Rmu_sc0005856.1_g000012

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005856.1
OG0000075
Physical Location & Seq
Forward (+)
47648 .. 51582
3935 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005856.1_g000012.1.cds

Sequence Viewer

Length: 1524 bp
atggagttggagcgagcgttcgcggtggaggaagctagtcgtcaagaaactgagaaagccatcgctccattgagggagtcaaacctggatcttaccgggaagctgcaacgggcggaggatggtctgagattggttgatcaagtcagggcccgggtccgagaacgcgatgtcgagttggagctttgtgcgactgccttggagagtttgtctccctatcctaatcgtgtggtggatttgaaggggcaggttggtaatttacaatgggaggttgaccgtctacgagatgttgagcttgaggcaggcgagaaggaggcagagatggagcggctcaggaatgagatgtggcggacaaggcggtggatctctatctccggtcaagccattttccaagagaagatgaacaaagccttctcggatagggtcttgcacttgattagagatggtatcgctactgggtggattgaccaagagaagatggtgtgtgatatgcaggccaagaaagcagcaagatcgcaggctagtgcagcgagtagtgattggagttctaggatcgtgatccggagccccttgctggaggcgagagcgagtggcgacgcgttaacattgggtaatactgtttggcgtggtaccgcgttggcatttttcgttgctgccttacatcgcgtattgttgcagtgtttaaggggcttaggaatcgcgatgtgtcatgtgcgcaagggttcgcgagggacagcatttggctgtgtcagcgggaccggcggtcagcaatatcgcattaacattctttcattcgttggattcgttggcgtatcgcgtagcattcattcgttcattggcgtatcgcgtaatattcattcgttcattgacgtatcgcgtaacattcatttgatcattcattggatcgccattggtagcccaagggttcacgagggacagcatttttctatgtcagcgggactggccgtgagcgatatcgcattaacattctttcattcgttggattctttggagtatggaatggcattgattcgttcattggcgtatcgccgttgcagaggcgagctcagaacccctgccctacttcgggtagtatcggagatgctggatgttccacggatgtgggaatgtgataccatctgttcccctcaagtagaaggtagcgggtccgacgacctcgatgatttcgtacagcccttcccaggtggccttgagccccgttggggttggcatcttttccttcatcacccagtcccggacagagaggaggcgaggcatgactttgacgttataatagcgagcgatacactacttattattgatattccagaggtgggctcgctagcaacgctcttccaagatatcagagtcgaggttcaacccttccgagttggtgagtgggtcgaaacatgcgaccctctcgctacttacctcctactagataaggatcacggcctcggtgtcgaaggacaagcagaaaggggactcgccattggccttcgtaggggtcgttcttattgcccatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

507

Amino Acids

56.82

Weight (kDa)

5.97

Isoelectric Point (pI)

44.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1289
Acc16I TGCGCA 1 cut(s) 713
Acc36I ACCTGC 1 cut(s) 235
Acc65I GGTACC 1 cut(s) 626
AccB1I GGYRCC 1 cut(s) 626
AccBSI CCGCTC 1 cut(s) 325
AccI GTMKAC 1 cut(s) 277
AccIII TCCGGA 1 cut(s) 558
AclWI GGATC 6 cut(s) 96, 368, 550, 557, 908, 1452
AcoI YGGCCR 1 cut(s) 960
AfaI GTAC 2 cut(s) 628, 1188
AfiI CCNNNNNNNGG 8 cut(s) 571, 1083, 1084, 1199, 1220, 1252, 1331, 1501
