Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 99, 150 |
| AcoI | YGGCCR | 1 cut(s) | 67 |
| AcsI | RAATTY | 1 cut(s) | 311 |
| AfaI | GTAC | 2 cut(s) | 20, 141 |
| AgsI | TTSAA | 2 cut(s) | 202, 365 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 65, 97 |
| AluBI | AGCT | 2 cut(s) | 81, 107 |
| AluI | AGCT | 2 cut(s) | 81, 107 |
| AoxI | GGCC | 3 cut(s) | 67, 225, 288 |
| ApoI | RAATTY | 1 cut(s) | 311 |
| AspS9I | GGNCC | 2 cut(s) | 225, 289 |
| AsuC2I | CCSGG | 1 cut(s) | 39 |
| AsuHPI | GGTGA | 4 cut(s) | 15, 56, 113, 146 |
| BccI | CCATC | 3 cut(s) | 2, 41, 125 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 250, 284 |
| BcnI | CCSGG | 1 cut(s) | 39 |
| BfaI | CTAG | 1 cut(s) | 87 |
| BfmI | CTRYAG | 1 cut(s) | 294 |
| Bme1390I | CCNGG | 1 cut(s) | 39 |
| BmgT120I | GGNCC | 2 cut(s) | 225, 289 |
| BmiI | GGNNCC | 1 cut(s) | 291 |
| BmrFI | CCNGG | 1 cut(s) | 39 |
| BmsI | GCATC | 1 cut(s) | 270 |
| BpuMI | CCSGG | 1 cut(s) | 39 |
| BsaAI | YACGTR | 1 cut(s) | 143 |
| BseGI | GGATG | 2 cut(s) | 13, 264 |
| BseMII | CTCAG | 1 cut(s) | 155 |
| BshFI | GGCC | 3 cut(s) | 69, 227, 290 |
| BsiSI | CCGG | 2 cut(s) | 38, 70 |
| BsnI | GGCC | 3 cut(s) | 69, 227, 290 |
| BspACI | CCGC | 2 cut(s) | 99, 150 |
| BspANI | GGCC | 3 cut(s) | 69, 227, 290 |
| BspCNI | CTCAG | 1 cut(s) | 156 |
| BspLI | GGNNCC | 1 cut(s) | 291 |
| Bst4CI | ACNGT | 3 cut(s) | 27, 217, 298 |
| BstBAI | YACGTR | 1 cut(s) | 143 |
| BstC8I | GCNNGC | 1 cut(s) | 148 |
| BstDEI | CTNAG | 1 cut(s) | 164 |
| BstF5I | GGATG | 2 cut(s) | 13, 264 |
| BstSCI | CCNGG | 1 cut(s) | 37 |
| BstSFI | CTRYAG | 1 cut(s) | 294 |
| BsuRI | GGCC | 3 cut(s) | 69, 227, 290 |
| BtgZI | GCGATG | 1 cut(s) | 144 |
| BtsCI | GGATG | 2 cut(s) | 13, 264 |
| BtsI | GCAGTG | 1 cut(s) | 379 |
| BtsIMutI | CAGTG | 2 cut(s) | 213, 379 |
| Cac8I | GCNNGC | 1 cut(s) | 148 |
| Cfr13I | GGNCC | 2 cut(s) | 225, 289 |
| CseI | GACGC | 1 cut(s) | 269 |
| Csp6I | GTAC | 2 cut(s) | 19, 140 |
| CviAII | CATG | 7 cut(s) | 13, 95, 208, 222, 229, 251, 396 |
| CviJI | RGCY | 8 cut(s) | 32, 51, 69, 81, 86, 107, 227, 290 |
| CviKI_1 | RGCY | 8 cut(s) | 32, 51, 69, 81, 86, 107, 227, 290 |
| CviQI | GTAC | 2 cut(s) | 19, 140 |
| DdeI | CTNAG | 1 cut(s) | 164 |
| EaeI | YGGCCR | 1 cut(s) | 67 |
| EcoO109I | RGGNCCY | 1 cut(s) | 289 |
| EcoRI | GAATTC | 1 cut(s) | 311 |
