Rroxscaffold_7G00195710

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000075
Physical Location & Seq
Reverse (-)
38273931 .. 38275298
1368 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00195710.1

Sequence Viewer

Length: 900 bp
ATGCCCGAGCATCAACAAGTTCACTCAATGTTCAAGATGCATTACTCCACGAAGGGAGGCGATAGCGAGTGCATGAACTTCGGGGTCGCCGCCACCAAGAGTGATGCCCCTTATGCCGATGTGAATACCGACGCCATCATCGAAGAGTTATTGAAAGACTCGGAGGTGGTGAGGCATTGCAATGTGGACTTGGTTGATAAGAGGGTATACGAGATCGAGCGGTGGGTGAGCATACGGCTGCCCAATGACATATACCGGTGGTTTCCTGAGACCGTTTTGGAGTACTTGAACGGCAAGGCGGTGAGTGTGGAGGCTCGGGGAGTGTGGATGGTGGTGCCACCCGAGGATGGCGGGACTAGTCGGGGGGGTGCGGTCTCACTCTCGAGATGCGTGGCCGAGACGAGGCGGCATATACGGCTCGGTGGAGCGAGAGGGGCCGGTCCCCCCGGGTTCGGAGGGAAACGGTTCCGGTGGGGAAACCGTTGTTTGGCTCCGGTTTCCTTTTTGGGCTCAAACAAGCGTCCTGCCGATGTGCAAGTCGAGGGCGGGTCCCCCGTACACGTGTTGAGGGAGGTAAGCTGCGATATAGGGCGGGATGTAGGGGACAATGTGTGGCGGCGGGTCCTACCTTTGGAGGTGGATATCTTCGTAGAGGAGCTGTTTGAAGAAGTGGAATGCCGCCGCAGCGATACTAGTGCCGGGGACCGCTTGGTTGAAGATACCGTGTCTTTGGAGCAAATTGAGGGTGTTTTTTGGTGCCGATATCGAGGGCTTGGAGTCACCGAGAGGTTATCGCCGTTGACGGCGGGGAGGCGAAGTGATGATTCGGGTCGTGGATGTCGCAATGGAGGTTCCCGAGGTTGGTGGTGCTACACAAGGTCCCCGAGGTGGTGGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

299

Amino Acids

33.63

Weight (kDa)

6.62

Isoelectric Point (pI)