AflIII ACRYGT 1 cut(s) 594
AgsI TTSAA 2 cut(s) 238, 1376
AhdI GACNNNNNGTC 1 cut(s) 759
AjnI CCWGG 2 cut(s) 84, 1198
AleI CACNNNNGTG 1 cut(s) 1117
AloI GAACNNNNNNTCC 1 cut(s) 34
AluBI AGCT 5 cut(s) 35, 103, 181, 292, 1063
AluI AGCT 5 cut(s) 35, 103, 181, 292, 1063
Alw21I GWGCWC 1 cut(s) 1065
Alw26I GTCTC 1 cut(s) 213
AlwI GGATC 6 cut(s) 96, 368, 550, 557, 908, 1452
Ama87I CYCGRG 1 cut(s) 150
Aor13HI TCCGGA 1 cut(s) 558
AoxI GGCC 6 cut(s) 147, 492, 960, 1204, 1450, 1492
ApaI GGGCCC 1 cut(s) 151
ApeKI GCWGC 4 cut(s) 103, 503, 524, 650
Asp718I GGTACC 1 cut(s) 626
AspLEI GCGC 1 cut(s) 714
AspS9I GGNCC 5 cut(s) 147, 148, 154, 753, 1164
AsuC2I CCSGG 4 cut(s) 97, 151, 152, 1253
AsuHPI GGTGA 2 cut(s) 1235, 1403
AsuNHI GCTAGC 1 cut(s) 1339
AvaI CYCGRG 1 cut(s) 150
AvaII GGWCC 3 cut(s) 154, 753, 1164
BaeGI GKGCMC 1 cut(s) 151
BanI GGYRCC 1 cut(s) 626
BanII GRGCYC 5 cut(s) 151, 566, 1065, 1215, 1337
BauI CACGAG 1 cut(s) 926
Bbv12I GWGCWC 1 cut(s) 1065
BbvI GCAGC 4 cut(s) 90, 515, 536, 637
BccI CCATC 6 cut(s) 68, 113, 313, 434, 469, 1142
BceAI ACGGC 3 cut(s) 947, 1032, 1465
BcgI CGANNNNNNTGC 2 cut(s) 492, 526
BciT130I CCWGG 2 cut(s) 86, 1200
BclI TGATCA 2 cut(s) 136, 888
BcnI CCSGG 4 cut(s) 97, 151, 152, 1253
BcoDI GTCTC 1 cut(s) 213
BfaI CTAG 5 cut(s) 36, 519, 546, 1340, 1436
BfuAI ACCTGC 1 cut(s) 235
BisI GCNGC 5 cut(s) 104, 326, 504, 525, 651
BlsI GCNGC 5 cut(s) 105, 327, 505, 526, 652
Bme1390I CCNGG 6 cut(s) 86, 97, 151, 152, 1200, 1253
Bme18I GGWCC 3 cut(s) 154, 753, 1164
BmeRI GACNNNNNGTC 1 cut(s) 759
BmeT110I CYCGRG 1 cut(s) 150
BmgT120I GGNCC 5 cut(s) 147, 148, 154, 753, 1164
BmiI GGNNCC 6 cut(s) 149, 155, 563, 628, 754, 1165
BmrFI CCNGG 6 cut(s) 86, 97, 151, 152, 1200, 1253
BmrI ACTGGG 2 cut(s) 462, 1241
BmsI GCATC 2 cut(s) 1089, 1237
BmtI GCTAGC 1 cut(s) 1343
BmuI ACTGGG 2 cut(s) 462, 1241
BplI GAGNNNNNCTC 6 cut(s) 193, 225, 1047, 1079, 1319, 1351
BpmI CTGGAG 1 cut(s) 593
Bpu10I CCTNAGC 2 cut(s) 329, 688
BpuEI CTTGAG 3 cut(s) 314, 1131, 1229
BpuMI CCSGG 4 cut(s) 97, 151, 152, 1253
BsaBI GATNNNNATC 3 cut(s) 365, 554, 1443
BsaJI CCNNGG 6 cut(s) 150, 195, 917, 1112, 1198, 1453
BsaWI WCCGGW 2 cut(s) 371, 558
BsaXI ACNNNNNCTCC 3 cut(s) 32, 191, 221
Bsc4I CCNNNNNNNGG 8 cut(s) 571, 1083, 1084, 1199, 1220, 1252, 1331, 1501
Bse118I RCCGGY 1 cut(s) 755
Bse1I ACTGG 3 cut(s) 457, 963, 1247
