Rmu_sc0006287.1_g000004

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006287.1
OG0000075
Physical Location & Seq
Forward (+)
10956 .. 13769
2814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006287.1_g000004.1.cds

Sequence Viewer

Length: 1317 bp
atgccgaacgacgctcctagtaagagcgacgcccagtatgccgatgtcaattccgttaccattattgaggggttgttgcgagaatcggagacagcgaggtgggttgatgttgatatactagataatgtgctcgtaactgatcatcgggtgaacatgctgttgccagacgagcgagctgaggaagaggccggtgtcgaagggcatgaggctcaagatgctcttgaaccggcgcaaaatccccaggggccaccaatgtacgtgggtgaagtgggcgaccgccctcaagttcatgttggtgggcaccaatcccctgagactagagaggtggagagacagtcccccctggtctcggcaggaggggtggatcttggtgatgtggctcgggtcttggaactgacggttaaagtggagatctccgttgaggagttgttggaagaggtagagcggcgtcaaagcgataccagcgcccgtgctcttttggtgcaagacgcagtgttggaacagctagatgctgtctttggcaaggacgttggtgctccgatcttgcgggaggtcatcattgttgacagtggggaggcggaggtgaccagccaggccgtgggagagacaagtctggctgtcgaagctcttgaggtgcaacccgagtctgtaaaggacgtggtcgaagaaaaggaatgccttgcagttacgtctcgtagtcccccagttggtgttggcatcgatactcgtgataaggttgccgggggtctggcgtgcaccctgggagagattggaattactgatggtgccatccttcatatggtttccggcttgcggaactgtcattgcgaccgcagtcgcgtgaatgctgaagacccatgcctggggtatcgggaggctcaggagaggttgatgaggtctgtgaatatgaattaccatgcctctggagagttggtagctcaatttgattgggagatagcccggctgcagggggagctgaatgccaagagggagcgggcggatcgcgaagaggatggagctggagcgatcatttgccatggaggaggctcgttgccaagaggccgagggtgtcatcgctccgctgagggaggccaacttggatctgaccgggaggctgcaaaatgggtggaggatggcttgaaggcggtggatcaggttaaggctcggattagcgaggctaaggaggtcctacaagagttggaaaggaaagttggtactctgcaaagagaagttgatcgtttacgagactttgagctcgaggctggcgagaaggaggcaaagatggacagactaaggaaggagttagctgagcagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

438

Amino Acids

47.7

Weight (kDa)

4.62

Isoelectric Point (pI)

48.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 300, 785
AccB7I CCANNNNNTGG 1 cut(s) 598
AccBSI CCGCTC 2 cut(s) 445, 994
AccII CGCG 2 cut(s) 840, 1005
AclWI GGATC 4 cut(s) 372, 1008, 1108, 1158
AcuI CTGAAG 1 cut(s) 870
AcyI GRCGYC 2 cut(s) 30, 448
AfaI GTAC 2 cut(s) 257, 1216
AfiI CCNNNNNNNGG 8 cut(s) 349, 598, 707, 799, 813, 862, 863, 967
AgsI TTSAA 2 cut(s) 224, 1141
AjiI CACGTC 1 cut(s) 658
AjnI CCWGG 5 cut(s) 240, 342, 591, 759, 861
AjuI GAANNNNNNNTTGG 2 cut(s) 1194, 1226
AluBI AGCT 8 cut(s) 176, 505, 626, 938, 976, 1019, 1255, 1307
AluI AGCT 8 cut(s) 176, 505, 626, 938, 976, 1019, 1255, 1307
Alw21I GWGCWC 5 cut(s) 132, 475, 538, 758, 1257
Alw26I GTCTC 7 cut(s) 83, 308, 325, 352, 599, 696, 1239
Alw44I GTGCAC 1 cut(s) 754
