Rmu_sc0006518.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006518.1
OG0000075
Physical Location & Seq
Forward (+)
13773 .. 17057
3285 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006518.1_g000003.1.cds

Sequence Viewer

Length: 1683 bp
atggaggaggctcgttgtcaagaagccgaaggtactatcactctgctgcaggaagctaacttggaactgacaaggaagctacaacaggcggaggatggtctgtgggagttggagagacaagtacgggagcgggataccgaggtggagcatcgcgctgttgctctggagagcctggctccattttccaatcgcgtggtggagttggagggacaagttgatacactgtggagggaggttgaccgattgcaagatgtggagctcaagccaggcgagagggaggctgctactgagactcatcccgacaaacttcacaaggtgaggcgagatggtgcggaaaaggagatggatctctatctccggtcaacctactttcaagagaagatgaacaaagccttctcagatggagccttgcactcgattctagatggtattgccgtgggttggattgaccaggagaagatgatgcgggatatgcaggccaagaaggcaacgaggtcacaaggcagccttgcaagtggtggttgtggtgctgggatcgtgacccgggagcaggcagtgacgaagcgtgtatcgggccaagctggctatcgcgagttggggggtgctactggcgaactggaggcccacgtggatatcgagggtgaggtgcaaggtgaaaatgttagagagtcattaatgcgctgctgcaattggtcgtccggagacggttggtggtggtggcctttccctataaataggcagggtcatgagcgatttcgcattgactttgtaaagcacataggccataagttgggattgctatgcgtgcccttgcctgttgcgtgctatgttagacatcgtaaggcctatggcgataacgacaggagaaatgtgaccggtaagatcatgacattcaatactgcgcgaaggcagttgcaagaaacattggactatgaaagggtagtagcggaggtgcttggcattccatggatgtgggagggtgataccatctgcttccctcaggtggaaggtagtgggtctaatggcctcgatgatttcgtatggcccttcctaggtggctttgtgtctcgttggggttggcatcttctccttcatcacccagtccccgacggagaggaggcgaggcatgactctgaagttatagtaaggagcgatacgctatttgttattgatattcttgagatgggctcacttgcggtgctcttccaagaggtcagagtcgaggttcaaccctttcaagttggtgagtgggtcgaagcatgcgacccactcgctatgcacgtcctactcgacagggatcacgacctcgcccttggcatcgtcgagccttttcttcaaattctgcttgattatcttgttgacatcttcgacttggccattcgtctgtgggtggcatgtcggatctacataccttactggccaacgaagtccctgagcgtatcgttatcaaattgggcaccgttatcggtgatgattgtctcaggggttccgaatcggcagtatatattcttctacagaaagttaatgaccttggtaactgtcatcgtggctaaagcctcggcctcgaccagtgttgtaatccaccgcgacaatggcgaatttgaactgtcccggtgctgtgaggaatttgccgatgaagtccagaccccactggcagtatgcccaaggggcgatgataattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

560

Amino Acids

63.68

Weight (kDa)

5.05

Isoelectric Point (pI)

36.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1456
AccB7I CCANNNNNTGG 1 cut(s) 790
AccBSI CCGCTC 1 cut(s) 130
