Rmu_sc0005971.1_g000015

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005971.1
OG0000075
Physical Location & Seq
Reverse (-)
32542 .. 34711
2170 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005971.1_g000015.1.cds

Sequence Viewer

Length: 1335 bp
atggatggggaaaccttgtctcgttgccggcctttggcagagataatcattgaggatatggtgctttgggctcctactcagtttcagcccatttgtgagtatcgtaatcgcgtctttatcaacatgcccagcgaagtcgctagtaagagtgacgccctttataccgaggtgaatacatatgccatcaatgaggagttgctaaaagactcggaggtggtaaggagttgcaacgtggatttgctgggtggagaggtttacgagaccgagcatcgggtgaacatgcagttgcctgatggcgtgtacgagacgtttctggataaggttttggagtacctcaatagtcgagcagttgatactgaggtggagatctccgtggaggaattgtttgaggaagttgagcggctggaggacgtggtcttggagcagctggagggtttttttggcatcgataccgagggtccggggtcccgagaggttattgctattgatagcaaggagactaaggtaacaaacaaagttgtggatgccgcagttgtggtgactggggctggcgatgctaagaaaagagctggagaaaatggaggtggtgaggacgtccagatggctgaggtgggttctcggcactcgcataatgagattgttggaggtcttgctcgcacacttggtgagatcgggatcacagatggtgatattttgcatatggtggccgacttgggcaattatcatcgtgattggggccgtgttaactctgaggatcctcgtctcaggtatcgggatgcccaagagaggttgatgagggtatgtggtttctgtttccttctctgtccctttttttttttcatgtgccgtttatgtggcgatgtgcatgctgtgaatatgaattatcaagtgtcggctgagttgctcgagcactttgatcgagggattgctcagctcctaggcgagctggaggctgagagaatgagggctcaagagattcagggtttgttggatggcggcaaggctgaccatgaagaactgaggcaggcgattgacgatggcattgaatggacgatggagctagagcaatcgttggcggccaaggtggggttaaaggccttggaggaggttagggtgcagttgcgcattgttgaagggcgtctacatgagttggagaggcaagtccgagatcaggatgtcgagttgaaacttcatgaggcgacattgcagagtttggccccttacacagattgcattgtcgagttggaggggcagctcagtgttttgcaaagggaggttgatagtttgagggttgttgaacgccaggctggcgaggaggatgtggagttggagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

444

Amino Acids

50.08

Weight (kDa)

4.49

Isoelectric Point (pI)

33.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 597
Acc16I TGCGCA 1 cut(s) 1124
AccBSI CCGCTC 1 cut(s) 400
AccI GTMKAC 1 cut(s) 1141
AccII CGCG 1 cut(s) 111
AciI CCGC 4 cut(s) 400, 528, 996, 1076
AclWI GGATC 3 cut(s) 683, 749, 762
AcoI YGGCCR 2 cut(s) 705, 1077
AcyI GRCGYC 3 cut(s) 153, 594, 1138
AdeI CACNNNGTG 1 cut(s) 665
AfaI GTAC 2 cut(s) 302, 332
AfiI CCNNNNNNNGG 5 cut(s) 34, 270, 786, 1086, 1171
