Rmu_sc0017353.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0017353.1
OG0000075
Physical Location & Seq
Forward (+)
1 .. 3932
3932 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0017353.1_g000001.1.cds

Sequence Viewer

Length: 2118 bp
caggtttgtgagagcttggttccgtttcttttggtgtgtgacgcttgggatcccgatatctccctgaggggtatcggaaccctagctgggagcttacctcgctggtgtataggtgatacgagtcttgtgcttccgatacttgtgtgcttaagagtcgtggtaggcgagagggttcctctcgtggtggtgtctgtacgtcccgtggcaggggagaaggtgcttctagcagtcgcggtggaggtggttcccggggagctagccagggcgattccagaggacgtggtgggggagttccccgtaggagtattgcggggagttctcgaggaagtggctagggttcgtctcgcggagttccgagtacggttgagcaacccgtggtggctgatgtacctgaagcggagggtgttgaagtattggagatctcgcgttcgccacgggggcgattgctccatggcgctacgcccattgatcaaccgggtgtgggttgagcttcccgataccggaggagttgcagtatctgttgtcttgtctgaatgtagcgttagggtagctgtcgcccaatgcattgaggaaaataatgggagtattgctgctatggaagctaagcaagttgctgtgtcccagtatcagcgaggctcgcggccgtactgttatcaaggacttgccgtcgaatatctatgcgcattggcgggggaggccgtgcttagtaggcagccggtggtagaatcaggatatggtgcatcgagccccgagcttgttccaacccatctgcaggaggtggaggtgaccacgctggagaggaagagtgtggcgagggtgatgggtgcgtttcctaagggggcgagggggttctatcatctgtgtaggctcccgatatacgagagatttgatttggggaggtttccggcggatatgtcgaacgaggcccctagcaaaagtgacgccctatatgctaacatctatcccgataccattattcagggattgttgcaagaatcacagacggcaaggcgagtggatgttgacctgcctgataaagtgcgtgtgactgatcatcgggttagcatgtcgctgcccgatgagatgtatatgaggtttcccgatgccgtgctggagtatttcaatcaacgggccaaggaagaagctggtgttgaggggcatgagggtggcgttgctcgggaacggactcgagatgtccaggggccacccatgcaagctggtgaggcgagtaagcatccccaagtgcatggtggtgagcttcagtcccccgagactcgagaagtaacgaggcagtcctccctagtcctggcaggaggggagggtcttggtgacgtggcttgggtctcaaagcccacggtggaggtggatatttcattcaaggatttgctggaggagcgggaagtgattaaggtggacagcatagaggcgaaggtgaccagccaggctgttggtgagataggcctgaaggttgaggttcctgaggtgcaacctgagcctgcggggggtatcatcgaggttgcccaagttacagagacggggacccctgatggcgagggggagggagcccgagtgtcgaacacgtgtgcccatacagatggggtcggattgaggaaaaggaccgccttgcagctttgtctcgagagtcccccagttggtgttgcttgggacactcatggtatagctggcggtctcgcgctcaccctgggcgagatcagaattactgatggtgccatccttcatatggttgccgacttgcgaaactatcattgcaggagatccatgcctagggtatcgggaggctcaggagaggctgatgaggtgcaggatgtgaacctgaattaccacccctctagcgagttggtggctcattttgatggggagattgtgcggttgggaggggagctggaagccgagaaggaacggacgcgcgagcttcagagttcaatggactatgacctggtggagctcgaggatatgaggcgagtaatcgatgaagggattgcgaggaggatggagctggaacgagcacttgccatagaggaggctcgtcgtcaagaggctgagggtactattgccccactgaaggaggccaatctggagctaactgggaagctgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

