Rmu_sc0001190.1_g000039

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001190.1
OG0000075
Physical Location & Seq
Forward (+)
144441 .. 146755
2315 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001190.1_g000039.1.cds

Sequence Viewer

Length: 1455 bp
atggcggttctttgtatcatagtgaggcaagataccagtctgaccccgctagaggaaaagcgcattataagggttatgggcaagttcccgaaggggaagagggggttttatcgcatgtgtagactagcgatatatgagagatttgcgttggggaggctccctgtcaacatgcctagtgagtctaccaccaagagtgatgccccttatgctaaagtgaatactgatgccatcatcgaagagctgctgcaagactcggaggtggtgaggcgttgcaatgtggatttggcgaacaaggtagtatacgagaccgagtattgggtaagcatgcagttgcccgatgacgtgtaccagtggtttcccgatactgtgctggagtatcttaacagtcgggatatgaatgctgaggtgccggtgggtgctgatgaagcgttctcgggctccagtggggcccgagttcggagggaggctgtgcatgcggtgaaagttccgatagggggaagtgtgctcgctgttgtccaagttgaggggcagtcccccagtactcgtgtggagggaggggacctcgatactaagcagagtgcccgtgatgctgtagggcaactggcgccacctttggaggtggaaatttctgtggaggagttatttgaagaagtggagcatcgtcagagagataccagcgccagggttcgcctagtcgaggacgtggtgttggagcagcttgagggtgtgtttggtgccgatgttagggactgggaggccgaggctgtagcgcgcagcgagtcctcggagagggtggacgtgataaagagtccccccatcggtgtgagtattgatactcgtgggggaaagaggtccggagttgaggaggtgggaagttctccgtctacaagtgagggttctcgtcactctcgagaagaggttatcggagggctctcgcgaactctgagtgagattgacattgctaatggtgcgattgtgcatatggtgactgatctgcgcaattgtcatcgcaatcgtggtcgtgttaacgtggatgatcctcgccaggggtatcaagatgctcgggagaggttgatgagggagtctcggcggcgggaggctgaggaggtcgttgcccctttgagggaatcgaatttggacttgaccggcaagttgcagctgaccgaggtgggtttgaaagccctggaggaggttagggcccaagttcacactgcggaagagtggttgcgagaactggagggccaggtccaggatcgtgatgcctacgagaaggatgtggagttggagcgactaaggaaagaggtggacgaggaacattctcgggctagtaccttcgctgaagattacatttgtttatgggctgtggtcgagagttacctagacaagctccataaagccaagcgagacggtgcagccaaggctgtggatcattatcttttgttgttcaacttctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

484

Amino Acids

54.45

Weight (kDa)

5.03

Isoelectric Point (pI)

49.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 68
Acc16I TGCGCA 1 cut(s) 998
AccB1I GGYRCC 3 cut(s) 406, 604, 734
AccI GTMKAC 4 cut(s) 121, 182, 300, 884
AccII CGCG 2 cut(s) 772, 937
AccIII TCCGGA 1 cut(s) 854
AciI CCGC 6 cut(s) 5, 47, 476, 1090, 1093, 1214
AclWI GGATC 3 cut(s) 1031, 1260, 1434
