Rroxscaffold_5G00387650

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000075
Physical Location & Seq
Reverse (-)
66244413 .. 66246013
1601 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00387650.1

Sequence Viewer

Length: 825 bp
ATGGAGCGTGAGAACCGTAGTCATGGTAGGCGAGAGGGTACATCTCGTGGAGGGGAAGAGACCTCTCATGGTGGTGTCGGTGCGTCTCGCGAGAGGGGAGAAGGGGTTGCACGCGTCGTGGAGGAGGTGGTTCCCGAGGAGGCTGGTGAAGGGTCGTCTCGAGGAGTTCCGCGTAGGGTTGAGCAAATCACGATGGGCGATGTGCACGAAGCGGAGGGTGTTGAAGTATTGGAAATATCACATTCGCCACGGGGCGATTGCTCCTTGGCTCTACGCCCATTAATCAACCTGGTCCGATGGATATGTCGAACGAGGCCCCTAGCAAAAGTGACGCCCGTATGCGATGTCGATCTCGATACCATTATTCGGGGATTGTTGCGGGAGTCGCAAACGGCGAGGCAAGTGGATGTTGACCTGCAGGATAAGGTGTGTGTGATCGATCACCGGGTTAGCATGTCGCTGCCCAATGAGATGTATCCGAGGTTTCTCGATGCCGTGCGGAGTATTTCAATCAGCCGGCGAGAGAGAAGAAGGCGGTGTCGAGGGCAAGAAGGTCGCGTTGCTCGGGAGCAAACTCGAGATGTCCAGAGCCGCCCACGCAAGCCGGTGACGCGAGTGAGTGCCCCCAAGTGCTTGGTGGCGAGCGTCGGTCCCCGAGACTCGGGAGGTGACAAGGTAGTCCCCCCGGGTCTGGCGGGAGGGGAGGGTCTTGGTGATGTGGCTCATGTCTCGGACCCCCACGGTGGAGGTGGAGATCTCCGTCGAGGATTTCCTTTGGAGGGGGTGGAGCAGCGTCGAGCAATACCGGCGCTCATTCTCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

274

Amino Acids

29.95

Weight (kDa)

8.88

Isoelectric Point (pI)