705

Amino Acids

77.13

Weight (kDa)

5.06

Isoelectric Point (pI)

46.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 682
Acc36I ACCTGC 1 cut(s) 1035
AccB1I GGYRCC 1 cut(s) 1727
AccBSI CCGCTC 1 cut(s) 1396
AccII CGCG 7 cut(s) 233, 347, 426, 640, 1694, 1927, 1929
AclWI GGATC 3 cut(s) 44, 57, 1770
AcoI YGGCCR 1 cut(s) 641
AcuI CTGAAG 5 cut(s) 413, 1244, 1484, 1919, 2102
AcvI CACGTG 1 cut(s) 1581
AcyI GRCGYC 1 cut(s) 942
AfaI GTAC 5 cut(s) 195, 360, 389, 647, 2068
AflII CTTAAG 1 cut(s) 148
AflIII ACRYGT 2 cut(s) 1578, 1580
AgsI TTSAA 4 cut(s) 409, 1123, 1378, 1944
AhdI GACNNNNNGTC 1 cut(s) 665
AjiI CACGTC 2 cut(s) 280, 1333
AjnI CCWGG 6 cut(s) 260, 1197, 1305, 1440, 1701, 1956
Alw21I GWGCWC 2 cut(s) 1968, 2029
Alw26I GTCTC 6 cut(s) 347, 1265, 1348, 1526, 1640, 1694
AlwI GGATC 3 cut(s) 44, 57, 1770
AlwNI CAGNNNCTG 1 cut(s) 518
AoxI GGCC 7 cut(s) 641, 696, 924, 1131, 1202, 1459, 2088
ApeKI GCWGC 4 cut(s) 590, 712, 1072, 1627
AspA2I CCTAGG 1 cut(s) 1784
AspLEI GCGC 4 cut(s) 457, 683, 1696, 1929
AspS9I GGNCC 5 cut(s) 925, 1131, 1202, 1539, 1617
AsuC2I CCSGG 3 cut(s) 249, 250, 476
AsuHPI GGTGA 9 cut(s) 125, 796, 829, 1232, 1265, 1340, 1444, 1463, 1690
AsuNHI GCTAGC 1 cut(s) 256
AvaII GGWCC 2 cut(s) 1539, 1617
AvrII CCTAGG 1 cut(s) 1784
AxyI CCTNAGG 3 cut(s) 65, 834, 1479
BaeGI GKGCMC 1 cut(s) 1588
BaeI ACNNNNGTAYC 2 cut(s) 128, 161
BamHI GGATCC 1 cut(s) 49
BanI GGYRCC 1 cut(s) 1727
BanII GRGCYC 3 cut(s) 749, 1567, 1968
BauI CACGAG 1 cut(s) 179
BbrPI CACGTG 1 cut(s) 1581
Bbv12I GWGCWC 2 cut(s) 1968, 2029
BbvCI CCTCAGC 1 cut(s) 2061
BbvI GCAGC 4 cut(s) 577, 724, 1059, 1639
BccI CCATC 8 cut(s) 774, 814, 1541, 1589, 1718, 1739, 1868, 2005
BceAI ACGGC 5 cut(s) 628, 650, 683, 1020, 1091
BcgI CGANNNNNNTGC 2 cut(s) 109, 143
BciT130I CCWGG 6 cut(s) 262, 1199, 1307, 1442, 1703, 1958
BclI TGATCA 2 cut(s) 468, 1051
BcnI CCSGG 3 cut(s) 249, 250, 476
