Rmu_sc0013612.1_g000017

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013612.1
OG0000075
Physical Location & Seq
Reverse (-)
54711 .. 56489
1779 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013612.1_g000017.1.cds

Sequence Viewer

Length: 1203 bp
ctggtagggaaggccttgcttggttggaggccgctggaagaacccatacatggtgcatccgtttccaacccatctttgagtattgtgattgcattttttgtggacttttgcttgtggtgtgtgctaatagcatgtctttgtatcgtagtgaggcaggaggttaacctgaccacgctggagcaaaagcgtgtggcgagcgtgatgggtgattttcccaggggagcgaaggggttttatcgcctgtgtaggctcccgatatacgagaggtttcacttggggaggtgtccggagaatatgccgaacaaggcctctagcaagagcgactccctgtacgccgaagtcgatcatgataccattatgcaggggttgttacgagaatcggagacggcaaggcgagttgatgttgatctctcagataaggtgcgtgtgactgaccatcgggtgaacatgctgttgcccgacgagatgtatctgaggtttcccgatactatactggagtatcttaatcaacgagccgaggatgaggctgtgggcgagcgtccccaagtatttgttggcgagcaccagtcccttgagacttgggaggtagcgagacagtccccccgagtctcggtaggaggggtggagcttggtgatgtggctcggccttcggagccagtggttgaggtggagatctctgtcgaggagttgctagaagaagtggagcgttgccaaagcgatactagcgcttgtgctcgtccagtgcaggaagcggtgttggaacagttgggtgctgtctttggcaatgacactggcggtccagtctcgtgggaggtcattactgttgataatggagaggcggaggtaaccagccaagttgtaggcgagacggctccgatggttgaggttcttgaggtgaaaccaaagtcgacgagtgggggcttgcggggttctcgcaatgaggttgccgggggtctcgtgtgcaccctaggcgagattggagttattgatggtgccatcatgcatatggttgccgacttgcagaattttcatcgcgaccgcagtatgctgacagcatggtgtgtggtgcaggctagggagctgaatgctgagagggggcgggcacacgagcttcagagtgcattggaccaaggccaggtggactgcgaggatatgaggcgagcaattgatgaagggatcgcgaggaggatggagttggagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

400

Amino Acids

44.31

Weight (kDa)

4.76

Isoelectric Point (pI)