AlwI GGATC 4 cut(s) 372, 1008, 1108, 1158
Ama87I CYCGRG 3 cut(s) 381, 641, 1256
AoxI GGCC 5 cut(s) 186, 245, 594, 1060, 1090
ApaLI GTGCAC 1 cut(s) 754
ApeKI GCWGC 2 cut(s) 964, 1115
AspLEI GCGC 2 cut(s) 232, 467
AspS9I GGNCC 2 cut(s) 245, 1186
AsuC2I CCSGG 3 cut(s) 742, 961, 1109
AsuHPI GGTGA 4 cut(s) 160, 275, 383, 595
AvaI CYCGRG 3 cut(s) 381, 641, 1256
AvaII GGWCC 1 cut(s) 1186
BaeGI GKGCMC 2 cut(s) 303, 758
BanI GGYRCC 2 cut(s) 300, 785
BanII GRGCYC 1 cut(s) 1257
BauI CACGAG 1 cut(s) 726
BbsI GAAGAC 1 cut(s) 858
Bbv12I GWGCWC 5 cut(s) 132, 475, 538, 758, 1257
BbvCI CCTCAGC 2 cut(s) 177, 1083
BbvI GCAGC 2 cut(s) 951, 1102
BccI CCATC 5 cut(s) 776, 797, 1007, 1127, 1276
BceAI ACGGC 1 cut(s) 581
BciT130I CCWGG 5 cut(s) 242, 344, 593, 761, 863
BclI TGATCA 1 cut(s) 139
BcnI CCSGG 3 cut(s) 742, 961, 1109
BcoDI GTCTC 7 cut(s) 83, 308, 325, 352, 599, 696, 1239
BfaI CTAG 4 cut(s) 18, 119, 318, 506
BfmI CTRYAG 1 cut(s) 965
BfoI RGCGCY 1 cut(s) 468
BglII AGATCT 1 cut(s) 411
BisI GCNGC 3 cut(s) 446, 965, 1116
BlpI GCTNAGC 1 cut(s) 1308
BlsI GCNGC 3 cut(s) 447, 966, 1117
Bme1390I CCNGG 8 cut(s) 242, 344, 593, 742, 761, 863, 961, 1109
Bme18I GGWCC 1 cut(s) 1186
BmeT110I CYCGRG 3 cut(s) 381, 641, 1256
BmgBI CACGTC 1 cut(s) 658
BmgT120I GGNCC 2 cut(s) 245, 1186
BmiI GGNNCC 3 cut(s) 246, 302, 787
BmrFI CCNGG 8 cut(s) 242, 344, 593, 742, 761, 863, 961, 1109
BmrI ACTGGG 2 cut(s) 28, 698
BmsI GCATC 3 cut(s) 205, 499, 726
BmuI ACTGGG 2 cut(s) 28, 698
BoxI GACNNNNGTC 1 cut(s) 834
BpiI GAAGAC 1 cut(s) 858
BpmI CTGGAG 2 cut(s) 945, 1041
Bpu10I CCTNAGC 4 cut(s) 177, 879, 1083, 1179
Bpu1102I GCTNAGC 1 cut(s) 1308
BpuEI CTTGAG 3 cut(s) 195, 267, 650
BpuMI CCSGG 3 cut(s) 742, 961, 1109
Bsa29I ATCGAT 1 cut(s) 720
BsaAI YACGTR 1 cut(s) 259
BsaHI GRCGYC 2 cut(s) 30, 448
BsaI GGTCTC 1 cut(s) 352
BsaXI ACNNNNNCTCC 4 cut(s) 320, 350, 918, 948
Bsc4I CCNNNNNNNGG 8 cut(s) 349, 598, 707, 799, 813, 862, 863, 967
Bse118I RCCGGY 2 cut(s) 188, 226
Bse1I ACTGG 2 cut(s) 34, 704
Bse3DI GCAATG 1 cut(s) 823
BseBI CCWGG 5 cut(s) 242, 344, 593, 761, 863
BseCI ATCGAT 1 cut(s) 720
BseGI GGATG 3 cut(s) 789, 1018, 1138
BseLI CCNNNNNNNGG 8 cut(s) 349, 598, 707, 799, 813, 862, 863, 967
BseMI GCAATG 1 cut(s) 823
BseMII CTCAG 5 cut(s) 168, 303, 893, 1074, 1299
BseNI ACTGG 2 cut(s) 34, 704
BseRI GAGGAG 2 cut(s) 437, 1056
BseSI GKGCMC 2 cut(s) 303, 758
BseXI GCAGC 2 cut(s) 951, 1102
Bsh1236I CGCG 2 cut(s) 840, 1005
Bsh1285I CGRYCG 2 cut(s) 277, 832
