Rroxscaffold_154G00447930

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000154
OG0000075
Physical Location & Seq
Forward (+)
7473 .. 15189
7717 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_154G00447930.1

Sequence Viewer

Length: 405 bp
ATGAACAAGGCCTTCTCGGATAGGGCCCGCACTCGATCCGGGATGGTATCGCCACCGGTTGGATTGATCGGGATAAGATGGCTCGGGATATGTAGGCCAAGAAGGCGGCGAGATCTTAAGTCCGTGCCTCAAGCGTCCGTGGAGGTGCCGGGATTGAGATCCGGAAGTAGGTTGTACGAGAGCATGTGTCGGGCCGGCCGGCGATCTCGAGCAAGGAGCGAGAGGAGTCCTTCTAGGGCCAAATGTTTCAACCGTTTGGGAAAGGGTCGAATCGAGCTATACACGGGATGTATCGCCTCGCTATTATCTCTATCGGTCTCGCTTATCCGCAAAACGTACGAAAGTCATATGGAAGACCGGTGTGCCGCATTCGACTCTCCGATGCCTATGTCTATATCGTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

134

Amino Acids

15.02

Weight (kDa)

11.27

Isoelectric Point (pI)

84.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 403
AccB1I GGYRCC 1 cut(s) 145
AccB7I CCANNNNNTGG 1 cut(s) 59
AccIII TCCGGA 1 cut(s) 161
AciI CCGC 4 cut(s) 28, 106, 328, 366
AclWI GGATC 2 cut(s) 30, 153
AcoI YGGCCR 1 cut(s) 196
AfaI GTAC 2 cut(s) 176, 338
AfiI CCNNNNNNNGG 2 cut(s) 59, 168
AflII CTTAAG 1 cut(s) 116
AgeI ACCGGT 2 cut(s) 55, 357
AgsI TTSAA 1 cut(s) 250
AluBI AGCT 1 cut(s) 277
AluI AGCT 1 cut(s) 277
Alw26I GTCTC 1 cut(s) 322
AlwI GGATC 2 cut(s) 30, 153
Ama87I CYCGRG 2 cut(s) 83, 207
Aor13HI TCCGGA 1 cut(s) 161
AoxI GGCC 6 cut(s) 9, 24, 95, 192, 196, 237
ApaI GGGCCC 1 cut(s) 28
AsiGI ACCGGT 2 cut(s) 55, 357
AspS9I GGNCC 4 cut(s) 24, 25, 192, 237
AsuC2I CCSGG 2 cut(s) 40, 150
AvaI CYCGRG 2 cut(s) 83, 207
BaeGI GKGCMC 1 cut(s) 28
BanI GGYRCC 1 cut(s) 145
BanII GRGCYC 1 cut(s) 28
BbsI GAAGAC 1 cut(s) 360
BccI CCATC 2 cut(s) 37, 72
BcnI CCSGG 2 cut(s) 40, 150
BcoDI GTCTC 1 cut(s) 322
BfaI CTAG 1 cut(s) 234
BfrI CTTAAG 1 cut(s) 116
BglI GCCNNNNNGGC 1 cut(s) 103
BglII AGATCT 1 cut(s) 112
BisI GCNGC 2 cut(s) 107, 366
BlsI GCNGC 2 cut(s) 108, 367
Bme1390I CCNGG 2 cut(s) 40, 150
BmeT110I CYCGRG 2 cut(s) 83, 207
BmgT120I GGNCC 4 cut(s) 24, 25, 192, 237
BmiI GGNNCC 2 cut(s) 26, 147
BmrFI CCNGG 2 cut(s) 40, 150
BmsI GCATC 1 cut(s) 372
BpiI GAAGAC 1 cut(s) 360
BpuEI CTTGAG 1 cut(s) 114