70.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 334, 756
AccBSI CCGCTC 1 cut(s) 220
AccI GTMKAC 1 cut(s) 207
AcoI YGGCCR 1 cut(s) 393
AcvI CACGTG 1 cut(s) 562
AcyI GRCGYC 1 cut(s) 132
AfaI GTAC 2 cut(s) 284, 558
AfiI CCNNNNNNNGG 7 cut(s) 347, 402, 452, 487, 631, 861, 888
AflIII ACRYGT 2 cut(s) 559, 561
AgeI ACCGGT 1 cut(s) 255
AgsI TTSAA 5 cut(s) 34, 154, 289, 665, 716
AhlI ACTAGT 2 cut(s) 356, 692
AluBI AGCT 2 cut(s) 579, 658
AluI AGCT 2 cut(s) 579, 658
Alw26I GTCTC 3 cut(s) 263, 379, 392
Ama87I CYCGRG 7 cut(s) 5, 315, 341, 382, 446, 855, 883
AoxI GGCC 2 cut(s) 393, 435
ApeKI GCWGC 3 cut(s) 238, 579, 684
AsiGI ACCGGT 1 cut(s) 255
Asp700I GAANNNNTTC 1 cut(s) 464
AspS9I GGNCC 6 cut(s) 435, 440, 549, 622, 703, 879
AsuC2I CCSGG 3 cut(s) 447, 448, 700
AsuHPI GGTGA 4 cut(s) 181, 238, 313, 772
AvaI CYCGRG 7 cut(s) 5, 315, 341, 382, 446, 855, 883
AvaII GGWCC 5 cut(s) 440, 549, 622, 703, 879
BanI GGYRCC 2 cut(s) 334, 756
BanII GRGCYC 1 cut(s) 512
BbrPI CACGTG 1 cut(s) 562
BbvI GCAGC 3 cut(s) 225, 566, 696
BccI CCATC 3 cut(s) 143, 322, 341
BceAI ACGGC 5 cut(s) 251, 307, 431, 781, 819
BcgI CGANNNNNNTGC 4 cut(s) 61, 95, 677, 711
BcnI CCSGG 3 cut(s) 447, 448, 700
BcoDI GTCTC 3 cut(s) 263, 379, 392
BcuI ACTAGT 2 cut(s) 356, 692
BfaI CTAG 2 cut(s) 357, 693
BisI GCNGC 8 cut(s) 90, 239, 407, 580, 617, 679, 682, 685
BlsI GCNGC 8 cut(s) 91, 240, 408, 581, 618, 680, 683, 686
BmcAI AGTACT 1 cut(s) 284
Bme1390I CCNGG 3 cut(s) 447, 448, 700
Bme18I GGWCC 5 cut(s) 440, 549, 622, 703, 879
BmeT110I CYCGRG 7 cut(s) 5, 315, 341, 382, 446, 855, 883
BmgT120I GGNCC 6 cut(s) 435, 440, 549, 622, 703, 879
BmrFI CCNGG 3 cut(s) 447, 448, 700
BmsI GCATC 4 cut(s) 19, 27, 94, 377
BpuMI CCSGG 3 cut(s) 447, 448, 700
BsaAI YACGTR 1 cut(s) 562
BsaHI GRCGYC 1 cut(s) 132
BsaI GGTCTC 2 cut(s) 263, 379
BsaJI CCNNGG 6 cut(s) 342, 445, 446, 699, 856, 884
BsaWI WCCGGW 3 cut(s) 255, 468, 493
BsaXI ACNNNNNCTCC 2 cut(s) 802, 832
Bsc4I CCNNNNNNNGG 7 cut(s) 347, 402, 452, 487, 631, 861, 888
Bse118I RCCGGY 2 cut(s) 255, 437
Bse3DI GCAATG 3 cut(s) 175, 187, 850
BseDI CCNNGG 6 cut(s) 342, 445, 446, 699, 856, 884
BseGI GGATG 4 cut(s) 333, 352, 601, 842
BseLI CCNNNNNNNGG 7 cut(s) 347, 402, 452, 487, 631, 861, 888
BseMI GCAATG 3 cut(s) 175, 187, 850
BseMII CTCAG 1 cut(s) 258
BseRI GAGGAG 1 cut(s) 668
BseXI GCAGC 3 cut(s) 225, 566, 696
BshFI GGCC 2 cut(s) 395, 437
BshNI GGYRCC 2 cut(s) 334, 756
BshTI ACCGGT 1 cut(s) 255
BsiHKCI CYCGRG 7 cut(s) 5, 315, 341, 382, 446, 855, 883
BsiSI CCGG 6 cut(s) 256, 438, 447, 469, 494, 699
BslFI GGGAC 6 cut(s) 367, 426, 535, 617, 716, 865
BslI CCNNNNNNNGG 7 cut(s) 347, 402, 452, 487, 631, 861, 888
BsmAI GTCTC 3 cut(s) 263, 379, 392
BsmBI CGTCTC 1 cut(s) 392
BsmFI GGGAC 6 cut(s) 367, 426, 535, 617, 716, 865
BsmI GAATGC 1 cut(s) 680
BsnI GGCC 2 cut(s) 395, 437
Bso31I GGTCTC 2 cut(s) 263, 379
BsoBI CYCGRG 7 cut(s) 5, 315, 341, 382, 446, 855, 883
Bsp1286I GDGCHC 1 cut(s) 512