AgsI TTSAA 4 cut(s) 1046, 1133, 1186, 1298
AjiI CACGTC 1 cut(s) 412
AjnI CCWGG 1 cut(s) 1302
AluBI AGCT 6 cut(s) 427, 569, 934, 946, 1060, 1255
AluI AGCT 6 cut(s) 427, 569, 934, 946, 1060, 1255
Alw21I GWGCWC 1 cut(s) 912
Alw26I GTCTC 5 cut(s) 24, 254, 299, 491, 767
AlwI GGATC 3 cut(s) 683, 749, 762
Ama87I CYCGRG 2 cut(s) 468, 905
AoxI GGCC 6 cut(s) 29, 705, 736, 1077, 1095, 1215
ApeKI GCWGC 2 cut(s) 424, 1252
AspA2I CCTAGG 1 cut(s) 937
AspLEI GCGC 1 cut(s) 1125
AspS9I GGNCC 4 cut(s) 458, 465, 736, 1216
AsuC2I CCSGG 1 cut(s) 462
AsuHPI GGTGA 6 cut(s) 181, 286, 550, 599, 677, 698
AvaI CYCGRG 2 cut(s) 468, 905
AvaII GGWCC 2 cut(s) 458, 465
AvrII CCTAGG 1 cut(s) 937
BaeI ACNNNNGTAYC 2 cut(s) 345, 378
BamHI GGATCC 1 cut(s) 754
BanII GRGCYC 2 cut(s) 73, 970
BarI GAAGNNNNNNTAC 2 cut(s) 1125, 1157
Bbv12I GWGCWC 1 cut(s) 912
BbvCI CCTCAGC 1 cut(s) 606
BbvI GCAGC 2 cut(s) 436, 1264
BccI CCATC 7 cut(s) 191, 287, 595, 677, 986, 1031, 1048
BceAI ACGGC 2 cut(s) 723, 831
BcgI CGANNNNNNTGC 4 cut(s) 848, 882, 899, 933
BciT130I CCWGG 1 cut(s) 1304
BcnI CCSGG 1 cut(s) 462
BcoDI GTCTC 5 cut(s) 24, 254, 299, 491, 767
BfaI CTAG 3 cut(s) 141, 938, 1061
BglI GCCNNNNNGGC 1 cut(s) 1308
BglII AGATCT 1 cut(s) 366
BisI GCNGC 6 cut(s) 401, 425, 528, 997, 1077, 1253
BlnI CCTAGG 1 cut(s) 937
BlpI GCTNAGC 1 cut(s) 930
BlsI GCNGC 6 cut(s) 402, 426, 529, 998, 1078, 1254
Bme1390I CCNGG 2 cut(s) 462, 1304
Bme18I GGWCC 2 cut(s) 458, 465
BmeT110I CYCGRG 2 cut(s) 468, 905
BmgBI CACGTC 1 cut(s) 412
BmgT120I GGNCC 4 cut(s) 458, 465, 736, 1216
BmiI GGNNCC 7 cut(s) 72, 459, 466, 467, 737, 756, 1218
BmrFI CCNGG 2 cut(s) 462, 1304
BmrI ACTGGG 1 cut(s) 552
BmsI GCATC 5 cut(s) 277, 453, 514, 544, 766
BmuI ACTGGG 1 cut(s) 552
BpmI CTGGAG 4 cut(s) 425, 449, 591, 968
Bpu10I CCTNAGC 1 cut(s) 606
Bpu1102I GCTNAGC 1 cut(s) 930
BpuEI CTTGAG 1 cut(s) 954
BpuMI CCSGG 1 cut(s) 462
Bsa29I ATCGAT 1 cut(s) 447
BsaBI GATNNNNATC 1 cut(s) 674
BsaHI GRCGYC 3 cut(s) 153, 594, 1138
BsaI GGTCTC 1 cut(s) 254
BsaJI CCNNGG 7 cut(s) 165, 372, 453, 461, 937, 1080, 1098
BsaXI ACNNNNNCTCC 3 cut(s) 368, 398, 1316
Bsc4I CCNNNNNNNGG 5 cut(s) 34, 270, 786, 1086, 1171
Bse118I RCCGGY 1 cut(s) 27
Bse1I ACTGG 1 cut(s) 547