58.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 677
Acc36I ACCTGC 1 cut(s) 423
AccII CGCG 5 cut(s) 90, 114, 172, 558, 613
AciI CCGC 7 cut(s) 170, 212, 379, 499, 535, 592, 695
AcyI GRCGYC 1 cut(s) 332
AfaI GTAC 1 cut(s) 40
AfiI CCNNNNNNNGG 5 cut(s) 366, 661, 691, 743, 779
AflIII ACRYGT 1 cut(s) 112
AgsI TTSAA 2 cut(s) 224, 510
AjnI CCWGG 1 cut(s) 288
Alw21I GWGCWC 1 cut(s) 207
Alw26I GTCTC 5 cut(s) 53, 90, 162, 651, 733
Alw44I GTGCAC 1 cut(s) 203
Ama87I CYCGRG 7 cut(s) 134, 159, 564, 576, 654, 661, 685
AoxI GGCC 1 cut(s) 314
ApaLI GTGCAC 1 cut(s) 203
ApeKI GCWGC 2 cut(s) 460, 790
AseI ATTAAT 1 cut(s) 281
AspLEI GCGC 1 cut(s) 811
AspS9I GGNCC 4 cut(s) 292, 315, 650, 733
AsuC2I CCSGG 3 cut(s) 446, 686, 687
AsuHPI GGTGA 5 cut(s) 158, 434, 619, 680, 725
AvaI CYCGRG 7 cut(s) 134, 159, 564, 576, 654, 661, 685
AvaII GGWCC 3 cut(s) 292, 650, 733
BaeGI GKGCMC 2 cut(s) 207, 625
BauI CACGAG 1 cut(s) 45
Bbv12I GWGCWC 1 cut(s) 207
BbvI GCAGC 2 cut(s) 447, 802
BccI CCATC 2 cut(s) 187, 291
BceAI ACGGC 2 cut(s) 408, 479
BcgI CGANNNNNNTGC 2 cut(s) 536, 570
BciT130I CCWGG 1 cut(s) 290
BciVI GTATCC 1 cut(s) 486
BcnI CCSGG 3 cut(s) 446, 686, 687
BcoDI GTCTC 5 cut(s) 53, 90, 162, 651, 733
BfaI CTAG 1 cut(s) 320
BfmI CTRYAG 1 cut(s) 416
BfoI RGCGCY 1 cut(s) 812
BfuAI ACCTGC 1 cut(s) 423
BfuI GTATCC 1 cut(s) 486
BglII AGATCT 1 cut(s) 754
BisI GCNGC 3 cut(s) 461, 592, 791
BlsI GCNGC 3 cut(s) 462, 593, 792
Bme1390I CCNGG 4 cut(s) 290, 446, 686, 687
Bme18I GGWCC 3 cut(s) 292, 650, 733
BmeT110I CYCGRG 7 cut(s) 134, 159, 564, 576, 654, 661, 685
BmgT120I GGNCC 4 cut(s) 292, 315, 650, 733
BmiI GGNNCC 4 cut(s) 132, 317, 652, 735
BmrFI CCNGG 4 cut(s) 290, 446, 686, 687
BmsI GCATC 1 cut(s) 481
BpuMI CCSGG 3 cut(s) 446, 686, 687
Bsa29I ATCGAT 1 cut(s) 438
BsaBI GATNNNNATC 1 cut(s) 348
BsaHI GRCGYC 1 cut(s) 332
BsaI GGTCTC 1 cut(s) 53
BsaJI CCNNGG 7 cut(s) 135, 248, 264, 479, 684, 685, 739
BsaXI ACNNNNNCTCC 2 cut(s) 90, 120
Bsc4I CCNNNNNNNGG 5 cut(s) 366, 661, 691, 743, 779
Bse118I RCCGGY 3 cut(s) 516, 604, 805
Bse8I GATNNNNATC 1 cut(s) 348
BseBI CCWGG 1 cut(s) 290
BseCI ATCGAT 1 cut(s) 438
BseDI CCNNGG 7 cut(s) 135, 248, 264, 479, 684, 685, 739
BseGI GGATG 1 cut(s) 412
BseJI GATNNNNATC 1 cut(s) 348
BseLI CCNNNNNNNGG 5 cut(s) 366, 661, 691, 743, 779
BseRI GAGGAG 3 cut(s) 137, 152, 177
BseSI GKGCMC 2 cut(s) 207, 625
BseXI GCAGC 2 cut(s) 447, 802
Bsh1236I CGCG 5 cut(s) 90, 114, 172, 558, 613