BpuMI CCSGG 2 cut(s) 40, 150
BsaBI GATNNNNATC 1 cut(s) 157
BsaI GGTCTC 1 cut(s) 322
BsaJI CCNNGG 1 cut(s) 138
BsaWI WCCGGW 3 cut(s) 55, 161, 357
Bsc4I CCNNNNNNNGG 2 cut(s) 59, 168
Bse118I RCCGGY 4 cut(s) 55, 194, 198, 357
Bse8I GATNNNNATC 1 cut(s) 157
BseAI TCCGGA 1 cut(s) 161
BseDI CCNNGG 1 cut(s) 138
BseGI GGATG 2 cut(s) 48, 293
BseJI GATNNNNATC 1 cut(s) 157
BseLI CCNNNNNNNGG 2 cut(s) 59, 168
BseRI GAGGAG 1 cut(s) 238
BseSI GKGCMC 1 cut(s) 28
BseX3I CGGCCG 1 cut(s) 196
Bsh1285I CGRYCG 1 cut(s) 199
BshFI GGCC 6 cut(s) 11, 26, 97, 194, 198, 239
BshNI GGYRCC 1 cut(s) 145
BshTI ACCGGT 2 cut(s) 55, 357
BsiEI CGRYCG 1 cut(s) 199
BsiHKCI CYCGRG 2 cut(s) 83, 207
BsiSI CCGG 7 cut(s) 39, 56, 149, 162, 195, 199, 358
BsiWI CGTACG 1 cut(s) 336
BslI CCNNNNNNNGG 2 cut(s) 59, 168
BsmAI GTCTC 1 cut(s) 322
BsmI GAATGC 1 cut(s) 368
BsnI GGCC 6 cut(s) 11, 26, 97, 194, 198, 239
Bso31I GGTCTC 1 cut(s) 322
BsoBI CYCGRG 2 cut(s) 83, 207
Bsp120I GGGCCC 1 cut(s) 24
Bsp1286I GDGCHC 1 cut(s) 28
Bsp13I TCCGGA 1 cut(s) 161
Bsp143I GATC 5 cut(s) 35, 66, 112, 158, 203
BspACI CCGC 4 cut(s) 28, 106, 328, 366
BspANI GGCC 6 cut(s) 11, 26, 97, 194, 198, 239
BspEI TCCGGA 1 cut(s) 161
BspLI GGNNCC 2 cut(s) 26, 147
BspPI GGATC 2 cut(s) 30, 153
BspT107I GGYRCC 1 cut(s) 145
BspTI CTTAAG 1 cut(s) 116
BspTNI GGTCTC 1 cut(s) 322
BsrFI RCCGGY 4 cut(s) 55, 194, 198, 357
BssAI RCCGGY 4 cut(s) 55, 194, 198, 357
BssECI CCNNGG 1 cut(s) 138
BssMI GATC 5 cut(s) 35, 66, 112, 158, 203
Bst4CI ACNGT 1 cut(s) 254
BstAFI CTTAAG 1 cut(s) 116
BstC8I GCNNGC 3 cut(s) 28, 196, 200
BstDSI CCRYGG 1 cut(s) 138
BstF5I GGATG 2 cut(s) 48, 293
BstKTI GATC 5 cut(s) 38, 69, 115, 161, 206
BstMAI GTCTC 1 cut(s) 322
BstMBI GATC 5 cut(s) 35, 66, 112, 158, 203
BstMCI CGRYCG 1 cut(s) 199
BstMWI GCNNNNNNNGC 1 cut(s) 103
BstNSI RCATGY 1 cut(s) 187
BstSCI CCNGG 2 cut(s) 38, 148
BstSLI GKGCMC 1 cut(s) 28
BstV2I GAAGAC 1 cut(s) 360
BstX2I RGATCY 2 cut(s) 112, 158
BstYI RGATCY 2 cut(s) 112, 158
BstZI CGGCCG 1 cut(s) 196
BsuRI GGCC 6 cut(s) 11, 26, 97, 194, 198, 239
BtgI CCRYGG 1 cut(s) 138
BtsCI GGATG 2 cut(s) 48, 293
