Rroxscaffold_6G00395010

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000075
Physical Location & Seq
Forward (+)
15887346 .. 15887882
537 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00395010.1

Sequence Viewer

Length: 459 bp
ATGTCGAACAAGGCCCCTAGCAAAAGTGACGCCCGTATCTTGATGTCGATCCCGATACCATTATTTAGGGATGGTTGCGGGGAGTCGCGGATGGCGAGGCGAGTGGAAGTTGACCTGCTGGATAGGTATTTCAATCAACGAGCCGAGGAAGAAGTTGGTGTTGAGGGGCATGAAGGTGGCGTTGCCGGGGAACCAACTCAAGATGTCCGGGGGATGGCCACGCAGGCGGTGGGGGCGAGTGAGTACCCCCGAGTGCGTGGTGGCGAGAGTCGGTCCCGAGACTCGGGAGGTGACGAGCGGTTCCCGGGTCTGGCGGGGAGGGAGGGTCTTGGTGAAGTGGTTCGTGTCTCGGAGCCCACGGTGGAGGTGGAGATATCCGTCGAGGATTTGTTGGATAAGGTGGAGCGGCGTCGAGCAATACCGGCGCTCGTGCTAGCTTGGTGTAGGATGCGGTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

152

Amino Acids

16.74

Weight (kDa)

5.23

Isoelectric Point (pI)

