccgtatcgttgcagtgtgcacggggttcgtgagtggcgatgtgtcgtgtagcaataagttgggattgctgtacagtgtgcccttgcctgctatgtgttatggtggccatcgtaaggcctatggtgataataacgggagagatgtgacccatcataggtcgaaaggcgataagcgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

399

Amino Acids

44.4

Weight (kDa)

5.95

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 391, 814
AccBSI CCGCTC 3 cut(s) 88, 481, 938
AccI GTMKAC 2 cut(s) 204, 433
AccII CGCG 4 cut(s) 135, 170, 200, 864
AclWI GGATC 4 cut(s) 173, 273, 627, 808
AcoI YGGCCR 2 cut(s) 1003, 1126
AfaI GTAC 4 cut(s) 109, 880, 894, 1094
AfiI CCNNNNNNNGG 6 cut(s) 16, 124, 223, 823, 1135, 1176
AgsI TTSAA 4 cut(s) 355, 452, 636, 914
AjnI CCWGG 3 cut(s) 53, 261, 512
AluBI AGCT 5 cut(s) 70, 280, 337, 448, 580
AluI AGCT 5 cut(s) 70, 280, 337, 448, 580
Alw21I GWGCWC 1 cut(s) 1043
Alw26I GTCTC 1 cut(s) 557
Alw44I GTGCAC 1 cut(s) 1039
AlwI GGATC 4 cut(s) 173, 273, 627, 808
Ama87I CYCGRG 1 cut(s) 16
AoxI GGCC 6 cut(s) 90, 750, 774, 1003, 1126, 1137
ApaI GGGCCC 1 cut(s) 94
ApaLI GTGCAC 1 cut(s) 1039
AsiSI GCGATCGC 1 cut(s) 862
Asp700I GAANNNNTTC 1 cut(s) 540
AspLEI GCGC 1 cut(s) 905
AspS9I GGNCC 2 cut(s) 90, 91
AsuC2I CCSGG 2 cut(s) 274, 818
AsuHPI GGTGA 1 cut(s) 1157
AvaI CYCGRG 1 cut(s) 16
BaeGI GKGCMC 3 cut(s) 94, 1043, 1104
BaeI ACNNNNGTAYC 2 cut(s) 884, 917
BalI TGGCCA 1 cut(s) 1128
BanII GRGCYC 1 cut(s) 94
Bbv12I GWGCWC 1 cut(s) 1043
BceAI ACGGC 1 cut(s) 990
BcgI CGANNNNNNTGC 2 cut(s) 1030, 1064
BciT130I CCWGG 3 cut(s) 55, 263, 514
BcnI CCSGG 2 cut(s) 274, 818
BcoDI GTCTC 1 cut(s) 557
BfmI CTRYAG 2 cut(s) 59, 101
BfuAI ACCTGC 2 cut(s) 391, 814
BmcAI AGTACT 1 cut(s) 880
Bme1390I CCNGG 5 cut(s) 55, 263, 274, 514, 818
BmeT110I CYCGRG 1 cut(s) 16
BmgT120I GGNCC 2 cut(s) 90, 91
BmiI GGNNCC 2 cut(s) 92, 366
BmrFI CCNGG 5 cut(s) 55, 263, 274, 514, 818
BmrI ACTGGG 1 cut(s) 585
BmsI GCATC 2 cut(s) 223, 851
BmuI ACTGGG 1 cut(s) 585
BoxI GACNNNNGTC 1 cut(s) 120
BplI GAGNNNNNCTC 2 cut(s) 349, 381
BpuEI CTTGAG 1 cut(s) 470
BpuMI CCSGG 2 cut(s) 274, 818
BsaBI GATNNNNATC 2 cut(s) 624, 812
BsaJI CCNNGG 3 cut(s) 15, 94, 118
Bsc4I CCNNNNNNNGG 6 cut(s) 16, 124, 223, 823, 1135, 1176
Bse1I ACTGG 3 cut(s) 591, 777, 886
Bse8I GATNNNNATC 2 cut(s) 624, 812
BseBI CCWGG 3 cut(s) 55, 263, 514
BseDI CCNNGG 3 cut(s) 15, 94, 118
BseGI GGATG 4 cut(s) 238, 301, 604, 679
BseJI GATNNNNATC 2 cut(s) 624, 812
BseLI CCNNNNNNNGG 6 cut(s) 16, 124, 223, 823, 1135, 1176
BseMII CTCAG 2 cut(s) 69, 293
BseNI ACTGG 3 cut(s) 591, 777, 886
BseSI GKGCMC 3 cut(s) 94, 1043, 1104