Bse8I GATNNNNATC 3 cut(s) 365, 554, 1443
BseAI TCCGGA 1 cut(s) 558
BseBI CCWGG 2 cut(s) 86, 1200
BseDI CCNNGG 6 cut(s) 150, 195, 917, 1112, 1198, 1453
BseGI GGATG 3 cut(s) 124, 1111, 1122
BseJI GATNNNNATC 3 cut(s) 365, 554, 1443
BseLI CCNNNNNNNGG 8 cut(s) 571, 1083, 1084, 1199, 1220, 1252, 1331, 1501
BseMII CTCAG 4 cut(s) 42, 116, 343, 1078
BseNI ACTGG 3 cut(s) 457, 963, 1247
BseRI GAGGAG 1 cut(s) 1277
BseSI GKGCMC 1 cut(s) 151
BseXI GCAGC 4 cut(s) 90, 515, 536, 637
BsgI GTGCAG 1 cut(s) 543
BshFI GGCC 6 cut(s) 149, 494, 962, 1206, 1452, 1494
BshNI GGYRCC 1 cut(s) 626
BsiHKAI GWGCWC 1 cut(s) 1065
BsiHKCI CYCGRG 1 cut(s) 150
BsiSI CCGG 6 cut(s) 96, 151, 372, 559, 756, 1253
BslFI GGGAC 6 cut(s) 742, 766, 945, 969, 1235, 1494
BslI CCNNNNNNNGG 8 cut(s) 571, 1083, 1084, 1199, 1220, 1252, 1331, 1501
BsmAI GTCTC 1 cut(s) 213
BsmFI GGGAC 6 cut(s) 742, 766, 945, 969, 1235, 1494
BsmI GAATGC 1 cut(s) 819
BsnI GGCC 6 cut(s) 149, 494, 962, 1206, 1452, 1494
BsoBI CYCGRG 1 cut(s) 150
Bsp120I GGGCCC 1 cut(s) 147
Bsp1286I GDGCHC 5 cut(s) 151, 566, 1065, 1215, 1337
Bsp13I TCCGGA 1 cut(s) 558
Bsp143I GATC 9 cut(s) 88, 136, 360, 509, 549, 555, 888, 900, 1444
Bsp68I TCGCGA 2 cut(s) 698, 724
BspANI GGCC 6 cut(s) 149, 494, 962, 1206, 1452, 1494
BspCNI CTCAG 4 cut(s) 43, 117, 342, 1077
BspEI TCCGGA 1 cut(s) 558
BspLI GGNNCC 6 cut(s) 149, 155, 563, 628, 754, 1165
BspMI ACCTGC 1 cut(s) 235
BspOI GCTAGC 1 cut(s) 1343
BspPI GGATC 6 cut(s) 96, 368, 550, 557, 908, 1452
BspQI GCTCTTC 1 cut(s) 1355
BspT107I GGYRCC 1 cut(s) 626
BsrBI CCGCTC 1 cut(s) 325
BsrFI RCCGGY 1 cut(s) 755
BsrI ACTGG 3 cut(s) 457, 963, 1247
BssAI RCCGGY 1 cut(s) 755
BssECI CCNNGG 6 cut(s) 150, 195, 917, 1112, 1198, 1453
BssMI GATC 9 cut(s) 88, 136, 360, 509, 549, 555, 888, 900, 1444
BssSI CACGAG 1 cut(s) 926
BssT1I CCWWGG 2 cut(s) 195, 917
Bst2BI CACGAG 1 cut(s) 926
Bst2UI CCWGG 2 cut(s) 86, 1200
Bst4CI ACNGT 2 cut(s) 275, 616
Bst6I CTCTTC 1 cut(s) 1355
BstC8I GCNNGC 8 cut(s) 15, 301, 492, 516, 1061, 1297, 1337, 1341
BstDEI CTNAG 5 cut(s) 51, 125, 329, 688, 1064
BstDSI CCRYGG 1 cut(s) 1112
BstF5I GGATG 3 cut(s) 124, 1111, 1122
BstHHI GCGC 1 cut(s) 714
BstKTI GATC 9 cut(s) 91, 139, 363, 512, 552, 558, 891, 903, 1447
BstMAI GTCTC 1 cut(s) 213
BstMBI GATC 9 cut(s) 88, 136, 360, 509, 549, 555, 888, 900, 1444
BstMWI GCNNNNNNNGC 7 cut(s) 352, 500, 524, 747, 756, 959, 1345