BcoDI GTCTC 6 cut(s) 347, 1265, 1348, 1526, 1640, 1694
BfaI CTAG 8 cut(s) 83, 224, 257, 333, 930, 1301, 1785, 1851
BfmI CTRYAG 2 cut(s) 770, 2114
BfoI RGCGCY 1 cut(s) 458
BfrI CTTAAG 1 cut(s) 148
BfuAI ACCTGC 1 cut(s) 1035
BglI GCCNNNNNGGC 1 cut(s) 438
BglII AGATCT 1 cut(s) 419
BisI GCNGC 5 cut(s) 591, 641, 713, 1073, 1628
BlnI CCTAGG 1 cut(s) 1784
BlpI GCTNAGC 1 cut(s) 603
BlsI GCNGC 5 cut(s) 592, 642, 714, 1074, 1629
Bme1390I CCNGG 9 cut(s) 249, 250, 262, 476, 1199, 1307, 1442, 1703, 1958
Bme18I GGWCC 2 cut(s) 1539, 1617
BmeRI GACNNNNNGTC 1 cut(s) 665
BmgBI CACGTC 2 cut(s) 280, 1333
BmgT120I GGNCC 5 cut(s) 925, 1131, 1202, 1539, 1617
BmrFI CCNGG 9 cut(s) 249, 250, 262, 476, 1199, 1307, 1442, 1703, 1958
BmrI ACTGGG 3 cut(s) 616, 1643, 2115
BmsI GCATC 3 cut(s) 749, 1093, 1243
BmtI GCTAGC 1 cut(s) 260
BmuI ACTGGG 3 cut(s) 616, 1643, 2115
BplI GAGNNNNNCTC 4 cut(s) 82, 114, 160, 192
BpmI CTGGAG 4 cut(s) 815, 1133, 1409, 2117
Bpu10I CCTNAGC 3 cut(s) 1491, 1801, 2061
Bpu1102I GCTNAGC 1 cut(s) 603
BpuMI CCSGG 3 cut(s) 249, 250, 476
Bsa29I ATCGAT 1 cut(s) 1989
BsaAI YACGTR 1 cut(s) 1581
BsaHI GRCGYC 1 cut(s) 942
BsaI GGTCTC 2 cut(s) 1348, 1694
BsaWI WCCGGW 1 cut(s) 500
BsaXI ACNNNNNCTCC 4 cut(s) 498, 528, 1554, 1584
Bse118I RCCGGY 1 cut(s) 715
Bse1I ACTGG 3 cut(s) 622, 1649, 2110
Bse21I CCTNAGG 3 cut(s) 65, 834, 1479
Bse3DI GCAATG 1 cut(s) 1765
BseBI CCWGG 6 cut(s) 262, 1199, 1307, 1442, 1703, 1958
BseCI ATCGAT 1 cut(s) 1989
BseGI GGATG 5 cut(s) 1024, 1234, 1731, 1831, 2016
BseMI GCAATG 1 cut(s) 1765
BseMII CTCAG 5 cut(s) 56, 1470, 1482, 1815, 2052
BseNI ACTGG 3 cut(s) 622, 1649, 2110
BseRI GAGGAG 4 cut(s) 519, 1406, 2020, 2054
BseSI GKGCMC 1 cut(s) 1588
BseX3I CGGCCG 1 cut(s) 641
BseXI GCAGC 4 cut(s) 577, 724, 1059, 1639
BseYI CCCAGC 1 cut(s) 86
BsgI GTGCAG 1 cut(s) 1841
Bsh1236I CGCG 7 cut(s) 233, 347, 426, 640, 1694, 1927, 1929
Bsh1285I CGRYCG 1 cut(s) 644
BshFI GGCC 7 cut(s) 643, 698, 926, 1133, 1204, 1461, 2090
BshNI GGYRCC 1 cut(s) 1727
BshVI ATCGAT 1 cut(s) 1989
BsiEI CGRYCG 1 cut(s) 644
BsiHKAI GWGCWC 2 cut(s) 1968, 2029
BsiSI CCGG 5 cut(s) 249, 475, 501, 716, 905
BslFI GGGAC 6 cut(s) 183, 604, 1249, 1552, 1629, 1679
