Rmu_sc0000859.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000859.1
OG0000075
Physical Location & Seq
Forward (+)
33170 .. 37575
4406 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000859.1_g000006.1.cds

Sequence Viewer

Length: 1755 bp
atggcatcgttgtggtgggttttgggagttgggttgggggttgttgggtgtctctgcattgtggctctaaggtggtgtgcagattttgaaaattttgttatgaggcgggttggggaaggcgatagccacgcctggcatcccgaggaggaggcgaatcacgagagttctggctctaaggaatacgagttgttggaggttcgtcagtctccggccaaaatgccgaatcaggctgctagcaagagtgatgccctttacgttgatgctgccactaaagccattatcgaggaattgattcgcgattctgaggctgtcaggtgggcgaacattaacatgcagacaaggaaggtttacgattccagtcatcgtgtagccttgcagttgtctcgagatgtgtatgataggttccttgatagggtgctggagttccttaatagccaggtagtggatgctgaaggggcaccaaagggtgttgatgttggcgaggtgcaaaatgggcaagcgagacagagtccttcaggtcatgcagcgtcctcgagaccaggccgatcagttggcagcgtgcccacgaaaccacgcgggcgaggcgagacagcgtcctcaggcagatgtagaatagaggaagcgggctcccatgacgttagggtagtgatgcaggtttcatcccctattgaagtggaaatttccttaaaggaattatttgaggatgttgagcggtggcagagtgatgccagcgcgaggactggcttggtggaagatgttgtctttgaaaagttggaaggtgttctcgaggtggctactgacgctggagatcctcagctagatgccagtatgtgtagtaatggtgaggatattcaggtggctgaggtggcattttgtgcccatccgggagaggggaagaggactgcctctcaacttcgtctcaggagtcccccggtgggggtgagcatggatcttaatggaggaaagaggtctcaggttgatggaacagtccattcgaggtccacgagtaagggatctcgacattctcatgatgaactggctggaggcctttcttgtactcttggtgaaattggcattactgatggcgttaccctgcacacggtgtcagatctgtcaaactttcaccgtgatcagggtcgggttaatactaaagatcctcgagctgggtgtagcgatgctcaggaaaggttgataagggctgtgaatatgaattaccaggcatcgacagagctgttggaacgttttgatcgggagattgcctggctcaggggccgagttggaggggaaagacagagggcccaagagcttcaggacttgctggatagcgacaaggttggccgcaaggagatgaggcgagcgatcgatgaagacattgcgaggagaatggagttggagcagtcgttggctatggagaagactcaacacttagccctttatcctgatcacattactgagctggaggggcagctagggattttgcagggagaggttgatcgcttgtgggttgttacacatcaggtgggagaaaaagatgcaaagttggagcgcttgtggaaggaggtggccgaggagtggtctcgggccagctctttcgctgatgactgcctcagtctgtgtgcgcaagcggtgacctatgcagacaaactcaagaaggccaagagggatggtacatttcgtgccgtcgatgagtacttgttgtcgccccccttccaggcgaggctggatcaggcgttctcaaaaggtgcccttcactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

584

Amino Acids

64.56

Weight (kDa)

5.34

Isoelectric Point (pI)

46.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1620
Acc36I ACCTGC 1 cut(s) 643
AccB1I GGYRCC 2 cut(s) 457, 1742
AccB7I CCANNNNNTGG 1 cut(s) 442
AccBSI CCGCTC 1 cut(s) 712
AccII CGCG 3 cut(s) 297, 576, 734
AciI CCGC 6 cut(s) 106, 576, 623, 712, 1339, 1625
AclI AACGTT 1 cut(s) 1240
AclWI GGATC 5 cut(s) 803, 957, 1021, 1148, 1731