AcsI RAATTY 2 cut(s) 624, 1132
AcuI CTGAAG 1 cut(s) 1359
AcyI GRCGYC 1 cut(s) 605
AfaI GTAC 3 cut(s) 347, 541, 1330
AflIII ACRYGT 1 cut(s) 342
AgsI TTSAA 3 cut(s) 647, 1177, 1447
AjiI CACGTC 3 cut(s) 343, 703, 799
AjnI CCWGG 5 cut(s) 680, 1044, 1182, 1242, 1248
AluBI AGCT 4 cut(s) 241, 718, 1159, 1387
AluI AGCT 4 cut(s) 241, 718, 1159, 1387
Alw21I GWGCWC 1 cut(s) 507
Alw26I GTCTC 3 cut(s) 299, 1089, 1398
AlwI GGATC 3 cut(s) 1031, 1260, 1434
Ama87I CYCGRG 5 cut(s) 433, 450, 909, 1062, 1320
Aor13HI TCCGGA 1 cut(s) 854
AoxI GGCC 4 cut(s) 447, 756, 1197, 1240
ApaI GGGCCC 2 cut(s) 451, 1201
ApeKI GCWGC 6 cut(s) 241, 244, 715, 774, 1156, 1412
ApoI RAATTY 2 cut(s) 624, 1132
AspLEI GCGC 6 cut(s) 63, 607, 680, 772, 774, 999
AspS9I GGNCC 8 cut(s) 447, 448, 559, 852, 1197, 1198, 1240, 1246
AsuHPI GGTGA 3 cut(s) 274, 490, 997
AvaI CYCGRG 5 cut(s) 433, 450, 909, 1062, 1320
AvaII GGWCC 3 cut(s) 559, 852, 1246
BaeGI GKGCMC 3 cut(s) 451, 583, 1201
BanI GGYRCC 3 cut(s) 406, 604, 734
BanII GRGCYC 4 cut(s) 440, 451, 933, 1201
BauI CACGAG 2 cut(s) 543, 837
Bbv12I GWGCWC 1 cut(s) 507
BbvCI CCTCAGC 2 cut(s) 402, 1101
BbvI GCAGC 6 cut(s) 228, 231, 727, 786, 1168, 1424
BccI CCATC 2 cut(s) 236, 824
BciT130I CCWGG 5 cut(s) 682, 1046, 1184, 1244, 1250
BcoDI GTCTC 3 cut(s) 299, 1089, 1398
BfaI CTAG 7 cut(s) 50, 125, 174, 692, 1326, 1379, 1453
BfmI CTRYAG 2 cut(s) 591, 765
BfoI RGCGCY 2 cut(s) 608, 681
BisI GCNGC 7 cut(s) 242, 245, 716, 775, 1091, 1157, 1413
BlsI GCNGC 7 cut(s) 243, 246, 717, 776, 1092, 1158, 1414
BmcAI AGTACT 1 cut(s) 541
Bme1390I CCNGG 5 cut(s) 682, 1046, 1184, 1244, 1250
Bme18I GGWCC 3 cut(s) 559, 852, 1246
BmeT110I CYCGRG 5 cut(s) 433, 450, 909, 1062, 1320
BmgBI CACGTC 3 cut(s) 343, 703, 799
BmgT120I GGNCC 8 cut(s) 447, 448, 559, 852, 1197, 1198, 1240, 1246
BmiI GGNNCC 9 cut(s) 158, 408, 439, 448, 449, 560, 606, 736, 1199
BmrFI CCNGG 5 cut(s) 682, 1046, 1184, 1244, 1250
BmrI ACTGGG 2 cut(s) 531, 760
BmsI GCATC 6 cut(s) 187, 214, 577, 667, 1048, 1249
BmuI ACTGGG 2 cut(s) 531, 760
BplI GAGNNNNNCTC 4 cut(s) 546, 578, 1069, 1101
BpmI CTGGAG 4 cut(s) 392, 424, 1205, 1256
Bpu10I CCTNAGC 2 cut(s) 402, 1101