BsmAI GTCTC 6 cut(s) 347, 1265, 1348, 1526, 1640, 1694
BsmBI CGTCTC 2 cut(s) 347, 1526
BsmFI GGGAC 6 cut(s) 183, 604, 1249, 1552, 1629, 1679
BsnI GGCC 7 cut(s) 643, 698, 926, 1133, 1204, 1461, 2090
Bso31I GGTCTC 2 cut(s) 1348, 1694
Bsp1286I GDGCHC 5 cut(s) 749, 1567, 1588, 1968, 2029
Bsp143I GATC 6 cut(s) 49, 419, 468, 1051, 1710, 1775
Bsp1720I GCTNAGC 1 cut(s) 603
Bsp19I CCATGG 1 cut(s) 450
BspANI GGCC 7 cut(s) 643, 698, 926, 1133, 1204, 1461, 2090
BspCNI CTCAG 5 cut(s) 57, 1471, 1483, 1814, 2053
BspDI ATCGAT 1 cut(s) 1989
BspFNI CGCG 7 cut(s) 233, 347, 426, 640, 1694, 1927, 1929
BspMAI CTGCAG 1 cut(s) 774
BspMI ACCTGC 1 cut(s) 1035
BspOI GCTAGC 1 cut(s) 260
BspPI GGATC 3 cut(s) 44, 57, 1770
BspT107I GGYRCC 1 cut(s) 1727
BspTI CTTAAG 1 cut(s) 148
BspTNI GGTCTC 2 cut(s) 1348, 1694
BsrBI CCGCTC 1 cut(s) 1396
BsrDI GCAATG 1 cut(s) 1765
BsrFI RCCGGY 1 cut(s) 715
BsrI ACTGG 3 cut(s) 622, 1649, 2110
BssAI RCCGGY 1 cut(s) 715
BssMI GATC 6 cut(s) 49, 419, 468, 1051, 1710, 1775
BssNI GRCGYC 1 cut(s) 942
BssSI CACGAG 1 cut(s) 179
BssT1I CCWWGG 3 cut(s) 450, 1134, 1784
Bst2BI CACGAG 1 cut(s) 179
Bst2UI CCWGG 6 cut(s) 262, 1199, 1307, 1442, 1703, 1958
Bst4CI ACNGT 3 cut(s) 363, 650, 1357
Bst6I CTCTTC 1 cut(s) 797
BstACI GRCGYC 1 cut(s) 942
BstAFI CTTAAG 1 cut(s) 148
BstBAI YACGTR 1 cut(s) 1581
BstC8I GCNNGC 6 cut(s) 258, 638, 1215, 1497, 1684, 1931
BstDEI CTNAG 8 cut(s) 65, 603, 704, 834, 1479, 1491, 1801, 2061
BstDSI CCRYGG 5 cut(s) 201, 374, 433, 450, 1353
BstEII GGTNACC 2 cut(s) 784, 1432
BstF5I GGATG 5 cut(s) 1024, 1234, 1731, 1831, 2016
BstFNI CGCG 7 cut(s) 233, 347, 426, 640, 1694, 1927, 1929
BstH2I RGCGCY 1 cut(s) 458
BstHHI GCGC 4 cut(s) 457, 683, 1696, 1929
BstKTI GATC 6 cut(s) 52, 422, 471, 1054, 1713, 1778
BstMAI GTCTC 6 cut(s) 347, 1265, 1348, 1526, 1640, 1694
BstMBI GATC 6 cut(s) 49, 419, 468, 1051, 1710, 1775
BstMCI CGRYCG 1 cut(s) 644
BstNI CCWGG 6 cut(s) 262, 1199, 1307, 1442, 1703, 1958
BstNSI RCATGY 1 cut(s) 1069
BstPI GGTNACC 2 cut(s) 784, 1432
BstSCI CCNGG 9 cut(s) 247, 248, 260, 474, 1197, 1305, 1440, 1701, 1956
BstSFI CTRYAG 2 cut(s) 770, 2114
BstSLI GKGCMC 1 cut(s) 1588