AccII CGCG 5 cut(s) 153, 192, 591, 904, 1587
AccIII TCCGGA 1 cut(s) 698
AciI CCGC 7 cut(s) 89, 130, 332, 466, 947, 1196, 1585
AclWI GGATC 4 cut(s) 354, 542, 1305, 1409
AcoI YGGCCR 2 cut(s) 1374, 1418
AcsI RAATTY 3 cut(s) 1338, 1598, 1625
AcuI CTGAAG 1 cut(s) 1155
AcvI CACGTG 1 cut(s) 628
AdeI CACNNNGTG 1 cut(s) 316
AfaI GTAC 2 cut(s) 34, 123
AfiI CCNNNNNNNGG 5 cut(s) 441, 550, 790, 1003, 1052
AgeI ACCGGT 1 cut(s) 875
AgsI TTSAA 6 cut(s) 374, 895, 1229, 1238, 1337, 1604
AjiI CACGTC 1 cut(s) 1282
AjnI CCWGG 3 cut(s) 171, 265, 450
AluBI AGCT 4 cut(s) 56, 79, 259, 581
AluI AGCT 4 cut(s) 56, 79, 259, 581
Alw21I GWGCWC 2 cut(s) 261, 1203
Alw26I GTCTC 5 cut(s) 109, 284, 696, 1071, 1483
AlwI GGATC 4 cut(s) 354, 542, 1305, 1409
Ama87I CYCGRG 1 cut(s) 543
Aor13HI TCCGGA 1 cut(s) 698
ApeKI GCWGC 5 cut(s) 46, 281, 504, 681, 684
ApoI RAATTY 3 cut(s) 1338, 1598, 1625
AseI ATTAAT 1 cut(s) 674
AsiGI ACCGGT 1 cut(s) 875
AspA2I CCTAGG 1 cut(s) 1051
AspLEI GCGC 3 cut(s) 155, 681, 904
AspS9I GGNCC 3 cut(s) 574, 622, 1044
AsuC2I CCSGG 3 cut(s) 544, 545, 1612
AsuHPI GGTGA 7 cut(s) 328, 653, 665, 992, 1088, 1256, 1480
AvaI CYCGRG 1 cut(s) 543
AvrII CCTAGG 1 cut(s) 1051
AxyI CCTNAGG 1 cut(s) 999
BaeGI GKGCMC 2 cut(s) 810, 1459
BaeI ACNNNNGTAYC 2 cut(s) 126, 159
BalI TGGCCA 2 cut(s) 1376, 1420
BanI GGYRCC 1 cut(s) 1456
BanII GRGCYC 2 cut(s) 261, 1190
BarI GAAGNNNNNNTAC 2 cut(s) 1493, 1525
BbrPI CACGTG 1 cut(s) 628
Bbv12I GWGCWC 2 cut(s) 261, 1203
BbvI GCAGC 5 cut(s) 33, 268, 516, 668, 671
BccI CCATC 7 cut(s) 89, 320, 337, 395, 419, 995, 1177
BceAI ACGGC 1 cut(s) 419
BcgI CGANNNNNNTGC 2 cut(s) 1446, 1480
BciT130I CCWGG 3 cut(s) 173, 267, 452
BciVI GTATCC 1 cut(s) 127
BcnI CCSGG 3 cut(s) 544, 545, 1612
BcoDI GTCTC 5 cut(s) 109, 284, 696, 1071, 1483
BfaI CTAG 2 cut(s) 422, 1052
BfmI CTRYAG 2 cut(s) 47, 1513
BfuI GTATCC 1 cut(s) 127
BglI GCCNNNNNGGC 3 cut(s) 485, 582, 1668
BisI GCNGC 5 cut(s) 47, 282, 505, 682, 685
BlnI CCTAGG 1 cut(s) 1051
BlsI GCNGC 5 cut(s) 48, 283, 506, 683, 686
Bme1390I CCNGG 6 cut(s) 173, 267, 452, 544, 545, 1612
BmeT110I CYCGRG 1 cut(s) 543
BmgBI CACGTC 1 cut(s) 1282
BmgT120I GGNCC 3 cut(s) 574, 622, 1044
