Rmu_sc0004099.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004099.1
OG0000075
Physical Location & Seq
Forward (+)
10885 .. 13906
3022 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004099.1_g000003.1.cds

Sequence Viewer

Length: 1242 bp
atgttcaagatgcagtactcgatgaaagctggtgataacggatgtgtaaattttagggcgcgcagcagcactattattgaggacctgccgtcaaacatttatgctcgctggcggggaaggccatgcttggtaggagtgaggcatgaggttgatttgaccacgttggagcagaggcgtgtggcgagggcgatgggtgcatttcccaagggggcgagggggttctatcgcttgtgcaggctcccgatttacgagaggtttagtttagggaggcgtctgggtgagggtaagagcgacgcccagtacgccgatgtcaattccgttaccattattgaggggttgttgcgagaatcggagacagcgaggtgggttgatgttgatctgctagataatgtgctcgtaactgatcatcgggtgggtgaagtgggcgaccgccctcaagttcatgttggtgggcaccaatcccccgagactcgagaggtggagagacagtcccccctggtctcggcaggaggggtggatcttggtgacgtggctcgggtctcggaaccgacggttaaagtggagatctccgttgaggagttactggaagaggtggagtggcgtcaaagcgataccagcgcccgtgctcttttggtgcaagacgcagttttggaacaactagatgctgtctttggcaaggacgttggtgctccggtctcgcgggaggtcatcattgttgatagtggggaggcggaggtgaccagccaggccgtgggcgagacaagtctggttgtcgaagatcctgaggtgcaacccgagtctgtagaggacgtggttggggtcgaagaaaaggaatgccttgcagttacgtctcgtagtcccccagttggtgttggcatcgatactcgtggtagcaagaggtctcgggttgataatgtgtcgcgctcgagatctacaagtgggggcaagtctgtaaatatgaattaccatgcctctggagagttggtagctcaatttgatcgggagatagcccggctgcagggggagctgaatgccaagagcgagcgggcgtttaagcttcagagtgtagtggaccgaggccaggtggaatacgaggatatgaggcgagtaattgatgaagggatcgcgaggaggatggagctggagcgatcatttgccatggaggaggctcgttgccaagaggacgagggtgtcatcgctccactgagggaggccaacttggatctgaccaggaggctgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

413

Amino Acids

45.81

Weight (kDa)

5.01

Isoelectric Point (pI)

53.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1190
Acc36I ACCTGC 1 cut(s) 93
AccB1I GGYRCC 1 cut(s) 453
AccB7I CCANNNNNTGG 1 cut(s) 751
AccBSI CCGCTC 1 cut(s) 1045
AccII CGCG 4 cut(s) 61, 700, 922, 1127
AciI CCGC 5 cut(s) 112, 430, 700, 731, 1045
AclWI GGATC 4 cut(s) 525, 773, 1130, 1230
AcsI RAATTY 1 cut(s) 49
AcuI CTGAAG 1 cut(s) 1043
AcyI GRCGYC 3 cut(s) 271, 294, 601
AfaI GTAC 2 cut(s) 17, 302
AfiI CCNNNNNNNGG 5 cut(s) 502, 751, 866, 1018, 1081
AgsI TTSAA 1 cut(s) 7
AhdI GACNNNNNGTC 1 cut(s) 88
AjiI CACGTC 2 cut(s) 529, 811
AjnI CCWGG 4 cut(s) 495, 744, 1080, 1229