BstUI CGCG 7 cut(s) 233, 347, 426, 640, 1694, 1927, 1929
BstV1I GCAGC 4 cut(s) 577, 724, 1059, 1639
BstX2I RGATCY 3 cut(s) 49, 419, 1775
BstXI CCANNNNNNTGG 3 cut(s) 1247, 1448, 1595
BstYI RGATCY 3 cut(s) 49, 419, 1775
BstZI CGGCCG 1 cut(s) 641
Bsu15I ATCGAT 1 cut(s) 1989
Bsu36I CCTNAGG 3 cut(s) 65, 834, 1479
BsuRI GGCC 7 cut(s) 643, 698, 926, 1133, 1204, 1461, 2090
BsuTUI ATCGAT 1 cut(s) 1989
BtgI CCRYGG 5 cut(s) 201, 374, 433, 450, 1353
BtrI CACGTC 2 cut(s) 280, 1333
BtsCI GGATG 5 cut(s) 1024, 1234, 1731, 1831, 2016
BtsIMutI CAGTG 1 cut(s) 2078
BveI ACCTGC 1 cut(s) 1035
Cac8I GCNNGC 6 cut(s) 258, 638, 1215, 1497, 1684, 1931
CaiI CAGNNNCTG 1 cut(s) 518
CfoI GCGC 4 cut(s) 457, 683, 1696, 1929
Cfr10I RCCGGY 1 cut(s) 715
Cfr13I GGNCC 5 cut(s) 925, 1131, 1202, 1539, 1617
Cfr9I CCCGGG 1 cut(s) 248
ClaI ATCGAT 1 cut(s) 1989
CseI GACGC 3 cut(s) 50, 950, 1933
CsiI ACCWGGT 1 cut(s) 1956
Csp6I GTAC 5 cut(s) 194, 359, 388, 646, 2067
CspCI CAANNNNNGTGG 2 cut(s) 996, 1031
CviAII CATG 7 cut(s) 451, 1066, 1160, 1210, 1247, 1673, 1780
CviQI GTAC 5 cut(s) 194, 359, 388, 646, 2067
DdeI CTNAG 8 cut(s) 65, 603, 704, 834, 1479, 1491, 1801, 2061
DpnI GATC 6 cut(s) 51, 421, 470, 1053, 1712, 1777
DpnII GATC 6 cut(s) 49, 419, 468, 1051, 1710, 1775
DriI GACNNNNNGTC 1 cut(s) 665
EaeI YGGCCR 1 cut(s) 641
EagI CGGCCG 1 cut(s) 641
Eam1104I CTCTTC 1 cut(s) 797
Eam1105I GACNNNNNGTC 1 cut(s) 665
EarI CTCTTC 1 cut(s) 797
EciI GGCGGA 1 cut(s) 923
Ecl136II GAGCTC 1 cut(s) 1966
EclXI CGGCCG 1 cut(s) 641
Eco130I CCWWGG 3 cut(s) 450, 1134, 1784
Eco147I AGGCCT 1 cut(s) 1461
Eco24I GRGCYC 3 cut(s) 749, 1567, 1968
Eco31I GGTCTC 2 cut(s) 1348, 1694
Eco32I GATATC 1 cut(s) 58
Eco47I GGWCC 2 cut(s) 1539, 1617
Eco52I CGGCCG 1 cut(s) 641
Eco53kI GAGCTC 1 cut(s) 1966
Eco57I CTGAAG 5 cut(s) 413, 1244, 1484, 1919, 2102
Eco72I CACGTG 1 cut(s) 1581
Eco81I CCTNAGG 3 cut(s) 65, 834, 1479
Eco91I GGTNACC 2 cut(s) 784, 1432
EcoICRI GAGCTC 1 cut(s) 1966
EcoO109I RGGNCCY 2 cut(s) 925, 1539
EcoO65I GGTNACC 2 cut(s) 784, 1432
EcoRII CCWGG 6 cut(s) 260, 1197, 1305, 1440, 1701, 1956
EcoRV GATATC 1 cut(s) 58
EcoT14I CCWWGG 3 cut(s) 450, 1134, 1784
EcoT22I ATGCAT 1 cut(s) 566
EcoT38I GRGCYC 3 cut(s) 749, 1567, 1968