BpuEI CTTGAG 1 cut(s) 740
BsaBI GATNNNNATC 1 cut(s) 1431
BsaHI GRCGYC 1 cut(s) 605
BsaI GGTCTC 1 cut(s) 299
BsaJI CCNNGG 7 cut(s) 681, 759, 783, 1045, 1164, 1182, 1416
BsaWI WCCGGW 1 cut(s) 854
Bse118I RCCGGY 2 cut(s) 409, 1145
Bse1I ACTGG 7 cut(s) 36, 349, 441, 537, 606, 755, 1239
Bse3DI GCAATG 2 cut(s) 280, 957
Bse8I GATNNNNATC 1 cut(s) 1431
BseAI TCCGGA 1 cut(s) 854
BseBI CCWGG 5 cut(s) 682, 1046, 1184, 1244, 1250
BseDI CCNNGG 7 cut(s) 681, 759, 783, 1045, 1164, 1182, 1416
BseGI GGATG 2 cut(s) 1039, 1279
BseJI GATNNNNATC 1 cut(s) 1431
BseMI GCAATG 2 cut(s) 280, 957
BseMII CTCAG 3 cut(s) 393, 935, 1092
BseNI ACTGG 7 cut(s) 36, 349, 441, 537, 606, 755, 1239
BsePI GCGCGC 1 cut(s) 770
BseRI GAGGAG 4 cut(s) 650, 878, 1118, 1202
BseSI GKGCMC 3 cut(s) 451, 583, 1201
BseXI GCAGC 6 cut(s) 228, 231, 727, 786, 1168, 1424
BsgI GTGCAG 1 cut(s) 1431
Bsh1236I CGCG 2 cut(s) 772, 937
BshFI GGCC 4 cut(s) 449, 758, 1199, 1242
BshNI GGYRCC 3 cut(s) 406, 604, 734
BsiHKAI GWGCWC 1 cut(s) 507
BsiHKCI CYCGRG 5 cut(s) 433, 450, 909, 1062, 1320
BsiSI CCGG 3 cut(s) 410, 855, 1146
BslFI GGGAC 4 cut(s) 517, 572, 761, 795
BsmAI GTCTC 3 cut(s) 299, 1089, 1398
BsmBI CGTCTC 1 cut(s) 1398
BsmFI GGGAC 4 cut(s) 517, 572, 761, 795
BsmI GAATGC 1 cut(s) 403
BsnI GGCC 4 cut(s) 449, 758, 1199, 1242
Bso31I GGTCTC 1 cut(s) 299
BsoBI CYCGRG 5 cut(s) 433, 450, 909, 1062, 1320
Bsp120I GGGCCC 2 cut(s) 447, 1197
Bsp1286I GDGCHC 6 cut(s) 440, 451, 507, 583, 933, 1201
Bsp13I TCCGGA 1 cut(s) 854
Bsp143I GATC 4 cut(s) 991, 1036, 1252, 1426
Bsp68I TCGCGA 1 cut(s) 937
BspACI CCGC 6 cut(s) 5, 47, 476, 1090, 1093, 1214
BspANI GGCC 4 cut(s) 449, 758, 1199, 1242
BspCNI CTCAG 3 cut(s) 394, 936, 1093
BspEI TCCGGA 1 cut(s) 854
BspFNI CGCG 2 cut(s) 772, 937
BspLI GGNNCC 9 cut(s) 158, 408, 439, 448, 449, 560, 606, 736, 1199
BspPI GGATC 3 cut(s) 1031, 1260, 1434
BspQI GCTCTTC 1 cut(s) 231
BspT107I GGYRCC 3 cut(s) 406, 604, 734
BspTNI GGTCTC 1 cut(s) 299
BsrDI GCAATG 2 cut(s) 280, 957
BsrFI RCCGGY 2 cut(s) 409, 1145
BsrI ACTGG 7 cut(s) 36, 349, 441, 537, 606, 755, 1239
BssAI RCCGGY 2 cut(s) 409, 1145
BssECI CCNNGG 7 cut(s) 681, 759, 783, 1045, 1164, 1182, 1416