AluBI AGCT 5 cut(s) 29, 989, 1027, 1057, 1141
AluI AGCT 5 cut(s) 29, 989, 1027, 1057, 1141
Alw21I GWGCWC 3 cut(s) 396, 628, 691
Alw26I GTCTC 9 cut(s) 347, 461, 478, 505, 544, 700, 752, 855, 906
AlwI GGATC 4 cut(s) 525, 773, 1130, 1230
Ama87I CYCGRG 6 cut(s) 464, 471, 534, 794, 903, 925
AoxI GGCC 4 cut(s) 119, 747, 1078, 1212
ApeKI GCWGC 3 cut(s) 63, 66, 1015
ApoI RAATTY 1 cut(s) 49
AspLEI GCGC 4 cut(s) 61, 63, 620, 924
AspS9I GGNCC 2 cut(s) 82, 1072
AsuC2I CCSGG 1 cut(s) 1012
AsuHPI GGTGA 5 cut(s) 44, 290, 428, 536, 748
AvaI CYCGRG 6 cut(s) 464, 471, 534, 794, 903, 925
AvaII GGWCC 2 cut(s) 82, 1072
AxyI CCTNAGG 1 cut(s) 783
BaeGI GKGCMC 1 cut(s) 456
BanI GGYRCC 1 cut(s) 453
BauI CACGAG 1 cut(s) 885
Bbv12I GWGCWC 3 cut(s) 396, 628, 691
BbvI GCAGC 3 cut(s) 75, 78, 1002
BccI CCATC 2 cut(s) 184, 1129
BceAI ACGGC 2 cut(s) 73, 734
BciT130I CCWGG 4 cut(s) 497, 746, 1082, 1231
BclI TGATCA 1 cut(s) 403
BcnI CCSGG 1 cut(s) 1012
BcoDI GTCTC 9 cut(s) 347, 461, 478, 505, 544, 700, 752, 855, 906
BfaI CTAG 2 cut(s) 383, 659
BfmI CTRYAG 2 cut(s) 801, 1016
BfoI RGCGCY 1 cut(s) 621
BfuAI ACCTGC 1 cut(s) 93
BglII AGATCT 2 cut(s) 564, 929
BisI GCNGC 3 cut(s) 64, 67, 1016
BlsI GCNGC 3 cut(s) 65, 68, 1017
BmcAI AGTACT 1 cut(s) 17
Bme1390I CCNGG 5 cut(s) 497, 746, 1012, 1082, 1231
Bme18I GGWCC 2 cut(s) 82, 1072
BmeRI GACNNNNNGTC 1 cut(s) 88
BmeT110I CYCGRG 6 cut(s) 464, 471, 534, 794, 903, 925
BmgBI CACGTC 2 cut(s) 529, 811
BmgT120I GGNCC 2 cut(s) 82, 1072
BmiI GGNNCC 3 cut(s) 239, 455, 546
BmrFI CCNGG 5 cut(s) 497, 746, 1012, 1082, 1231
BmrI ACTGGG 2 cut(s) 292, 857
BmsI GCATC 2 cut(s) 652, 885
BmuI ACTGGG 2 cut(s) 292, 857
BpmI CTGGAG 2 cut(s) 996, 1163
BpuEI CTTGAG 1 cut(s) 420
BpuMI CCSGG 1 cut(s) 1012
Bsa29I ATCGAT 1 cut(s) 879
BsaBI GATNNNNATC 1 cut(s) 375
BsaHI GRCGYC 3 cut(s) 271, 294, 601
BsaI GGTCTC 4 cut(s) 505, 544, 700, 906
BsaJI CCNNGG 5 cut(s) 204, 495, 750, 1075, 1158
BsaWI WCCGGW 1 cut(s) 691
BsaXI ACNNNNNCTCC 4 cut(s) 473, 503, 969, 999
Bsc4I CCNNNNNNNGG 5 cut(s) 502, 751, 866, 1018, 1081
Bse1I ACTGG 3 cut(s) 298, 588, 863
Bse21I CCTNAGG 1 cut(s) 783
Bse8I GATNNNNATC 1 cut(s) 375
BseBI CCWGG 4 cut(s) 497, 746, 1082, 1231
BseCI ATCGAT 1 cut(s) 879