ErhI CCWWGG 3 cut(s) 450, 1134, 1784
Esp3I CGTCTC 2 cut(s) 347, 1526
FaeI CATG 7 cut(s) 454, 1069, 1163, 1213, 1250, 1676, 1783
FaqI GGGAC 6 cut(s) 183, 604, 1249, 1552, 1629, 1679
FatI CATG 7 cut(s) 450, 1065, 1159, 1209, 1246, 1672, 1779
FauI CCCGC 4 cut(s) 303, 682, 1389, 1492
FauNDI CATATG 1 cut(s) 1740
FbaI TGATCA 2 cut(s) 468, 1051
Fnu4HI GCNGC 5 cut(s) 591, 641, 713, 1073, 1628
FokI GGATG 5 cut(s) 1031, 1221, 1718, 1838, 2023
FriOI GRGCYC 3 cut(s) 749, 1567, 1968
Fsp4HI GCNGC 5 cut(s) 591, 641, 713, 1073, 1628
FspAI RTGCGCAY 1 cut(s) 682
FspBI CTAG 8 cut(s) 83, 224, 257, 333, 930, 1301, 1785, 1851
FspI TGCGCA 1 cut(s) 682
GlaI GCGC 4 cut(s) 456, 682, 1695, 1928
GluI GCNGC 5 cut(s) 591, 641, 713, 1073, 1628
GsaI CCCAGC 1 cut(s) 90
GsuI CTGGAG 4 cut(s) 815, 1133, 1409, 2117
HaeII RGCGCY 1 cut(s) 458
HaeIII GGCC 7 cut(s) 643, 698, 926, 1133, 1204, 1461, 2090
HapII CCGG 5 cut(s) 249, 475, 501, 716, 905
HgaI GACGC 3 cut(s) 50, 950, 1933
HhaI GCGC 4 cut(s) 457, 683, 1696, 1929
Hin1I GRCGYC 1 cut(s) 942
Hin1II CATG 7 cut(s) 454, 1069, 1163, 1213, 1250, 1676, 1783
Hin6I GCGC 4 cut(s) 455, 681, 1694, 1927
HinP1I GCGC 4 cut(s) 455, 681, 1694, 1927
HincII GTYRAC 1 cut(s) 1024
HindII GTYRAC 1 cut(s) 1024
HinfI GANTC 8 cut(s) 121, 153, 268, 725, 995, 1186, 1273, 1642
HpaII CCGG 5 cut(s) 249, 475, 501, 716, 905
HphI GGTGA 9 cut(s) 125, 796, 829, 1232, 1265, 1340, 1444, 1463, 1690
Hpy166II GTNNAC 3 cut(s) 1024, 1414, 1831
Hpy188I TCNGA 7 cut(s) 77, 135, 356, 532, 1604, 1715, 1938
Hpy8I GTNNAC 3 cut(s) 1024, 1414, 1831
Hpy99I CGWCG 2 cut(s) 671, 2052
HpyAV CCTTC 7 cut(s) 208, 1423, 1459, 1745, 1909, 1988, 2077
HpyCH4III ACNGT 3 cut(s) 363, 650, 1357
HpyCH4IV ACGT 4 cut(s) 196, 279, 1332, 1580
HpyF3I CTNAG 8 cut(s) 65, 603, 704, 834, 1479, 1491, 1801, 2061
HpySE526I ACGT 4 cut(s) 196, 279, 1332, 1580
Hsp92I GRCGYC 1 cut(s) 942
Hsp92II CATG 7 cut(s) 454, 1069, 1163, 1213, 1250, 1676, 1783
HspAI GCGC 4 cut(s) 455, 681, 1694, 1927
KflI GGGWCCC 1 cut(s) 1539
Ksp22I TGATCA 2 cut(s) 468, 1051
Kzo9I GATC 6 cut(s) 49, 419, 468, 1051, 1710, 1775
Lsp1109I GCAGC 4 cut(s) 577, 724, 1059, 1639
LweI GCATC 3 cut(s) 749, 1093, 1243