BmiI GGNNCC 4 cut(s) 177, 406, 1458, 1488
BmrFI CCNGG 6 cut(s) 173, 267, 452, 544, 545, 1612
BmrI ACTGGG 1 cut(s) 1094
BmsI GCATC 4 cut(s) 157, 453, 1090, 1326
BmuI ACTGGG 1 cut(s) 1094
BplI GAGNNNNNCTC 4 cut(s) 160, 192, 1172, 1204
BpmI CTGGAG 2 cut(s) 185, 638
Bpu10I CCTNAGC 1 cut(s) 1433
BpuEI CTTGAG 2 cut(s) 245, 1199
BpuMI CCSGG 3 cut(s) 544, 545, 1612
BsaAI YACGTR 1 cut(s) 628
BsaBI GATNNNNATC 1 cut(s) 351
BsaJI CCNNGG 9 cut(s) 138, 435, 543, 965, 1051, 1312, 1530, 1557, 1664
BsaWI WCCGGW 3 cut(s) 357, 698, 875
Bsc4I CCNNNNNNNGG 5 cut(s) 441, 550, 790, 1003, 1052
Bse118I RCCGGY 1 cut(s) 875
Bse1I ACTGG 6 cut(s) 613, 621, 1100, 1421, 1569, 1656
Bse21I CCTNAGG 1 cut(s) 999
Bse8I GATNNNNATC 1 cut(s) 351
BseAI TCCGGA 1 cut(s) 698
BseBI CCWGG 3 cut(s) 173, 267, 452
BseDI CCNNGG 9 cut(s) 138, 435, 543, 965, 1051, 1312, 1530, 1557, 1664
BseGI GGATG 3 cut(s) 100, 295, 975
BseJI GATNNNNATC 1 cut(s) 351
BseLI CCNNNNNNNGG 5 cut(s) 441, 550, 790, 1003, 1052
BseMII CTCAG 5 cut(s) 279, 411, 1013, 1424, 1494
BseNI ACTGG 6 cut(s) 613, 621, 1100, 1421, 1569, 1656
BseRI GAGGAG 2 cut(s) 20, 1130
BseSI GKGCMC 2 cut(s) 810, 1459
BseXI GCAGC 5 cut(s) 33, 268, 516, 668, 671
BseYI CCCAGC 1 cut(s) 530
Bsh1236I CGCG 5 cut(s) 153, 192, 591, 904, 1587
BshNI GGYRCC 1 cut(s) 1456
BshTI ACCGGT 1 cut(s) 875
BsiHKAI GWGCWC 2 cut(s) 261, 1203
BsiHKCI CYCGRG 1 cut(s) 543
BsiSI CCGG 5 cut(s) 358, 544, 699, 876, 1612
BslFI GGGAC 4 cut(s) 222, 1088, 1414, 1594
BslI CCNNNNNNNGG 5 cut(s) 441, 550, 790, 1003, 1052
BsmAI GTCTC 5 cut(s) 109, 284, 696, 1071, 1483
BsmBI CGTCTC 1 cut(s) 696
BsmFI GGGAC 4 cut(s) 222, 1088, 1414, 1594
BsmI GAATGC 1 cut(s) 960
BsoBI CYCGRG 1 cut(s) 543
Bsp1286I GDGCHC 5 cut(s) 261, 810, 1190, 1203, 1459
Bsp13I TCCGGA 1 cut(s) 698
Bsp143I GATC 5 cut(s) 346, 534, 882, 1297, 1401
Bsp19I CCATGG 1 cut(s) 965
Bsp68I TCGCGA 1 cut(s) 591
BspACI CCGC 7 cut(s) 89, 130, 332, 466, 947, 1196, 1585
BspCNI CTCAG 5 cut(s) 280, 410, 1012, 1425, 1493
BspEI TCCGGA 1 cut(s) 698
BspFNI CGCG 5 cut(s) 153, 192, 591, 904, 1587
BspHI TCATGA 2 cut(s) 745, 885
BspLI GGNNCC 4 cut(s) 177, 406, 1458, 1488
BspMAI CTGCAG 1 cut(s) 51
BspPI GGATC 4 cut(s) 354, 542, 1305, 1409