52.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 123
AccBSI CCGCTC 2 cut(s) 298, 406
AccII CGCG 1 cut(s) 88
AciI CCGC 7 cut(s) 78, 88, 227, 298, 314, 406, 451
AclWI GGATC 1 cut(s) 43
AcoI YGGCCR 1 cut(s) 216
AcyI GRCGYC 2 cut(s) 30, 409
AfaI GTAC 1 cut(s) 245
AfiI CCNNNNNNNGG 3 cut(s) 214, 283, 310
AgsI TTSAA 1 cut(s) 133
AluBI AGCT 1 cut(s) 437
AluI AGCT 1 cut(s) 437
Alw26I GTCTC 2 cut(s) 273, 352
AlwI GGATC 1 cut(s) 43
Ama87I CYCGRG 4 cut(s) 249, 276, 283, 304
AoxI GGCC 2 cut(s) 12, 216
Asp700I GAANNNNTTC 1 cut(s) 339
AspLEI GCGC 1 cut(s) 427
AspS9I GGNCC 2 cut(s) 13, 273
AsuC2I CCSGG 4 cut(s) 187, 209, 305, 306
AsuHPI GGTGA 2 cut(s) 302, 344
AsuNHI GCTAGC 1 cut(s) 433
AvaI CYCGRG 4 cut(s) 249, 276, 283, 304
AvaII GGWCC 1 cut(s) 273
BaeI ACNNNNGTAYC 2 cut(s) 19, 52
BalI TGGCCA 1 cut(s) 218
BanII GRGCYC 1 cut(s) 357
BauI CACGAG 1 cut(s) 428
BccI CCATC 3 cut(s) 65, 85, 208
BcnI CCSGG 4 cut(s) 187, 209, 305, 306
BcoDI GTCTC 2 cut(s) 273, 352
BfaI CTAG 3 cut(s) 18, 434, 457
BfoI RGCGCY 1 cut(s) 428
BfuAI ACCTGC 1 cut(s) 123
BglI GCCNNNNNGGC 1 cut(s) 224
BisI GCNGC 1 cut(s) 407
BlsI GCNGC 1 cut(s) 408
Bme1390I CCNGG 4 cut(s) 187, 209, 305, 306
Bme18I GGWCC 1 cut(s) 273
BmeT110I CYCGRG 4 cut(s) 249, 276, 283, 304
BmgT120I GGNCC 2 cut(s) 13, 273
BmiI GGNNCC 5 cut(s) 15, 192, 275, 302, 354
BmrFI CCNGG 4 cut(s) 187, 209, 305, 306
BmsI GCATC 1 cut(s) 438
BmtI GCTAGC 1 cut(s) 437
BpuEI CTTGAG 1 cut(s) 183
BpuMI CCSGG 4 cut(s) 187, 209, 305, 306
BsaBI GATNNNNATC 1 cut(s) 47
BsaHI GRCGYC 2 cut(s) 30, 409
BsaJI CCNNGG 5 cut(s) 144, 186, 208, 304, 357
BsaXI ACNNNNNCTCC 2 cut(s) 310, 340
Bsc4I CCNNNNNNNGG 3 cut(s) 214, 283, 310
Bse118I RCCGGY 1 cut(s) 421
Bse8I GATNNNNATC 1 cut(s) 47
BseDI CCNNGG 5 cut(s) 144, 186, 208, 304, 357
BseGI GGATG 4 cut(s) 76, 96, 219, 453
BseJI GATNNNNATC 1 cut(s) 47
BseLI CCNNNNNNNGG 3 cut(s) 214, 283, 310
Bsh1236I CGCG 1 cut(s) 88
BshFI GGCC 2 cut(s) 14, 218
BsiHKCI CYCGRG 4 cut(s) 249, 276, 283, 304
BsiSI CCGG 4 cut(s) 186, 208, 305, 422
BslFI GGGAC 1 cut(s) 259
BslI CCNNNNNNNGG 3 cut(s) 214, 283, 310
BsmAI GTCTC 2 cut(s) 273, 352
BsmFI GGGAC 1 cut(s) 259
BsnI GGCC 2 cut(s) 14, 218
BsoBI CYCGRG 4 cut(s) 249, 276, 283, 304
Bsp1286I GDGCHC 1 cut(s) 357
Bsp143I GATC 1 cut(s) 48
BspACI CCGC 7 cut(s) 78, 88, 227, 298, 314, 406, 451
BspANI GGCC 2 cut(s) 14, 218
BspFNI CGCG 1 cut(s) 88
BspLI GGNNCC 5 cut(s) 15, 192, 275, 302, 354
BspMI ACCTGC 1 cut(s) 123
BspOI GCTAGC 1 cut(s) 437
BspPI GGATC 1 cut(s) 43
BsrBI CCGCTC 2 cut(s) 298, 406
BsrFI RCCGGY 1 cut(s) 421
BssAI RCCGGY 1 cut(s) 421
BssECI CCNNGG 5 cut(s) 144, 186, 208, 304, 357
BssMI GATC 1 cut(s) 48
BssNI GRCGYC 2 cut(s) 30, 409
BssSI CACGAG 1 cut(s) 428
Bst2BI CACGAG 1 cut(s) 428
Bst4CI ACNGT 1 cut(s) 361
BstACI GRCGYC 2 cut(s) 30, 409
BstC8I GCNNGC 2 cut(s) 225, 435
BstDSI CCRYGG 1 cut(s) 357
BstF5I GGATG 4 cut(s) 76, 96, 219, 453
BstFNI CGCG 1 cut(s) 88
BstH2I RGCGCY 1 cut(s) 428
BstHHI GCGC 1 cut(s) 427
BstKTI GATC 1 cut(s) 51
BstMAI GTCTC 2 cut(s) 273, 352
BstMBI GATC 1 cut(s) 48
BstMWI GCNNNNNNNGC 3 cut(s) 224, 233, 422
BstSCI CCNGG 4 cut(s) 185, 207, 303, 304
BstUI CGCG 1 cut(s) 88
BsuRI GGCC 2 cut(s) 14, 218
BtgI CCRYGG 1 cut(s) 357
BtsCI GGATG 4 cut(s) 76, 96, 219, 453
BveI ACCTGC 1 cut(s) 123
Cac8I GCNNGC 2 cut(s) 225, 435
CfoI GCGC 1 cut(s) 427
Cfr10I RCCGGY 1 cut(s) 421
Cfr13I GGNCC 2 cut(s) 13, 273
Cfr9I CCCGGG 1 cut(s) 304
CseI GACGC 2 cut(s) 38, 398
Csp6I GTAC 1 cut(s) 244
CviAII CATG 1 cut(s) 170
CviJI RGCY 5 cut(s) 14, 143, 218, 355, 437
CviKI_1 RGCY 5 cut(s) 14, 143, 218, 355, 437
CviQI GTAC 1 cut(s) 244