Bse3DI GCAATG 1 cut(s) 1202
Bse8I GATNNNNATC 1 cut(s) 674
BseBI CCWGG 1 cut(s) 1304
BseCI ATCGAT 1 cut(s) 447
BseDI CCNNGG 7 cut(s) 165, 372, 453, 461, 937, 1080, 1098
BseGI GGATG 6 cut(s) 10, 529, 781, 997, 1180, 1324
BseJI GATNNNNATC 1 cut(s) 674
BseLI CCNNNNNNNGG 5 cut(s) 34, 270, 786, 1086, 1171
BseMI GCAATG 1 cut(s) 1202
BseNI ACTGG 1 cut(s) 547
BseRI GAGGAG 3 cut(s) 206, 1118, 1328
BseXI GCAGC 2 cut(s) 436, 1264
BseYI CCCAGC 2 cut(s) 128, 241
BsgI GTGCAG 1 cut(s) 1136
Bsh1236I CGCG 1 cut(s) 111
BshFI GGCC 6 cut(s) 31, 707, 738, 1079, 1097, 1217
BshVI ATCGAT 1 cut(s) 447
BsiHKAI GWGCWC 1 cut(s) 912
BsiHKCI CYCGRG 2 cut(s) 468, 905
BsiSI CCGG 2 cut(s) 28, 461
BslFI GGGAC 2 cut(s) 451, 810
BslI CCNNNNNNNGG 5 cut(s) 34, 270, 786, 1086, 1171
BsmAI GTCTC 5 cut(s) 24, 254, 299, 491, 767
BsmBI CGTCTC 2 cut(s) 299, 767
BsmFI GGGAC 2 cut(s) 451, 810
BsnI GGCC 6 cut(s) 31, 707, 738, 1079, 1097, 1217
Bso31I GGTCTC 1 cut(s) 254
BsoBI CYCGRG 2 cut(s) 468, 905
Bsp1286I GDGCHC 3 cut(s) 73, 912, 970
Bsp143I GATC 6 cut(s) 366, 669, 675, 754, 916, 1168
Bsp1720I GCTNAGC 1 cut(s) 930
BspACI CCGC 4 cut(s) 400, 528, 996, 1076
BspANI GGCC 6 cut(s) 31, 707, 738, 1079, 1097, 1217
BspDI ATCGAT 1 cut(s) 447
BspFNI CGCG 1 cut(s) 111
BspHI TCATGA 1 cut(s) 1192
BspLI GGNNCC 7 cut(s) 72, 459, 466, 467, 737, 756, 1218
BspPI GGATC 3 cut(s) 683, 749, 762
BspTNI GGTCTC 1 cut(s) 254
BsrBI CCGCTC 1 cut(s) 400
BsrDI GCAATG 1 cut(s) 1202
BsrFI RCCGGY 1 cut(s) 27
BsrI ACTGG 1 cut(s) 547
BssAI RCCGGY 1 cut(s) 27
BssECI CCNNGG 7 cut(s) 165, 372, 453, 461, 937, 1080, 1098
BssMI GATC 6 cut(s) 366, 669, 675, 754, 916, 1168
BssNI GRCGYC 3 cut(s) 153, 594, 1138
BssT1I CCWWGG 3 cut(s) 937, 1080, 1098
Bst2UI CCWGG 1 cut(s) 1304
BstACI GRCGYC 3 cut(s) 153, 594, 1138
BstC8I GCNNGC 7 cut(s) 29, 550, 655, 867, 944, 1026, 1309
BstDSI CCRYGG 1 cut(s) 372
BstF5I GGATG 6 cut(s) 10, 529, 781, 997, 1180, 1324
BstFNI CGCG 1 cut(s) 111
BstHHI GCGC 1 cut(s) 1125
BstKTI GATC 6 cut(s) 369, 672, 678, 757, 919, 1171
BstMAI GTCTC 5 cut(s) 24, 254, 299, 491, 767
BstMBI GATC 6 cut(s) 366, 669, 675, 754, 916, 1168
BstMWI GCNNNNNNNGC 2 cut(s) 554, 1308
BstNI CCWGG 1 cut(s) 1304