BspQI GCTCTTC 1 cut(s) 1208
BspT107I GGYRCC 1 cut(s) 1456
BsrBI CCGCTC 1 cut(s) 130
BsrFI RCCGGY 1 cut(s) 875
BsrI ACTGG 6 cut(s) 613, 621, 1100, 1421, 1569, 1656
BssAI RCCGGY 1 cut(s) 875
BssECI CCNNGG 9 cut(s) 138, 435, 543, 965, 1051, 1312, 1530, 1557, 1664
BssMI GATC 5 cut(s) 346, 534, 882, 1297, 1401
BssT1I CCWWGG 5 cut(s) 965, 1051, 1312, 1530, 1664
Bst2UI CCWGG 3 cut(s) 173, 267, 452
Bst4CI ACNGT 5 cut(s) 225, 707, 1461, 1540, 1608
Bst6I CTCTTC 1 cut(s) 1208
BstBAI YACGTR 1 cut(s) 628
BstC8I GCNNGC 6 cut(s) 477, 552, 583, 806, 823, 1261
BstDEI CTNAG 5 cut(s) 288, 397, 999, 1433, 1480
BstDSI CCRYGG 2 cut(s) 435, 965
BstF5I GGATG 3 cut(s) 100, 295, 975
BstFNI CGCG 5 cut(s) 153, 192, 591, 904, 1587
BstHHI GCGC 3 cut(s) 155, 681, 904
BstKTI GATC 5 cut(s) 349, 537, 885, 1300, 1404
BstMAI GTCTC 5 cut(s) 109, 284, 696, 1071, 1483
BstMBI GATC 5 cut(s) 346, 534, 882, 1297, 1401
BstMWI GCNNNNNNNGC 6 cut(s) 472, 485, 582, 805, 1593, 1668
BstNI CCWGG 3 cut(s) 173, 267, 452
BstNSI RCATGY 2 cut(s) 1263, 1398
BstSCI CCNGG 6 cut(s) 171, 265, 450, 542, 543, 1610
BstSFI CTRYAG 2 cut(s) 47, 1513
BstSLI GKGCMC 2 cut(s) 810, 1459
BstUI CGCG 5 cut(s) 153, 192, 591, 904, 1587
BstV1I GCAGC 5 cut(s) 33, 268, 516, 668, 671
BstX2I RGATCY 2 cut(s) 346, 1401
BstXI CCANNNNNNTGG 2 cut(s) 193, 972
BstYI RGATCY 2 cut(s) 346, 1401
Bsu36I CCTNAGG 1 cut(s) 999
BsuI GTATCC 1 cut(s) 127
BtgI CCRYGG 2 cut(s) 435, 965
BtgZI GCGATG 1 cut(s) 134
BtrI CACGTC 1 cut(s) 1282
BtsCI GGATG 3 cut(s) 100, 295, 975
BtsI GCAGTG 1 cut(s) 561
BtsIMutI CAGTG 4 cut(s) 221, 561, 1576, 1649
BtuMI TCGCGA 1 cut(s) 591
Cac8I GCNNGC 6 cut(s) 477, 552, 583, 806, 823, 1261
CciI TCATGA 2 cut(s) 745, 885
CfoI GCGC 3 cut(s) 155, 681, 904
Cfr10I RCCGGY 1 cut(s) 875
Cfr13I GGNCC 3 cut(s) 574, 622, 1044
Cfr9I CCCGGG 1 cut(s) 543
Csp6I GTAC 2 cut(s) 33, 122
CspAI ACCGGT 1 cut(s) 875
CviAII CATG 6 cut(s) 746, 886, 966, 1127, 1260, 1395
CviQI GTAC 2 cut(s) 33, 122
DdeI CTNAG 5 cut(s) 288, 397, 999, 1433, 1480
DpnI GATC 5 cut(s) 348, 536, 884, 1299, 1403
DpnII GATC 5 cut(s) 346, 534, 882, 1297, 1401
DraIII CACNNNGTG 1 cut(s) 316
EaeI YGGCCR 2 cut(s) 1374, 1418
Eam1104I CTCTTC 1 cut(s) 1208
EarI CTCTTC 1 cut(s) 1208