BsgI GTGCAG 1 cut(s) 801
Bsh1236I CGCG 4 cut(s) 135, 170, 200, 864
Bsh1285I CGRYCG 2 cut(s) 379, 862
BshFI GGCC 6 cut(s) 92, 752, 776, 1005, 1128, 1139
BsiEI CGRYCG 2 cut(s) 379, 862
BsiHKAI GWGCWC 1 cut(s) 1043
BsiHKCI CYCGRG 1 cut(s) 16
BsiSI CCGG 2 cut(s) 273, 817
BslFI GGGAC 1 cut(s) 587
BslI CCNNNNNNNGG 6 cut(s) 16, 124, 223, 823, 1135, 1176
BsmAI GTCTC 1 cut(s) 557
BsmFI GGGAC 1 cut(s) 587
BsmI GAATGC 2 cut(s) 540, 542
BsnI GGCC 6 cut(s) 92, 752, 776, 1005, 1128, 1139
BsoBI CYCGRG 1 cut(s) 16
Bsp120I GGGCCC 1 cut(s) 90
Bsp1286I GDGCHC 3 cut(s) 94, 1043, 1104
Bsp1407I TGTACA 1 cut(s) 1092
Bsp143I GATC 7 cut(s) 40, 165, 265, 619, 767, 813, 859
Bsp68I TCGCGA 2 cut(s) 170, 864
BspANI GGCC 6 cut(s) 92, 752, 776, 1005, 1128, 1139
BspCNI CTCAG 2 cut(s) 70, 294
BspFNI CGCG 4 cut(s) 135, 170, 200, 864
BspLI GGNNCC 2 cut(s) 92, 366
BspMAI CTGCAG 1 cut(s) 63
BspMI ACCTGC 2 cut(s) 391, 814
BspPI GGATC 4 cut(s) 173, 273, 627, 808
BsrBI CCGCTC 3 cut(s) 88, 481, 938
BsrGI TGTACA 1 cut(s) 1092
BsrI ACTGG 3 cut(s) 591, 777, 886
BssECI CCNNGG 3 cut(s) 15, 94, 118
BssMI GATC 7 cut(s) 40, 165, 265, 619, 767, 813, 859
BssT1I CCWWGG 1 cut(s) 118
Bst2UI CCWGG 3 cut(s) 55, 263, 514
Bst4CI ACNGT 3 cut(s) 380, 431, 1097
Bst6I CTCTTC 1 cut(s) 350
BstAPI GCANNNNNTGC 2 cut(s) 745, 829
BstAUI TGTACA 1 cut(s) 1092
BstDEI CTNAG 2 cut(s) 78, 302
BstDSI CCRYGG 1 cut(s) 94
BstF5I GGATG 4 cut(s) 238, 301, 604, 679
BstFNI CGCG 4 cut(s) 135, 170, 200, 864
BstHHI GCGC 1 cut(s) 905
BstKTI GATC 7 cut(s) 43, 168, 268, 622, 770, 816, 862
BstMAI GTCTC 1 cut(s) 557
BstMBI GATC 7 cut(s) 40, 165, 265, 619, 767, 813, 859
BstMCI CGRYCG 2 cut(s) 379, 862
BstMWI GCNNNNNNNGC 8 cut(s) 67, 586, 611, 745, 758, 782, 829, 1011
BstNI CCWGG 3 cut(s) 55, 263, 514
BstNSI RCATGY 1 cut(s) 748
BstPAI GACNNNNGTC 1 cut(s) 120
BstSCI CCNGG 5 cut(s) 53, 261, 272, 512, 816
BstSFI CTRYAG 2 cut(s) 59, 101
BstSLI GKGCMC 3 cut(s) 94, 1043, 1104
BstUI CGCG 4 cut(s) 135, 170, 200, 864
BstX2I RGATCY 2 cut(s) 265, 619
BstYI RGATCY 2 cut(s) 265, 619
BsuRI GGCC 6 cut(s) 92, 752, 776, 1005, 1128, 1139
BtgI CCRYGG 1 cut(s) 94
BtgZI GCGATG 3 cut(s) 150, 900, 1074
BtsCI GGATG 4 cut(s) 238, 301, 604, 679
BtsI GCAGTG 2 cut(s) 552, 1041
BtsIMutI CAGTG 4 cut(s) 552, 784, 1041, 1102
BtuMI TCGCGA 2 cut(s) 170, 864
BveI ACCTGC 2 cut(s) 391, 814
CfoI GCGC 1 cut(s) 905
Cfr13I GGNCC 2 cut(s) 90, 91
CsiI ACCWGGT 1 cut(s) 512
Csp6I GTAC 4 cut(s) 108, 879, 893, 1093
CviAII CATG 5 cut(s) 11, 740, 745, 754, 829