AcoI YGGCCR 3 cut(s) 210, 1336, 1563
AcsI RAATTY 2 cut(s) 91, 678
AcuI CTGAAG 3 cut(s) 471, 498, 1292
AdeI CACNNNGTG 1 cut(s) 1102
AfaI GTAC 3 cut(s) 1057, 1669, 1691
AfeI AGCGCT 1 cut(s) 1547
AgsI TTSAA 3 cut(s) 89, 671, 767
AjnI CCWGG 6 cut(s) 131, 435, 538, 1215, 1259, 1710
AloI GAACNNNNNNTCC 2 cut(s) 1715, 1747
AluBI AGCT 7 cut(s) 817, 1163, 1231, 1306, 1456, 1468, 1587
AluI AGCT 7 cut(s) 817, 1163, 1231, 1306, 1456, 1468, 1587
Alw26I GTCTC 9 cut(s) 56, 210, 387, 496, 529, 581, 923, 975, 1581
AlwI GGATC 5 cut(s) 803, 957, 1021, 1148, 1731
Ama87I CYCGRG 6 cut(s) 140, 384, 532, 785, 1158, 1578
Aor51HI AGCGCT 1 cut(s) 1547
AoxI GGCC 9 cut(s) 210, 541, 1045, 1270, 1296, 1336, 1563, 1581, 1653
ApaI GGGCCC 1 cut(s) 1300
ApeKI GCWGC 5 cut(s) 230, 263, 524, 555, 1465
ApoI RAATTY 2 cut(s) 91, 678
Asp700I GAANNNNTTC 2 cut(s) 291, 780
AspLEI GCGC 3 cut(s) 734, 1548, 1621
AspS9I GGNCC 5 cut(s) 999, 1270, 1296, 1297, 1581
AsuC2I CCSGG 2 cut(s) 885, 932
AsuHPI GGTGA 5 cut(s) 854, 952, 1076, 1115, 1639
AsuNHI GCTAGC 1 cut(s) 233
AvaI CYCGRG 6 cut(s) 140, 384, 532, 785, 1158, 1578
AvaII GGWCC 1 cut(s) 999
AxyI CCTNAGG 1 cut(s) 598
BaeGI GKGCMC 5 cut(s) 460, 564, 880, 1300, 1747
BanI GGYRCC 2 cut(s) 457, 1742
BanII GRGCYC 2 cut(s) 629, 1300
BauI CACGAG 2 cut(s) 158, 1003
BbsI GAAGAC 2 cut(s) 1374, 1421
BbvCI CCTCAGC 2 cut(s) 813, 861
BbvI GCAGC 5 cut(s) 217, 250, 536, 567, 1477
BccI CCATC 4 cut(s) 888, 974, 1076, 1658
BceAI ACGGC 1 cut(s) 1664
BcgI CGANNNNNNTGC 4 cut(s) 365, 399, 513, 547
BciT130I CCWGG 6 cut(s) 133, 437, 540, 1217, 1261, 1712
BclI TGATCA 2 cut(s) 1129, 1441
BcnI CCSGG 2 cut(s) 885, 932
BcoDI GTCTC 9 cut(s) 56, 210, 387, 496, 529, 581, 923, 975, 1581
BfaI CTAG 4 cut(s) 234, 818, 1469, 1753
BfoI RGCGCY 1 cut(s) 1549
BfuAI ACCTGC 1 cut(s) 643
BglII AGATCT 1 cut(s) 1108
BisI GCNGC 6 cut(s) 231, 264, 525, 556, 1339, 1466
BlsI GCNGC 6 cut(s) 232, 265, 526, 557, 1340, 1467
BmcAI AGTACT 1 cut(s) 1691
Bme1390I CCNGG 8 cut(s) 133, 437, 540, 885, 932, 1217, 1261, 1712
Bme18I GGWCC 1 cut(s) 999
BmeT110I CYCGRG 6 cut(s) 140, 384, 532, 785, 1158, 1578
BmgT120I GGNCC 5 cut(s) 999, 1270, 1296, 1297, 1581
BmiI GGNNCC 6 cut(s) 404, 459, 628, 1271, 1298, 1744
BmrFI CCNGG 8 cut(s) 133, 437, 540, 885, 932, 1217, 1261, 1712
BmtI GCTAGC 1 cut(s) 237
BpiI GAAGAC 2 cut(s) 1374, 1421
BpmI CTGGAG 4 cut(s) 440, 825, 1062, 1478
Bpu10I CCTNAGC 4 cut(s) 813, 861, 1179, 1265
BpuEI CTTGAG 1 cut(s) 1631
BpuMI CCSGG 2 cut(s) 885, 932