BssHII GCGCGC 1 cut(s) 770
BssMI GATC 4 cut(s) 991, 1036, 1252, 1426
BssNAI GTATAC 1 cut(s) 301
BssNI GRCGYC 1 cut(s) 605
BssSI CACGAG 2 cut(s) 543, 837
BssT1I CCWWGG 1 cut(s) 1416
Bst1107I GTATAC 1 cut(s) 301
Bst2BI CACGAG 2 cut(s) 543, 837
Bst2UI CCWGG 5 cut(s) 682, 1046, 1184, 1244, 1250
Bst4CI ACNGT 3 cut(s) 367, 386, 1409
Bst6I CTCTTC 4 cut(s) 92, 231, 909, 1212
BstACI GRCGYC 1 cut(s) 605
BstC8I GCNNGC 4 cut(s) 326, 474, 507, 772
BstDEI CTNAG 5 cut(s) 402, 570, 944, 1101, 1292
BstENI CCTNNNNNAGG 3 cut(s) 695, 787, 1187
BstF5I GGATG 2 cut(s) 1039, 1279
BstFNI CGCG 2 cut(s) 772, 937
BstH2I RGCGCY 2 cut(s) 608, 681
BstHHI GCGC 6 cut(s) 63, 607, 680, 772, 774, 999
BstKTI GATC 4 cut(s) 994, 1039, 1255, 1429
BstMAI GTCTC 3 cut(s) 299, 1089, 1398
BstMBI GATC 4 cut(s) 991, 1036, 1252, 1426
BstMWI GCNNNNNNNGC 7 cut(s) 206, 425, 473, 587, 604, 968, 1418
BstNI CCWGG 5 cut(s) 682, 1046, 1184, 1244, 1250
BstNSI RCATGY 4 cut(s) 118, 172, 328, 476
BstSCI CCNGG 5 cut(s) 680, 1044, 1182, 1242, 1248
BstSFI CTRYAG 2 cut(s) 591, 765
BstSLI GKGCMC 3 cut(s) 451, 583, 1201
BstUI CGCG 2 cut(s) 772, 937
BstV1I GCAGC 6 cut(s) 228, 231, 727, 786, 1168, 1424
BstXI CCANNNNNNTGG 1 cut(s) 1423
BstZ17I GTATAC 1 cut(s) 301
BsuRI GGCC 4 cut(s) 449, 758, 1199, 1242
BtgZI GCGATG 1 cut(s) 992
BtrI CACGTC 3 cut(s) 343, 703, 799
BtsCI GGATG 2 cut(s) 1039, 1279
BtsI GCAGTG 1 cut(s) 1209
BtsIMutI CAGTG 3 cut(s) 356, 448, 1209
BtuMI TCGCGA 1 cut(s) 937
Cac8I GCNNGC 4 cut(s) 326, 474, 507, 772
CfoI GCGC 6 cut(s) 63, 607, 680, 772, 774, 999
Cfr10I RCCGGY 2 cut(s) 409, 1145
Cfr13I GGNCC 8 cut(s) 447, 448, 559, 852, 1197, 1198, 1240, 1246
Csp6I GTAC 3 cut(s) 346, 540, 1329
CviAII CATG 4 cut(s) 115, 169, 325, 473
CviQI GTAC 3 cut(s) 346, 540, 1329
DdeI CTNAG 5 cut(s) 402, 570, 944, 1101, 1292
DinI GGCGCC 1 cut(s) 606
DpnI GATC 4 cut(s) 993, 1038, 1254, 1428
DpnII GATC 4 cut(s) 991, 1036, 1252, 1426
Eam1104I CTCTTC 4 cut(s) 92, 231, 909, 1212
EarI CTCTTC 4 cut(s) 92, 231, 909, 1212
Eco130I CCWWGG 1 cut(s) 1416
Eco24I GRGCYC 4 cut(s) 440, 451, 933, 1201
Eco31I GGTCTC 1 cut(s) 299
Eco47I GGWCC 3 cut(s) 559, 852, 1246