BshFI GGCC 5 cut(s) 188, 247, 596, 1062, 1092
BshNI GGYRCC 2 cut(s) 300, 785
BshVI ATCGAT 1 cut(s) 720
BsiEI CGRYCG 2 cut(s) 277, 832
BsiHKAI GWGCWC 5 cut(s) 132, 475, 538, 758, 1257
BsiHKCI CYCGRG 3 cut(s) 381, 641, 1256
BsiSI CCGG 6 cut(s) 189, 227, 741, 807, 961, 1108
BslFI GGGAC 2 cut(s) 322, 684
BslI CCNNNNNNNGG 8 cut(s) 349, 598, 707, 799, 813, 862, 863, 967
BsmAI GTCTC 7 cut(s) 83, 308, 325, 352, 599, 696, 1239
BsmBI CGTCTC 1 cut(s) 696
BsmFI GGGAC 2 cut(s) 322, 684
BsmI GAATGC 3 cut(s) 680, 850, 985
BsnI GGCC 5 cut(s) 188, 247, 596, 1062, 1092
Bso31I GGTCTC 1 cut(s) 352
BsoBI CYCGRG 3 cut(s) 381, 641, 1256
Bsp1286I GDGCHC 6 cut(s) 132, 303, 475, 538, 758, 1257
Bsp143I GATC 9 cut(s) 139, 364, 411, 540, 1000, 1026, 1100, 1150, 1234
Bsp1720I GCTNAGC 1 cut(s) 1308
Bsp19I CCATGG 1 cut(s) 1036
Bsp68I TCGCGA 1 cut(s) 1005
BspANI GGCC 5 cut(s) 188, 247, 596, 1062, 1092
BspCNI CTCAG 5 cut(s) 169, 304, 892, 1075, 1300
BspDI ATCGAT 1 cut(s) 720
BspFNI CGCG 2 cut(s) 840, 1005
BspLI GGNNCC 3 cut(s) 246, 302, 787
BspMAI CTGCAG 1 cut(s) 969
BspPI GGATC 4 cut(s) 372, 1008, 1108, 1158
BspT107I GGYRCC 2 cut(s) 300, 785
BspTNI GGTCTC 1 cut(s) 352
BsrBI CCGCTC 2 cut(s) 445, 994
BsrDI GCAATG 1 cut(s) 823
BsrFI RCCGGY 2 cut(s) 188, 226
BsrI ACTGG 2 cut(s) 34, 704
BssAI RCCGGY 2 cut(s) 188, 226
BssMI GATC 9 cut(s) 139, 364, 411, 540, 1000, 1026, 1100, 1150, 1234
BssNI GRCGYC 2 cut(s) 30, 448
BssSI CACGAG 1 cut(s) 726
BssT1I CCWWGG 1 cut(s) 1036
Bst2BI CACGAG 1 cut(s) 726
Bst2UI CCWGG 5 cut(s) 242, 344, 593, 761, 863
Bst4CI ACNGT 4 cut(s) 336, 400, 569, 821
Bst6I CTCTTC 3 cut(s) 177, 429, 1002
BstACI GRCGYC 2 cut(s) 30, 448
BstBAI YACGTR 1 cut(s) 259
BstC8I GCNNGC 5 cut(s) 174, 754, 812, 996, 1264
BstDEI CTNAG 7 cut(s) 177, 312, 879, 1083, 1179, 1292, 1308
BstDSI CCRYGG 2 cut(s) 597, 1036
BstEII GGTNACC 1 cut(s) 583
BstF5I GGATG 3 cut(s) 789, 1018, 1138
BstFNI CGCG 2 cut(s) 840, 1005
BstH2I RGCGCY 1 cut(s) 468
BstHHI GCGC 2 cut(s) 232, 467
BstKTI GATC 9 cut(s) 142, 367, 414, 543, 1003, 1029, 1103, 1153, 1237
BstMAI GTCTC 7 cut(s) 83, 308, 325, 352, 599, 696, 1239
BstMBI GATC 9 cut(s) 139, 364, 411, 540, 1000, 1026, 1100, 1150, 1234
BstMCI CGRYCG 2 cut(s) 277, 832
BstMWI GCNNNNNNNGC 6 cut(s) 38, 169, 215, 462, 623, 973
BstNI CCWGG 5 cut(s) 242, 344, 593, 761, 863
BstNSI RCATGY 1 cut(s) 157
BstPAI GACNNNNGTC 1 cut(s) 834
BstPI GGTNACC 1 cut(s) 583
BstSCI CCNGG 8 cut(s) 240, 342, 591, 740, 759, 861, 959, 1107