MabI ACCWGGT 1 cut(s) 1956
MaeI CTAG 8 cut(s) 83, 224, 257, 333, 930, 1301, 1785, 1851
MaeII ACGT 4 cut(s) 196, 279, 1332, 1580
MaeIII GTNAC 8 cut(s) 38, 784, 938, 1045, 1282, 1328, 1432, 1525
MalI GATC 6 cut(s) 51, 421, 470, 1053, 1712, 1777
MbiI CCGCTC 1 cut(s) 1396
MboI GATC 6 cut(s) 49, 419, 468, 1051, 1710, 1775
MboII GAAGA 2 cut(s) 814, 1151
MflI RGATCY 3 cut(s) 49, 419, 1775
MhlI GDGCHC 5 cut(s) 749, 1567, 1588, 1968, 2029
MluCI AATT 2 cut(s) 1716, 1837
MlyI GAGTC 5 cut(s) 130, 162, 1180, 1267, 1651
MmeI TCCRAC 2 cut(s) 785, 1582
Mph1103I ATGCAT 1 cut(s) 566
MseI TTAA 2 cut(s) 149, 1407
MslI CAYNNNNRTG 4 cut(s) 1164, 1251, 1593, 1872
MspCI CTTAAG 1 cut(s) 148
MspI CCGG 5 cut(s) 249, 475, 501, 716, 905
MspR9I CCNGG 9 cut(s) 249, 250, 262, 476, 1199, 1307, 1442, 1703, 1958
MvaI CCWGG 6 cut(s) 262, 1199, 1307, 1442, 1703, 1958
MvnI CGCG 7 cut(s) 233, 347, 426, 640, 1694, 1927, 1929
NciI CCSGG 3 cut(s) 249, 250, 476
NcoI CCATGG 1 cut(s) 450
NdeI CATATG 1 cut(s) 1740
NdeII GATC 6 cut(s) 49, 419, 468, 1051, 1710, 1775
NheI GCTAGC 1 cut(s) 256
NlaIII CATG 7 cut(s) 454, 1069, 1163, 1213, 1250, 1676, 1783
NmeAIII GCCGAG 1 cut(s) 1936
NmuCI GTSAC 6 cut(s) 38, 784, 938, 1045, 1328, 1432
NsbI TGCGCA 1 cut(s) 682
NsiI ATGCAT 1 cut(s) 566
NspI RCATGY 1 cut(s) 1069
PaeR7I CTCGAG 5 cut(s) 320, 1188, 1275, 1637, 1967
PasI CCCWGGG 1 cut(s) 1702
PceI AGGCCT 1 cut(s) 1461
PcsI WCGNNNNNNNCGW 1 cut(s) 162
PfeI GAWTC 3 cut(s) 268, 725, 995
PkrI GCNGC 5 cut(s) 592, 642, 714, 1074, 1629
PleI GAGTC 5 cut(s) 129, 161, 1180, 1267, 1650
PmaCI CACGTG 1 cut(s) 1581
PmlI CACGTG 1 cut(s) 1581
PpsI GAGTC 5 cut(s) 129, 161, 1180, 1267, 1650
Ppu21I YACGTR 1 cut(s) 1581
PpuMI RGGWCCY 1 cut(s) 1539
Psp124BI GAGCTC 1 cut(s) 1968
Psp5II RGGWCCY 1 cut(s) 1539
Psp6I CCWGG 6 cut(s) 260, 1197, 1305, 1440, 1701, 1956
PspCI CACGTG 1 cut(s) 1581
PspEI GGTNACC 2 cut(s) 784, 1432
PspFI CCCAGC 1 cut(s) 86
PspGI CCWGG 6 cut(s) 260, 1197, 1305, 1440, 1701, 1956
PspPI GGNCC 5 cut(s) 925, 1131, 1202, 1539, 1617
PspPPI RGGWCCY 1 cut(s) 1539
PspXI VCTCGAGB 1 cut(s) 1967
PsrI GAACNNNNNNTAC 2 cut(s) 1823, 1855
PstI CTGCAG 1 cut(s) 774