Bsa29I ATCGAT 1 cut(s) 1362
BsaI GGTCTC 3 cut(s) 529, 975, 1581
BsaJI CCNNGG 3 cut(s) 141, 930, 1566
BsaXI ACNNNNNCTCC 4 cut(s) 1385, 1415, 1535, 1565
Bse1I ACTGG 4 cut(s) 357, 745, 825, 1041
Bse21I CCTNAGG 1 cut(s) 598
Bse3DI GCAATG 1 cut(s) 1371
BseBI CCWGG 6 cut(s) 133, 437, 540, 1217, 1261, 1712
BseCI ATCGAT 1 cut(s) 1362
BseDI CCNNGG 3 cut(s) 141, 930, 1566
BseGI GGATG 6 cut(s) 136, 451, 659, 709, 880, 1669
BseMI GCAATG 1 cut(s) 1371
BseNI ACTGG 4 cut(s) 357, 745, 825, 1041
BseRI GAGGAG 4 cut(s) 158, 161, 1393, 1583
BseSI GKGCMC 5 cut(s) 460, 564, 880, 1300, 1747
BseXI GCAGC 5 cut(s) 217, 250, 536, 567, 1477
BseYI CCCAGC 1 cut(s) 1163
BsgI GTGCAG 2 cut(s) 99, 1079
Bsh1236I CGCG 3 cut(s) 297, 576, 734
Bsh1285I CGRYCG 1 cut(s) 1362
BshFI GGCC 9 cut(s) 212, 543, 1047, 1272, 1298, 1338, 1565, 1583, 1655
BshNI GGYRCC 2 cut(s) 457, 1742
BshVI ATCGAT 1 cut(s) 1362
BsiEI CGRYCG 1 cut(s) 1362
BsiHKCI CYCGRG 6 cut(s) 140, 384, 532, 785, 1158, 1578
BsiSI CCGG 3 cut(s) 209, 884, 932
BslFI GGGAC 1 cut(s) 912
BsmAI GTCTC 9 cut(s) 56, 210, 387, 496, 529, 581, 923, 975, 1581
BsmBI CGTCTC 1 cut(s) 923
BsmFI GGGAC 1 cut(s) 912
BsnI GGCC 9 cut(s) 212, 543, 1047, 1272, 1298, 1338, 1565, 1583, 1655
Bso31I GGTCTC 3 cut(s) 529, 975, 1581
BsoBI CYCGRG 6 cut(s) 140, 384, 532, 785, 1158, 1578
Bsp120I GGGCCC 1 cut(s) 1296
Bsp1286I GDGCHC 6 cut(s) 460, 564, 629, 880, 1300, 1747
Bsp68I TCGCGA 1 cut(s) 297
BspACI CCGC 6 cut(s) 106, 576, 623, 712, 1339, 1625
BspANI GGCC 9 cut(s) 212, 543, 1047, 1272, 1298, 1338, 1565, 1583, 1655
BspDI ATCGAT 1 cut(s) 1362
BspFNI CGCG 3 cut(s) 297, 576, 734
BspHI TCATGA 1 cut(s) 1027
BspLI GGNNCC 6 cut(s) 404, 459, 628, 1271, 1298, 1744
BspMI ACCTGC 1 cut(s) 643
BspOI GCTAGC 1 cut(s) 237
BspPI GGATC 5 cut(s) 803, 957, 1021, 1148, 1731
BspT107I GGYRCC 2 cut(s) 457, 1742
BspTNI GGTCTC 3 cut(s) 529, 975, 1581
BsrBI CCGCTC 1 cut(s) 712
BsrDI GCAATG 1 cut(s) 1371
BsrI ACTGG 4 cut(s) 357, 745, 825, 1041
BssECI CCNNGG 3 cut(s) 141, 930, 1566
BssSI CACGAG 2 cut(s) 158, 1003
Bst2BI CACGAG 2 cut(s) 158, 1003
Bst2UI CCWGG 6 cut(s) 133, 437, 540, 1217, 1261, 1712
Bst4CI ACNGT 3 cut(s) 988, 1102, 1127
Bst6I CTCTTC 1 cut(s) 890
BstAPI GCANNNNNTGC 1 cut(s) 875
BstC8I GCNNGC 9 cut(s) 235, 498, 560, 578, 625, 730, 1356, 1585, 1623
BstEII GGTNACC 1 cut(s) 1627
BstENI CCTNNNNNAGG 1 cut(s) 1264
BstF5I GGATG 6 cut(s) 136, 451, 659, 709, 880, 1669
BstFNI CGCG 3 cut(s) 297, 576, 734
BstH2I RGCGCY 1 cut(s) 1549