BstNSI RCATGY 3 cut(s) 127, 283, 869
BstSCI CCNGG 2 cut(s) 460, 1302
BstUI CGCG 1 cut(s) 111
BstV1I GCAGC 2 cut(s) 436, 1264
BstX2I RGATCY 2 cut(s) 366, 754
BstYI RGATCY 2 cut(s) 366, 754
Bsu15I ATCGAT 1 cut(s) 447
BsuRI GGCC 6 cut(s) 31, 707, 738, 1079, 1097, 1217
BsuTUI ATCGAT 1 cut(s) 447
BtgI CCRYGG 1 cut(s) 372
BtgZI GCGATG 2 cut(s) 567, 873
BtrI CACGTC 1 cut(s) 412
BtsCI GGATG 6 cut(s) 10, 529, 781, 997, 1180, 1324
BtsIMutI CAGTG 1 cut(s) 1264
Cac8I GCNNGC 7 cut(s) 29, 550, 655, 867, 944, 1026, 1309
CciI TCATGA 1 cut(s) 1192
CfoI GCGC 1 cut(s) 1125
Cfr10I RCCGGY 1 cut(s) 27
Cfr13I GGNCC 4 cut(s) 458, 465, 736, 1216
ClaI ATCGAT 1 cut(s) 447
CseI GACGC 3 cut(s) 100, 161, 1127
Csp6I GTAC 2 cut(s) 301, 331
CviAII CATG 7 cut(s) 124, 280, 841, 866, 1010, 1145, 1193
CviQI GTAC 2 cut(s) 301, 331
DpnI GATC 6 cut(s) 368, 671, 677, 756, 918, 1170
DpnII GATC 6 cut(s) 366, 669, 675, 754, 916, 1168
DraIII CACNNNGTG 1 cut(s) 665
EaeI YGGCCR 2 cut(s) 705, 1077
Eco130I CCWWGG 3 cut(s) 937, 1080, 1098
Eco147I AGGCCT 1 cut(s) 1097
Eco24I GRGCYC 2 cut(s) 73, 970
Eco31I GGTCTC 1 cut(s) 254
Eco47I GGWCC 2 cut(s) 458, 465
Eco88I CYCGRG 2 cut(s) 468, 905
EcoO109I RGGNCCY 1 cut(s) 465
EcoRII CCWGG 1 cut(s) 1302
EcoT14I CCWWGG 3 cut(s) 937, 1080, 1098
EcoT38I GRGCYC 2 cut(s) 73, 970
ErhI CCWWGG 3 cut(s) 937, 1080, 1098
Esp3I CGTCTC 2 cut(s) 299, 767
FaeI CATG 7 cut(s) 127, 283, 844, 869, 1013, 1148, 1196
FaqI GGGAC 2 cut(s) 451, 810
FatI CATG 7 cut(s) 123, 279, 840, 865, 1009, 1144, 1192
FauNDI CATATG 2 cut(s) 178, 699
FblI GTMKAC 1 cut(s) 1141
Fnu4HI GCNGC 6 cut(s) 401, 425, 528, 997, 1077, 1253
FokI GGATG 6 cut(s) 17, 536, 788, 1004, 1187, 1331
FriOI GRGCYC 2 cut(s) 73, 970
Fsp4HI GCNGC 6 cut(s) 401, 425, 528, 997, 1077, 1253
FspBI CTAG 3 cut(s) 141, 938, 1061
FspI TGCGCA 1 cut(s) 1124
GlaI GCGC 1 cut(s) 1124
GluI GCNGC 6 cut(s) 401, 425, 528, 997, 1077, 1253
GsaI CCCAGC 2 cut(s) 132, 245
GsuI CTGGAG 4 cut(s) 425, 449, 591, 968
HaeIII GGCC 6 cut(s) 31, 707, 738, 1079, 1097, 1217
HapII CCGG 2 cut(s) 28, 461
HgaI GACGC 3 cut(s) 100, 161, 1127
HhaI GCGC 1 cut(s) 1125
Hin1I GRCGYC 3 cut(s) 153, 594, 1138
Hin1II CATG 7 cut(s) 127, 283, 844, 869, 1013, 1148, 1196
