Rmu_sc0000830.1_g000026

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000830.1
OG0000075
Physical Location & Seq
Forward (+)
94951 .. 95682
732 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000830.1_g000026.1.cds

Sequence Viewer

Length: 654 bp
atggaggaatctcgtcatcgggtggtcaaggacactgttgaccccttgagagagtcaaacttggacctgactggcaagttgcagctggccgaggtccgggagcgtgacgccgagttggagctgcgtggcgccgtcttggagagtttggctccctaccctgatcgtgtggtggaattggaaggacaggttggtaccttgcacggagaagttgaccgccttagggttttcgaatgccaggctagtgagatggaggcagagttggagcaattgaggaaagagttggcggagcagcggactcgggttagtgactttgccgaagagtgccttcgactgcgagccgtcgtcgagacccacggtgataagcttaagaaggccaaacgagaaggcgcggataaggcggtggatctctatctccggttggcaccctttcaagagaagatgaataaggccttctcggatgaggccttgcactcaattcgtgaaggtatcgccgttggatggattgatcatgagaagatggtctgtgatatgcaggaaaagaaggcagcgcaattgcaagctagcgccggtagtggtggtcgaagcgttaggattgtgatccttgagccagccactgtaacagggcatgtctcgagccaatttggcgatcgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

217

Amino Acids

24.37

Weight (kDa)

5.32

Isoelectric Point (pI)