BstSFI CTRYAG 1 cut(s) 965
BstSLI GKGCMC 2 cut(s) 303, 758
BstUI CGCG 2 cut(s) 840, 1005
BstV1I GCAGC 2 cut(s) 951, 1102
BstV2I GAAGAC 1 cut(s) 858
BstX2I RGATCY 3 cut(s) 364, 411, 1100
BstXI CCANNNNNNTGG 1 cut(s) 923
BstYI RGATCY 3 cut(s) 364, 411, 1100
Bsu15I ATCGAT 1 cut(s) 720
BsuRI GGCC 5 cut(s) 188, 247, 596, 1062, 1092
BsuTUI ATCGAT 1 cut(s) 720
BtgI CCRYGG 2 cut(s) 597, 1036
BtgZI GCGATG 1 cut(s) 1058
BtrI CACGTC 1 cut(s) 658
BtsCI GGATG 3 cut(s) 789, 1018, 1138
BtsI GCAGTG 1 cut(s) 498
BtsIMutI CAGTG 2 cut(s) 498, 574
BtuMI TCGCGA 1 cut(s) 1005
Cac8I GCNNGC 5 cut(s) 174, 754, 812, 996, 1264
CfoI GCGC 2 cut(s) 232, 467
Cfr10I RCCGGY 2 cut(s) 188, 226
Cfr13I GGNCC 2 cut(s) 245, 1186
ClaI ATCGAT 1 cut(s) 720
CseI GACGC 4 cut(s) 20, 38, 437, 497
Csp6I GTAC 2 cut(s) 256, 1215
CspCI CAANNNNNGTGG 4 cut(s) 240, 275, 1107, 1142
CviAII CATG 6 cut(s) 154, 203, 290, 858, 917, 1037
CviQI GTAC 2 cut(s) 256, 1215
DdeI CTNAG 7 cut(s) 177, 312, 879, 1083, 1179, 1292, 1308
DpnI GATC 9 cut(s) 141, 366, 413, 542, 1002, 1028, 1102, 1152, 1236
DpnII GATC 9 cut(s) 139, 364, 411, 540, 1000, 1026, 1100, 1150, 1234
Eam1104I CTCTTC 3 cut(s) 177, 429, 1002
EarI CTCTTC 3 cut(s) 177, 429, 1002
EciI GGCGGA 2 cut(s) 593, 1013
Ecl136II GAGCTC 1 cut(s) 1255
Eco130I CCWWGG 1 cut(s) 1036
Eco24I GRGCYC 1 cut(s) 1257
Eco31I GGTCTC 1 cut(s) 352
Eco47I GGWCC 1 cut(s) 1186
Eco53kI GAGCTC 1 cut(s) 1255
Eco57I CTGAAG 1 cut(s) 870
Eco88I CYCGRG 3 cut(s) 381, 641, 1256
Eco91I GGTNACC 1 cut(s) 583
EcoICRI GAGCTC 1 cut(s) 1255
EcoO109I RGGNCCY 1 cut(s) 1186
EcoO65I GGTNACC 1 cut(s) 583
EcoRII CCWGG 5 cut(s) 240, 342, 591, 759, 861
EcoT14I CCWWGG 1 cut(s) 1036
EcoT38I GRGCYC 1 cut(s) 1257
ErhI CCWWGG 1 cut(s) 1036
Esp3I CGTCTC 1 cut(s) 696
FaeI CATG 6 cut(s) 157, 206, 293, 861, 920, 1040
FalI AAGNNNNNCTT 2 cut(s) 204, 236
FaqI GGGAC 2 cut(s) 322, 684
FatI CATG 6 cut(s) 153, 202, 289, 857, 916, 1036
FauI CCCGC 2 cut(s) 540, 987
FauNDI CATATG 1 cut(s) 798
FbaI TGATCA 1 cut(s) 139
Fnu4HI GCNGC 3 cut(s) 446, 965, 1116
FokI GGATG 3 cut(s) 776, 1025, 1145
FriOI GRGCYC 1 cut(s) 1257
Fsp4HI GCNGC 3 cut(s) 446, 965, 1116
FspBI CTAG 4 cut(s) 18, 119, 318, 506
GlaI GCGC 2 cut(s) 231, 466
GluI GCNGC 3 cut(s) 446, 965, 1116
GsuI CTGGAG 2 cut(s) 945, 1041
HaeII RGCGCY 1 cut(s) 468
HaeIII GGCC 5 cut(s) 188, 247, 596, 1062, 1092
HapII CCGG 6 cut(s) 189, 227, 741, 807, 961, 1108
HgaI GACGC 4 cut(s) 20, 38, 437, 497
HhaI GCGC 2 cut(s) 232, 467
Hin1I GRCGYC 2 cut(s) 30, 448