BseDI CCNNGG 5 cut(s) 204, 495, 750, 1075, 1158
BseGI GGATG 2 cut(s) 47, 1140
BseJI GATNNNNATC 1 cut(s) 375
BseLI CCNNNNNNNGG 5 cut(s) 502, 751, 866, 1018, 1081
BseMII CTCAG 2 cut(s) 774, 1196
BseNI ACTGG 3 cut(s) 298, 588, 863
BsePI GCGCGC 1 cut(s) 59
BseRI GAGGAG 3 cut(s) 590, 1144, 1178
BseSI GKGCMC 1 cut(s) 456
BseXI GCAGC 3 cut(s) 75, 78, 1002
BsgI GTGCAG 1 cut(s) 253
Bsh1236I CGCG 4 cut(s) 61, 700, 922, 1127
Bsh1285I CGRYCG 1 cut(s) 430
BshFI GGCC 4 cut(s) 121, 749, 1080, 1214
BshNI GGYRCC 1 cut(s) 453
BshVI ATCGAT 1 cut(s) 879
BsiEI CGRYCG 1 cut(s) 430
BsiHKAI GWGCWC 3 cut(s) 396, 628, 691
BsiHKCI CYCGRG 6 cut(s) 464, 471, 534, 794, 903, 925
BsiSI CCGG 2 cut(s) 692, 1012
BslFI GGGAC 2 cut(s) 475, 843
BslI CCNNNNNNNGG 5 cut(s) 502, 751, 866, 1018, 1081
BsmAI GTCTC 9 cut(s) 347, 461, 478, 505, 544, 700, 752, 855, 906
BsmBI CGTCTC 1 cut(s) 855
BsmFI GGGAC 2 cut(s) 475, 843
BsmI GAATGC 2 cut(s) 839, 1036
BsnI GGCC 4 cut(s) 121, 749, 1080, 1214
Bso31I GGTCTC 4 cut(s) 505, 544, 700, 906
BsoBI CYCGRG 6 cut(s) 464, 471, 534, 794, 903, 925
Bsp1286I GDGCHC 4 cut(s) 396, 456, 628, 691
Bsp19I CCATGG 1 cut(s) 1158
Bsp68I TCGCGA 1 cut(s) 1127
BspACI CCGC 5 cut(s) 112, 430, 700, 731, 1045
BspANI GGCC 4 cut(s) 121, 749, 1080, 1214
BspCNI CTCAG 2 cut(s) 775, 1197
BspDI ATCGAT 1 cut(s) 879
BspFNI CGCG 4 cut(s) 61, 700, 922, 1127
BspLI GGNNCC 3 cut(s) 239, 455, 546
BspMAI CTGCAG 1 cut(s) 1020
BspMI ACCTGC 1 cut(s) 93
BspPI GGATC 4 cut(s) 525, 773, 1130, 1230
BspT107I GGYRCC 1 cut(s) 453
BspTNI GGTCTC 4 cut(s) 505, 544, 700, 906
BsrBI CCGCTC 1 cut(s) 1045
BsrI ACTGG 3 cut(s) 298, 588, 863
BssECI CCNNGG 5 cut(s) 204, 495, 750, 1075, 1158
BssHII GCGCGC 1 cut(s) 59
BssNI GRCGYC 3 cut(s) 271, 294, 601
BssSI CACGAG 1 cut(s) 885
BssT1I CCWWGG 2 cut(s) 204, 1158
Bst2BI CACGAG 1 cut(s) 885
Bst2UI CCWGG 4 cut(s) 497, 746, 1082, 1231
Bst4CI ACNGT 2 cut(s) 489, 553
Bst6I CTCTTC 1 cut(s) 582
BstACI GRCGYC 3 cut(s) 271, 294, 601
BstC8I GCNNGC 6 cut(s) 61, 106, 110, 236, 1043, 1047
BstDEI CTNAG 2 cut(s) 783, 1205
BstDSI CCRYGG 2 cut(s) 750, 1158
BstEII GGTNACC 1 cut(s) 736
BstF5I GGATG 2 cut(s) 47, 1140
BstFNI CGCG 4 cut(s) 61, 700, 922, 1127
BstH2I RGCGCY 1 cut(s) 621
BstHHI GCGC 4 cut(s) 61, 63, 620, 924