BstHHI GCGC 3 cut(s) 734, 1548, 1621
BstMAI GTCTC 9 cut(s) 56, 210, 387, 496, 529, 581, 923, 975, 1581
BstMCI CGRYCG 1 cut(s) 1362
BstMWI GCNNNNNNNGC 8 cut(s) 272, 455, 493, 582, 800, 866, 875, 1462
BstNI CCWGG 6 cut(s) 133, 437, 540, 1217, 1261, 1712
BstNSI RCATGY 1 cut(s) 334
BstPI GGTNACC 1 cut(s) 1627
BstSCI CCNGG 8 cut(s) 131, 435, 538, 883, 930, 1215, 1259, 1710
BstSLI GKGCMC 5 cut(s) 460, 564, 880, 1300, 1747
BstUI CGCG 3 cut(s) 297, 576, 734
BstV1I GCAGC 5 cut(s) 217, 250, 536, 567, 1477
BstV2I GAAGAC 2 cut(s) 1374, 1421
BstX2I RGATCY 5 cut(s) 808, 949, 1013, 1108, 1153
BstYI RGATCY 5 cut(s) 808, 949, 1013, 1108, 1153
Bsu15I ATCGAT 1 cut(s) 1362
Bsu36I CCTNAGG 1 cut(s) 598
BsuRI GGCC 9 cut(s) 212, 543, 1047, 1272, 1298, 1338, 1565, 1583, 1655
BsuTUI ATCGAT 1 cut(s) 1362
BtgZI GCGATG 1 cut(s) 1188
BtsCI GGATG 6 cut(s) 136, 451, 659, 709, 880, 1669
BtuMI TCGCGA 1 cut(s) 297
BveI ACCTGC 1 cut(s) 643
Cac8I GCNNGC 9 cut(s) 235, 498, 560, 578, 625, 730, 1356, 1585, 1623
CciI TCATGA 1 cut(s) 1027
CfoI GCGC 3 cut(s) 734, 1548, 1621
Cfr13I GGNCC 5 cut(s) 999, 1270, 1296, 1297, 1581
ClaI ATCGAT 1 cut(s) 1362
CseI GACGC 3 cut(s) 516, 582, 809
Csp6I GTAC 3 cut(s) 1056, 1668, 1690
CviAII CATG 5 cut(s) 331, 521, 632, 946, 1028
CviQI GTAC 3 cut(s) 1056, 1668, 1690
DraIII CACNNNGTG 1 cut(s) 1102
EaeI YGGCCR 3 cut(s) 210, 1336, 1563
Eam1104I CTCTTC 1 cut(s) 890
EarI CTCTTC 1 cut(s) 890
Eco147I AGGCCT 1 cut(s) 1047
Eco24I GRGCYC 2 cut(s) 629, 1300
Eco31I GGTCTC 3 cut(s) 529, 975, 1581
Eco47I GGWCC 1 cut(s) 999
Eco47III AGCGCT 1 cut(s) 1547
Eco57I CTGAAG 3 cut(s) 471, 498, 1292
Eco81I CCTNAGG 1 cut(s) 598
Eco88I CYCGRG 6 cut(s) 140, 384, 532, 785, 1158, 1578
Eco91I GGTNACC 1 cut(s) 1627
EcoNI CCTNNNNNAGG 1 cut(s) 1264
EcoO109I RGGNCCY 1 cut(s) 1296
EcoO65I GGTNACC 1 cut(s) 1627
EcoRII CCWGG 6 cut(s) 131, 435, 538, 1215, 1259, 1710
EcoT38I GRGCYC 2 cut(s) 629, 1300
Esp3I CGTCTC 1 cut(s) 923
FaeI CATG 5 cut(s) 334, 524, 635, 949, 1031
FalI AAGNNNNNCTT 1 cut(s) 1731
FaqI GGGAC 1 cut(s) 912
FatI CATG 5 cut(s) 330, 520, 631, 945, 1027
FauI CCCGC 3 cut(s) 99, 569, 616
FbaI TGATCA 2 cut(s) 1129, 1441
Fnu4HI GCNGC 6 cut(s) 231, 264, 525, 556, 1339, 1466
FokI GGATG 6 cut(s) 123, 458, 646, 716, 867, 1676
FriOI GRGCYC 2 cut(s) 629, 1300
Fsp4HI GCNGC 6 cut(s) 231, 264, 525, 556, 1339, 1466
FspBI CTAG 4 cut(s) 234, 818, 1469, 1753
FspI TGCGCA 1 cut(s) 1620
GlaI GCGC 3 cut(s) 733, 1547, 1620
GluI GCNGC 6 cut(s) 231, 264, 525, 556, 1339, 1466