41.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 992
AccI GTMKAC 1 cut(s) 908
AccII CGCG 2 cut(s) 1035, 1181
AccIII TCCGGA 1 cut(s) 286
AciI CCGC 7 cut(s) 32, 752, 795, 839, 925, 1039, 1099
AclWI GGATC 1 cut(s) 1184
AcsI RAATTY 1 cut(s) 1024
AcuI CTGAAG 1 cut(s) 1097
AfaI GTAC 1 cut(s) 332
AfeI AGCGCT 1 cut(s) 727
AfiI CCNNNNNNNGG 3 cut(s) 50, 610, 1135
AjnI CCWGG 2 cut(s) 215, 1134
AluBI AGCT 3 cut(s) 628, 1081, 1111
AluI AGCT 3 cut(s) 628, 1081, 1111
Alw21I GWGCWC 3 cut(s) 564, 736, 965
Alw26I GTCTC 7 cut(s) 377, 569, 586, 613, 808, 860, 959
Alw44I GTGCAC 1 cut(s) 961
AlwI GGATC 1 cut(s) 1184
Ama87I CYCGRG 1 cut(s) 603
Aor13HI TCCGGA 1 cut(s) 286
Aor51HI AGCGCT 1 cut(s) 727
AoxI GGCC 5 cut(s) 12, 29, 306, 644, 1132
ApaLI GTGCAC 1 cut(s) 961
ApoI RAATTY 1 cut(s) 1024
AspA2I CCTAGG 1 cut(s) 967
AspLEI GCGC 1 cut(s) 728
AspS9I GGNCC 2 cut(s) 797, 1126
AsuC2I CCSGG 1 cut(s) 949
AsuHPI GGTGA 4 cut(s) 218, 454, 644, 907
AvaI CYCGRG 1 cut(s) 603
AvaII GGWCC 2 cut(s) 797, 1126
AvrII CCTAGG 1 cut(s) 967
BaeGI GKGCMC 2 cut(s) 965, 1105
BaeI ACNNNNGTAYC 2 cut(s) 482, 515
BanI GGYRCC 1 cut(s) 992
BarI GAAGNNNNNNTAC 2 cut(s) 30, 62
BauI CACGAG 3 cut(s) 805, 956, 1106
Bbv12I GWGCWC 3 cut(s) 564, 736, 965
BccI CCATC 7 cut(s) 79, 196, 444, 871, 983, 1004, 1183
BceAI ACGGC 2 cut(s) 402, 885
BciT130I CCWGG 2 cut(s) 217, 1136
BcnI CCSGG 1 cut(s) 949
BcoDI GTCTC 7 cut(s) 377, 569, 586, 613, 808, 860, 959
BfaI CTAG 5 cut(s) 312, 692, 723, 968, 1074
BfoI RGCGCY 1 cut(s) 729
BglII AGATCT 1 cut(s) 672
BisI GCNGC 1 cut(s) 32
BlnI CCTAGG 1 cut(s) 967
BlsI GCNGC 1 cut(s) 33
Bme1390I CCNGG 3 cut(s) 217, 949, 1136
Bme18I GGWCC 2 cut(s) 797, 1126
BmeT110I CYCGRG 1 cut(s) 603
BmgT120I GGNCC 2 cut(s) 797, 1126
BmiI GGNNCC 4 cut(s) 251, 654, 873, 994
BmrFI CCNGG 3 cut(s) 217, 949, 1136
BmsI GCATC 1 cut(s) 65
BpmI CTGGAG 2 cut(s) 197, 515
BpuEI CTTGAG 2 cut(s) 593, 911
BpuMI CCSGG 1 cut(s) 949
BsaBI GATNNNNATC 1 cut(s) 405
BsaI GGTCTC 1 cut(s) 959
BsaJI CCNNGG 6 cut(s) 215, 216, 516, 948, 967, 1129
BsaWI WCCGGW 1 cut(s) 286
BsaXI ACNNNNNCTCC 1 cut(s) 1184
Bsc4I CCNNNNNNNGG 3 cut(s) 50, 610, 1135
Bse1I ACTGG 6 cut(s) 498, 565, 656, 740, 796, 800
Bse3DI GCAATG 2 cut(s) 790, 943
Bse8I GATNNNNATC 1 cut(s) 405
BseAI TCCGGA 1 cut(s) 286
BseBI CCWGG 2 cut(s) 217, 1136
BseDI CCNNGG 6 cut(s) 215, 216, 516, 948, 967, 1129
BseGI GGATG 3 cut(s) 56, 526, 1194
BseJI GATNNNNATC 1 cut(s) 405
BseLI CCNNNNNNNGG 3 cut(s) 50, 610, 1135
BseMI GCAATG 2 cut(s) 790, 943
BseMII CTCAG 3 cut(s) 426, 464, 1080
BseNI ACTGG 6 cut(s) 498, 565, 656, 740, 796, 800
BseRI GAGGAG 2 cut(s) 698, 1198