EciI GGCGGA 1 cut(s) 104
Ecl136II GAGCTC 1 cut(s) 259
Eco130I CCWWGG 5 cut(s) 965, 1051, 1312, 1530, 1664
Eco147I AGGCCT 1 cut(s) 845
Eco24I GRGCYC 2 cut(s) 261, 1190
Eco32I GATATC 1 cut(s) 634
Eco53kI GAGCTC 1 cut(s) 259
Eco57I CTGAAG 1 cut(s) 1155
Eco72I CACGTG 1 cut(s) 628
Eco81I CCTNAGG 1 cut(s) 999
Eco88I CYCGRG 1 cut(s) 543
EcoICRI GAGCTC 1 cut(s) 259
EcoRII CCWGG 3 cut(s) 171, 265, 450
EcoRV GATATC 1 cut(s) 634
EcoT14I CCWWGG 5 cut(s) 965, 1051, 1312, 1530, 1664
EcoT38I GRGCYC 2 cut(s) 261, 1190
ErhI CCWWGG 5 cut(s) 965, 1051, 1312, 1530, 1664
Esp3I CGTCTC 1 cut(s) 696
FaeI CATG 6 cut(s) 749, 889, 969, 1130, 1263, 1398
FalI AAGNNNNNCTT 2 cut(s) 492, 524
FaqI GGGAC 4 cut(s) 222, 1088, 1414, 1594
FatI CATG 6 cut(s) 745, 885, 965, 1126, 1259, 1394
FauI CCCGC 2 cut(s) 123, 459
Fnu4HI GCNGC 5 cut(s) 47, 282, 505, 682, 685
FokI GGATG 3 cut(s) 107, 282, 982
FriOI GRGCYC 2 cut(s) 261, 1190
Fsp4HI GCNGC 5 cut(s) 47, 282, 505, 682, 685
FspBI CTAG 2 cut(s) 422, 1052
GlaI GCGC 3 cut(s) 154, 680, 903
GluI GCNGC 5 cut(s) 47, 282, 505, 682, 685
GsaI CCCAGC 1 cut(s) 534
GsuI CTGGAG 2 cut(s) 185, 638
HapII CCGG 5 cut(s) 358, 544, 699, 876, 1612
HhaI GCGC 3 cut(s) 155, 681, 904
Hin1II CATG 6 cut(s) 749, 889, 969, 1130, 1263, 1398
Hin6I GCGC 3 cut(s) 153, 679, 902
HinP1I GCGC 3 cut(s) 153, 679, 902
HincII GTYRAC 3 cut(s) 238, 363, 1360
HindII GTYRAC 3 cut(s) 238, 363, 1360
HinfI GANTC 6 cut(s) 292, 418, 668, 1130, 1218, 1492
HpaII CCGG 5 cut(s) 358, 544, 699, 876, 1612
HphI GGTGA 7 cut(s) 328, 653, 665, 992, 1088, 1256, 1480
Hpy166II GTNNAC 3 cut(s) 238, 363, 1360
Hpy188I TCNGA 5 cut(s) 400, 1135, 1217, 1401, 1491
Hpy8I GTNNAC 3 cut(s) 238, 363, 1360
Hpy99I CGWCG 2 cut(s) 1112, 1325
HpyAV CCTTC 7 cut(s) 23, 403, 478, 900, 1001, 1057, 1100
HpyCH4III ACNGT 5 cut(s) 225, 707, 1461, 1540, 1608
HpyCH4IV ACGT 2 cut(s) 627, 1281
HpyCH4V TGCA 9 cut(s) 49, 247, 412, 475, 512, 649, 687, 916, 1279
HpyF10VI GCNNNNNNNGC 6 cut(s) 472, 485, 582, 805, 1593, 1668
HpyF3I CTNAG 5 cut(s) 288, 397, 999, 1433, 1480
HpySE526I ACGT 2 cut(s) 627, 1281
Hsp92II CATG 6 cut(s) 749, 889, 969, 1130, 1263, 1398
HspAI GCGC 3 cut(s) 153, 679, 902
Kpn2I TCCGGA 1 cut(s) 698
