Rmu_sc0019739.1_g000004

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0019739.1
OG0000075
Physical Location & Seq
Reverse (-)
8249 .. 10726
2478 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0019739.1_g000004.1.cds

Sequence Viewer

Length: 1749 bp
atggcgctggagaaccgtagtcgcggtaggcgagagggctcctctcgtgaaggggaaaggacattacgtgttgggggagaggcaggtggtgggggaactcctcgtgggggtatcgcggggagttcctggggaagcggcgagggttcgtcttgcggaattcagggtagggatgagcgaccggtggtgggggatgtgcctaaagcggagggtgttggagtatctaggattctgcttttgccacgggggcggcttttcttaggcgatacacctattgatcaacctagtctgagtatgatggaggagcagattgccgagatgaggaccacctgggcgatcccggacaacgttttgttgcgtctcttgagggatgtatttgctgtcttgcctgaacatatcagtggggcagctattgcccaatgcgttgaggcaggtgatgggtgtgttgatgttatgaaagctgaggggcgccgtcgcgccgttatcgaggatttgccatcaaacatctatgcgcgctggcggggaaggccttgcttggtaggaggccggtggcagaatccgaatatggtgcaccgggctccgaccggtttccaacccatcttgaggcaggaggttgacaagaccacgttggagtggaagcatgtggcaagggtgatgggtgcatttcccaagggggcgagggggttctatcgtctgtgcagactcccgatatttgagaggtttgagctggggaggtttccggcggatatgtcgaacgaggcctctagcaaaagtgacgccccatatgctgatgtcgatcctgataccattatcgaggggctgttgcgagaatcgcagaagacgaggttagtggacgttgacctgccggatacattgcgtgtgactgatcatcgggccggggaagaagctgctgcagaggggcgtgaggttcggagtgctcgggagcagactcaagatccccaggagtcgcccatgcaggctggtgaggcgagtgagcgtccccaagtgcgtagtggcgagcatcagtcccttgagactcaggaagtaacgaggctgtccccccgggtctcgggaggggaggatcttggtgacgtggctcaggcctcggagcccacggtggaggtggagatctctgtcgaggatctgttggaggaggtggagcggcatcagagtgataccagtgctcgtgctcgcttagggcaggatgccgttctggaacagttggaaaccgtttttggggatgatattggagatcccgtatcgccggaggtgattaccgtgttcagcggagaggcggaggtgactagccaagccgttggcgagacaagtctgacggttgagccctttgaggtgcaacctaggtccatggaaggcgtggttggggtcacccaagttaccaaggtcgagtgtcagatacgtgcgctcgtacggatggggttggggcgaagaaaaggaccgcctcgctgctacgccttgggagtcctccagttggggttggtatcgatacttgtgaactgtcatcgcaactacagccgcgtgagtgcggaagatccacgcctagggtactgggaggctcaggagaggatgatgagggctgtgaacatcaattaccatgcctcgggagagttggtggctcattttgatagaaagatagcccggctgcagggggagctgaatgccgagagggagcgggctcgtgggctacagactgctttagaccaaggtcaggtggaacgcgaggatatgaggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

582

Amino Acids

63.96

Weight (kDa)

5.2

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 74, 419
Acc36I ACCTGC 3 cut(s) 74, 419, 867
AccB1I GGYRCC 1 cut(s) 465
AccBSI CCGCTC 2 cut(s) 1159, 1687
AccII CGCG 6 cut(s) 24, 116, 474, 511, 1533, 1734
AclI AACGTT 1 cut(s) 345