BseSI GKGCMC 2 cut(s) 965, 1105
BsgI GTGCAG 2 cut(s) 764, 1088
Bsh1236I CGCG 2 cut(s) 1035, 1181
Bsh1285I CGRYCG 1 cut(s) 1039
BshFI GGCC 5 cut(s) 14, 31, 308, 646, 1134
BshNI GGYRCC 1 cut(s) 992
BsiEI CGRYCG 1 cut(s) 1039
BsiHKAI GWGCWC 3 cut(s) 564, 736, 965
BsiHKCI CYCGRG 1 cut(s) 603
BsiSI CCGG 2 cut(s) 287, 948
BslFI GGGAC 3 cut(s) 525, 553, 583
BslI CCNNNNNNNGG 3 cut(s) 50, 610, 1135
BsmAI GTCTC 7 cut(s) 377, 569, 586, 613, 808, 860, 959
BsmBI CGTCTC 2 cut(s) 377, 860
BsmFI GGGAC 3 cut(s) 525, 553, 583
BsmI GAATGC 1 cut(s) 1090
BsnI GGCC 5 cut(s) 14, 31, 308, 646, 1134
Bso31I GGTCTC 1 cut(s) 959
BsoBI CYCGRG 1 cut(s) 603
Bsp1286I GDGCHC 4 cut(s) 564, 736, 965, 1105
Bsp13I TCCGGA 1 cut(s) 286
Bsp143I GATC 4 cut(s) 343, 406, 672, 1176
Bsp68I TCGCGA 2 cut(s) 1035, 1181
BspACI CCGC 7 cut(s) 32, 752, 795, 839, 925, 1039, 1099
BspANI GGCC 5 cut(s) 14, 31, 308, 646, 1134
BspCNI CTCAG 3 cut(s) 425, 465, 1081
BspEI TCCGGA 1 cut(s) 286
BspFNI CGCG 2 cut(s) 1035, 1181
BspHI TCATGA 1 cut(s) 346
BspLI GGNNCC 4 cut(s) 251, 654, 873, 994
BspPI GGATC 1 cut(s) 1184
BspT107I GGYRCC 1 cut(s) 992
BspTNI GGTCTC 1 cut(s) 959
BsrDI GCAATG 2 cut(s) 790, 943
BsrI ACTGG 6 cut(s) 498, 565, 656, 740, 796, 800
BssECI CCNNGG 6 cut(s) 215, 216, 516, 948, 967, 1129
BssMI GATC 4 cut(s) 343, 406, 672, 1176
BssSI CACGAG 3 cut(s) 805, 956, 1106
BssT1I CCWWGG 2 cut(s) 967, 1129
Bst2BI CACGAG 3 cut(s) 805, 956, 1106
Bst2UI CCWGG 2 cut(s) 217, 1136
Bst4CI ACNGT 3 cut(s) 597, 765, 823
BstC8I GCNNGC 7 cut(s) 196, 536, 560, 923, 1071, 1101, 1161
BstDEI CTNAG 3 cut(s) 412, 473, 1089
BstEII GGTNACC 1 cut(s) 844
BstF5I GGATG 3 cut(s) 56, 526, 1194
BstFNI CGCG 2 cut(s) 1035, 1181
BstH2I RGCGCY 1 cut(s) 729
BstHHI GCGC 1 cut(s) 728
BstKTI GATC 4 cut(s) 346, 409, 675, 1179
BstMAI GTCTC 7 cut(s) 377, 569, 586, 613, 808, 860, 959
BstMBI GATC 4 cut(s) 343, 406, 672, 1176
BstMCI CGRYCG 1 cut(s) 1039
BstMWI GCNNNNNNNGC 3 cut(s) 652, 723, 969
BstNI CCWGG 2 cut(s) 217, 1136
BstNSI RCATGY 2 cut(s) 135, 451
BstPI GGTNACC 1 cut(s) 844
BstSCI CCNGG 3 cut(s) 215, 947, 1134
BstSLI GKGCMC 2 cut(s) 965, 1105
BstUI CGCG 2 cut(s) 1035, 1181
BstX2I RGATCY 1 cut(s) 672
BstXI CCANNNNNNTGG 1 cut(s) 807
BstYI RGATCY 1 cut(s) 672
BsuRI GGCC 5 cut(s) 14, 31, 308, 646, 1134
BtgZI GCGATG 1 cut(s) 1016
BtsCI GGATG 3 cut(s) 56, 526, 1194
BtsIMutI CAGTG 3 cut(s) 663, 747, 789
BtuMI TCGCGA 2 cut(s) 1035, 1181
Cac8I GCNNGC 7 cut(s) 196, 536, 560, 923, 1071, 1101, 1161
CciI TCATGA 1 cut(s) 346
CfoI GCGC 1 cut(s) 728
Cfr13I GGNCC 2 cut(s) 797, 1126
CseI GACGC 1 cut(s) 527
Csp6I GTAC 1 cut(s) 331