BshFI GGCC 1 cut(s) 316
BshVI ATCGAT 1 cut(s) 438
BsiHKAI GWGCWC 1 cut(s) 207
BsiHKCI CYCGRG 7 cut(s) 134, 159, 564, 576, 654, 661, 685
BsiSI CCGG 5 cut(s) 445, 517, 605, 686, 806
BslFI GGGAC 2 cut(s) 636, 665
BslI CCNNNNNNNGG 5 cut(s) 366, 661, 691, 743, 779
BsmAI GTCTC 5 cut(s) 53, 90, 162, 651, 733
BsmBI CGTCTC 2 cut(s) 90, 162
BsmFI GGGAC 2 cut(s) 636, 665
BsnI GGCC 1 cut(s) 316
Bso31I GGTCTC 1 cut(s) 53
BsoBI CYCGRG 7 cut(s) 134, 159, 564, 576, 654, 661, 685
Bsp1286I GDGCHC 2 cut(s) 207, 625
Bsp143I GATC 4 cut(s) 349, 435, 439, 754
Bsp68I TCGCGA 1 cut(s) 90
BspACI CCGC 7 cut(s) 170, 212, 379, 499, 535, 592, 695
BspANI GGCC 1 cut(s) 316
BspDI ATCGAT 1 cut(s) 438
BspFNI CGCG 5 cut(s) 90, 114, 172, 558, 613
BspLI GGNNCC 4 cut(s) 132, 317, 652, 735
BspMAI CTGCAG 1 cut(s) 420
BspMI ACCTGC 1 cut(s) 423
BspTNI GGTCTC 1 cut(s) 53
BsrFI RCCGGY 3 cut(s) 516, 604, 805
BssAI RCCGGY 3 cut(s) 516, 604, 805
BssECI CCNNGG 7 cut(s) 135, 248, 264, 479, 684, 685, 739
BssMI GATC 4 cut(s) 349, 435, 439, 754
BssNI GRCGYC 1 cut(s) 332
BssSI CACGAG 1 cut(s) 45
BssT1I CCWWGG 1 cut(s) 264
Bst2BI CACGAG 1 cut(s) 45
Bst2UI CCWGG 1 cut(s) 290
Bst4CI ACNGT 2 cut(s) 17, 743
Bst6I CTCTTC 1 cut(s) 51
BstACI GRCGYC 1 cut(s) 332
BstC8I GCNNGC 4 cut(s) 112, 518, 602, 643
BstDEI CTNAG 1 cut(s) 822
BstDSI CCRYGG 2 cut(s) 248, 739
BstF5I GGATG 1 cut(s) 412
BstFNI CGCG 5 cut(s) 90, 114, 172, 558, 613
BstH2I RGCGCY 1 cut(s) 812
BstHHI GCGC 1 cut(s) 811
BstKTI GATC 4 cut(s) 352, 438, 442, 757
BstMAI GTCTC 5 cut(s) 53, 90, 162, 651, 733
BstMBI GATC 4 cut(s) 349, 435, 439, 754
BstMWI GCNNNNNNNGC 4 cut(s) 385, 597, 610, 806
BstNI CCWGG 1 cut(s) 290
BstNSI RCATGY 1 cut(s) 457
BstSCI CCNGG 4 cut(s) 288, 444, 684, 685
BstSFI CTRYAG 1 cut(s) 416
BstSLI GKGCMC 2 cut(s) 207, 625
BstUI CGCG 5 cut(s) 90, 114, 172, 558, 613
BstV1I GCAGC 2 cut(s) 447, 802
BstX2I RGATCY 1 cut(s) 754
BstXI CCANNNNNNTGG 1 cut(s) 634
BstYI RGATCY 1 cut(s) 754
Bsu15I ATCGAT 1 cut(s) 438
BsuI GTATCC 1 cut(s) 486
BsuRI GGCC 1 cut(s) 316
BsuTUI ATCGAT 1 cut(s) 438
BtgI CCRYGG 2 cut(s) 248, 739
BtgZI GCGATG 2 cut(s) 213, 357
BtsCI GGATG 1 cut(s) 412
BtuMI TCGCGA 1 cut(s) 90
BveI ACCTGC 1 cut(s) 423
Cac8I GCNNGC 4 cut(s) 112, 518, 602, 643
CfoI GCGC 1 cut(s) 811
Cfr10I RCCGGY 3 cut(s) 516, 604, 805
Cfr13I GGNCC 4 cut(s) 292, 315, 650, 733
Cfr9I CCCGGG 1 cut(s) 685
ClaI ATCGAT 1 cut(s) 438
CseI GACGC 6 cut(s) 72, 103, 340, 619, 634, 782