Kzo9I GATC 5 cut(s) 346, 534, 882, 1297, 1401
LguI GCTCTTC 1 cut(s) 1208
LmnI GCTCC 7 cut(s) 127, 145, 181, 256, 404, 547, 1149
Lsp1109I GCAGC 5 cut(s) 33, 268, 516, 668, 671
LweI GCATC 4 cut(s) 157, 453, 1090, 1326
MaeI CTAG 2 cut(s) 422, 1052
MaeII ACGT 2 cut(s) 627, 1281
MaeIII GTNAC 5 cut(s) 495, 538, 556, 871, 1534
MalI GATC 5 cut(s) 348, 536, 884, 1299, 1403
MbiI CCGCTC 1 cut(s) 130
MboI GATC 5 cut(s) 346, 534, 882, 1297, 1401
MboII GAAGA 7 cut(s) 391, 469, 1076, 1195, 1325, 1357, 1501
MfeI CAATTG 1 cut(s) 688
MflI RGATCY 2 cut(s) 346, 1401
MhlI GDGCHC 5 cut(s) 261, 810, 1190, 1203, 1459
MlsI TGGCCA 2 cut(s) 1376, 1420
MluCI AATT 6 cut(s) 688, 1338, 1450, 1598, 1625, 1678
MluNI TGGCCA 2 cut(s) 1376, 1420
MlyI GAGTC 4 cut(s) 286, 677, 1124, 1227
MmeI TCCRAC 4 cut(s) 90, 183, 422, 1379
Mox20I TGGCCA 2 cut(s) 1376, 1420
MroI TCCGGA 1 cut(s) 698
MscI TGGCCA 2 cut(s) 1376, 1420
MseI TTAA 2 cut(s) 674, 1523
MslI CAYNNNNRTG 1 cut(s) 970
Msp20I TGGCCA 2 cut(s) 1376, 1420
MspI CCGG 5 cut(s) 358, 544, 699, 876, 1612
MspR9I CCNGG 6 cut(s) 173, 267, 452, 544, 545, 1612
MunI CAATTG 1 cut(s) 688
Mva1269I GAATGC 1 cut(s) 960
MvaI CCWGG 3 cut(s) 173, 267, 452
MvnI CGCG 5 cut(s) 153, 192, 591, 904, 1587
MwoI GCNNNNNNNGC 6 cut(s) 472, 485, 582, 805, 1593, 1668
NciI CCSGG 3 cut(s) 544, 545, 1612
NcoI CCATGG 1 cut(s) 965
NdeII GATC 5 cut(s) 346, 534, 882, 1297, 1401
NlaIII CATG 6 cut(s) 749, 889, 969, 1130, 1263, 1398
NlaIV GGNNCC 4 cut(s) 177, 406, 1458, 1488
NmeAIII GCCGAG 1 cut(s) 1538
NmuCI GTSAC 4 cut(s) 495, 538, 556, 871
NruI TCGCGA 1 cut(s) 591
NspI RCATGY 2 cut(s) 1263, 1398
PaeI GCATGC 1 cut(s) 1263
PagI TCATGA 2 cut(s) 745, 885
PceI AGGCCT 1 cut(s) 845
PciSI GCTCTTC 1 cut(s) 1208
PcsI WCGNNNNNNNCGW 5 cut(s) 633, 1035, 1260, 1278, 1287
PctI GAATGC 1 cut(s) 960
PfeI GAWTC 2 cut(s) 418, 1492
PflMI CCANNNNNTGG 1 cut(s) 790
PinAI ACCGGT 1 cut(s) 875
PkrI GCNGC 5 cut(s) 48, 283, 506, 683, 686
PleI GAGTC 4 cut(s) 286, 676, 1124, 1226
PmaCI CACGTG 1 cut(s) 628
PmlI CACGTG 1 cut(s) 628
PpsI GAGTC 4 cut(s) 286, 676, 1124, 1226
Ppu21I YACGTR 1 cut(s) 628
PshBI ATTAAT 1 cut(s) 674
Psp124BI GAGCTC 1 cut(s) 261
Psp6I CCWGG 3 cut(s) 171, 265, 450