AclWI GGATC 7 cut(s) 328, 788, 947, 1086, 1146, 1244, 1541
AcsI RAATTY 1 cut(s) 156
AcyI GRCGYC 2 cut(s) 466, 774
AfaI GTAC 2 cut(s) 1425, 1562
AflIII ACRYGT 1 cut(s) 67
AgeI ACCGGT 2 cut(s) 178, 581
AjiI CACGTC 1 cut(s) 1090
AjnI CCWGG 3 cut(s) 125, 326, 957
AjuI GAANNNNNNNTTGG 4 cut(s) 1215, 1247, 1359, 1391
AluBI AGCT 5 cut(s) 407, 458, 724, 905, 1669
AluI AGCT 5 cut(s) 407, 458, 724, 905, 1669
Alw21I GWGCWC 4 cut(s) 570, 937, 1183, 1189
Alw26I GTCTC 4 cut(s) 362, 1025, 1069, 1313
Alw44I GTGCAC 1 cut(s) 566
AlwI GGATC 7 cut(s) 328, 788, 947, 1086, 1146, 1244, 1541
Ama87I CYCGRG 4 cut(s) 936, 1059, 1066, 1615
AoxI GGCC 5 cut(s) 524, 541, 756, 891, 1098
ApaLI GTGCAC 1 cut(s) 566
ApeKI GCWGC 5 cut(s) 404, 905, 908, 1461, 1657
ApoI RAATTY 1 cut(s) 156
AsiGI ACCGGT 2 cut(s) 178, 581
AspA2I CCTAGG 2 cut(s) 1355, 1555
AspLEI GCGC 6 cut(s) 7, 468, 476, 511, 513, 1420
AspS9I GGNCC 4 cut(s) 321, 891, 1359, 1451
AsuC2I CCSGG 6 cut(s) 338, 572, 895, 1060, 1061, 1654
AsuHPI GGTGA 7 cut(s) 443, 661, 992, 1097, 1279, 1309, 1375
AvaI CYCGRG 4 cut(s) 936, 1059, 1066, 1615
AvaII GGWCC 3 cut(s) 321, 1359, 1451
AvrII CCTAGG 2 cut(s) 1355, 1555
BaeGI GKGCMC 1 cut(s) 570
BanI GGYRCC 1 cut(s) 465
BanII GRGCYC 5 cut(s) 41, 577, 1110, 1341, 1693
BauI CACGAG 4 cut(s) 45, 102, 1182, 1692
BbsI GAAGAC 1 cut(s) 842
Bbv12I GWGCWC 4 cut(s) 570, 937, 1183, 1189
BbvCI CCTCAGC 1 cut(s) 459
BbvI GCAGC 5 cut(s) 416, 892, 895, 1448, 1644
BccI CCATC 6 cut(s) 289, 428, 502, 602, 646, 1423
BceAI ACGGC 4 cut(s) 453, 461, 1190, 1295
BcgI CGANNNNNNTGC 2 cut(s) 547, 581
BciT130I CCWGG 3 cut(s) 127, 328, 959
BciVI GTATCC 1 cut(s) 859
BclI TGATCA 2 cut(s) 274, 883
BcnI CCSGG 6 cut(s) 338, 572, 895, 1060, 1061, 1654
BcoDI GTCTC 4 cut(s) 362, 1025, 1069, 1313
BfaI CTAG 6 cut(s) 222, 282, 762, 1302, 1356, 1556
BfmI CTRYAG 4 cut(s) 909, 1525, 1658, 1700
BfoI RGCGCY 2 cut(s) 8, 469
BfuAI ACCTGC 3 cut(s) 74, 419, 867
BfuI GTATCC 1 cut(s) 859
BglI GCCNNNNNGGC 1 cut(s) 244
BglII AGATCT 1 cut(s) 1125
BisI GCNGC 9 cut(s) 136, 248, 405, 906, 909, 1160, 1462, 1531, 1658
BlnI CCTAGG 2 cut(s) 1355, 1555
BlsI GCNGC 9 cut(s) 137, 249, 406, 907, 910, 1161, 1463, 1532, 1659
Bme1390I CCNGG 9 cut(s) 127, 328, 338, 572, 895, 959, 1060, 1061, 1654
Bme18I GGWCC 3 cut(s) 321, 1359, 1451
BmeT110I CYCGRG 4 cut(s) 936, 1059, 1066, 1615