38.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 191
AccB1I GGYRCC 3 cut(s) 128, 191, 421
AccII CGCG 1 cut(s) 389
AciI CCGC 5 cut(s) 214, 284, 292, 389, 398
AclWI GGATC 2 cut(s) 411, 592
AcoI YGGCCR 1 cut(s) 87
AcyI GRCGYC 2 cut(s) 108, 129
AfaI GTAC 1 cut(s) 193
AfiI CCNNNNNNNGG 3 cut(s) 96, 220, 498
AflII CTTAAG 1 cut(s) 365
AgsI TTSAA 1 cut(s) 431
AjnI CCWGG 1 cut(s) 234
AjuI GAANNNNNNNTTGG 2 cut(s) 171, 203
AluBI AGCT 4 cut(s) 85, 121, 364, 560
AluI AGCT 4 cut(s) 85, 121, 364, 560
Alw26I GTCTC 2 cut(s) 341, 634
AlwI GGATC 2 cut(s) 411, 592
AlwNI CAGNNNCTG 1 cut(s) 614
Ama87I CYCGRG 2 cut(s) 297, 631
AoxI GGCC 4 cut(s) 87, 372, 447, 462
ApeKI GCWGC 4 cut(s) 82, 121, 289, 545
AsiSI GCGATCGC 1 cut(s) 649
Asp718I GGTACC 1 cut(s) 191
AspLEI GCGC 4 cut(s) 131, 389, 550, 566
AspS9I GGNCC 2 cut(s) 64, 94
AsuC2I CCSGG 1 cut(s) 98
AsuHPI GGTGA 1 cut(s) 368
AsuII TTCGAA 1 cut(s) 228
AsuNHI GCTAGC 1 cut(s) 560
AvaI CYCGRG 2 cut(s) 297, 631
AvaII GGWCC 2 cut(s) 64, 94
AxyI CCTNAGG 1 cut(s) 218
BanI GGYRCC 3 cut(s) 128, 191, 421
BbvI GCAGC 4 cut(s) 94, 108, 301, 557
BccI CCATC 3 cut(s) 241, 492, 511
BceAI ACGGC 3 cut(s) 116, 323, 476
BcgI CGANNNNNNTGC 4 cut(s) 278, 312, 458, 492
BciT130I CCWGG 1 cut(s) 236
BclI TGATCA 1 cut(s) 505
BcnI CCSGG 1 cut(s) 98
BcoDI GTCTC 2 cut(s) 341, 634
BfaI CTAG 3 cut(s) 240, 561, 652
BfoI RGCGCY 2 cut(s) 132, 567
BfrI CTTAAG 1 cut(s) 365
BglI GCCNNNNNGGC 1 cut(s) 642
BisI GCNGC 4 cut(s) 83, 122, 290, 546
BlsI GCNGC 4 cut(s) 84, 123, 291, 547
Bme1390I CCNGG 2 cut(s) 98, 236
Bme18I GGWCC 2 cut(s) 64, 94
BmeT110I CYCGRG 2 cut(s) 297, 631
BmgT120I GGNCC 2 cut(s) 64, 94
BmiI GGNNCC 4 cut(s) 130, 150, 193, 423
BmrFI CCNGG 2 cut(s) 98, 236
BmtI GCTAGC 1 cut(s) 564
BplI GAGNNNNNCTC 2 cut(s) 133, 165
Bpu14I TTCGAA 1 cut(s) 228
BpuEI CTTGAG 2 cut(s) 67, 623
BpuMI CCSGG 1 cut(s) 98
BsaBI GATNNNNATC 2 cut(s) 408, 596
BsaHI GRCGYC 2 cut(s) 108, 129
BsaI GGTCTC 1 cut(s) 341
BsaJI CCNNGG 2 cut(s) 90, 352
BsaWI WCCGGW 1 cut(s) 414
BsaXI ACNNNNNCTCC 2 cut(s) 242, 272
Bsc4I CCNNNNNNNGG 3 cut(s) 96, 220, 498
Bse118I RCCGGY 1 cut(s) 566
Bse1I ACTGG 1 cut(s) 76
Bse21I CCTNAGG 1 cut(s) 218
Bse8I GATNNNNATC 2 cut(s) 408, 596
BseBI CCWGG 1 cut(s) 236
BseDI CCNNGG 2 cut(s) 90, 352
BseGI GGATG 2 cut(s) 463, 503
BseJI GATNNNNATC 2 cut(s) 408, 596
BseLI CCNNNNNNNGG 3 cut(s) 96, 220, 498
BseNI ACTGG 1 cut(s) 76
BseXI GCAGC 4 cut(s) 94, 108, 301, 557