PspCI CACGTG 1 cut(s) 628
PspFI CCCAGC 1 cut(s) 530
PspGI CCWGG 3 cut(s) 171, 265, 450
PspN4I GGNNCC 4 cut(s) 177, 406, 1458, 1488
PspPI GGNCC 3 cut(s) 574, 622, 1044
PstI CTGCAG 1 cut(s) 51
PsuI RGATCY 2 cut(s) 346, 1401
RruI TCGCGA 1 cut(s) 591
RsaI GTAC 2 cut(s) 34, 123
RsaNI GTAC 2 cut(s) 33, 122
RseI CAYNNNNRTG 1 cut(s) 970
SacI GAGCTC 1 cut(s) 261
SapI GCTCTTC 1 cut(s) 1208
SaqAI TTAA 2 cut(s) 674, 1523
SatI GCNGC 5 cut(s) 47, 282, 505, 682, 685
Sau3AI GATC 5 cut(s) 346, 534, 882, 1297, 1401
Sau96I GGNCC 3 cut(s) 574, 622, 1044
SchI GAGTC 4 cut(s) 286, 677, 1124, 1227
ScrFI CCNGG 6 cut(s) 173, 267, 452, 544, 545, 1612
SduI GDGCHC 5 cut(s) 261, 810, 1190, 1203, 1459
SfaNI GCATC 4 cut(s) 157, 453, 1090, 1326
SfcI CTRYAG 2 cut(s) 47, 1513
SmaI CCCGGG 1 cut(s) 545
SmiMI CAYNNNNRTG 1 cut(s) 970
SmlI CTYRAG 2 cut(s) 260, 1178
SmoI CTYRAG 2 cut(s) 260, 1178
SphI GCATGC 1 cut(s) 1263
Sse9I AATT 6 cut(s) 688, 1338, 1450, 1598, 1625, 1678
SseBI AGGCCT 1 cut(s) 845
SsiI CCGC 7 cut(s) 89, 130, 332, 466, 947, 1196, 1585
SspMI CTAG 2 cut(s) 422, 1052
SstI GAGCTC 1 cut(s) 261
StuI AGGCCT 1 cut(s) 845
StyD4I CCNGG 6 cut(s) 171, 265, 450, 542, 543, 1610
StyI CCWWGG 5 cut(s) 965, 1051, 1312, 1530, 1664
TaaI ACNGT 5 cut(s) 225, 707, 1461, 1540, 1608
TaiI ACGT 2 cut(s) 630, 1284
TaqI TCGA 9 cut(s) 416, 636, 1029, 1221, 1254, 1290, 1323, 1368, 1565
TaqII GACCGA 1 cut(s) 255
TasI AATT 6 cut(s) 688, 1338, 1450, 1598, 1625, 1678
TfiI GAWTC 2 cut(s) 418, 1492
Tru1I TTAA 2 cut(s) 674, 1523
Tru9I TTAA 2 cut(s) 674, 1523
TscAI CASTG 4 cut(s) 228, 561, 1576, 1656
TseFI GTSAC 4 cut(s) 495, 538, 556, 871
TseI GCWGC 5 cut(s) 46, 281, 504, 681, 684
Tsp45I GTSAC 4 cut(s) 495, 538, 556, 871
TspDTI ATGAA 4 cut(s) 398, 948, 1082, 1650
TspGWI ACGGA 1 cut(s) 1125
TspMI CCCGGG 1 cut(s) 543
TspRI CASTG 4 cut(s) 228, 561, 1576, 1656
Van91I CCANNNNNTGG 1 cut(s) 790
VspI ATTAAT 1 cut(s) 674
XapI RAATTY 3 cut(s) 1338, 1598, 1625
XbaI TCTAGA 1 cut(s) 421
XceI RCATGY 2 cut(s) 1263, 1398
XcmI CCANNNNNNNNNTGG 2 cut(s) 193, 1589
XmaI CCCGGG 1 cut(s) 543
XmaJI CCTAGG 1 cut(s) 1051
XspI CTAG 2 cut(s) 422, 1052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.