GsaI CCCAGC 1 cut(s) 1167
GsuI CTGGAG 4 cut(s) 440, 825, 1062, 1478
HaeII RGCGCY 1 cut(s) 1549
HaeIII GGCC 9 cut(s) 212, 543, 1047, 1272, 1298, 1338, 1565, 1583, 1655
HapII CCGG 3 cut(s) 209, 884, 932
HgaI GACGC 3 cut(s) 516, 582, 809
HhaI GCGC 3 cut(s) 734, 1548, 1621
Hin1II CATG 5 cut(s) 334, 524, 635, 949, 1031
Hin6I GCGC 3 cut(s) 732, 1546, 1619
HinP1I GCGC 3 cut(s) 732, 1546, 1619
HinfI GANTC 8 cut(s) 154, 223, 292, 299, 353, 508, 925, 1417
HpaII CCGG 3 cut(s) 209, 884, 932
HphI GGTGA 5 cut(s) 854, 952, 1076, 1115, 1639
Hpy166II GTNNAC 2 cut(s) 349, 1002
Hpy188I TCNGA 2 cut(s) 304, 1108
Hpy8I GTNNAC 2 cut(s) 349, 1002
Hpy99I CGWCG 1 cut(s) 1685
HpyAV CCTTC 8 cut(s) 110, 337, 446, 522, 770, 1549, 1645, 1717
HpyCH4III ACNGT 3 cut(s) 988, 1102, 1127
HpyCH4IV ACGT 3 cut(s) 255, 636, 1240
HpyF10VI GCNNNNNNNGC 8 cut(s) 272, 455, 493, 582, 800, 866, 875, 1462
HpySE526I ACGT 3 cut(s) 255, 636, 1240
Hsp92II CATG 5 cut(s) 334, 524, 635, 949, 1031
HspAI GCGC 3 cut(s) 732, 1546, 1619
Ksp22I TGATCA 2 cut(s) 1129, 1441
LmnI GCTCC 3 cut(s) 632, 1393, 1543
Lsp1109I GCAGC 5 cut(s) 217, 250, 536, 567, 1477
MaeI CTAG 4 cut(s) 234, 818, 1469, 1753
MaeII ACGT 3 cut(s) 255, 636, 1240
MaeIII GTNAC 3 cut(s) 1087, 1507, 1627
MbiI CCGCTC 1 cut(s) 712
MboII GAAGA 4 cut(s) 764, 907, 1379, 1426
MflI RGATCY 5 cut(s) 808, 949, 1013, 1108, 1153
MhlI GDGCHC 6 cut(s) 460, 564, 629, 880, 1300, 1747
MluCI AATT 6 cut(s) 91, 287, 678, 692, 1068, 1210
MlyI GAGTC 3 cut(s) 517, 934, 1411
MmeI TCCRAC 6 cut(s) 171, 753, 1215, 1258, 1371, 1521
MroXI GAANNNNTTC 2 cut(s) 291, 780
MseI TTAA 5 cut(s) 327, 429, 686, 954, 1143
MslI CAYNNNNRTG 3 cut(s) 10, 329, 1026
MspI CCGG 3 cut(s) 209, 884, 932
MspR9I CCNGG 8 cut(s) 133, 437, 540, 885, 932, 1217, 1261, 1712
MvaI CCWGG 6 cut(s) 133, 437, 540, 1217, 1261, 1712
MvnI CGCG 3 cut(s) 297, 576, 734
MwoI GCNNNNNNNGC 8 cut(s) 272, 455, 493, 582, 800, 866, 875, 1462
NciI CCSGG 2 cut(s) 885, 932
NheI GCTAGC 1 cut(s) 233
NlaIII CATG 5 cut(s) 334, 524, 635, 949, 1031
NlaIV GGNNCC 6 cut(s) 404, 459, 628, 1271, 1298, 1744
NmeAIII GCCGAG 2 cut(s) 1298, 1591
NmuCI GTSAC 1 cut(s) 1627
NruI TCGCGA 1 cut(s) 297
NsbI TGCGCA 1 cut(s) 1620
NspI RCATGY 1 cut(s) 334
PaeR7I CTCGAG 4 cut(s) 384, 532, 785, 1158
PagI TCATGA 1 cut(s) 1027
PceI AGGCCT 1 cut(s) 1047
PcsI WCGNNNNNNNCGW 1 cut(s) 1001
PdmI GAANNNNTTC 2 cut(s) 291, 780
PfeI GAWTC 5 cut(s) 154, 223, 292, 299, 353
PflFI GACNNNGTC 2 cut(s) 507, 592
PflMI CCANNNNNTGG 1 cut(s) 442