Bsp143I GATC 1 cut(s) 213
BspANI GGCC 2 cut(s) 395, 437
BspCNI CTCAG 1 cut(s) 259
BspT107I GGYRCC 2 cut(s) 334, 756
BspTNI GGTCTC 2 cut(s) 263, 379
BsrBI CCGCTC 1 cut(s) 220
BsrDI GCAATG 3 cut(s) 175, 187, 850
BsrFI RCCGGY 2 cut(s) 255, 437
BssAI RCCGGY 2 cut(s) 255, 437
BssECI CCNNGG 6 cut(s) 342, 445, 446, 699, 856, 884
BssMI GATC 1 cut(s) 213
BssNAI GTATAC 1 cut(s) 208
BssNI GRCGYC 1 cut(s) 132
Bst1107I GTATAC 1 cut(s) 208
Bst4CI ACNGT 4 cut(s) 274, 465, 482, 724
Bst6I CTCTTC 1 cut(s) 138
BstACI GRCGYC 1 cut(s) 132
BstBAI YACGTR 1 cut(s) 562
BstDEI CTNAG 1 cut(s) 267
BstF5I GGATG 4 cut(s) 333, 352, 601, 842
BstKTI GATC 1 cut(s) 216
BstMAI GTCTC 3 cut(s) 263, 379, 392
BstMBI GATC 1 cut(s) 213
BstMWI GCNNNNNNNGC 4 cut(s) 113, 415, 434, 684
BstSCI CCNGG 3 cut(s) 445, 446, 698
BstV1I GCAGC 3 cut(s) 225, 566, 696
BstZ17I GTATAC 1 cut(s) 208
BsuRI GGCC 2 cut(s) 395, 437
BtsCI GGATG 4 cut(s) 333, 352, 601, 842
Cfr10I RCCGGY 2 cut(s) 255, 437
Cfr13I GGNCC 6 cut(s) 435, 440, 549, 622, 703, 879
Cfr9I CCCGGG 1 cut(s) 446
CseI GACGC 2 cut(s) 140, 509
Csp6I GTAC 2 cut(s) 283, 557
CspAI ACCGGT 1 cut(s) 255
CviAII CATG 1 cut(s) 73
CviQI GTAC 2 cut(s) 283, 557
DdeI CTNAG 1 cut(s) 267
DpnI GATC 1 cut(s) 215
DpnII GATC 1 cut(s) 213
EaeI YGGCCR 1 cut(s) 393
Eam1104I CTCTTC 1 cut(s) 138
EarI CTCTTC 1 cut(s) 138
Eco24I GRGCYC 1 cut(s) 512
Eco31I GGTCTC 2 cut(s) 263, 379
Eco32I GATATC 2 cut(s) 643, 764
Eco47I GGWCC 5 cut(s) 440, 549, 622, 703, 879
Eco72I CACGTG 1 cut(s) 562
Eco88I CYCGRG 7 cut(s) 5, 315, 341, 382, 446, 855, 883
EcoO109I RGGNCCY 3 cut(s) 549, 622, 879
EcoRV GATATC 2 cut(s) 643, 764
EcoT22I ATGCAT 1 cut(s) 42
EcoT38I GRGCYC 1 cut(s) 512
Esp3I CGTCTC 1 cut(s) 392
FaeI CATG 1 cut(s) 76
FaiI YATR 9 cut(s) 74, 114, 208, 233, 251, 253, 411, 413, 587
FaqI GGGAC 6 cut(s) 367, 426, 535, 617, 716, 865
FatI CATG 1 cut(s) 72
FauI CCCGC 5 cut(s) 344, 539, 585, 612, 799
FblI GTMKAC 1 cut(s) 207
Fnu4HI GCNGC 8 cut(s) 90, 239, 407, 580, 617, 679, 682, 685
FokI GGATG 4 cut(s) 340, 359, 608, 849
FriOI GRGCYC 1 cut(s) 512
Fsp4HI GCNGC 8 cut(s) 90, 239, 407, 580, 617, 679, 682, 685
FspBI CTAG 2 cut(s) 357, 693
GluI GCNGC 8 cut(s) 90, 239, 407, 580, 617, 679, 682, 685
HaeIII GGCC 2 cut(s) 395, 437
HapII CCGG 6 cut(s) 256, 438, 447, 469, 494, 699
HgaI GACGC 2 cut(s) 140, 509
Hin1I GRCGYC 1 cut(s) 132
Hin1II CATG 1 cut(s) 76
HincII GTYRAC 1 cut(s) 801
HindII GTYRAC 1 cut(s) 801
HinfI GANTC 3 cut(s) 158, 777, 824
HpaII CCGG 6 cut(s) 256, 438, 447, 469, 494, 699
HphI GGTGA 4 cut(s) 181, 238, 313, 772
Hpy166II GTNNAC 5 cut(s) 22, 187, 208, 559, 801
Hpy188I TCNGA 2 cut(s) 163, 455
Hpy188III TCNNGA 5 cut(s) 34, 266, 382, 384, 855
Hpy8I GTNNAC 5 cut(s) 22, 187, 208, 559, 801
Hpy99I CGWCG 1 cut(s) 134
HpyAV CCTTC 1 cut(s) 46
HpyCH4III ACNGT 4 cut(s) 274, 465, 482, 724
HpyCH4IV ACGT 1 cut(s) 561
HpyCH4V TGCA 4 cut(s) 40, 72, 180, 535
HpyF10VI GCNNNNNNNGC 4 cut(s) 113, 415, 434, 684