BstNI CCWGG 2 cut(s) 86, 1200
BstNSI RCATGY 1 cut(s) 1410
BstSCI CCNGG 6 cut(s) 84, 95, 149, 150, 1198, 1251
BstSLI GKGCMC 1 cut(s) 151
BstV1I GCAGC 4 cut(s) 90, 515, 536, 637
BstX2I RGATCY 2 cut(s) 88, 360
BstXI CCANNNNNNTGG 1 cut(s) 1119
BstYI RGATCY 2 cut(s) 88, 360
BsuRI GGCC 6 cut(s) 149, 494, 962, 1206, 1452, 1494
BtgI CCRYGG 1 cut(s) 1112
BtgZI GCGATG 4 cut(s) 46, 180, 644, 713
BtsCI GGATG 3 cut(s) 124, 1111, 1122
BtsI GCAGTG 1 cut(s) 680
BtsIMutI CAGTG 1 cut(s) 680
BtuMI TCGCGA 2 cut(s) 698, 724
BveI ACCTGC 1 cut(s) 235
Cac8I GCNNGC 8 cut(s) 15, 301, 492, 516, 1061, 1297, 1337, 1341
CfoI GCGC 1 cut(s) 714
Cfr10I RCCGGY 1 cut(s) 755
Cfr13I GGNCC 5 cut(s) 147, 148, 154, 753, 1164
Cfr9I CCCGGG 1 cut(s) 150
CseI GACGC 1 cut(s) 602
Csp6I GTAC 2 cut(s) 627, 1187
CviAII CATG 3 cut(s) 707, 1274, 1407
CviQI GTAC 2 cut(s) 627, 1187
DdeI CTNAG 5 cut(s) 51, 125, 329, 688, 1064
DpnI GATC 9 cut(s) 90, 138, 362, 511, 551, 557, 890, 902, 1446
DpnII GATC 9 cut(s) 88, 136, 360, 509, 549, 555, 888, 900, 1444
DriI GACNNNNNGTC 1 cut(s) 759
EaeI YGGCCR 1 cut(s) 960
Eam1104I CTCTTC 1 cut(s) 1355
Eam1105I GACNNNNNGTC 1 cut(s) 759
EarI CTCTTC 1 cut(s) 1355
EciI GGCGGA 2 cut(s) 128, 361
Ecl136II GAGCTC 1 cut(s) 1063
Eco130I CCWWGG 2 cut(s) 195, 917
Eco24I GRGCYC 5 cut(s) 151, 566, 1065, 1215, 1337
Eco32I GATATC 2 cut(s) 973, 1360
Eco47I GGWCC 3 cut(s) 154, 753, 1164
Eco53kI GAGCTC 1 cut(s) 1063
Eco88I CYCGRG 1 cut(s) 150
EcoICRI GAGCTC 1 cut(s) 1063
EcoO109I RGGNCCY 1 cut(s) 147
EcoRII CCWGG 2 cut(s) 84, 1198
EcoRV GATATC 2 cut(s) 973, 1360
EcoT14I CCWWGG 2 cut(s) 195, 917
EcoT38I GRGCYC 5 cut(s) 151, 566, 1065, 1215, 1337
ErhI CCWWGG 2 cut(s) 195, 917
FaeI CATG 3 cut(s) 710, 1277, 1410
FaiI YATR 8 cut(s) 488, 708, 947, 1014, 1275, 1289, 1408, 1522
FaqI GGGAC 6 cut(s) 742, 766, 945, 969, 1235, 1494
FatI CATG 3 cut(s) 706, 1273, 1406
FauI CCCGC 3 cut(s) 743, 946, 1154
FbaI TGATCA 2 cut(s) 136, 888
FblI GTMKAC 1 cut(s) 277
Fnu4HI GCNGC 5 cut(s) 104, 326, 504, 525, 651
FokI GGATG 3 cut(s) 131, 1118, 1129
FriOI GRGCYC 5 cut(s) 151, 566, 1065, 1215, 1337
Fsp4HI GCNGC 5 cut(s) 104, 326, 504, 525, 651
FspBI CTAG 5 cut(s) 36, 519, 546, 1340, 1436
FspI TGCGCA 1 cut(s) 713
GlaI GCGC 1 cut(s) 713
GluI GCNGC 5 cut(s) 104, 326, 504, 525, 651
GsuI CTGGAG 1 cut(s) 593
HaeIII GGCC 6 cut(s) 149, 494, 962, 1206, 1452, 1494