Cac8I GCNNGC 3 cut(s) 28, 196, 200
Cfr10I RCCGGY 4 cut(s) 55, 194, 198, 357
Cfr13I GGNCC 4 cut(s) 24, 25, 192, 237
CseI GACGC 1 cut(s) 123
Csp6I GTAC 2 cut(s) 175, 337
CspAI ACCGGT 2 cut(s) 55, 357
CviAII CATG 1 cut(s) 184
CviJI RGCY 8 cut(s) 11, 26, 82, 97, 194, 198, 239, 277
CviKI_1 RGCY 8 cut(s) 11, 26, 82, 97, 194, 198, 239, 277
CviQI GTAC 2 cut(s) 175, 337
DpnI GATC 5 cut(s) 37, 68, 114, 160, 205
DpnII GATC 5 cut(s) 35, 66, 112, 158, 203
EaeI YGGCCR 1 cut(s) 196
EagI CGGCCG 1 cut(s) 196
EclXI CGGCCG 1 cut(s) 196
Eco147I AGGCCT 1 cut(s) 11
Eco24I GRGCYC 1 cut(s) 28
Eco31I GGTCTC 1 cut(s) 322
Eco52I CGGCCG 1 cut(s) 196
Eco88I CYCGRG 2 cut(s) 83, 207
EcoO109I RGGNCCY 1 cut(s) 24
EcoT38I GRGCYC 1 cut(s) 28
FaeI CATG 1 cut(s) 187
FaiI YATR 8 cut(s) 91, 185, 280, 348, 350, 389, 395, 403
FatI CATG 1 cut(s) 183
FauI CCCGC 1 cut(s) 35
FauNDI CATATG 1 cut(s) 348
Fnu4HI GCNGC 2 cut(s) 107, 366
FokI GGATG 2 cut(s) 55, 300
FriOI GRGCYC 1 cut(s) 28
FseI GGCCGGCC 1 cut(s) 198
Fsp4HI GCNGC 2 cut(s) 107, 366
FspBI CTAG 1 cut(s) 234
GluI GCNGC 2 cut(s) 107, 366
HaeIII GGCC 6 cut(s) 11, 26, 97, 194, 198, 239
HapII CCGG 7 cut(s) 39, 56, 149, 162, 195, 199, 358
HgaI GACGC 1 cut(s) 123
Hin1II CATG 1 cut(s) 187
HinfI GANTC 3 cut(s) 226, 270, 374
HpaII CCGG 7 cut(s) 39, 56, 149, 162, 195, 199, 358
Hpy188I TCNGA 2 cut(s) 19, 381
Hpy188III TCNNGA 4 cut(s) 70, 85, 162, 207
HpyAV CCTTC 3 cut(s) 22, 96, 240
HpyCH4III ACNGT 1 cut(s) 254
HpyCH4IV ACGT 1 cut(s) 335
HpyF10VI GCNNNNNNNGC 1 cut(s) 103
HpySE526I ACGT 1 cut(s) 335
Hsp92II CATG 1 cut(s) 187
Kpn2I TCCGGA 1 cut(s) 161
KroI GCCGGC 2 cut(s) 194, 198
KroNI GCCGGC 2 cut(s) 196, 200
Kzo9I GATC 5 cut(s) 35, 66, 112, 158, 203
LmnI GCTCC 1 cut(s) 216
LpnPI CCDG 7 cut(s) 52, 69, 162, 175, 208, 212, 371
LweI GCATC 1 cut(s) 372
MaeI CTAG 1 cut(s) 234
MaeII ACGT 1 cut(s) 335
MalI GATC 5 cut(s) 37, 68, 114, 160, 205
MboI GATC 5 cut(s) 35, 66, 112, 158, 203
MboII GAAGA 1 cut(s) 365
MflI RGATCY 2 cut(s) 112, 158
MhlI GDGCHC 1 cut(s) 28
MlyI GAGTC 2 cut(s) 235, 368
MmeI TCCRAC 1 cut(s) 40
MnlI CCTC 4 cut(s) 136, 138, 216, 307