Hin1II CATG 6 cut(s) 157, 206, 293, 861, 920, 1040
Hin6I GCGC 2 cut(s) 230, 465
HinP1I GCGC 2 cut(s) 230, 465
HincII GTYRAC 1 cut(s) 565
HindII GTYRAC 1 cut(s) 565
HinfI GANTC 2 cut(s) 83, 644
HpaII CCGG 6 cut(s) 189, 227, 741, 807, 961, 1108
HphI GGTGA 4 cut(s) 160, 275, 383, 595
Hpy166II GTNNAC 4 cut(s) 151, 565, 756, 1241
Hpy188I TCNGA 4 cut(s) 88, 540, 1105, 1167
Hpy188III TCNNGA 8 cut(s) 212, 221, 629, 728, 872, 881, 924, 1004
Hpy8I GTNNAC 4 cut(s) 151, 565, 756, 1241
Hpy99I CGWCG 2 cut(s) 14, 32
HpyAV CCTTC 5 cut(s) 191, 803, 1135, 1264, 1291
HpyCH4III ACNGT 4 cut(s) 336, 400, 569, 821
HpyCH4IV ACGT 4 cut(s) 258, 528, 657, 689
HpyCH4V TGCA 7 cut(s) 484, 637, 683, 756, 967, 1118, 1222
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 169, 215, 462, 623, 973
HpyF3I CTNAG 7 cut(s) 177, 312, 879, 1083, 1179, 1292, 1308
HpySE526I ACGT 4 cut(s) 258, 528, 657, 689
Hsp92I GRCGYC 2 cut(s) 30, 448
Hsp92II CATG 6 cut(s) 157, 206, 293, 861, 920, 1040
HspAI GCGC 2 cut(s) 230, 465
Ksp22I TGATCA 1 cut(s) 139
Kzo9I GATC 9 cut(s) 139, 364, 411, 540, 1000, 1026, 1100, 1150, 1234
LmnI GCTCC 7 cut(s) 19, 541, 973, 991, 1016, 1022, 1082
Lsp1109I GCAGC 2 cut(s) 951, 1102
LweI GCATC 3 cut(s) 205, 499, 726
MaeI CTAG 4 cut(s) 18, 119, 318, 506
MaeII ACGT 4 cut(s) 258, 528, 657, 689
MaeIII GTNAC 4 cut(s) 55, 133, 583, 685
MalI GATC 9 cut(s) 141, 366, 413, 542, 1002, 1028, 1102, 1152, 1236
MbiI CCGCTC 2 cut(s) 445, 994
MboI GATC 9 cut(s) 139, 364, 411, 540, 1000, 1026, 1100, 1150, 1234
MboII GAAGA 5 cut(s) 194, 446, 677, 863, 1019
MflI RGATCY 3 cut(s) 364, 411, 1100
MhlI GDGCHC 6 cut(s) 132, 303, 475, 538, 758, 1257
MluCI AATT 4 cut(s) 49, 774, 910, 941
MlyI GAGTC 1 cut(s) 653
MmeI TCCRAC 3 cut(s) 411, 477, 1179
MseI TTAA 2 cut(s) 402, 1158
MslI CAYNNNNRTG 1 cut(s) 294
MspA1I CMGCKG 1 cut(s) 1082
MspI CCGG 6 cut(s) 189, 227, 741, 807, 961, 1108
MspR9I CCNGG 8 cut(s) 242, 344, 593, 742, 761, 863, 961, 1109
Mva1269I GAATGC 3 cut(s) 680, 850, 985
MvaI CCWGG 5 cut(s) 242, 344, 593, 761, 863
MvnI CGCG 2 cut(s) 840, 1005
MwoI GCNNNNNNNGC 6 cut(s) 38, 169, 215, 462, 623, 973
NciI CCSGG 3 cut(s) 742, 961, 1109
NcoI CCATGG 1 cut(s) 1036
NdeI CATATG 1 cut(s) 798
NdeII GATC 9 cut(s) 139, 364, 411, 540, 1000, 1026, 1100, 1150, 1234
NlaIII CATG 6 cut(s) 157, 206, 293, 861, 920, 1040
NlaIV GGNNCC 3 cut(s) 246, 302, 787
NmeAIII GCCGAG 2 cut(s) 329, 1088
NmuCI GTSAC 1 cut(s) 583
NruI TCGCGA 1 cut(s) 1005