PstNI CAGNNNCTG 1 cut(s) 518
PsuI RGATCY 3 cut(s) 49, 419, 1775
RsaI GTAC 5 cut(s) 195, 360, 389, 647, 2068
RsaNI GTAC 5 cut(s) 194, 359, 388, 646, 2067
RseI CAYNNNNRTG 4 cut(s) 1164, 1251, 1593, 1872
SacI GAGCTC 1 cut(s) 1968
SaqAI TTAA 2 cut(s) 149, 1407
SatI GCNGC 5 cut(s) 591, 641, 713, 1073, 1628
Sau3AI GATC 6 cut(s) 49, 419, 468, 1051, 1710, 1775
Sau96I GGNCC 5 cut(s) 925, 1131, 1202, 1539, 1617
SchI GAGTC 5 cut(s) 130, 162, 1180, 1267, 1651
ScrFI CCNGG 9 cut(s) 249, 250, 262, 476, 1199, 1307, 1442, 1703, 1958
SduI GDGCHC 5 cut(s) 749, 1567, 1588, 1968, 2029
SexAI ACCWGGT 1 cut(s) 1956
SfaNI GCATC 3 cut(s) 749, 1093, 1243
SfcI CTRYAG 2 cut(s) 770, 2114
Sfr274I CTCGAG 5 cut(s) 320, 1188, 1275, 1637, 1967
SinI GGWCC 2 cut(s) 1539, 1617
SlaI CTCGAG 5 cut(s) 320, 1188, 1275, 1637, 1967
SmaI CCCGGG 1 cut(s) 250
SmiMI CAYNNNNRTG 4 cut(s) 1164, 1251, 1593, 1872
SmlI CTYRAG 6 cut(s) 148, 320, 1188, 1275, 1637, 1967
SmoI CTYRAG 6 cut(s) 148, 320, 1188, 1275, 1637, 1967
Sse9I AATT 2 cut(s) 1716, 1837
SseBI AGGCCT 1 cut(s) 1461
SspMI CTAG 8 cut(s) 83, 224, 257, 333, 930, 1301, 1785, 1851
SstI GAGCTC 1 cut(s) 1968
StuI AGGCCT 1 cut(s) 1461
StyD4I CCNGG 9 cut(s) 247, 248, 260, 474, 1197, 1305, 1440, 1701, 1956
StyI CCWWGG 3 cut(s) 450, 1134, 1784
TaaI ACNGT 3 cut(s) 363, 650, 1357
TaiI ACGT 4 cut(s) 199, 282, 1335, 1583
TasI AATT 2 cut(s) 1716, 1837
TauI GCSGC 1 cut(s) 643
TfiI GAWTC 3 cut(s) 268, 725, 995
Tru1I TTAA 2 cut(s) 149, 1407
Tru9I TTAA 2 cut(s) 149, 1407
TscAI CASTG 1 cut(s) 2085
TseFI GTSAC 6 cut(s) 38, 784, 938, 1045, 1328, 1432
TseI GCWGC 4 cut(s) 590, 712, 1072, 1627
Tsp45I GTSAC 6 cut(s) 38, 784, 938, 1045, 1328, 1432
TspDTI ATGAA 3 cut(s) 1362, 1727, 2007
TspGWI ACGGA 3 cut(s) 12, 1198, 1936
TspMI CCCGGG 1 cut(s) 248
TspRI CASTG 1 cut(s) 2085
Vha464I CTTAAG 1 cut(s) 148
VpaK11BI GGWCC 2 cut(s) 1539, 1617
XceI RCATGY 1 cut(s) 1069
XcmI CCANNNNNNNNNTGG 3 cut(s) 1247, 1360, 1738
XhoI CTCGAG 5 cut(s) 320, 1188, 1275, 1637, 1967
XmaI CCCGGG 1 cut(s) 248
XmaJI CCTAGG 1 cut(s) 1784
XspI CTAG 8 cut(s) 83, 224, 257, 333, 930, 1301, 1785, 1851
Zsp2I ATGCAT 1 cut(s) 566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.