BstMAI GTCTC 9 cut(s) 347, 461, 478, 505, 544, 700, 752, 855, 906
BstMCI CGRYCG 1 cut(s) 430
BstMWI GCNNNNNNNGC 5 cut(s) 118, 194, 302, 615, 1024
BstNI CCWGG 4 cut(s) 497, 746, 1082, 1231
BstPI GGTNACC 1 cut(s) 736
BstSCI CCNGG 5 cut(s) 495, 744, 1010, 1080, 1229
BstSFI CTRYAG 2 cut(s) 801, 1016
BstSLI GKGCMC 1 cut(s) 456
BstUI CGCG 4 cut(s) 61, 700, 922, 1127
BstV1I GCAGC 3 cut(s) 75, 78, 1002
BstX2I RGATCY 5 cut(s) 517, 564, 778, 929, 1222
BstXI CCANNNNNNTGG 1 cut(s) 974
BstYI RGATCY 5 cut(s) 517, 564, 778, 929, 1222
Bsu15I ATCGAT 1 cut(s) 879
Bsu36I CCTNAGG 1 cut(s) 783
BsuRI GGCC 4 cut(s) 121, 749, 1080, 1214
BsuTUI ATCGAT 1 cut(s) 879
BtgI CCRYGG 2 cut(s) 750, 1158
BtgZI GCGATG 2 cut(s) 203, 1180
BtrI CACGTC 2 cut(s) 529, 811
BtsCI GGATG 2 cut(s) 47, 1140
BtsIMutI CAGTG 1 cut(s) 1202
BtuMI TCGCGA 1 cut(s) 1127
BveI ACCTGC 1 cut(s) 93
Cac8I GCNNGC 6 cut(s) 61, 106, 110, 236, 1043, 1047
CfoI GCGC 4 cut(s) 61, 63, 620, 924
Cfr13I GGNCC 2 cut(s) 82, 1072
ClaI ATCGAT 1 cut(s) 879
CseI GACGC 4 cut(s) 260, 302, 590, 650
Csp6I GTAC 2 cut(s) 16, 301
CviAII CATG 5 cut(s) 123, 143, 443, 968, 1159
CviQI GTAC 2 cut(s) 16, 301
DdeI CTNAG 2 cut(s) 783, 1205
DrdI GACNNNNNNGTC 1 cut(s) 1190
DriI GACNNNNNGTC 1 cut(s) 88
DseDI GACNNNNNNGTC 1 cut(s) 1190
Eam1104I CTCTTC 1 cut(s) 582
Eam1105I GACNNNNNGTC 1 cut(s) 88
EarI CTCTTC 1 cut(s) 582
EciI GGCGGA 1 cut(s) 746
Eco130I CCWWGG 2 cut(s) 204, 1158
Eco31I GGTCTC 4 cut(s) 505, 544, 700, 906
Eco47I GGWCC 2 cut(s) 82, 1072
Eco57I CTGAAG 1 cut(s) 1043
Eco81I CCTNAGG 1 cut(s) 783
Eco88I CYCGRG 6 cut(s) 464, 471, 534, 794, 903, 925
Eco91I GGTNACC 1 cut(s) 736
EcoO109I RGGNCCY 1 cut(s) 82
EcoO65I GGTNACC 1 cut(s) 736
EcoRII CCWGG 4 cut(s) 495, 744, 1080, 1229
EcoT14I CCWWGG 2 cut(s) 204, 1158
ErhI CCWWGG 2 cut(s) 204, 1158
Esp3I CGTCTC 1 cut(s) 855
FaeI CATG 5 cut(s) 126, 146, 446, 971, 1162
FaiI YATR 8 cut(s) 102, 124, 144, 444, 959, 969, 1100, 1160
FaqI GGGAC 2 cut(s) 475, 843
FatI CATG 5 cut(s) 122, 142, 442, 967, 1158
FauI CCCGC 3 cut(s) 105, 693, 1038
FbaI TGATCA 1 cut(s) 403
Fnu4HI GCNGC 3 cut(s) 64, 67, 1016
FokI GGATG 2 cut(s) 54, 1147
Fsp4HI GCNGC 3 cut(s) 64, 67, 1016
FspBI CTAG 2 cut(s) 383, 659