BmgBI CACGTC 1 cut(s) 1090
BmgT120I GGNCC 4 cut(s) 321, 891, 1359, 1451
BmiI GGNNCC 4 cut(s) 40, 467, 576, 1107
BmrFI CCNGG 9 cut(s) 127, 328, 338, 572, 895, 959, 1060, 1061, 1654
BmrI ACTGGG 1 cut(s) 1573
BmsI GCATC 3 cut(s) 1027, 1171, 1192
BmuI ACTGGG 1 cut(s) 1573
BoxI GACNNNNGTC 1 cut(s) 1719
BpiI GAAGAC 1 cut(s) 842
BplI GAGNNNNNCTC 2 cut(s) 26, 58
BpmI CTGGAG 2 cut(s) 29, 1466
Bpu10I CCTNAGC 4 cut(s) 459, 1095, 1192, 1572
BpuEI CTTGAG 4 cut(s) 382, 619, 933, 1049
BpuMI CCSGG 6 cut(s) 338, 572, 895, 1060, 1061, 1654
Bsa29I ATCGAT 1 cut(s) 1499
BsaAI YACGTR 2 cut(s) 68, 1415
BsaBI GATNNNNATC 1 cut(s) 792
BsaHI GRCGYC 2 cut(s) 466, 774
BsaI GGTCTC 1 cut(s) 1069
BsaWI WCCGGW 2 cut(s) 178, 581
BsaXI ACNNNNNCTCC 4 cut(s) 1239, 1269, 1611, 1641
Bse118I RCCGGY 3 cut(s) 178, 543, 581
Bse1I ACTGG 3 cut(s) 1176, 1483, 1568
Bse3DI GCAATG 1 cut(s) 869
Bse8I GATNNNNATC 1 cut(s) 792
BseBI CCWGG 3 cut(s) 127, 328, 959
BseCI ATCGAT 1 cut(s) 1499
BseGI GGATG 7 cut(s) 175, 196, 373, 1207, 1243, 1434, 1587
BseJI GATNNNNATC 1 cut(s) 792
BseMI GCAATG 1 cut(s) 869
BseMII CTCAG 5 cut(s) 278, 450, 1049, 1109, 1586
BseNI ACTGG 3 cut(s) 1176, 1483, 1568
BsePI GCGCGC 1 cut(s) 509
BseRI GAGGAG 4 cut(s) 31, 90, 314, 1163
BseSI GKGCMC 1 cut(s) 570
BseXI GCAGC 5 cut(s) 416, 892, 895, 1448, 1644
BseYI CCCAGC 1 cut(s) 724
BsgI GTGCAG 1 cut(s) 715
Bsh1236I CGCG 6 cut(s) 24, 116, 474, 511, 1533, 1734
Bsh1285I CGRYCG 2 cut(s) 179, 582
BshFI GGCC 5 cut(s) 526, 543, 758, 893, 1100
BshNI GGYRCC 1 cut(s) 465
BshTI ACCGGT 2 cut(s) 178, 581
BshVI ATCGAT 1 cut(s) 1499
BsiEI CGRYCG 2 cut(s) 179, 582
BsiHKAI GWGCWC 4 cut(s) 570, 937, 1183, 1189
BsiHKCI CYCGRG 4 cut(s) 936, 1059, 1066, 1615
BsiWI CGTACG 1 cut(s) 1423
BslFI GGGAC 3 cut(s) 981, 1009, 1039
BsmAI GTCTC 4 cut(s) 362, 1025, 1069, 1313
BsmBI CGTCTC 1 cut(s) 362
BsmFI GGGAC 3 cut(s) 981, 1009, 1039
BsmI GAATGC 1 cut(s) 1678
BsnI GGCC 5 cut(s) 526, 543, 758, 893, 1100
Bso31I GGTCTC 1 cut(s) 1069
BsoBI CYCGRG 4 cut(s) 936, 1059, 1066, 1615
Bsp1286I GDGCHC 9 cut(s) 41, 570, 577, 937, 1110, 1183, 1189, 1341, 1693
Bsp19I CCATGG 1 cut(s) 1362
BspANI GGCC 5 cut(s) 526, 543, 758, 893, 1100
BspCNI CTCAG 5 cut(s) 279, 451, 1048, 1108, 1585
BspDI ATCGAT 1 cut(s) 1499
BspFNI CGCG 6 cut(s) 24, 116, 474, 511, 1533, 1734
BspLI GGNNCC 4 cut(s) 40, 467, 576, 1107
BspMAI CTGCAG 2 cut(s) 913, 1662