HpyF3I CTNAG 1 cut(s) 267
HpySE526I ACGT 1 cut(s) 561
Hsp92I GRCGYC 1 cut(s) 132
Hsp92II CATG 1 cut(s) 76
KflI GGGWCCC 1 cut(s) 549
Kzo9I GATC 1 cut(s) 213
LmnI GCTCC 4 cut(s) 425, 496, 655, 733
LpnPI CCDG 8 cut(s) 269, 279, 451, 460, 482, 507, 537, 712
Lsp1109I GCAGC 3 cut(s) 225, 566, 696
LweI GCATC 4 cut(s) 19, 27, 94, 377
MaeI CTAG 2 cut(s) 357, 693
MaeII ACGT 1 cut(s) 561
MaeIII GTNAC 1 cut(s) 778
MalI GATC 1 cut(s) 215
MbiI CCGCTC 1 cut(s) 220
MboI GATC 1 cut(s) 213
MboII GAAGA 4 cut(s) 155, 637, 677, 728
MhlI GDGCHC 1 cut(s) 512
MluCI AATT 1 cut(s) 738
MlyI GAGTC 2 cut(s) 152, 786
Mph1103I ATGCAT 1 cut(s) 42
MroXI GAANNNNTTC 1 cut(s) 464
MslI CAYNNNNRTG 1 cut(s) 180
MspI CCGG 6 cut(s) 256, 438, 447, 469, 494, 699
MspR9I CCNGG 3 cut(s) 447, 448, 700
Mva1269I GAATGC 1 cut(s) 680
MwoI GCNNNNNNNGC 4 cut(s) 113, 415, 434, 684
NciI CCSGG 3 cut(s) 447, 448, 700
NdeII GATC 1 cut(s) 213
NlaIII CATG 1 cut(s) 76
NmeAIII GCCGAG 1 cut(s) 421
NmuCI GTSAC 1 cut(s) 778
NsiI ATGCAT 1 cut(s) 42
PaeR7I CTCGAG 1 cut(s) 382
PcsI WCGNNNNNNNCGW 1 cut(s) 138
PctI GAATGC 1 cut(s) 680
PdmI GAANNNNTTC 1 cut(s) 464
PfeI GAWTC 1 cut(s) 824
PinAI ACCGGT 1 cut(s) 255
PkrI GCNGC 8 cut(s) 91, 240, 408, 581, 618, 680, 683, 686
PleI GAGTC 2 cut(s) 152, 785
PmaCI CACGTG 1 cut(s) 562
PmlI CACGTG 1 cut(s) 562
PpsI GAGTC 2 cut(s) 152, 785
Ppu21I YACGTR 1 cut(s) 562
PpuMI RGGWCCY 3 cut(s) 549, 622, 879
Psp5II RGGWCCY 3 cut(s) 549, 622, 879
PspCI CACGTG 1 cut(s) 562
PspPI GGNCC 6 cut(s) 435, 440, 549, 622, 703, 879
PspPPI RGGWCCY 3 cut(s) 549, 622, 879
RsaI GTAC 2 cut(s) 284, 558
RsaNI GTAC 2 cut(s) 283, 557
RseI CAYNNNNRTG 1 cut(s) 180
SatI GCNGC 8 cut(s) 90, 239, 407, 580, 617, 679, 682, 685
Sau3AI GATC 1 cut(s) 213
Sau96I GGNCC 6 cut(s) 435, 440, 549, 622, 703, 879
ScaI AGTACT 1 cut(s) 284
SchI GAGTC 2 cut(s) 152, 786
ScrFI CCNGG 3 cut(s) 447, 448, 700
SduI GDGCHC 1 cut(s) 512
SfaNI GCATC 4 cut(s) 19, 27, 94, 377
Sfr274I CTCGAG 1 cut(s) 382
SinI GGWCC 5 cut(s) 440, 549, 622, 703, 879
SlaI CTCGAG 1 cut(s) 382
SmaI CCCGGG 1 cut(s) 448
SmiMI CAYNNNNRTG 1 cut(s) 180
SmlI CTYRAG 1 cut(s) 382
SmoI CTYRAG 1 cut(s) 382
SpeI ACTAGT 2 cut(s) 356, 692
Sse9I AATT 1 cut(s) 738
SspMI CTAG 2 cut(s) 357, 693
StyD4I CCNGG 3 cut(s) 445, 446, 698
TaaI ACNGT 4 cut(s) 274, 465, 482, 724
TaiI ACGT 1 cut(s) 564
TaqI TCGA 5 cut(s) 141, 216, 383, 540, 766
TasI AATT 1 cut(s) 738
TatI WGTACW 1 cut(s) 282
TauI GCSGC 5 cut(s) 92, 409, 619, 681, 684
TfiI GAWTC 1 cut(s) 824
TseFI GTSAC 1 cut(s) 778
TseI GCWGC 3 cut(s) 238, 579, 684
Tsp45I GTSAC 1 cut(s) 778
TspDTI ATGAA 1 cut(s) 89
TspMI CCCGGG 1 cut(s) 446
VpaK11BI GGWCC 5 cut(s) 440, 549, 622, 703, 879
XhoI CTCGAG 1 cut(s) 382
XmaI CCCGGG 1 cut(s) 446
XmiI GTMKAC 1 cut(s) 207
XmnI GAANNNNTTC 1 cut(s) 464
XspI CTAG 2 cut(s) 357, 693
ZrmI AGTACT 1 cut(s) 284
Zsp2I ATGCAT 1 cut(s) 42
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.