DpnI GATC 1 cut(s) 50
DpnII GATC 1 cut(s) 48
EaeI YGGCCR 1 cut(s) 216
Eco24I GRGCYC 1 cut(s) 357
Eco32I GATATC 1 cut(s) 375
Eco47I GGWCC 1 cut(s) 273
Eco88I CYCGRG 4 cut(s) 249, 276, 283, 304
EcoO109I RGGNCCY 1 cut(s) 13
EcoRV GATATC 1 cut(s) 375
EcoT38I GRGCYC 1 cut(s) 357
FaeI CATG 1 cut(s) 173
FaiI YATR 1 cut(s) 171
FaqI GGGAC 1 cut(s) 259
FatI CATG 1 cut(s) 169
FauI CCCGC 2 cut(s) 71, 307
Fnu4HI GCNGC 1 cut(s) 407
FokI GGATG 3 cut(s) 83, 103, 226
FriOI GRGCYC 1 cut(s) 357
Fsp4HI GCNGC 1 cut(s) 407
FspBI CTAG 3 cut(s) 18, 434, 457
GlaI GCGC 1 cut(s) 426
GluI GCNGC 1 cut(s) 407
HaeII RGCGCY 1 cut(s) 428
HaeIII GGCC 2 cut(s) 14, 218
HapII CCGG 4 cut(s) 186, 208, 305, 422
HgaI GACGC 2 cut(s) 38, 398
HhaI GCGC 1 cut(s) 427
Hin1I GRCGYC 2 cut(s) 30, 409
Hin1II CATG 1 cut(s) 173
Hin6I GCGC 1 cut(s) 425
HinP1I GCGC 1 cut(s) 425
HincII GTYRAC 1 cut(s) 112
HindII GTYRAC 1 cut(s) 112
HinfI GANTC 3 cut(s) 83, 268, 281
HpaII CCGG 4 cut(s) 186, 208, 305, 422
HphI GGTGA 2 cut(s) 302, 344
Hpy166II GTNNAC 1 cut(s) 112
Hpy188I TCNGA 1 cut(s) 352
Hpy188III TCNNGA 5 cut(s) 40, 52, 200, 276, 285
Hpy8I GTNNAC 1 cut(s) 112
Hpy99I CGWCG 2 cut(s) 383, 414
HpyAV CCTTC 1 cut(s) 167
HpyCH4III ACNGT 1 cut(s) 361
HpyF10VI GCNNNNNNNGC 3 cut(s) 224, 233, 422
Hsp92I GRCGYC 2 cut(s) 30, 409
Hsp92II CATG 1 cut(s) 173
HspAI GCGC 1 cut(s) 425
Kzo9I GATC 1 cut(s) 48
LmnI GCTCC 2 cut(s) 352, 403
LpnPI CCDG 8 cut(s) 104, 128, 199, 209, 221, 296, 318, 435
LweI GCATC 1 cut(s) 438
MaeI CTAG 3 cut(s) 18, 434, 457
MaeIII GTNAC 2 cut(s) 26, 290
MalI GATC 1 cut(s) 50
MbiI CCGCTC 2 cut(s) 298, 406
MboI GATC 1 cut(s) 48
MboII GAAGA 1 cut(s) 161
MhlI GDGCHC 1 cut(s) 357
MlsI TGGCCA 1 cut(s) 218
MluNI TGGCCA 1 cut(s) 218
MlyI GAGTC 3 cut(s) 92, 275, 277
MmeI TCCRAC 1 cut(s) 372
MnlI CCTC 8 cut(s) 90, 139, 157, 281, 312, 316, 358, 376
Mox20I TGGCCA 1 cut(s) 218
MroXI GAANNNNTTC 1 cut(s) 339
MscI TGGCCA 1 cut(s) 218
MslI CAYNNNNRTG 1 cut(s) 174
Msp20I TGGCCA 1 cut(s) 218
MspI CCGG 4 cut(s) 186, 208, 305, 422
MspR9I CCNGG 4 cut(s) 187, 209, 305, 306
MvnI CGCG 1 cut(s) 88
MwoI GCNNNNNNNGC 3 cut(s) 224, 233, 422
NciI CCSGG 4 cut(s) 187, 209, 305, 306
NdeII GATC 1 cut(s) 48
NheI GCTAGC 1 cut(s) 433
NlaIII CATG 1 cut(s) 173
NlaIV GGNNCC 5 cut(s) 15, 192, 275, 302, 354
NmeAIII GCCGAG 1 cut(s) 169
NmuCI GTSAC 2 cut(s) 26, 290
PcsI WCGNNNNNNNCGW 1 cut(s) 92
PdmI GAANNNNTTC 1 cut(s) 339
PkrI GCNGC 1 cut(s) 408
PleI GAGTC 3 cut(s) 91, 275, 276
PpsI GAGTC 3 cut(s) 91, 275, 276
PspN4I GGNNCC 5 cut(s) 15, 192, 275, 302, 354
PspPI GGNCC 2 cut(s) 13, 273
RsaI GTAC 1 cut(s) 245
RsaNI GTAC 1 cut(s) 244
RseI CAYNNNNRTG 1 cut(s) 174
SatI GCNGC 1 cut(s) 407
Sau3AI GATC 1 cut(s) 48
Sau96I GGNCC 2 cut(s) 13, 273
SchI GAGTC 3 cut(s) 92, 275, 277
ScrFI CCNGG 4 cut(s) 187, 209, 305, 306
SduI GDGCHC 1 cut(s) 357
SetI ASST 7 cut(s) 117, 128, 178, 292, 369, 402, 439
SfaNI GCATC 1 cut(s) 438
SinI GGWCC 1 cut(s) 273
SmaI CCCGGG 1 cut(s) 306
SmiMI CAYNNNNRTG 1 cut(s) 174
SmlI CTYRAG 1 cut(s) 198
SmoI CTYRAG 1 cut(s) 198
SsiI CCGC 7 cut(s) 78, 88, 227, 298, 314, 406, 451
SspMI CTAG 3 cut(s) 18, 434, 457
StyD4I CCNGG 4 cut(s) 185, 207, 303, 304
TaaI ACNGT 1 cut(s) 361
TaqI TCGA 4 cut(s) 5, 47, 381, 412
TaqII GACCGA 1 cut(s) 261
TauI GCSGC 1 cut(s) 409
TseFI GTSAC 2 cut(s) 26, 290
Tsp45I GTSAC 2 cut(s) 26, 290
TspDTI ATGAA 1 cut(s) 186
TspGWI ACGGA 1 cut(s) 367
TspMI CCCGGG 1 cut(s) 304
VpaK11BI GGWCC 1 cut(s) 273
XcmI CCANNNNNNNNNTGG 2 cut(s) 226, 364
XmaI CCCGGG 1 cut(s) 304
XmnI GAANNNNTTC 1 cut(s) 339
XspI CTAG 3 cut(s) 18, 434, 457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.