CsiI ACCWGGT 1 cut(s) 288
Csp6I GTAC 1 cut(s) 39
CviAII CATG 4 cut(s) 23, 68, 454, 725
CviJI RGCY 7 cut(s) 143, 269, 316, 516, 591, 604, 722
CviKI_1 RGCY 7 cut(s) 143, 269, 316, 516, 591, 604, 722
CviQI GTAC 1 cut(s) 39
DdeI CTNAG 1 cut(s) 822
DpnI GATC 4 cut(s) 351, 437, 441, 756
DpnII GATC 4 cut(s) 349, 435, 439, 754
DrdI GACNNNNNNGTC 1 cut(s) 677
DseDI GACNNNNNNGTC 1 cut(s) 677
Eam1104I CTCTTC 1 cut(s) 51
EarI CTCTTC 1 cut(s) 51
Eco130I CCWWGG 1 cut(s) 264
Eco31I GGTCTC 1 cut(s) 53
Eco47I GGWCC 3 cut(s) 292, 650, 733
Eco88I CYCGRG 7 cut(s) 134, 159, 564, 576, 654, 661, 685
EcoO109I RGGNCCY 1 cut(s) 315
EcoRII CCWGG 1 cut(s) 288
EcoT14I CCWWGG 1 cut(s) 264
ErhI CCWWGG 1 cut(s) 264
Esp3I CGTCTC 2 cut(s) 90, 162
FaeI CATG 4 cut(s) 26, 71, 457, 728
FaiI YATR 6 cut(s) 24, 69, 304, 340, 455, 726
FaqI GGGAC 2 cut(s) 636, 665
FatI CATG 4 cut(s) 22, 67, 453, 724
FauI CCCGC 2 cut(s) 372, 688
Fnu4HI GCNGC 3 cut(s) 461, 592, 791
FokI GGATG 1 cut(s) 419
Fsp4HI GCNGC 3 cut(s) 461, 592, 791
FspBI CTAG 1 cut(s) 320
GlaI GCGC 1 cut(s) 810
GluI GCNGC 3 cut(s) 461, 592, 791
HaeII RGCGCY 1 cut(s) 812
HaeIII GGCC 1 cut(s) 316
HapII CCGG 5 cut(s) 445, 517, 605, 686, 806
HgaI GACGC 6 cut(s) 72, 103, 340, 619, 634, 782
HhaI GCGC 1 cut(s) 811
Hin1I GRCGYC 1 cut(s) 332
Hin1II CATG 4 cut(s) 26, 71, 457, 728
Hin6I GCGC 1 cut(s) 809
HinP1I GCGC 1 cut(s) 809
HincII GTYRAC 1 cut(s) 412
HindII GTYRAC 1 cut(s) 412
HinfI GANTC 2 cut(s) 383, 659
HpaII CCGG 5 cut(s) 445, 517, 605, 686, 806
HphI GGTGA 5 cut(s) 158, 434, 619, 680, 725
Hpy166II GTNNAC 2 cut(s) 205, 412
Hpy188I TCNGA 3 cut(s) 296, 480, 733
Hpy8I GTNNAC 2 cut(s) 205, 412
Hpy99I CGWCG 4 cut(s) 119, 650, 765, 798
HpyAV CCTTC 4 cut(s) 95, 143, 525, 545
HpyCH4III ACNGT 2 cut(s) 17, 743
HpyCH4V TGCA 3 cut(s) 110, 205, 418
HpyF10VI GCNNNNNNNGC 4 cut(s) 385, 597, 610, 806
HpyF3I CTNAG 1 cut(s) 822
Hsp92I GRCGYC 1 cut(s) 332
Hsp92II CATG 4 cut(s) 26, 71, 457, 728
HspAI GCGC 1 cut(s) 809
KroI GCCGGC 1 cut(s) 516
KroNI GCCGGC 1 cut(s) 518
Kzo9I GATC 4 cut(s) 349, 435, 439, 754
LmnI GCTCC 4 cut(s) 4, 266, 568, 787
Lsp1109I GCAGC 2 cut(s) 447, 802
LweI GCATC 1 cut(s) 481
MabI ACCWGGT 1 cut(s) 288
MaeI CTAG 1 cut(s) 320
MaeIII GTNAC 3 cut(s) 328, 607, 668
MalI GATC 4 cut(s) 351, 437, 441, 756
MboI GATC 4 cut(s) 349, 435, 439, 754
MboII GAAGA 2 cut(s) 68, 540
MflI RGATCY 1 cut(s) 754
MhlI GDGCHC 2 cut(s) 207, 625
MluI ACGCGT 1 cut(s) 112