HapII CCGG 6 cut(s) 96, 151, 372, 559, 756, 1253
HgaI GACGC 1 cut(s) 602
HhaI GCGC 1 cut(s) 714
Hin1II CATG 3 cut(s) 710, 1277, 1410
Hin6I GCGC 1 cut(s) 712
HinP1I GCGC 1 cut(s) 712
HincII GTYRAC 2 cut(s) 271, 600
HindII GTYRAC 2 cut(s) 271, 600
HinfI GANTC 7 cut(s) 77, 693, 798, 1001, 1027, 1365, 1482
HpaI GTTAAC 1 cut(s) 600
HpaII CCGG 6 cut(s) 96, 151, 372, 559, 756, 1253
HphI GGTGA 2 cut(s) 1235, 1403
Hpy166II GTNNAC 4 cut(s) 271, 278, 600, 925
Hpy188I TCNGA 8 cut(s) 126, 158, 415, 1067, 1096, 1168, 1364, 1385
Hpy188III TCNNGA 8 cut(s) 44, 331, 553, 559, 697, 723, 926, 1325
Hpy8I GTNNAC 4 cut(s) 271, 278, 600, 925
Hpy99I CGWCG 2 cut(s) 596, 1172
HpyAV CCTTC 9 cut(s) 232, 301, 418, 1148, 1204, 1247, 1390, 1457, 1505
HpyCH4III ACNGT 2 cut(s) 275, 616
HpyCH4IV ACGT 2 cut(s) 867, 1284
HpyCH4V TGCA 6 cut(s) 106, 427, 490, 524, 673, 1053
HpyF10VI GCNNNNNNNGC 7 cut(s) 352, 500, 524, 747, 756, 959, 1345
HpyF3I CTNAG 5 cut(s) 51, 125, 329, 688, 1064
HpySE526I ACGT 2 cut(s) 867, 1284
Hsp92II CATG 3 cut(s) 710, 1277, 1410
HspAI GCGC 1 cut(s) 712
Kpn2I TCCGGA 1 cut(s) 558
KpnI GGTACC 1 cut(s) 630
Ksp22I TGATCA 2 cut(s) 136, 888
KspAI GTTAAC 1 cut(s) 600
Kzo9I GATC 9 cut(s) 88, 136, 360, 509, 549, 555, 888, 900, 1444
LguI GCTCTTC 1 cut(s) 1355
LmnI GCTCC 5 cut(s) 10, 70, 178, 322, 561
Lsp1109I GCAGC 4 cut(s) 90, 515, 536, 637
LweI GCATC 2 cut(s) 1089, 1237
MaeI CTAG 5 cut(s) 36, 519, 546, 1340, 1436
MaeII ACGT 2 cut(s) 867, 1284
MaeIII GTNAC 1 cut(s) 875
MalI GATC 9 cut(s) 90, 138, 362, 511, 551, 557, 890, 902, 1446
MbiI CCGCTC 1 cut(s) 325
MboI GATC 9 cut(s) 88, 136, 360, 509, 549, 555, 888, 900, 1444
MboII GAAGA 3 cut(s) 406, 484, 1342
MflI RGATCY 2 cut(s) 88, 360
MhlI GDGCHC 5 cut(s) 151, 566, 1065, 1215, 1337
MluCI AATT 1 cut(s) 253
MluI ACGCGT 1 cut(s) 594
MlyI GAGTC 3 cut(s) 86, 1374, 1476
MmeI TCCRAC 4 cut(s) 156, 775, 978, 1191
MroI TCCGGA 1 cut(s) 558
MseI TTAA 4 cut(s) 599, 680, 777, 980
MslI CAYNNNNRTG 1 cut(s) 1117
MspA1I CMGCKG 2 cut(s) 750, 953
MspI CCGG 6 cut(s) 96, 151, 372, 559, 756, 1253
MspR9I CCNGG 6 cut(s) 86, 97, 151, 152, 1200, 1253
Mva1269I GAATGC 1 cut(s) 819
MvaI CCWGG 2 cut(s) 86, 1200
MwoI GCNNNNNNNGC 7 cut(s) 352, 500, 524, 747, 756, 959, 1345
NciI CCSGG 4 cut(s) 97, 151, 152, 1253
NdeII GATC 9 cut(s) 88, 136, 360, 509, 549, 555, 888, 900, 1444
NheI GCTAGC 1 cut(s) 1339