Hin6I GCGC 1 cut(s) 1123
HinP1I GCGC 1 cut(s) 1123
HincII GTYRAC 1 cut(s) 745
HindII GTYRAC 1 cut(s) 745
HinfI GANTC 2 cut(s) 206, 976
HpaI GTTAAC 1 cut(s) 745
HpaII CCGG 2 cut(s) 28, 461
HphI GGTGA 6 cut(s) 181, 286, 550, 599, 677, 698
Hpy166II GTNNAC 5 cut(s) 256, 277, 301, 745, 1142
Hpy188I TCNGA 3 cut(s) 211, 751, 1166
Hpy188III TCNNGA 9 cut(s) 314, 468, 598, 673, 728, 773, 971, 1172, 1193
Hpy8I GTNNAC 5 cut(s) 256, 277, 301, 745, 1142
HpyAV CCTTC 2 cut(s) 827, 1127
HpyCH4IV ACGT 4 cut(s) 231, 308, 411, 594
HpyCH4V TGCA 8 cut(s) 228, 283, 697, 865, 1117, 1207, 1233, 1267
HpyF10VI GCNNNNNNNGC 2 cut(s) 554, 1308
HpySE526I ACGT 4 cut(s) 231, 308, 411, 594
Hsp92I GRCGYC 3 cut(s) 153, 594, 1138
Hsp92II CATG 7 cut(s) 127, 283, 844, 869, 1013, 1148, 1196
HspAI GCGC 1 cut(s) 1123
KflI GGGWCCC 1 cut(s) 465
KroI GCCGGC 1 cut(s) 27
KroNI GCCGGC 1 cut(s) 29
KspAI GTTAAC 1 cut(s) 745
Kzo9I GATC 6 cut(s) 366, 669, 675, 754, 916, 1168
LmnI GCTCC 4 cut(s) 76, 421, 939, 1057
Lsp1109I GCAGC 2 cut(s) 436, 1264
LweI GCATC 5 cut(s) 277, 453, 514, 544, 766
MaeI CTAG 3 cut(s) 141, 938, 1061
MaeII ACGT 4 cut(s) 231, 308, 411, 594
MaeIII GTNAC 3 cut(s) 149, 505, 538
MalI GATC 6 cut(s) 368, 671, 677, 756, 918, 1170
MbiI CCGCTC 1 cut(s) 400
MboI GATC 6 cut(s) 366, 669, 675, 754, 916, 1168
MboII GAAGA 1 cut(s) 1025
MflI RGATCY 2 cut(s) 366, 754
MhlI GDGCHC 3 cut(s) 73, 912, 970
MluCI AATT 3 cut(s) 380, 718, 880
MlyI GAGTC 1 cut(s) 200
MmeI TCCRAC 5 cut(s) 622, 969, 1131, 1224, 1308
MroNI GCCGGC 1 cut(s) 27
MseI TTAA 2 cut(s) 744, 1091
MspA1I CMGCKG 1 cut(s) 427
MspI CCGG 2 cut(s) 28, 461
MspR9I CCNGG 2 cut(s) 462, 1304
MvaI CCWGG 1 cut(s) 1304
MvnI CGCG 1 cut(s) 111
MwoI GCNNNNNNNGC 2 cut(s) 554, 1308
NaeI GCCGGC 1 cut(s) 29
NciI CCSGG 1 cut(s) 462
NdeI CATATG 2 cut(s) 178, 699
NdeII GATC 6 cut(s) 366, 669, 675, 754, 916, 1168
NgoMIV GCCGGC 1 cut(s) 27
NlaIII CATG 7 cut(s) 127, 283, 844, 869, 1013, 1148, 1196
NlaIV GGNNCC 7 cut(s) 72, 459, 466, 467, 737, 756, 1218
NmeAIII GCCGAG 1 cut(s) 598
NmuCI GTSAC 2 cut(s) 149, 538
NsbI TGCGCA 1 cut(s) 1124
NspI RCATGY 3 cut(s) 127, 283, 869
PaeI GCATGC 1 cut(s) 869