MlyI GAGTC 2 cut(s) 392, 653
MroNI GCCGGC 1 cut(s) 516
MseI TTAA 1 cut(s) 281
MslI CAYNNNNRTG 1 cut(s) 72
MspI CCGG 5 cut(s) 445, 517, 605, 686, 806
MspR9I CCNGG 4 cut(s) 290, 446, 686, 687
MvaI CCWGG 1 cut(s) 290
MvnI CGCG 5 cut(s) 90, 114, 172, 558, 613
MwoI GCNNNNNNNGC 4 cut(s) 385, 597, 610, 806
NaeI GCCGGC 1 cut(s) 518
NciI CCSGG 3 cut(s) 446, 686, 687
NdeII GATC 4 cut(s) 349, 435, 439, 754
NgoMIV GCCGGC 1 cut(s) 516
NlaIII CATG 4 cut(s) 26, 71, 457, 728
NlaIV GGNNCC 4 cut(s) 132, 317, 652, 735
NmuCI GTSAC 3 cut(s) 328, 607, 668
NruI TCGCGA 1 cut(s) 90
NspI RCATGY 1 cut(s) 457
PaeR7I CTCGAG 2 cut(s) 159, 576
PcsI WCGNNNNNNNCGW 1 cut(s) 392
PdiI GCCGGC 1 cut(s) 518
PkrI GCNGC 3 cut(s) 462, 593, 792
PleI GAGTC 2 cut(s) 391, 653
PpsI GAGTC 2 cut(s) 391, 653
PshBI ATTAAT 1 cut(s) 281
Psp6I CCWGG 1 cut(s) 288
PspGI CCWGG 1 cut(s) 288
PspN4I GGNNCC 4 cut(s) 132, 317, 652, 735
PspPI GGNCC 4 cut(s) 292, 315, 650, 733
PstI CTGCAG 1 cut(s) 420
PsuI RGATCY 1 cut(s) 754
RruI TCGCGA 1 cut(s) 90
RsaI GTAC 1 cut(s) 40
RsaNI GTAC 1 cut(s) 39
RseI CAYNNNNRTG 1 cut(s) 72
SaqAI TTAA 1 cut(s) 281
SatI GCNGC 3 cut(s) 461, 592, 791
Sau3AI GATC 4 cut(s) 349, 435, 439, 754
Sau96I GGNCC 4 cut(s) 292, 315, 650, 733
SbfI CCTGCAGG 1 cut(s) 420
SchI GAGTC 2 cut(s) 392, 653
ScrFI CCNGG 4 cut(s) 290, 446, 686, 687
SdaI CCTGCAGG 1 cut(s) 420
SduI GDGCHC 2 cut(s) 207, 625
SexAI ACCWGGT 1 cut(s) 288
SfaNI GCATC 1 cut(s) 481
SfcI CTRYAG 1 cut(s) 416
Sfr274I CTCGAG 2 cut(s) 159, 576
SinI GGWCC 3 cut(s) 292, 650, 733
SlaI CTCGAG 2 cut(s) 159, 576
SmaI CCCGGG 1 cut(s) 687
SmiMI CAYNNNNRTG 1 cut(s) 72
SmlI CTYRAG 2 cut(s) 159, 576
SmoI CTYRAG 2 cut(s) 159, 576
Sse8387I CCTGCAGG 1 cut(s) 420
SsiI CCGC 7 cut(s) 170, 212, 379, 499, 535, 592, 695
SspMI CTAG 1 cut(s) 320
StyD4I CCNGG 4 cut(s) 288, 444, 684, 685
StyI CCWWGG 1 cut(s) 264
TaaI ACNGT 2 cut(s) 17, 743
TaqII GACCGA 1 cut(s) 638
TauI GCSGC 1 cut(s) 594
Tru1I TTAA 1 cut(s) 281
Tru9I TTAA 1 cut(s) 281
TseFI GTSAC 3 cut(s) 328, 607, 668
TseI GCWGC 2 cut(s) 460, 790
Tsp45I GTSAC 3 cut(s) 328, 607, 668
TspGWI ACGGA 1 cut(s) 749
TspMI CCCGGG 1 cut(s) 685
VneI GTGCAC 1 cut(s) 203
VpaK11BI GGWCC 3 cut(s) 292, 650, 733
VspI ATTAAT 1 cut(s) 281
XceI RCATGY 1 cut(s) 457
XcmI CCANNNNNNNNNTGG 2 cut(s) 634, 746
XhoI CTCGAG 2 cut(s) 159, 576
XmaI CCCGGG 1 cut(s) 685
XspI CTAG 1 cut(s) 320
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.