Bsh1236I CGCG 1 cut(s) 389
Bsh1285I CGRYCG 1 cut(s) 649
BshFI GGCC 4 cut(s) 89, 374, 449, 464
BshNI GGYRCC 3 cut(s) 128, 191, 421
BsiEI CGRYCG 1 cut(s) 649
BsiHKCI CYCGRG 2 cut(s) 297, 631
BsiSI CCGG 3 cut(s) 97, 415, 567
BslI CCNNNNNNNGG 3 cut(s) 96, 220, 498
BsmAI GTCTC 2 cut(s) 341, 634
BsmI GAATGC 1 cut(s) 236
BsnI GGCC 4 cut(s) 89, 374, 449, 464
Bso31I GGTCTC 1 cut(s) 341
BsoBI CYCGRG 2 cut(s) 297, 631
Bsp119I TTCGAA 1 cut(s) 228
Bsp143I GATC 5 cut(s) 160, 403, 505, 597, 646
BspACI CCGC 5 cut(s) 214, 284, 292, 389, 398
BspANI GGCC 4 cut(s) 89, 374, 449, 464
BspFNI CGCG 1 cut(s) 389
BspHI TCATGA 1 cut(s) 508
BspLI GGNNCC 4 cut(s) 130, 150, 193, 423
BspOI GCTAGC 1 cut(s) 564
BspPI GGATC 2 cut(s) 411, 592
BspT104I TTCGAA 1 cut(s) 228
BspT107I GGYRCC 3 cut(s) 128, 191, 421
BspTI CTTAAG 1 cut(s) 365
BspTNI GGTCTC 1 cut(s) 341
BsrFI RCCGGY 1 cut(s) 566
BsrI ACTGG 1 cut(s) 76
BssAI RCCGGY 1 cut(s) 566
BssECI CCNNGG 2 cut(s) 90, 352
BssMI GATC 5 cut(s) 160, 403, 505, 597, 646
BssNI GRCGYC 2 cut(s) 108, 129
Bst2UI CCWGG 1 cut(s) 236
Bst4CI ACNGT 3 cut(s) 37, 356, 616
Bst6I CTCTTC 1 cut(s) 312
BstACI GRCGYC 2 cut(s) 108, 129
BstAFI CTTAAG 1 cut(s) 365
BstBI TTCGAA 1 cut(s) 228
BstC8I GCNNGC 5 cut(s) 87, 336, 558, 562, 609
BstDEI CTNAG 1 cut(s) 218
BstDSI CCRYGG 1 cut(s) 352
BstF5I GGATG 2 cut(s) 463, 503
BstFNI CGCG 1 cut(s) 389
BstH2I RGCGCY 2 cut(s) 132, 567
BstHHI GCGC 4 cut(s) 131, 389, 550, 566
BstKTI GATC 5 cut(s) 163, 406, 508, 600, 649
BstMAI GTCTC 2 cut(s) 341, 634
BstMBI GATC 5 cut(s) 160, 403, 505, 597, 646
BstMCI CGRYCG 1 cut(s) 649
BstMWI GCNNNNNNNGC 2 cut(s) 395, 642
BstNI CCWGG 1 cut(s) 236
BstNSI RCATGY 1 cut(s) 629
BstSCI CCNGG 2 cut(s) 96, 234
BstUI CGCG 1 cut(s) 389
BstV1I GCAGC 4 cut(s) 94, 108, 301, 557
BstX2I RGATCY 1 cut(s) 403
BstYI RGATCY 1 cut(s) 403
Bsu36I CCTNAGG 1 cut(s) 218
BsuRI GGCC 4 cut(s) 89, 374, 449, 464
BtgI CCRYGG 1 cut(s) 352
BtsCI GGATG 2 cut(s) 463, 503
BtsIMutI CAGTG 2 cut(s) 33, 612
Cac8I GCNNGC 5 cut(s) 87, 336, 558, 562, 609
CaiI CAGNNNCTG 1 cut(s) 614
CciI TCATGA 1 cut(s) 508
CfoI GCGC 4 cut(s) 131, 389, 550, 566
Cfr10I RCCGGY 1 cut(s) 566
Cfr13I GGNCC 2 cut(s) 64, 94
CseI GACGC 1 cut(s) 116
Csp6I GTAC 1 cut(s) 192
CviAII CATG 2 cut(s) 509, 626
CviQI GTAC 1 cut(s) 192
DdeI CTNAG 1 cut(s) 218
DinI GGCGCC 1 cut(s) 130
DpnI GATC 5 cut(s) 162, 405, 507, 599, 648
DpnII GATC 5 cut(s) 160, 403, 505, 597, 646
EaeI YGGCCR 1 cut(s) 87