BspMI ACCTGC 3 cut(s) 74, 419, 867
BspPI GGATC 7 cut(s) 328, 788, 947, 1086, 1146, 1244, 1541
BspT107I GGYRCC 1 cut(s) 465
BspTNI GGTCTC 1 cut(s) 1069
BsrBI CCGCTC 2 cut(s) 1159, 1687
BsrDI GCAATG 1 cut(s) 869
BsrFI RCCGGY 3 cut(s) 178, 543, 581
BsrI ACTGG 3 cut(s) 1176, 1483, 1568
BssAI RCCGGY 3 cut(s) 178, 543, 581
BssHII GCGCGC 1 cut(s) 509
BssNI GRCGYC 2 cut(s) 466, 774
BssSI CACGAG 4 cut(s) 45, 102, 1182, 1692
BssT1I CCWWGG 7 cut(s) 666, 1355, 1362, 1395, 1470, 1555, 1717
Bst2BI CACGAG 4 cut(s) 45, 102, 1182, 1692
Bst2UI CCWGG 3 cut(s) 127, 328, 959
Bst4CI ACNGT 7 cut(s) 17, 1114, 1218, 1228, 1276, 1333, 1514
BstACI GRCGYC 2 cut(s) 466, 774
BstAPI GCANNNNNTGC 1 cut(s) 410
BstBAI YACGTR 2 cut(s) 68, 1415
BstC8I GCNNGC 6 cut(s) 511, 515, 975, 1016, 1189, 1689
BstDEI CTNAG 7 cut(s) 256, 287, 459, 1035, 1095, 1192, 1572
BstDSI CCRYGG 3 cut(s) 239, 1110, 1362
BstEII GGTNACC 1 cut(s) 1381
BstF5I GGATG 7 cut(s) 175, 196, 373, 1207, 1243, 1434, 1587
BstFNI CGCG 6 cut(s) 24, 116, 474, 511, 1533, 1734
BstH2I RGCGCY 2 cut(s) 8, 469
BstHHI GCGC 6 cut(s) 7, 468, 476, 511, 513, 1420
BstMAI GTCTC 4 cut(s) 362, 1025, 1069, 1313
BstMCI CGRYCG 2 cut(s) 179, 582
BstMWI GCNNNNNNNGC 8 cut(s) 244, 410, 523, 782, 829, 983, 1527, 1666
BstNI CCWGG 3 cut(s) 127, 328, 959
BstNSI RCATGY 1 cut(s) 641
BstPAI GACNNNNGTC 1 cut(s) 1719
BstPI GGTNACC 1 cut(s) 1381
BstSCI CCNGG 9 cut(s) 125, 326, 336, 570, 893, 957, 1058, 1059, 1652
BstSFI CTRYAG 4 cut(s) 909, 1525, 1658, 1700
BstSLI GKGCMC 1 cut(s) 570
BstUI CGCG 6 cut(s) 24, 116, 474, 511, 1533, 1734
BstV1I GCAGC 5 cut(s) 416, 892, 895, 1448, 1644
BstV2I GAAGAC 1 cut(s) 842
BstX2I RGATCY 6 cut(s) 952, 1078, 1125, 1138, 1249, 1546
BstXI CCANNNNNNTGG 1 cut(s) 1313
BstYI RGATCY 6 cut(s) 952, 1078, 1125, 1138, 1249, 1546
Bsu15I ATCGAT 1 cut(s) 1499
BsuI GTATCC 1 cut(s) 859
BsuRI GGCC 5 cut(s) 526, 543, 758, 893, 1100
BsuTUI ATCGAT 1 cut(s) 1499
BtgI CCRYGG 3 cut(s) 239, 1110, 1362
BtgZI GCGATG 1 cut(s) 1502
BtrI CACGTC 1 cut(s) 1090
BtsCI GGATG 7 cut(s) 175, 196, 373, 1207, 1243, 1434, 1587
BtsIMutI CAGTG 2 cut(s) 403, 1183
BveI ACCTGC 3 cut(s) 74, 419, 867
Cac8I GCNNGC 6 cut(s) 511, 515, 975, 1016, 1189, 1689
CfoI GCGC 6 cut(s) 7, 468, 476, 511, 513, 1420
Cfr10I RCCGGY 3 cut(s) 178, 543, 581
Cfr13I GGNCC 4 cut(s) 321, 891, 1359, 1451
Cfr9I CCCGGG 1 cut(s) 1059