NspI RCATGY 1 cut(s) 157
PaeR7I CTCGAG 1 cut(s) 1256
PasI CCCWGGG 2 cut(s) 241, 760
PcsI WCGNNNNNNNCGW 2 cut(s) 92, 1263
PctI GAATGC 3 cut(s) 680, 850, 985
PfeI GAWTC 1 cut(s) 83
PflFI GACNNNGTC 1 cut(s) 659
PflMI CCANNNNNTGG 1 cut(s) 598
PkrI GCNGC 3 cut(s) 447, 966, 1117
PleI GAGTC 1 cut(s) 652
PpsI GAGTC 1 cut(s) 652
Ppu21I YACGTR 1 cut(s) 259
PpuMI RGGWCCY 1 cut(s) 1186
PshAI GACNNNNGTC 1 cut(s) 834
Psp124BI GAGCTC 1 cut(s) 1257
Psp5II RGGWCCY 1 cut(s) 1186
Psp6I CCWGG 5 cut(s) 240, 342, 591, 759, 861
PspEI GGTNACC 1 cut(s) 583
PspGI CCWGG 5 cut(s) 240, 342, 591, 759, 861
PspN4I GGNNCC 3 cut(s) 246, 302, 787
PspPI GGNCC 2 cut(s) 245, 1186
PspPPI RGGWCCY 1 cut(s) 1186
PspXI VCTCGAGB 1 cut(s) 1256
PstI CTGCAG 1 cut(s) 969
PsuI RGATCY 3 cut(s) 364, 411, 1100
PsyI GACNNNGTC 1 cut(s) 659
RruI TCGCGA 1 cut(s) 1005
RsaI GTAC 2 cut(s) 257, 1216
RsaNI GTAC 2 cut(s) 256, 1215
RseI CAYNNNNRTG 1 cut(s) 294
SacI GAGCTC 1 cut(s) 1257
SaqAI TTAA 2 cut(s) 402, 1158
SatI GCNGC 3 cut(s) 446, 965, 1116
Sau3AI GATC 9 cut(s) 139, 364, 411, 540, 1000, 1026, 1100, 1150, 1234
Sau96I GGNCC 2 cut(s) 245, 1186
SchI GAGTC 1 cut(s) 653
ScrFI CCNGG 8 cut(s) 242, 344, 593, 742, 761, 863, 961, 1109
SduI GDGCHC 6 cut(s) 132, 303, 475, 538, 758, 1257
SfaNI GCATC 3 cut(s) 205, 499, 726
SfcI CTRYAG 1 cut(s) 965
Sfr274I CTCGAG 1 cut(s) 1256
SinI GGWCC 1 cut(s) 1186
SlaI CTCGAG 1 cut(s) 1256
SmiMI CAYNNNNRTG 1 cut(s) 294
SmlI CTYRAG 4 cut(s) 210, 282, 629, 1256
SmoI CTYRAG 4 cut(s) 210, 282, 629, 1256
Sse9I AATT 4 cut(s) 49, 774, 910, 941
SspMI CTAG 4 cut(s) 18, 119, 318, 506
SstI GAGCTC 1 cut(s) 1257
StyD4I CCNGG 8 cut(s) 240, 342, 591, 740, 759, 861, 959, 1107
StyI CCWWGG 1 cut(s) 1036
TaaI ACNGT 4 cut(s) 336, 400, 569, 821
TaiI ACGT 4 cut(s) 261, 531, 660, 692
TaqI TCGA 5 cut(s) 195, 621, 663, 720, 1257
TasI AATT 4 cut(s) 49, 774, 910, 941
TauI GCSGC 1 cut(s) 448
TfiI GAWTC 1 cut(s) 83
Tru1I TTAA 2 cut(s) 402, 1158
Tru9I TTAA 2 cut(s) 402, 1158
TscAI CASTG 2 cut(s) 498, 574
TseFI GTSAC 1 cut(s) 583
TseI GCWGC 2 cut(s) 964, 1115
Tsp45I GTSAC 1 cut(s) 583
TspDTI ATGAA 3 cut(s) 278, 785, 923
TspGWI ACGGA 2 cut(s) 43, 406
TspRI CASTG 2 cut(s) 498, 574
Tth111I GACNNNGTC 1 cut(s) 659
Van91I CCANNNNNTGG 1 cut(s) 598
VneI GTGCAC 1 cut(s) 754
VpaK11BI GGWCC 1 cut(s) 1186
XceI RCATGY 1 cut(s) 157
XcmI CCANNNNNNNNNTGG 2 cut(s) 595, 796
XhoI CTCGAG 1 cut(s) 1256
XspI CTAG 4 cut(s) 18, 119, 318, 506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.