Eco57I CTGAAG 1 cut(s) 1359
Eco88I CYCGRG 5 cut(s) 433, 450, 909, 1062, 1320
EcoNI CCTNNNNNAGG 3 cut(s) 695, 787, 1187
EcoO109I RGGNCCY 3 cut(s) 447, 559, 1197
EcoRII CCWGG 5 cut(s) 680, 1044, 1182, 1242, 1248
EcoT14I CCWWGG 1 cut(s) 1416
EcoT38I GRGCYC 4 cut(s) 440, 451, 933, 1201
EgeI GGCGCC 1 cut(s) 606
EheI GGCGCC 1 cut(s) 606
ErhI CCWWGG 1 cut(s) 1416
Esp3I CGTCTC 1 cut(s) 1398
FaeI CATG 4 cut(s) 118, 172, 328, 476
FaqI GGGAC 4 cut(s) 517, 572, 761, 795
FatI CATG 4 cut(s) 114, 168, 324, 472
FauI CCCGC 2 cut(s) 54, 1086
FauNDI CATATG 1 cut(s) 981
FblI GTMKAC 4 cut(s) 121, 182, 300, 884
Fnu4HI GCNGC 7 cut(s) 242, 245, 716, 775, 1091, 1157, 1413
FokI GGATG 2 cut(s) 1046, 1286
FriOI GRGCYC 4 cut(s) 440, 451, 933, 1201
Fsp4HI GCNGC 7 cut(s) 242, 245, 716, 775, 1091, 1157, 1413
FspBI CTAG 7 cut(s) 50, 125, 174, 692, 1326, 1379, 1453
FspI TGCGCA 1 cut(s) 998
GlaI GCGC 6 cut(s) 62, 606, 679, 771, 773, 998
GluI GCNGC 7 cut(s) 242, 245, 716, 775, 1091, 1157, 1413
GsuI CTGGAG 4 cut(s) 392, 424, 1205, 1256
HaeII RGCGCY 2 cut(s) 608, 681
HaeIII GGCC 4 cut(s) 449, 758, 1199, 1242
HapII CCGG 3 cut(s) 410, 855, 1146
HhaI GCGC 6 cut(s) 63, 607, 680, 772, 774, 999
Hin1I GRCGYC 1 cut(s) 605
Hin1II CATG 4 cut(s) 118, 172, 328, 476
Hin6I GCGC 6 cut(s) 61, 605, 678, 770, 772, 997
HinP1I GCGC 6 cut(s) 61, 605, 678, 770, 772, 997
HincII GTYRAC 2 cut(s) 166, 1027
HindII GTYRAC 2 cut(s) 166, 1027
HinfI GANTC 6 cut(s) 179, 251, 779, 808, 1082, 1127
HpaI GTTAAC 1 cut(s) 1027
HpaII CCGG 3 cut(s) 410, 855, 1146
HphI GGTGA 3 cut(s) 274, 490, 997
Hpy188I TCNGA 8 cut(s) 42, 256, 459, 489, 666, 787, 926, 945
HpyAV CCTTC 3 cut(s) 85, 1264, 1342
HpyCH4III ACNGT 3 cut(s) 367, 386, 1409
HpyCH4IV ACGT 4 cut(s) 342, 702, 798, 1029
HpyCH4V TGCA 7 cut(s) 247, 273, 328, 472, 979, 1156, 1412
HpyF10VI GCNNNNNNNGC 7 cut(s) 206, 425, 473, 587, 604, 968, 1418
HpyF3I CTNAG 5 cut(s) 402, 570, 944, 1101, 1292
HpySE526I ACGT 4 cut(s) 342, 702, 798, 1029
Hsp92I GRCGYC 1 cut(s) 605
Hsp92II CATG 4 cut(s) 118, 172, 328, 476
HspAI GCGC 6 cut(s) 61, 605, 678, 770, 772, 997
KasI GGCGCC 1 cut(s) 604
Kpn2I TCCGGA 1 cut(s) 854
KspAI GTTAAC 1 cut(s) 1027