ClaI ATCGAT 1 cut(s) 1499
CseI GACGC 3 cut(s) 344, 782, 983
Csp6I GTAC 2 cut(s) 1424, 1561
CspAI ACCGGT 2 cut(s) 178, 581
CviAII CATG 4 cut(s) 638, 970, 1363, 1610
CviQI GTAC 2 cut(s) 1424, 1561
DdeI CTNAG 7 cut(s) 256, 287, 459, 1035, 1095, 1192, 1572
DinI GGCGCC 1 cut(s) 467
EciI GGCGGA 2 cut(s) 755, 1307
Eco130I CCWWGG 7 cut(s) 666, 1355, 1362, 1395, 1470, 1555, 1717
Eco147I AGGCCT 3 cut(s) 526, 758, 1100
Eco24I GRGCYC 5 cut(s) 41, 577, 1110, 1341, 1693
Eco31I GGTCTC 1 cut(s) 1069
Eco47I GGWCC 3 cut(s) 321, 1359, 1451
Eco88I CYCGRG 4 cut(s) 936, 1059, 1066, 1615
Eco91I GGTNACC 1 cut(s) 1381
EcoO65I GGTNACC 1 cut(s) 1381
EcoRI GAATTC 1 cut(s) 156
EcoRII CCWGG 3 cut(s) 125, 326, 957
EcoT14I CCWWGG 7 cut(s) 666, 1355, 1362, 1395, 1470, 1555, 1717
EcoT38I GRGCYC 5 cut(s) 41, 577, 1110, 1341, 1693
EgeI GGCGCC 1 cut(s) 467
EheI GGCGCC 1 cut(s) 467
ErhI CCWWGG 7 cut(s) 666, 1355, 1362, 1395, 1470, 1555, 1717
Esp3I CGTCTC 1 cut(s) 362
FaeI CATG 4 cut(s) 641, 973, 1366, 1613
FaqI GGGAC 3 cut(s) 981, 1009, 1039
FatI CATG 4 cut(s) 637, 969, 1362, 1609
FauI CCCGC 3 cut(s) 109, 510, 1680
FauNDI CATATG 1 cut(s) 781
FbaI TGATCA 2 cut(s) 274, 883
Fnu4HI GCNGC 9 cut(s) 136, 248, 405, 906, 909, 1160, 1462, 1531, 1658
FokI GGATG 7 cut(s) 182, 203, 380, 1214, 1250, 1441, 1594
FriOI GRGCYC 5 cut(s) 41, 577, 1110, 1341, 1693
Fsp4HI GCNGC 9 cut(s) 136, 248, 405, 906, 909, 1160, 1462, 1531, 1658
FspBI CTAG 6 cut(s) 222, 282, 762, 1302, 1356, 1556
GlaI GCGC 6 cut(s) 6, 467, 475, 510, 512, 1419
GluI GCNGC 9 cut(s) 136, 248, 405, 906, 909, 1160, 1462, 1531, 1658
GsaI CCCAGC 1 cut(s) 728
GsuI CTGGAG 2 cut(s) 29, 1466
HaeII RGCGCY 2 cut(s) 8, 469
HaeIII GGCC 5 cut(s) 526, 543, 758, 893, 1100
HgaI GACGC 3 cut(s) 344, 782, 983
HhaI GCGC 6 cut(s) 7, 468, 476, 511, 513, 1420
Hin1I GRCGYC 2 cut(s) 466, 774
Hin1II CATG 4 cut(s) 641, 973, 1366, 1613
Hin6I GCGC 6 cut(s) 5, 466, 474, 509, 511, 1418
HinP1I GCGC 6 cut(s) 5, 466, 474, 509, 511, 1418
HincII GTYRAC 2 cut(s) 613, 856
HindII GTYRAC 2 cut(s) 613, 856
HinfI GANTC 8 cut(s) 226, 553, 699, 827, 946, 962, 1033, 1476
HphI GGTGA 7 cut(s) 443, 661, 992, 1097, 1279, 1309, 1375
Hpy166II GTNNAC 6 cut(s) 568, 613, 850, 856, 1510, 1597
Hpy188I TCNGA 8 cut(s) 288, 558, 579, 930, 1105, 1167, 1329, 1410
Hpy8I GTNNAC 6 cut(s) 568, 613, 850, 856, 1510, 1597
Hpy99I CGWCG 1 cut(s) 474