Eam1104I CTCTTC 1 cut(s) 312
EarI CTCTTC 1 cut(s) 312
EciI GGCGGA 1 cut(s) 299
Eco147I AGGCCT 2 cut(s) 449, 464
Eco31I GGTCTC 1 cut(s) 341
Eco47I GGWCC 2 cut(s) 64, 94
Eco81I CCTNAGG 1 cut(s) 218
Eco88I CYCGRG 2 cut(s) 297, 631
EcoRII CCWGG 1 cut(s) 234
EgeI GGCGCC 1 cut(s) 130
EheI GGCGCC 1 cut(s) 130
FaeI CATG 2 cut(s) 512, 629
FaiI YATR 3 cut(s) 510, 530, 627
FalI AAGNNNNNCTT 2 cut(s) 309, 341
FatI CATG 2 cut(s) 508, 625
FbaI TGATCA 1 cut(s) 505
Fnu4HI GCNGC 4 cut(s) 83, 122, 290, 546
FokI GGATG 2 cut(s) 470, 510
Fsp4HI GCNGC 4 cut(s) 83, 122, 290, 546
FspBI CTAG 3 cut(s) 240, 561, 652
GlaI GCGC 4 cut(s) 130, 388, 549, 565
GluI GCNGC 4 cut(s) 83, 122, 290, 546
HaeII RGCGCY 2 cut(s) 132, 567
HaeIII GGCC 4 cut(s) 89, 374, 449, 464
HapII CCGG 3 cut(s) 97, 415, 567
HgaI GACGC 1 cut(s) 116
HhaI GCGC 4 cut(s) 131, 389, 550, 566
Hin1I GRCGYC 2 cut(s) 108, 129
Hin1II CATG 2 cut(s) 512, 629
Hin6I GCGC 4 cut(s) 129, 387, 548, 564
HinP1I GCGC 4 cut(s) 129, 387, 548, 564
HincII GTYRAC 2 cut(s) 40, 211
HindII GTYRAC 2 cut(s) 40, 211
HindIII AAGCTT 1 cut(s) 362
HinfI GANTC 3 cut(s) 8, 53, 295
HpaII CCGG 3 cut(s) 97, 415, 567
HphI GGTGA 1 cut(s) 368
Hpy166II GTNNAC 2 cut(s) 40, 211
Hpy188I TCNGA 1 cut(s) 457
Hpy188III TCNNGA 5 cut(s) 346, 431, 479, 509, 631
Hpy8I GTNNAC 2 cut(s) 40, 211
Hpy99I CGWCG 2 cut(s) 344, 347
HpyAV CCTTC 7 cut(s) 173, 335, 364, 377, 460, 476, 535
HpyCH4III ACNGT 3 cut(s) 37, 356, 616
HpyCH4V TGCA 5 cut(s) 82, 199, 469, 532, 556
HpyF10VI GCNNNNNNNGC 2 cut(s) 395, 642
HpyF3I CTNAG 1 cut(s) 218
Hsp92I GRCGYC 2 cut(s) 108, 129
Hsp92II CATG 2 cut(s) 512, 629
HspAI GCGC 4 cut(s) 129, 387, 548, 564
KasI GGCGCC 1 cut(s) 128
KpnI GGTACC 1 cut(s) 195
Ksp22I TGATCA 1 cut(s) 505
Kzo9I GATC 5 cut(s) 160, 403, 505, 597, 646
LmnI GCTCC 5 cut(s) 100, 118, 154, 262, 286
Lsp1109I GCAGC 4 cut(s) 94, 108, 301, 557
MaeI CTAG 3 cut(s) 240, 561, 652
MaeIII GTNAC 3 cut(s) 104, 305, 616
MalI GATC 5 cut(s) 162, 405, 507, 599, 648
MboI GATC 5 cut(s) 160, 403, 505, 597, 646
MboII GAAGA 3 cut(s) 329, 448, 526
MfeI CAATTG 2 cut(s) 266, 551
MflI RGATCY 1 cut(s) 403
MluCI AATT 5 cut(s) 173, 266, 474, 551, 638
Mly113I GGCGCC 1 cut(s) 129
MlyI GAGTC 2 cut(s) 62, 289
MmeI TCCRAC 3 cut(s) 96, 240, 475
MnlI CCTC 4 cut(s) 85, 244, 264, 454
MseI TTAA 1 cut(s) 366
MspA1I CMGCKG 2 cut(s) 85, 292
MspCI CTTAAG 1 cut(s) 365
MspI CCGG 3 cut(s) 97, 415, 567
MspR9I CCNGG 2 cut(s) 98, 236