CviQI GTAC 4 cut(s) 108, 879, 893, 1093
DdeI CTNAG 2 cut(s) 78, 302
DpnI GATC 7 cut(s) 42, 167, 267, 621, 769, 815, 861
DpnII GATC 7 cut(s) 40, 165, 265, 619, 767, 813, 859
EaeI YGGCCR 2 cut(s) 1003, 1126
Eam1104I CTCTTC 1 cut(s) 350
EarI CTCTTC 1 cut(s) 350
EciI GGCGGA 3 cut(s) 305, 620, 884
Eco130I CCWWGG 1 cut(s) 118
Eco147I AGGCCT 1 cut(s) 1139
Eco24I GRGCYC 1 cut(s) 94
Eco88I CYCGRG 1 cut(s) 16
EcoRII CCWGG 3 cut(s) 53, 261, 512
EcoT14I CCWWGG 1 cut(s) 118
EcoT22I ATGCAT 1 cut(s) 542
EcoT38I GRGCYC 1 cut(s) 94
ErhI CCWWGG 1 cut(s) 118
FaeI CATG 5 cut(s) 14, 743, 748, 757, 832
FaqI GGGAC 1 cut(s) 587
FatI CATG 5 cut(s) 10, 739, 744, 753, 828
FauI CCCGC 2 cut(s) 81, 847
FblI GTMKAC 2 cut(s) 204, 433
FokI GGATG 4 cut(s) 245, 308, 611, 686
FriOI GRGCYC 1 cut(s) 94
GlaI GCGC 1 cut(s) 904
HaeIII GGCC 6 cut(s) 92, 752, 776, 1005, 1128, 1139
HapII CCGG 2 cut(s) 273, 817
HhaI GCGC 1 cut(s) 905
Hin1II CATG 5 cut(s) 14, 743, 748, 757, 832
Hin6I GCGC 1 cut(s) 903
HinP1I GCGC 1 cut(s) 903
HincII GTYRAC 1 cut(s) 427
HindII GTYRAC 1 cut(s) 427
HinfI GANTC 2 cut(s) 254, 409
HpaII CCGG 2 cut(s) 273, 817
HphI GGTGA 1 cut(s) 1157
Hpy166II GTNNAC 4 cut(s) 205, 427, 434, 1041
Hpy188I TCNGA 3 cut(s) 303, 673, 798
Hpy8I GTNNAC 4 cut(s) 205, 427, 434, 1041
HpyAV CCTTC 3 cut(s) 457, 484, 676
HpyCH4III ACNGT 3 cut(s) 380, 431, 1097
HpyCH4IV ACGT 1 cut(s) 319
HpyF10VI GCNNNNNNNGC 8 cut(s) 67, 586, 611, 745, 758, 782, 829, 1011
HpyF3I CTNAG 2 cut(s) 78, 302
HpySE526I ACGT 1 cut(s) 319
Hsp92II CATG 5 cut(s) 14, 743, 748, 757, 832
HspAI GCGC 1 cut(s) 903
Kzo9I GATC 7 cut(s) 40, 165, 265, 619, 767, 813, 859
LmnI GCTCC 7 cut(s) 67, 85, 187, 247, 370, 585, 820
LweI GCATC 2 cut(s) 223, 851
MabI ACCWGGT 1 cut(s) 512
MaeII ACGT 1 cut(s) 319
MaeIII GTNAC 2 cut(s) 521, 1165
MalI GATC 7 cut(s) 42, 167, 267, 621, 769, 815, 861
MbiI CCGCTC 3 cut(s) 88, 481, 938
MboI GATC 7 cut(s) 40, 165, 265, 619, 767, 813, 859
MboII GAAGA 5 cut(s) 186, 367, 545, 664, 742
MflI RGATCY 2 cut(s) 265, 619
MhlI GDGCHC 3 cut(s) 94, 1043, 1104
MlsI TGGCCA 1 cut(s) 1128
MluCI AATT 1 cut(s) 4
MluNI TGGCCA 1 cut(s) 1128
MlyI GAGTC 1 cut(s) 263
MmeI TCCRAC 3 cut(s) 165, 282, 776
Mox20I TGGCCA 1 cut(s) 1128
Mph1103I ATGCAT 1 cut(s) 542
MroXI GAANNNNTTC 1 cut(s) 540
MscI TGGCCA 1 cut(s) 1128
MseI TTAA 5 cut(s) 528, 693, 720, 960, 1198
Msp20I TGGCCA 1 cut(s) 1128
MspI CCGG 2 cut(s) 273, 817
MspR9I CCNGG 5 cut(s) 55, 263, 274, 514, 818
Mva1269I GAATGC 2 cut(s) 540, 542
MvaI CCWGG 3 cut(s) 55, 263, 514