HpyAV CCTTC 3 cut(s) 44, 516, 1361
HpyCH4III ACNGT 7 cut(s) 17, 1114, 1218, 1228, 1276, 1333, 1514
HpyCH4IV ACGT 6 cut(s) 67, 345, 623, 852, 1089, 1414
HpyCH4V TGCA 7 cut(s) 568, 659, 696, 911, 973, 1351, 1660
HpyF10VI GCNNNNNNNGC 8 cut(s) 244, 410, 523, 782, 829, 983, 1527, 1666
HpyF3I CTNAG 7 cut(s) 256, 287, 459, 1035, 1095, 1192, 1572
HpySE526I ACGT 6 cut(s) 67, 345, 623, 852, 1089, 1414
Hsp92I GRCGYC 2 cut(s) 466, 774
Hsp92II CATG 4 cut(s) 641, 973, 1366, 1613
HspAI GCGC 6 cut(s) 5, 466, 474, 509, 511, 1418
KasI GGCGCC 1 cut(s) 465
Ksp22I TGATCA 2 cut(s) 274, 883
LmnI GCTCC 8 cut(s) 44, 301, 580, 940, 1105, 1156, 1666, 1684
Lsp1109I GCAGC 5 cut(s) 416, 892, 895, 1448, 1644
LweI GCATC 3 cut(s) 1027, 1171, 1192
MaeI CTAG 6 cut(s) 222, 282, 762, 1302, 1356, 1556
MaeII ACGT 6 cut(s) 67, 345, 623, 852, 1089, 1414
MaeIII GTNAC 7 cut(s) 770, 877, 1042, 1085, 1297, 1381, 1390
MbiI CCGCTC 2 cut(s) 1159, 1687
MboII GAAGA 4 cut(s) 847, 911, 1455, 1556
MflI RGATCY 6 cut(s) 952, 1078, 1125, 1138, 1249, 1546
MhlI GDGCHC 9 cut(s) 41, 570, 577, 937, 1110, 1183, 1189, 1341, 1693
MluCI AATT 2 cut(s) 156, 1603
Mly113I GGCGCC 1 cut(s) 466
MlyI GAGTC 5 cut(s) 693, 940, 971, 1027, 1485
MmeI TCCRAC 6 cut(s) 193, 602, 606, 613, 1125, 1200
MslI CAYNNNNRTG 2 cut(s) 396, 1167
MspA1I CMGCKG 1 cut(s) 1284
MspR9I CCNGG 9 cut(s) 127, 328, 338, 572, 895, 959, 1060, 1061, 1654
Mva1269I GAATGC 1 cut(s) 1678
MvaI CCWGG 3 cut(s) 127, 328, 959
MvnI CGCG 6 cut(s) 24, 116, 474, 511, 1533, 1734
MwoI GCNNNNNNNGC 8 cut(s) 244, 410, 523, 782, 829, 983, 1527, 1666
NarI GGCGCC 1 cut(s) 466
NciI CCSGG 6 cut(s) 338, 572, 895, 1060, 1061, 1654
NcoI CCATGG 1 cut(s) 1362
NdeI CATATG 1 cut(s) 781
NlaIII CATG 4 cut(s) 641, 973, 1366, 1613
NlaIV GGNNCC 4 cut(s) 40, 467, 576, 1107
NmeAIII GCCGAG 2 cut(s) 337, 1702
NmuCI GTSAC 5 cut(s) 770, 877, 1085, 1297, 1381
NspI RCATGY 1 cut(s) 641
PaqCI CACCTGC 2 cut(s) 74, 419
PauI GCGCGC 1 cut(s) 509
PceI AGGCCT 3 cut(s) 526, 758, 1100
PcsI WCGNNNNNNNCGW 2 cut(s) 28, 836
PctI GAATGC 1 cut(s) 1678
PfeI GAWTC 3 cut(s) 226, 553, 827
Pfl23II CGTACG 1 cut(s) 1423
PfoI TCCNGGA 1 cut(s) 336
PinAI ACCGGT 2 cut(s) 178, 581
PkrI GCNGC 9 cut(s) 137, 249, 406, 907, 910, 1161, 1463, 1532, 1659
PleI GAGTC 5 cut(s) 693, 940, 970, 1027, 1484
PluTI GGCGCC 1 cut(s) 469
PpsI GAGTC 5 cut(s) 693, 940, 970, 1027, 1484