CviAII CATG 6 cut(s) 50, 132, 347, 448, 1000, 1056
CviQI GTAC 1 cut(s) 331
DdeI CTNAG 3 cut(s) 412, 473, 1089
DpnI GATC 4 cut(s) 345, 408, 674, 1178
DpnII GATC 4 cut(s) 343, 406, 672, 1176
EciI GGCGGA 1 cut(s) 854
Eco130I CCWWGG 2 cut(s) 967, 1129
Eco147I AGGCCT 2 cut(s) 14, 308
Eco31I GGTCTC 1 cut(s) 959
Eco47I GGWCC 2 cut(s) 797, 1126
Eco47III AGCGCT 1 cut(s) 727
Eco57I CTGAAG 1 cut(s) 1097
Eco88I CYCGRG 1 cut(s) 603
Eco91I GGTNACC 1 cut(s) 844
EcoO65I GGTNACC 1 cut(s) 844
EcoRII CCWGG 2 cut(s) 215, 1134
EcoT14I CCWWGG 2 cut(s) 967, 1129
EcoT22I ATGCAT 1 cut(s) 1005
ErhI CCWWGG 2 cut(s) 967, 1129
Esp3I CGTCTC 2 cut(s) 377, 860
FaeI CATG 6 cut(s) 53, 135, 350, 451, 1003, 1059
FaqI GGGAC 3 cut(s) 525, 553, 583
FatI CATG 6 cut(s) 49, 131, 346, 447, 999, 1055
FauI CCCGC 2 cut(s) 918, 1092
FauNDI CATATG 1 cut(s) 1005
FblI GTMKAC 1 cut(s) 908
Fnu4HI GCNGC 1 cut(s) 32
FokI GGATG 2 cut(s) 43, 533
Fsp4HI GCNGC 1 cut(s) 32
FspBI CTAG 5 cut(s) 312, 692, 723, 968, 1074
GlaI GCGC 1 cut(s) 727
GluI GCNGC 1 cut(s) 32
GsuI CTGGAG 2 cut(s) 197, 515
HaeII RGCGCY 1 cut(s) 729
HaeIII GGCC 5 cut(s) 14, 31, 308, 646, 1134
HapII CCGG 2 cut(s) 287, 948
HgaI GACGC 1 cut(s) 527
HhaI GCGC 1 cut(s) 728
Hin1II CATG 6 cut(s) 53, 135, 350, 451, 1003, 1059
Hin6I GCGC 1 cut(s) 726
HinP1I GCGC 1 cut(s) 726
HincII GTYRAC 2 cut(s) 163, 909
HindII GTYRAC 2 cut(s) 163, 909
HinfI GANTC 3 cut(s) 323, 377, 606
HpaI GTTAAC 1 cut(s) 163
HpaII CCGG 2 cut(s) 287, 948
HphI GGTGA 4 cut(s) 218, 454, 644, 907
Hpy166II GTNNAC 6 cut(s) 103, 163, 445, 909, 963, 1141
Hpy188I TCNGA 6 cut(s) 382, 415, 474, 652, 876, 1116
Hpy188III TCNNGA 7 cut(s) 253, 287, 347, 482, 890, 1034, 1180
Hpy8I GTNNAC 6 cut(s) 103, 163, 445, 909, 963, 1141
Hpy99I CGWCG 2 cut(s) 464, 913
HpyAV CCTTC 4 cut(s) 4, 220, 657, 1166
HpyCH4III ACNGT 3 cut(s) 597, 765, 823
HpyCH4V TGCA 9 cut(s) 56, 92, 361, 745, 963, 1003, 1021, 1069, 1121
HpyF10VI GCNNNNNNNGC 3 cut(s) 652, 723, 969
HpyF3I CTNAG 3 cut(s) 412, 473, 1089
Hsp92II CATG 6 cut(s) 53, 135, 350, 451, 1003, 1059
HspAI GCGC 1 cut(s) 726
Kpn2I TCCGGA 1 cut(s) 286
KspAI GTTAAC 1 cut(s) 163
Kzo9I GATC 4 cut(s) 343, 406, 672, 1176
LmnI GCTCC 8 cut(s) 178, 221, 255, 625, 652, 703, 877, 1078
LweI GCATC 1 cut(s) 65
MaeI CTAG 5 cut(s) 312, 692, 723, 968, 1074
MaeIII GTNAC 3 cut(s) 369, 427, 844
MalI GATC 4 cut(s) 345, 408, 674, 1178
MboI GATC 4 cut(s) 343, 406, 672, 1176
MboII GAAGA 2 cut(s) 50, 707
MfeI CAATTG 1 cut(s) 1164
MflI RGATCY 1 cut(s) 672
MhlI GDGCHC 4 cut(s) 564, 736, 965, 1105
MluCI AATT 2 cut(s) 1024, 1164
MlyI GAGTC 2 cut(s) 317, 615
MmeI TCCRAC 4 cut(s) 5, 90, 738, 1176