GlaI GCGC 4 cut(s) 60, 62, 619, 923
GluI GCNGC 3 cut(s) 64, 67, 1016
GsuI CTGGAG 2 cut(s) 996, 1163
HaeII RGCGCY 1 cut(s) 621
HaeIII GGCC 4 cut(s) 121, 749, 1080, 1214
HapII CCGG 2 cut(s) 692, 1012
HgaI GACGC 4 cut(s) 260, 302, 590, 650
HhaI GCGC 4 cut(s) 61, 63, 620, 924
Hin1I GRCGYC 3 cut(s) 271, 294, 601
Hin1II CATG 5 cut(s) 126, 146, 446, 971, 1162
Hin6I GCGC 4 cut(s) 59, 61, 618, 922
HinP1I GCGC 4 cut(s) 59, 61, 618, 922
HindIII AAGCTT 1 cut(s) 1055
HinfI GANTC 3 cut(s) 347, 469, 797
HpaII CCGG 2 cut(s) 692, 1012
HphI GGTGA 5 cut(s) 44, 290, 428, 536, 748
Hpy166II GTNNAC 1 cut(s) 1072
Hpy188I TCNGA 4 cut(s) 352, 544, 1062, 1227
Hpy188III TCNNGA 8 cut(s) 7, 241, 473, 782, 927, 975, 1001, 1126
Hpy8I GTNNAC 1 cut(s) 1072
Hpy99I CGWCG 2 cut(s) 296, 553
HpyAV CCTTC 2 cut(s) 111, 1112
HpyCH4III ACNGT 2 cut(s) 489, 553
HpyCH4IV ACGT 5 cut(s) 161, 528, 681, 810, 848
HpyCH4V TGCA 7 cut(s) 13, 197, 234, 637, 790, 842, 1018
HpyF10VI GCNNNNNNNGC 5 cut(s) 118, 194, 302, 615, 1024
HpyF3I CTNAG 2 cut(s) 783, 1205
HpySE526I ACGT 5 cut(s) 161, 528, 681, 810, 848
Hsp92I GRCGYC 3 cut(s) 271, 294, 601
Hsp92II CATG 5 cut(s) 126, 146, 446, 971, 1162
HspAI GCGC 4 cut(s) 59, 61, 618, 922
Ksp22I TGATCA 1 cut(s) 403
LmnI GCTCC 7 cut(s) 166, 243, 694, 1024, 1138, 1144, 1204
Lsp1109I GCAGC 3 cut(s) 75, 78, 1002
LweI GCATC 2 cut(s) 652, 885
MaeI CTAG 2 cut(s) 383, 659
MaeII ACGT 5 cut(s) 161, 528, 681, 810, 848
MaeIII GTNAC 6 cut(s) 319, 397, 524, 579, 736, 844
MbiI CCGCTC 1 cut(s) 1045
MboII GAAGA 3 cut(s) 599, 788, 836
MflI RGATCY 5 cut(s) 517, 564, 778, 929, 1222
MhlI GDGCHC 4 cut(s) 396, 456, 628, 691
MluCI AATT 5 cut(s) 49, 313, 961, 992, 1110
MlyI GAGTC 2 cut(s) 463, 806
MmeI TCCRAC 1 cut(s) 144
MseI TTAA 2 cut(s) 555, 1053
MslI CAYNNNNRTG 1 cut(s) 447
MspI CCGG 2 cut(s) 692, 1012
MspR9I CCNGG 5 cut(s) 497, 746, 1012, 1082, 1231
Mva1269I GAATGC 2 cut(s) 839, 1036
MvaI CCWGG 4 cut(s) 497, 746, 1082, 1231
MvnI CGCG 4 cut(s) 61, 700, 922, 1127
MwoI GCNNNNNNNGC 5 cut(s) 118, 194, 302, 615, 1024
NciI CCSGG 1 cut(s) 1012
NcoI CCATGG 1 cut(s) 1158
NlaIII CATG 5 cut(s) 126, 146, 446, 971, 1162
NlaIV GGNNCC 3 cut(s) 239, 455, 546
NmeAIII GCCGAG 1 cut(s) 482
NmuCI GTSAC 2 cut(s) 524, 736