MvnI CGCG 4 cut(s) 135, 170, 200, 864
MwoI GCNNNNNNNGC 8 cut(s) 67, 586, 611, 745, 758, 782, 829, 1011
NciI CCSGG 2 cut(s) 274, 818
NdeII GATC 7 cut(s) 40, 165, 265, 619, 767, 813, 859
NlaIII CATG 5 cut(s) 14, 743, 748, 757, 832
NlaIV GGNNCC 2 cut(s) 92, 366
NmeAIII GCCGAG 2 cut(s) 526, 586
NmuCI GTSAC 1 cut(s) 1165
NruI TCGCGA 2 cut(s) 170, 864
NsiI ATGCAT 1 cut(s) 542
NspI RCATGY 1 cut(s) 748
PceI AGGCCT 1 cut(s) 1139
PcsI WCGNNNNNNNCGW 2 cut(s) 204, 1056
PctI GAATGC 2 cut(s) 540, 542
PdmI GAANNNNTTC 1 cut(s) 540
PfeI GAWTC 1 cut(s) 409
PflFI GACNNNGTC 1 cut(s) 514
PfoI TCCNGGA 1 cut(s) 816
Ple19I CGATCG 1 cut(s) 862
PleI GAGTC 1 cut(s) 262
PpsI GAGTC 1 cut(s) 262
PshAI GACNNNNGTC 1 cut(s) 120
Psp6I CCWGG 3 cut(s) 53, 261, 512
PspGI CCWGG 3 cut(s) 53, 261, 512
PspN4I GGNNCC 2 cut(s) 92, 366
PspOMI GGGCCC 1 cut(s) 90
PspPI GGNCC 2 cut(s) 90, 91
PstI CTGCAG 1 cut(s) 63
PsuI RGATCY 2 cut(s) 265, 619
PsyI GACNNNGTC 1 cut(s) 514
PvuI CGATCG 1 cut(s) 862
RgaI GCGATCGC 1 cut(s) 862
RruI TCGCGA 2 cut(s) 170, 864
RsaI GTAC 4 cut(s) 109, 880, 894, 1094
RsaNI GTAC 4 cut(s) 108, 879, 893, 1093
SaqAI TTAA 5 cut(s) 528, 693, 720, 960, 1198
Sau3AI GATC 7 cut(s) 40, 165, 265, 619, 767, 813, 859
Sau96I GGNCC 2 cut(s) 90, 91
ScaI AGTACT 1 cut(s) 880
SchI GAGTC 1 cut(s) 263
ScrFI CCNGG 5 cut(s) 55, 263, 274, 514, 818
SduI GDGCHC 3 cut(s) 94, 1043, 1104
SexAI ACCWGGT 1 cut(s) 512
SfaAI GCGATCGC 1 cut(s) 862
SfaNI GCATC 2 cut(s) 223, 851
SfcI CTRYAG 2 cut(s) 59, 101
SgfI GCGATCGC 1 cut(s) 862
SmlI CTYRAG 1 cut(s) 485
SmoI CTYRAG 1 cut(s) 485
Sse9I AATT 1 cut(s) 4
SseBI AGGCCT 1 cut(s) 1139
SspI AATATT 1 cut(s) 964
StuI AGGCCT 1 cut(s) 1139
StyD4I CCNGG 5 cut(s) 53, 261, 272, 512, 816
StyI CCWWGG 1 cut(s) 118
TaaI ACNGT 3 cut(s) 380, 431, 1097
TaiI ACGT 1 cut(s) 322
TaqI TCGA 5 cut(s) 313, 327, 518, 689, 1181
TasI AATT 1 cut(s) 4
TatI WGTACW 3 cut(s) 107, 878, 1092
TauI GCSGC 2 cut(s) 219, 484
TfiI GAWTC 1 cut(s) 409
Tru1I TTAA 5 cut(s) 528, 693, 720, 960, 1198
Tru9I TTAA 5 cut(s) 528, 693, 720, 960, 1198
TscAI CASTG 4 cut(s) 559, 784, 1041, 1102
TseFI GTSAC 1 cut(s) 1165
Tsp45I GTSAC 1 cut(s) 1165
TspDTI ATGAA 3 cut(s) 17, 671, 770
TspGWI ACGGA 3 cut(s) 234, 572, 620
TspRI CASTG 4 cut(s) 559, 784, 1041, 1102
Tth111I GACNNNGTC 1 cut(s) 514
VneI GTGCAC 1 cut(s) 1039
XceI RCATGY 1 cut(s) 748
XmiI GTMKAC 2 cut(s) 204, 433
XmnI GAANNNNTTC 1 cut(s) 540
ZrmI AGTACT 1 cut(s) 880
Zsp2I ATGCAT 1 cut(s) 542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.