Mph1103I ATGCAT 1 cut(s) 1005
MroI TCCGGA 1 cut(s) 286
MseI TTAA 2 cut(s) 162, 504
MslI CAYNNNNRTG 1 cut(s) 1004
MspA1I CMGCKG 1 cut(s) 34
MspI CCGG 2 cut(s) 287, 948
MspR9I CCNGG 3 cut(s) 217, 949, 1136
MunI CAATTG 1 cut(s) 1164
Mva1269I GAATGC 1 cut(s) 1090
MvaI CCWGG 2 cut(s) 217, 1136
MvnI CGCG 2 cut(s) 1035, 1181
MwoI GCNNNNNNNGC 3 cut(s) 652, 723, 969
NciI CCSGG 1 cut(s) 949
NdeI CATATG 1 cut(s) 1005
NdeII GATC 4 cut(s) 343, 406, 672, 1176
NlaIII CATG 6 cut(s) 53, 135, 350, 451, 1003, 1059
NlaIV GGNNCC 4 cut(s) 251, 654, 873, 994
NmeAIII GCCGAG 2 cut(s) 541, 622
NmuCI GTSAC 1 cut(s) 427
NruI TCGCGA 2 cut(s) 1035, 1181
NsiI ATGCAT 1 cut(s) 1005
NspI RCATGY 2 cut(s) 135, 451
PagI TCATGA 1 cut(s) 346
PasI CCCWGGG 1 cut(s) 216
PceI AGGCCT 2 cut(s) 14, 308
PcsI WCGNNNNNNNCGW 1 cut(s) 339
PctI GAATGC 1 cut(s) 1090
PfeI GAWTC 1 cut(s) 377
PkrI GCNGC 1 cut(s) 33
PleI GAGTC 2 cut(s) 317, 614
PpsI GAGTC 2 cut(s) 317, 614
Psp6I CCWGG 2 cut(s) 215, 1134
PspEI GGTNACC 1 cut(s) 844
PspGI CCWGG 2 cut(s) 215, 1134
PspN4I GGNNCC 4 cut(s) 251, 654, 873, 994
PspPI GGNCC 2 cut(s) 797, 1126
PsuI RGATCY 1 cut(s) 672
RruI TCGCGA 2 cut(s) 1035, 1181
RsaI GTAC 1 cut(s) 332
RsaNI GTAC 1 cut(s) 331
RseI CAYNNNNRTG 1 cut(s) 1004
SalI GTCGAC 1 cut(s) 907
SaqAI TTAA 2 cut(s) 162, 504
SatI GCNGC 1 cut(s) 32
Sau3AI GATC 4 cut(s) 343, 406, 672, 1176
Sau96I GGNCC 2 cut(s) 797, 1126
SchI GAGTC 2 cut(s) 317, 615
ScrFI CCNGG 3 cut(s) 217, 949, 1136
SduI GDGCHC 4 cut(s) 564, 736, 965, 1105
SfaNI GCATC 1 cut(s) 65
SinI GGWCC 2 cut(s) 797, 1126
SmiMI CAYNNNNRTG 1 cut(s) 1004
SmlI CTYRAG 2 cut(s) 572, 890
SmoI CTYRAG 2 cut(s) 572, 890
Sse9I AATT 2 cut(s) 1024, 1164
SseBI AGGCCT 2 cut(s) 14, 308
SsiI CCGC 7 cut(s) 32, 752, 795, 839, 925, 1039, 1099
SspMI CTAG 5 cut(s) 312, 692, 723, 968, 1074
StuI AGGCCT 2 cut(s) 14, 308
StyD4I CCNGG 3 cut(s) 215, 947, 1134
StyI CCWWGG 2 cut(s) 967, 1129
TaaI ACNGT 3 cut(s) 597, 765, 823
TaqI TCGA 3 cut(s) 342, 681, 908
TasI AATT 2 cut(s) 1024, 1164
TauI GCSGC 1 cut(s) 34
TfiI GAWTC 1 cut(s) 377
Tru1I TTAA 2 cut(s) 162, 504
Tru9I TTAA 2 cut(s) 162, 504
TscAI CASTG 3 cut(s) 663, 747, 796
TseFI GTSAC 1 cut(s) 427
Tsp45I GTSAC 1 cut(s) 427
TspDTI ATGAA 2 cut(s) 1019, 1185
TspGWI ACGGA 1 cut(s) 49
TspRI CASTG 3 cut(s) 663, 747, 796
VneI GTGCAC 1 cut(s) 961
VpaK11BI GGWCC 2 cut(s) 797, 1126
XapI RAATTY 1 cut(s) 1024
XceI RCATGY 2 cut(s) 135, 451
XcmI CCANNNNNNNNNTGG 2 cut(s) 551, 1003
XmaJI CCTAGG 1 cut(s) 967
XmiI GTMKAC 1 cut(s) 908
XspI CTAG 5 cut(s) 312, 692, 723, 968, 1074
Zsp2I ATGCAT 1 cut(s) 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.