NruI TCGCGA 1 cut(s) 1127
PaeR7I CTCGAG 2 cut(s) 471, 925
PauI GCGCGC 1 cut(s) 59
PcsI WCGNNNNNNNCGW 1 cut(s) 356
PctI GAATGC 2 cut(s) 839, 1036
PfeI GAWTC 1 cut(s) 347
PflMI CCANNNNNTGG 1 cut(s) 751
PkrI GCNGC 3 cut(s) 65, 68, 1017
PleI GAGTC 2 cut(s) 463, 805
PpsI GAGTC 2 cut(s) 463, 805
PpuMI RGGWCCY 1 cut(s) 82
Psp5II RGGWCCY 1 cut(s) 82
Psp6I CCWGG 4 cut(s) 495, 744, 1080, 1229
PspEI GGTNACC 1 cut(s) 736
PspGI CCWGG 4 cut(s) 495, 744, 1080, 1229
PspN4I GGNNCC 3 cut(s) 239, 455, 546
PspPI GGNCC 2 cut(s) 82, 1072
PspPPI RGGWCCY 1 cut(s) 82
PstI CTGCAG 1 cut(s) 1020
PsuI RGATCY 5 cut(s) 517, 564, 778, 929, 1222
PteI GCGCGC 1 cut(s) 59
RruI TCGCGA 1 cut(s) 1127
RsaI GTAC 2 cut(s) 17, 302
RsaNI GTAC 2 cut(s) 16, 301
RseI CAYNNNNRTG 1 cut(s) 447
SaqAI TTAA 2 cut(s) 555, 1053
SatI GCNGC 3 cut(s) 64, 67, 1016
Sau96I GGNCC 2 cut(s) 82, 1072
ScaI AGTACT 1 cut(s) 17
SchI GAGTC 2 cut(s) 463, 806
ScrFI CCNGG 5 cut(s) 497, 746, 1012, 1082, 1231
SduI GDGCHC 4 cut(s) 396, 456, 628, 691
SfaNI GCATC 2 cut(s) 652, 885
SfcI CTRYAG 2 cut(s) 801, 1016
Sfr274I CTCGAG 2 cut(s) 471, 925
SinI GGWCC 2 cut(s) 82, 1072
SlaI CTCGAG 2 cut(s) 471, 925
SmiMI CAYNNNNRTG 1 cut(s) 447
SmlI CTYRAG 3 cut(s) 435, 471, 925
SmoI CTYRAG 3 cut(s) 435, 471, 925
Sse9I AATT 5 cut(s) 49, 313, 961, 992, 1110
SsiI CCGC 5 cut(s) 112, 430, 700, 731, 1045
SspMI CTAG 2 cut(s) 383, 659
StyD4I CCNGG 5 cut(s) 495, 744, 1010, 1080, 1229
StyI CCWWGG 2 cut(s) 204, 1158
TaaI ACNGT 2 cut(s) 489, 553
TaiI ACGT 5 cut(s) 164, 531, 684, 813, 851
TaqI TCGA 6 cut(s) 20, 472, 774, 822, 879, 926
TaqII GACCGA 1 cut(s) 1089
TasI AATT 5 cut(s) 49, 313, 961, 992, 1110
TatI WGTACW 1 cut(s) 15
TfiI GAWTC 1 cut(s) 347
Tru1I TTAA 2 cut(s) 555, 1053
Tru9I TTAA 2 cut(s) 555, 1053
TscAI CASTG 1 cut(s) 1209
TseFI GTSAC 2 cut(s) 524, 736
TseI GCWGC 3 cut(s) 63, 66, 1015
Tsp45I GTSAC 2 cut(s) 524, 736
TspDTI ATGAA 4 cut(s) 38, 431, 974, 1131
TspGWI ACGGA 3 cut(s) 54, 307, 559
TspRI CASTG 1 cut(s) 1209
Van91I CCANNNNNTGG 1 cut(s) 751
VpaK11BI GGWCC 2 cut(s) 82, 1072
XapI RAATTY 1 cut(s) 49
XcmI CCANNNNNNNNNTGG 1 cut(s) 748
XhoI CTCGAG 2 cut(s) 471, 925
XspI CTAG 2 cut(s) 383, 659
ZrmI AGTACT 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.