MroI TCCGGA 1 cut(s) 161
MroNI GCCGGC 2 cut(s) 194, 198
MseI TTAA 1 cut(s) 117
MspCI CTTAAG 1 cut(s) 116
MspI CCGG 7 cut(s) 39, 56, 149, 162, 195, 199, 358
MspR9I CCNGG 2 cut(s) 40, 150
Mva1269I GAATGC 1 cut(s) 368
MwoI GCNNNNNNNGC 1 cut(s) 103
NaeI GCCGGC 2 cut(s) 196, 200
NciI CCSGG 2 cut(s) 40, 150
NdeI CATATG 1 cut(s) 348
NdeII GATC 5 cut(s) 35, 66, 112, 158, 203
NgoMIV GCCGGC 2 cut(s) 194, 198
NlaIII CATG 1 cut(s) 187
NlaIV GGNNCC 2 cut(s) 26, 147
NspI RCATGY 1 cut(s) 187
PaeR7I CTCGAG 1 cut(s) 207
PceI AGGCCT 1 cut(s) 11
PctI GAATGC 1 cut(s) 368
PdiI GCCGGC 2 cut(s) 196, 200
PfeI GAWTC 1 cut(s) 270
Pfl23II CGTACG 1 cut(s) 336
PflMI CCANNNNNTGG 1 cut(s) 59
PfoI TCCNGGA 1 cut(s) 38
PinAI ACCGGT 2 cut(s) 55, 357
PkrI GCNGC 2 cut(s) 108, 367
PleI GAGTC 2 cut(s) 234, 368
PpsI GAGTC 2 cut(s) 234, 368
PsiI TTATAA 1 cut(s) 403
PspLI CGTACG 1 cut(s) 336
PspN4I GGNNCC 2 cut(s) 26, 147
PspOMI GGGCCC 1 cut(s) 24
PspPI GGNCC 4 cut(s) 24, 25, 192, 237
PsuI RGATCY 2 cut(s) 112, 158
RigI GGCCGGCC 1 cut(s) 198
RsaI GTAC 2 cut(s) 176, 338
RsaNI GTAC 2 cut(s) 175, 337
SaqAI TTAA 1 cut(s) 117
SatI GCNGC 2 cut(s) 107, 366
Sau3AI GATC 5 cut(s) 35, 66, 112, 158, 203
Sau96I GGNCC 4 cut(s) 24, 25, 192, 237
SchI GAGTC 2 cut(s) 235, 368
ScrFI CCNGG 2 cut(s) 40, 150
SduI GDGCHC 1 cut(s) 28
SetI ASST 4 cut(s) 147, 173, 279, 338
SfaNI GCATC 1 cut(s) 372
Sfr274I CTCGAG 1 cut(s) 207
SlaI CTCGAG 1 cut(s) 207
SmlI CTYRAG 3 cut(s) 116, 129, 207
SmoI CTYRAG 3 cut(s) 116, 129, 207
SseBI AGGCCT 1 cut(s) 11
SsiI CCGC 4 cut(s) 28, 106, 328, 366
SspMI CTAG 1 cut(s) 234
StuI AGGCCT 1 cut(s) 11
StyD4I CCNGG 2 cut(s) 38, 148
TaaI ACNGT 1 cut(s) 254
TaiI ACGT 1 cut(s) 338
TaqI TCGA 5 cut(s) 34, 208, 268, 273, 372
TaqII GACCGA 1 cut(s) 304
TauI GCSGC 2 cut(s) 109, 368
TfiI GAWTC 1 cut(s) 270
Tru1I TTAA 1 cut(s) 117
Tru9I TTAA 1 cut(s) 117
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 2 cut(s) 112, 127
Van91I CCANNNNNTGG 1 cut(s) 59
Vha464I CTTAAG 1 cut(s) 116
XceI RCATGY 1 cut(s) 187
XhoI CTCGAG 1 cut(s) 207
XspI CTAG 1 cut(s) 234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.