NlaIII CATG 3 cut(s) 710, 1277, 1410
NlaIV GGNNCC 6 cut(s) 149, 155, 563, 628, 754, 1165
NruI TCGCGA 2 cut(s) 698, 724
NsbI TGCGCA 1 cut(s) 713
NspI RCATGY 1 cut(s) 1410
OliI CACNNNNGTG 1 cut(s) 1117
PciSI GCTCTTC 1 cut(s) 1355
PcsI WCGNNNNNNNCGW 4 cut(s) 798, 1182, 1407, 1504
PctI GAATGC 1 cut(s) 819
PfeI GAWTC 4 cut(s) 693, 798, 1001, 1027
PfoI TCCNGGA 1 cut(s) 1251
PkrI GCNGC 5 cut(s) 105, 327, 505, 526, 652
PleI GAGTC 3 cut(s) 85, 1373, 1476
PpsI GAGTC 3 cut(s) 85, 1373, 1476
PsiI TTATAA 1 cut(s) 1289
Psp124BI GAGCTC 1 cut(s) 1065
Psp6I CCWGG 2 cut(s) 84, 1198
PspGI CCWGG 2 cut(s) 84, 1198
PspN4I GGNNCC 6 cut(s) 149, 155, 563, 628, 754, 1165
PspOMI GGGCCC 1 cut(s) 147
PspPI GGNCC 5 cut(s) 147, 148, 154, 753, 1164
PsrI GAACNNNNNNTAC 2 cut(s) 1492, 1524
PsuI RGATCY 2 cut(s) 88, 360
RruI TCGCGA 2 cut(s) 698, 724
RsaI GTAC 2 cut(s) 628, 1188
RsaNI GTAC 2 cut(s) 627, 1187
RseI CAYNNNNRTG 1 cut(s) 1117
SacI GAGCTC 1 cut(s) 1065
SapI GCTCTTC 1 cut(s) 1355
SaqAI TTAA 4 cut(s) 599, 680, 777, 980
SatI GCNGC 5 cut(s) 104, 326, 504, 525, 651
Sau3AI GATC 9 cut(s) 88, 136, 360, 509, 549, 555, 888, 900, 1444
Sau96I GGNCC 5 cut(s) 147, 148, 154, 753, 1164
SchI GAGTC 3 cut(s) 86, 1374, 1476
ScrFI CCNGG 6 cut(s) 86, 97, 151, 152, 1200, 1253
SduI GDGCHC 5 cut(s) 151, 566, 1065, 1215, 1337
SfaNI GCATC 2 cut(s) 1089, 1237
SinI GGWCC 3 cut(s) 154, 753, 1164
SmaI CCCGGG 1 cut(s) 152
SmiMI CAYNNNNRTG 1 cut(s) 1117
SmlI CTYRAG 3 cut(s) 293, 1146, 1208
SmoI CTYRAG 3 cut(s) 293, 1146, 1208
Sse9I AATT 1 cut(s) 253
SspI AATATT 1 cut(s) 850
SspMI CTAG 5 cut(s) 36, 519, 546, 1340, 1436
SstI GAGCTC 1 cut(s) 1065
StyD4I CCNGG 6 cut(s) 84, 95, 149, 150, 1198, 1251
StyI CCWWGG 2 cut(s) 195, 917
TaaI ACNGT 2 cut(s) 275, 616
TaiI ACGT 2 cut(s) 870, 1287
TaqI TCGA 5 cut(s) 171, 1176, 1368, 1401, 1461
TasI AATT 1 cut(s) 253
TauI GCSGC 1 cut(s) 328
TfiI GAWTC 4 cut(s) 693, 798, 1001, 1027
Tru1I TTAA 4 cut(s) 599, 680, 777, 980
Tru9I TTAA 4 cut(s) 599, 680, 777, 980
TscAI CASTG 1 cut(s) 680
TseI GCWGC 4 cut(s) 103, 503, 524, 650
TspGWI ACGGA 1 cut(s) 1129
TspMI CCCGGG 1 cut(s) 150
TspRI CASTG 1 cut(s) 680
VpaK11BI GGWCC 3 cut(s) 154, 753, 1164
XceI RCATGY 1 cut(s) 1410
XmaI CCCGGG 1 cut(s) 150
XmiI GTMKAC 1 cut(s) 277
XspI CTAG 5 cut(s) 36, 519, 546, 1340, 1436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.