PfoI TCCNGGA 1 cut(s) 883
PkrI GCNGC 6 cut(s) 232, 265, 526, 557, 1340, 1467
Ple19I CGATCG 1 cut(s) 1362
PleI GAGTC 3 cut(s) 516, 933, 1411
PpsI GAGTC 3 cut(s) 516, 933, 1411
Psp1406I AACGTT 1 cut(s) 1240
Psp6I CCWGG 6 cut(s) 131, 435, 538, 1215, 1259, 1710
PspEI GGTNACC 1 cut(s) 1627
PspFI CCCAGC 1 cut(s) 1163
PspGI CCWGG 6 cut(s) 131, 435, 538, 1215, 1259, 1710
PspN4I GGNNCC 6 cut(s) 404, 459, 628, 1271, 1298, 1744
PspOMI GGGCCC 1 cut(s) 1296
PspPI GGNCC 5 cut(s) 999, 1270, 1296, 1297, 1581
PspXI VCTCGAGB 1 cut(s) 1158
PsrI GAACNNNNNNTAC 2 cut(s) 386, 418
PsuI RGATCY 5 cut(s) 808, 949, 1013, 1108, 1153
PsyI GACNNNGTC 2 cut(s) 507, 592
PvuI CGATCG 1 cut(s) 1362
RruI TCGCGA 1 cut(s) 297
RsaI GTAC 3 cut(s) 1057, 1669, 1691
RsaNI GTAC 3 cut(s) 1056, 1668, 1690
RseI CAYNNNNRTG 3 cut(s) 10, 329, 1026
SaqAI TTAA 5 cut(s) 327, 429, 686, 954, 1143
SatI GCNGC 6 cut(s) 231, 264, 525, 556, 1339, 1466
Sau96I GGNCC 5 cut(s) 999, 1270, 1296, 1297, 1581
ScaI AGTACT 1 cut(s) 1691
SchI GAGTC 3 cut(s) 517, 934, 1411
ScrFI CCNGG 8 cut(s) 133, 437, 540, 885, 932, 1217, 1261, 1712
SduI GDGCHC 6 cut(s) 460, 564, 629, 880, 1300, 1747
Sfr274I CTCGAG 4 cut(s) 384, 532, 785, 1158
SinI GGWCC 1 cut(s) 999
SlaI CTCGAG 4 cut(s) 384, 532, 785, 1158
SmiMI CAYNNNNRTG 3 cut(s) 10, 329, 1026
SmlI CTYRAG 5 cut(s) 384, 532, 785, 1158, 1646
SmoI CTYRAG 5 cut(s) 384, 532, 785, 1158, 1646
Sse9I AATT 6 cut(s) 91, 287, 678, 692, 1068, 1210
SseBI AGGCCT 1 cut(s) 1047
SsiI CCGC 6 cut(s) 106, 576, 623, 712, 1339, 1625
SspMI CTAG 4 cut(s) 234, 818, 1469, 1753
StuI AGGCCT 1 cut(s) 1047
StyD4I CCNGG 8 cut(s) 131, 435, 538, 883, 930, 1215, 1259, 1710
TaaI ACNGT 3 cut(s) 988, 1102, 1127
TaiI ACGT 3 cut(s) 258, 639, 1243
TasI AATT 6 cut(s) 91, 287, 678, 692, 1068, 1210
TatI WGTACW 2 cut(s) 1055, 1689
TauI GCSGC 1 cut(s) 1341
TfiI GAWTC 5 cut(s) 154, 223, 292, 299, 353
Tru1I TTAA 5 cut(s) 327, 429, 686, 954, 1143
Tru9I TTAA 5 cut(s) 327, 429, 686, 954, 1143
TseFI GTSAC 1 cut(s) 1627
TseI GCWGC 5 cut(s) 230, 263, 524, 555, 1465
Tsp45I GTSAC 1 cut(s) 1627
TspDTI ATGAA 4 cut(s) 648, 1047, 1223, 1380
Tth111I GACNNNGTC 2 cut(s) 507, 592
Van91I CCANNNNNTGG 1 cut(s) 442
VpaK11BI GGWCC 1 cut(s) 999
XagI CCTNNNNNAGG 1 cut(s) 1264
XapI RAATTY 2 cut(s) 91, 678
XceI RCATGY 1 cut(s) 334
XhoI CTCGAG 4 cut(s) 384, 532, 785, 1158
XmnI GAANNNNTTC 2 cut(s) 291, 780
XspI CTAG 4 cut(s) 234, 818, 1469, 1753
ZrmI AGTACT 1 cut(s) 1691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.