Ppu21I YACGTR 2 cut(s) 68, 1415
PshAI GACNNNNGTC 1 cut(s) 1719
Psp1406I AACGTT 1 cut(s) 345
Psp6I CCWGG 3 cut(s) 125, 326, 957
PspEI GGTNACC 1 cut(s) 1381
PspFI CCCAGC 1 cut(s) 724
PspGI CCWGG 3 cut(s) 125, 326, 957
PspLI CGTACG 1 cut(s) 1423
PspN4I GGNNCC 4 cut(s) 40, 467, 576, 1107
PspPI GGNCC 4 cut(s) 321, 891, 1359, 1451
PsrI GAACNNNNNNTAC 2 cut(s) 1589, 1621
PstI CTGCAG 2 cut(s) 913, 1662
PsuI RGATCY 6 cut(s) 952, 1078, 1125, 1138, 1249, 1546
PteI GCGCGC 1 cut(s) 509
RsaI GTAC 2 cut(s) 1425, 1562
RsaNI GTAC 2 cut(s) 1424, 1561
RseI CAYNNNNRTG 2 cut(s) 396, 1167
SatI GCNGC 9 cut(s) 136, 248, 405, 906, 909, 1160, 1462, 1531, 1658
Sau96I GGNCC 4 cut(s) 321, 891, 1359, 1451
SchI GAGTC 5 cut(s) 693, 940, 971, 1027, 1485
ScrFI CCNGG 9 cut(s) 127, 328, 338, 572, 895, 959, 1060, 1061, 1654
SduI GDGCHC 9 cut(s) 41, 570, 577, 937, 1110, 1183, 1189, 1341, 1693
SfaNI GCATC 3 cut(s) 1027, 1171, 1192
SfcI CTRYAG 4 cut(s) 909, 1525, 1658, 1700
SfoI GGCGCC 1 cut(s) 467
SinI GGWCC 3 cut(s) 321, 1359, 1451
SmaI CCCGGG 1 cut(s) 1061
SmiMI CAYNNNNRTG 2 cut(s) 396, 1167
SmlI CTYRAG 4 cut(s) 361, 598, 948, 1028
SmoI CTYRAG 4 cut(s) 361, 598, 948, 1028
Sse9I AATT 2 cut(s) 156, 1603
SseBI AGGCCT 3 cut(s) 526, 758, 1100
SspDI GGCGCC 1 cut(s) 465
SspMI CTAG 6 cut(s) 222, 282, 762, 1302, 1356, 1556
StuI AGGCCT 3 cut(s) 526, 758, 1100
StyD4I CCNGG 9 cut(s) 125, 326, 336, 570, 893, 957, 1058, 1059, 1652
StyI CCWWGG 7 cut(s) 666, 1355, 1362, 1395, 1470, 1555, 1717
TaaI ACNGT 7 cut(s) 17, 1114, 1218, 1228, 1276, 1333, 1514
TaiI ACGT 6 cut(s) 70, 348, 626, 855, 1092, 1417
TaqI TCGA 7 cut(s) 483, 749, 792, 810, 1134, 1401, 1499
TasI AATT 2 cut(s) 156, 1603
TauI GCSGC 4 cut(s) 138, 250, 1162, 1533
TfiI GAWTC 3 cut(s) 226, 553, 827
TscAI CASTG 2 cut(s) 403, 1183
TseFI GTSAC 5 cut(s) 770, 877, 1085, 1297, 1381
TseI GCWGC 5 cut(s) 404, 905, 908, 1461, 1657
Tsp45I GTSAC 5 cut(s) 770, 877, 1085, 1297, 1381
TspDTI ATGAA 1 cut(s) 467
TspGWI ACGGA 1 cut(s) 1441
TspMI CCCGGG 1 cut(s) 1059
TspRI CASTG 2 cut(s) 403, 1183
VneI GTGCAC 1 cut(s) 566
VpaK11BI GGWCC 3 cut(s) 321, 1359, 1451
XapI RAATTY 1 cut(s) 156
XceI RCATGY 1 cut(s) 641
XcmI CCANNNNNNNNNTGG 3 cut(s) 1007, 1117, 1369
XmaI CCCGGG 1 cut(s) 1059
XmaJI CCTAGG 2 cut(s) 1355, 1555
XspI CTAG 6 cut(s) 222, 282, 762, 1302, 1356, 1556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.