Kzo9I GATC 4 cut(s) 991, 1036, 1252, 1426
LguI GCTCTTC 1 cut(s) 231
LmnI GCTCC 6 cut(s) 162, 443, 655, 712, 1285, 1392
Lsp1109I GCAGC 6 cut(s) 228, 231, 727, 786, 1168, 1424
LweI GCATC 6 cut(s) 187, 214, 577, 667, 1048, 1249
MaeI CTAG 7 cut(s) 50, 125, 174, 692, 1326, 1379, 1453
MaeII ACGT 4 cut(s) 342, 702, 798, 1029
MaeIII GTNAC 3 cut(s) 902, 985, 1373
MalI GATC 4 cut(s) 993, 1038, 1254, 1428
MboI GATC 4 cut(s) 991, 1036, 1252, 1426
MboII GAAGA 6 cut(s) 109, 248, 659, 926, 1229, 1352
MfeI CAATTG 1 cut(s) 1000
MhlI GDGCHC 6 cut(s) 440, 451, 507, 583, 933, 1201
MluCI AATT 3 cut(s) 624, 1000, 1132
Mly113I GGCGCC 1 cut(s) 605
MlyI GAGTC 5 cut(s) 188, 245, 788, 817, 1091
MmeI TCCRAC 2 cut(s) 690, 1263
MroI TCCGGA 1 cut(s) 854
MseI TTAA 2 cut(s) 381, 1026
MslI CAYNNNNRTG 1 cut(s) 821
MspA1I CMGCKG 1 cut(s) 1159
MspI CCGG 3 cut(s) 410, 855, 1146
MspR9I CCNGG 5 cut(s) 682, 1046, 1184, 1244, 1250
MunI CAATTG 1 cut(s) 1000
Mva1269I GAATGC 1 cut(s) 403
MvaI CCWGG 5 cut(s) 682, 1046, 1184, 1244, 1250
MvnI CGCG 2 cut(s) 772, 937
MwoI GCNNNNNNNGC 7 cut(s) 206, 425, 473, 587, 604, 968, 1418
NarI GGCGCC 1 cut(s) 605
NdeI CATATG 1 cut(s) 981
NdeII GATC 4 cut(s) 991, 1036, 1252, 1426
NlaIII CATG 4 cut(s) 118, 172, 328, 476
NlaIV GGNNCC 9 cut(s) 158, 408, 439, 448, 449, 560, 606, 736, 1199
NmeAIII GCCGAG 2 cut(s) 784, 1066
NmuCI GTSAC 2 cut(s) 902, 985
NruI TCGCGA 1 cut(s) 937
NsbI TGCGCA 1 cut(s) 998
NspI RCATGY 4 cut(s) 118, 172, 328, 476
PaeI GCATGC 2 cut(s) 328, 476
PaeR7I CTCGAG 1 cut(s) 909
PauI GCGCGC 1 cut(s) 770
PciSI GCTCTTC 1 cut(s) 231
PcsI WCGNNNNNNNCGW 1 cut(s) 907
PctI GAATGC 1 cut(s) 403
PfeI GAWTC 1 cut(s) 1127
PfoI TCCNGGA 1 cut(s) 1248
PkrI GCNGC 7 cut(s) 243, 246, 717, 776, 1092, 1158, 1414
PleI GAGTC 5 cut(s) 187, 245, 787, 816, 1090
PluTI GGCGCC 1 cut(s) 608
PpsI GAGTC 5 cut(s) 187, 245, 787, 816, 1090
PpuMI RGGWCCY 1 cut(s) 559
PsiI TTATAA 1 cut(s) 68
Psp5II RGGWCCY 1 cut(s) 559
Psp6I CCWGG 5 cut(s) 680, 1044, 1182, 1242, 1248
PspGI CCWGG 5 cut(s) 680, 1044, 1182, 1242, 1248
PspN4I GGNNCC 9 cut(s) 158, 408, 439, 448, 449, 560, 606, 736, 1199
PspOMI GGGCCC 2 cut(s) 447, 1197