PaeR7I CTCGAG 1 cut(s) 905
PagI TCATGA 1 cut(s) 1192
PceI AGGCCT 1 cut(s) 1097
PdiI GCCGGC 1 cut(s) 29
PfeI GAWTC 1 cut(s) 976
PflFI GACNNNGTC 1 cut(s) 413
PkrI GCNGC 6 cut(s) 402, 426, 529, 998, 1078, 1254
PleI GAGTC 1 cut(s) 200
PpsI GAGTC 1 cut(s) 200
PpuMI RGGWCCY 1 cut(s) 465
Psp5II RGGWCCY 1 cut(s) 465
Psp6I CCWGG 1 cut(s) 1302
PspFI CCCAGC 2 cut(s) 128, 241
PspGI CCWGG 1 cut(s) 1302
PspN4I GGNNCC 7 cut(s) 72, 459, 466, 467, 737, 756, 1218
PspPI GGNCC 4 cut(s) 458, 465, 736, 1216
PspPPI RGGWCCY 1 cut(s) 465
PspXI VCTCGAGB 1 cut(s) 905
PsuI RGATCY 2 cut(s) 366, 754
PsyI GACNNNGTC 1 cut(s) 413
PvuII CAGCTG 1 cut(s) 427
RsaI GTAC 2 cut(s) 302, 332
RsaNI GTAC 2 cut(s) 301, 331
SaqAI TTAA 2 cut(s) 744, 1091
SatI GCNGC 6 cut(s) 401, 425, 528, 997, 1077, 1253
Sau3AI GATC 6 cut(s) 366, 669, 675, 754, 916, 1168
Sau96I GGNCC 4 cut(s) 458, 465, 736, 1216
SchI GAGTC 1 cut(s) 200
ScrFI CCNGG 2 cut(s) 462, 1304
SduI GDGCHC 3 cut(s) 73, 912, 970
SfaNI GCATC 5 cut(s) 277, 453, 514, 544, 766
Sfr274I CTCGAG 1 cut(s) 905
SinI GGWCC 2 cut(s) 458, 465
SlaI CTCGAG 1 cut(s) 905
SmlI CTYRAG 2 cut(s) 905, 969
SmoI CTYRAG 2 cut(s) 905, 969
SphI GCATGC 1 cut(s) 869
Sse9I AATT 3 cut(s) 380, 718, 880
SseBI AGGCCT 1 cut(s) 1097
SsiI CCGC 4 cut(s) 400, 528, 996, 1076
SspMI CTAG 3 cut(s) 141, 938, 1061
StuI AGGCCT 1 cut(s) 1097
StyD4I CCNGG 2 cut(s) 460, 1302
StyI CCWWGG 3 cut(s) 937, 1080, 1098
TaiI ACGT 4 cut(s) 234, 311, 414, 597
TaqI TCGA 6 cut(s) 343, 447, 906, 919, 1179, 1239
TaqII GACCGA 1 cut(s) 278
TasI AATT 3 cut(s) 380, 718, 880
TauI GCSGC 4 cut(s) 403, 530, 999, 1079
TfiI GAWTC 1 cut(s) 976
Tru1I TTAA 2 cut(s) 744, 1091
Tru9I TTAA 2 cut(s) 744, 1091
TscAI CASTG 1 cut(s) 1264
TseFI GTSAC 2 cut(s) 149, 538
TseI GCWGC 2 cut(s) 424, 1252
Tsp45I GTSAC 2 cut(s) 149, 538
TspDTI ATGAA 4 cut(s) 829, 893, 1026, 1181
TspGWI ACGGA 1 cut(s) 361
TspRI CASTG 1 cut(s) 1264
Tth111I GACNNNGTC 1 cut(s) 413
VpaK11BI GGWCC 2 cut(s) 458, 465
XceI RCATGY 3 cut(s) 127, 283, 869
XhoI CTCGAG 1 cut(s) 905
XmaJI CCTAGG 1 cut(s) 937
XmiI GTMKAC 1 cut(s) 1141
XspI CTAG 3 cut(s) 141, 938, 1061
ZraI GACGTC 1 cut(s) 595
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.