MunI CAATTG 2 cut(s) 266, 551
Mva1269I GAATGC 1 cut(s) 236
MvaI CCWGG 1 cut(s) 236
MvnI CGCG 1 cut(s) 389
MwoI GCNNNNNNNGC 2 cut(s) 395, 642
NarI GGCGCC 1 cut(s) 129
NciI CCSGG 1 cut(s) 98
NdeII GATC 5 cut(s) 160, 403, 505, 597, 646
NheI GCTAGC 1 cut(s) 560
NlaIII CATG 2 cut(s) 512, 629
NlaIV GGNNCC 4 cut(s) 130, 150, 193, 423
NmeAIII GCCGAG 2 cut(s) 115, 136
NmuCI GTSAC 2 cut(s) 104, 305
NspI RCATGY 1 cut(s) 629
NspV TTCGAA 1 cut(s) 228
PaeR7I CTCGAG 1 cut(s) 631
PagI TCATGA 1 cut(s) 508
PceI AGGCCT 2 cut(s) 449, 464
PctI GAATGC 1 cut(s) 236
PfeI GAWTC 1 cut(s) 8
PfoI TCCNGGA 1 cut(s) 96
PkrI GCNGC 4 cut(s) 84, 123, 291, 547
Ple19I CGATCG 1 cut(s) 649
PleI GAGTC 2 cut(s) 61, 289
PluTI GGCGCC 1 cut(s) 132
PpsI GAGTC 2 cut(s) 61, 289
Psp6I CCWGG 1 cut(s) 234
PspGI CCWGG 1 cut(s) 234
PspN4I GGNNCC 4 cut(s) 130, 150, 193, 423
PspPI GGNCC 2 cut(s) 64, 94
PstNI CAGNNNCTG 1 cut(s) 614
PsuI RGATCY 1 cut(s) 403
PvuI CGATCG 1 cut(s) 649
PvuII CAGCTG 1 cut(s) 85
RgaI GCGATCGC 1 cut(s) 649
RsaI GTAC 1 cut(s) 193
RsaNI GTAC 1 cut(s) 192
SaqAI TTAA 1 cut(s) 366
SatI GCNGC 4 cut(s) 83, 122, 290, 546
Sau3AI GATC 5 cut(s) 160, 403, 505, 597, 646
Sau96I GGNCC 2 cut(s) 64, 94
SchI GAGTC 2 cut(s) 62, 289
ScrFI CCNGG 2 cut(s) 98, 236
SetI ASST 9 cut(s) 69, 87, 96, 123, 189, 197, 366, 487, 562
SfaAI GCGATCGC 1 cut(s) 649
SfoI GGCGCC 1 cut(s) 130
Sfr274I CTCGAG 1 cut(s) 631
SfuI TTCGAA 1 cut(s) 228
SgfI GCGATCGC 1 cut(s) 649
SinI GGWCC 2 cut(s) 64, 94
SlaI CTCGAG 1 cut(s) 631
SmlI CTYRAG 4 cut(s) 46, 365, 602, 631
SmoI CTYRAG 4 cut(s) 46, 365, 602, 631
Sse9I AATT 5 cut(s) 173, 266, 474, 551, 638
SseBI AGGCCT 2 cut(s) 449, 464
SsiI CCGC 5 cut(s) 214, 284, 292, 389, 398
SspDI GGCGCC 1 cut(s) 128
SspMI CTAG 3 cut(s) 240, 561, 652
StuI AGGCCT 2 cut(s) 449, 464
StyD4I CCNGG 2 cut(s) 96, 234
TaaI ACNGT 3 cut(s) 37, 356, 616
TaqI TCGA 5 cut(s) 228, 328, 345, 580, 632
TasI AATT 5 cut(s) 173, 266, 474, 551, 638
TfiI GAWTC 1 cut(s) 8
Tru1I TTAA 1 cut(s) 366
Tru9I TTAA 1 cut(s) 366
TscAI CASTG 2 cut(s) 40, 619
TseFI GTSAC 2 cut(s) 104, 305
TseI GCWGC 4 cut(s) 82, 121, 289, 545
Tsp45I GTSAC 2 cut(s) 104, 305
TspDTI ATGAA 1 cut(s) 455
TspGWI ACGGA 1 cut(s) 216
TspRI CASTG 2 cut(s) 40, 619
Vha464I CTTAAG 1 cut(s) 365
VpaK11BI GGWCC 2 cut(s) 64, 94
XceI RCATGY 1 cut(s) 629
XhoI CTCGAG 1 cut(s) 631
XspI CTAG 3 cut(s) 240, 561, 652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.