PspPI GGNCC 8 cut(s) 447, 448, 559, 852, 1197, 1198, 1240, 1246
PspPPI RGGWCCY 1 cut(s) 559
PteI GCGCGC 1 cut(s) 770
PvuII CAGCTG 1 cut(s) 1159
RruI TCGCGA 1 cut(s) 937
RsaI GTAC 3 cut(s) 347, 541, 1330
RsaNI GTAC 3 cut(s) 346, 540, 1329
RseI CAYNNNNRTG 1 cut(s) 821
SapI GCTCTTC 1 cut(s) 231
SaqAI TTAA 2 cut(s) 381, 1026
SatI GCNGC 7 cut(s) 242, 245, 716, 775, 1091, 1157, 1413
Sau3AI GATC 4 cut(s) 991, 1036, 1252, 1426
Sau96I GGNCC 8 cut(s) 447, 448, 559, 852, 1197, 1198, 1240, 1246
ScaI AGTACT 1 cut(s) 541
SchI GAGTC 5 cut(s) 188, 245, 788, 817, 1091
ScrFI CCNGG 5 cut(s) 682, 1046, 1184, 1244, 1250
SduI GDGCHC 6 cut(s) 440, 451, 507, 583, 933, 1201
SfaNI GCATC 6 cut(s) 187, 214, 577, 667, 1048, 1249
SfcI CTRYAG 2 cut(s) 591, 765
SfoI GGCGCC 1 cut(s) 606
Sfr274I CTCGAG 1 cut(s) 909
SinI GGWCC 3 cut(s) 559, 852, 1246
SlaI CTCGAG 1 cut(s) 909
SmiMI CAYNNNNRTG 1 cut(s) 821
SmlI CTYRAG 2 cut(s) 719, 909
SmoI CTYRAG 2 cut(s) 719, 909
SphI GCATGC 2 cut(s) 328, 476
Sse9I AATT 3 cut(s) 624, 1000, 1132
SsiI CCGC 6 cut(s) 5, 47, 476, 1090, 1093, 1214
SspDI GGCGCC 1 cut(s) 604
SspMI CTAG 7 cut(s) 50, 125, 174, 692, 1326, 1379, 1453
StyD4I CCNGG 5 cut(s) 680, 1044, 1182, 1242, 1248
StyI CCWWGG 1 cut(s) 1416
TaaI ACNGT 3 cut(s) 367, 386, 1409
TaiI ACGT 4 cut(s) 345, 705, 801, 1032
TaqI TCGA 6 cut(s) 234, 564, 696, 910, 1130, 1368
TaqII GACCGA 2 cut(s) 323, 1178
TasI AATT 3 cut(s) 624, 1000, 1132
TatI WGTACW 1 cut(s) 539
TauI GCSGC 1 cut(s) 1093
TfiI GAWTC 1 cut(s) 1127
Tru1I TTAA 2 cut(s) 381, 1026
Tru9I TTAA 2 cut(s) 381, 1026
TscAI CASTG 3 cut(s) 356, 448, 1216
TseFI GTSAC 2 cut(s) 902, 985
TseI GCWGC 6 cut(s) 241, 244, 715, 774, 1156, 1412
Tsp45I GTSAC 2 cut(s) 902, 985
TspDTI ATGAA 2 cut(s) 410, 438
TspGWI ACGGA 1 cut(s) 870
TspRI CASTG 3 cut(s) 356, 448, 1216
VpaK11BI GGWCC 3 cut(s) 559, 852, 1246
XagI CCTNNNNNAGG 3 cut(s) 695, 787, 1187
XapI RAATTY 2 cut(s) 624, 1132
XceI RCATGY 4 cut(s) 118, 172, 328, 476
XcmI CCANNNNNNNNNTGG 1 cut(s) 544
XhoI CTCGAG 1 cut(s) 909
XmiI GTMKAC 4 cut(s) 121, 182, 300, 884
XspI CTAG 7 cut(s) 50, 125, 174, 692, 1326, 1379, 1453
ZrmI AGTACT 1 cut(s) 541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.