| FaeI | CATG | 7 cut(s) | 16, 98, 211, 225, 232, 254, 399 |
| FatI | CATG | 7 cut(s) | 12, 94, 207, 221, 228, 250, 395 |
| FokI | GGATG | 2 cut(s) | 20, 251 |
| FspBI | CTAG | 1 cut(s) | 87 |
| HaeIII | GGCC | 3 cut(s) | 69, 227, 290 |
| HapII | CCGG | 2 cut(s) | 38, 70 |
| HgaI | GACGC | 1 cut(s) | 269 |
| Hin1II | CATG | 7 cut(s) | 16, 98, 211, 225, 232, 254, 399 |
| HincII | GTYRAC | 1 cut(s) | 92 |
| HindII | GTYRAC | 1 cut(s) | 92 |
| HpaII | CCGG | 2 cut(s) | 38, 70 |
| HphI | GGTGA | 4 cut(s) | 15, 56, 113, 146 |
| Hpy166II | GTNNAC | 1 cut(s) | 92 |
| Hpy188I | TCNGA | 1 cut(s) | 165 |
| Hpy8I | GTNNAC | 1 cut(s) | 92 |
| HpyAV | CCTTC | 1 cut(s) | 119 |
| HpyCH4III | ACNGT | 3 cut(s) | 27, 217, 298 |
| HpyCH4IV | ACGT | 1 cut(s) | 142 |
| HpyCH4V | TGCA | 2 cut(s) | 232, 395 |
| HpyF3I | CTNAG | 1 cut(s) | 164 |
| HpySE526I | ACGT | 1 cut(s) | 142 |
| Hsp92II | CATG | 7 cut(s) | 16, 98, 211, 225, 232, 254, 399 |
| LpnPI | CCDG | 3 cut(s) | 51, 83, 268 |
| LweI | GCATC | 1 cut(s) | 270 |
| MaeI | CTAG | 1 cut(s) | 87 |
| MaeII | ACGT | 1 cut(s) | 142 |
| MaeIII | GTNAC | 2 cut(s) | 152, 217 |
| MluCI | AATT | 3 cut(s) | 174, 311, 335 |
| MnlI | CCTC | 6 cut(s) | 9, 56, 161, 278, 327, 343 |
| MseI | TTAA | 2 cut(s) | 300, 338 |
| MslI | CAYNNNNRTG | 1 cut(s) | 99 |
| MspI | CCGG | 2 cut(s) | 38, 70 |
| MspR9I | CCNGG | 1 cut(s) | 39 |
| NciI | CCSGG | 1 cut(s) | 39 |
| NlaIII | CATG | 7 cut(s) | 16, 98, 211, 225, 232, 254, 399 |
| NlaIV | GGNNCC | 1 cut(s) | 291 |
| NmuCI | GTSAC | 2 cut(s) | 152, 217 |
| Ppu21I | YACGTR | 1 cut(s) | 143 |
| PspN4I | GGNNCC | 1 cut(s) | 291 |
| PspPI | GGNCC | 2 cut(s) | 225, 289 |
| RsaI | GTAC | 2 cut(s) | 20, 141 |
| RsaNI | GTAC | 2 cut(s) | 19, 140 |
| RseI | CAYNNNNRTG | 1 cut(s) | 99 |
| SaqAI | TTAA | 2 cut(s) | 300, 338 |
| Sau96I | GGNCC | 2 cut(s) | 225, 289 |
| ScrFI | CCNGG | 1 cut(s) | 39 |
| SetI | ASST | 5 cut(s) | 20, 67, 83, 109, 145 |
| SfaNI | GCATC | 1 cut(s) | 270 |
| SfcI | CTRYAG | 1 cut(s) | 294 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 99 |
| Sse9I | AATT | 3 cut(s) | 174, 311, 335 |
| SsiI | CCGC | 2 cut(s) | 99, 150 |
| SspMI | CTAG | 1 cut(s) | 87 |
| StyD4I | CCNGG | 1 cut(s) | 37 |
| TaaI | ACNGT | 3 cut(s) | 27, 217, 298 |
| TaiI | ACGT | 1 cut(s) | 145 |
| TaqI | TCGA | 1 cut(s) | 270 |
| TasI | AATT | 3 cut(s) | 174, 311, 335 |
| Tru1I | TTAA | 2 cut(s) | 300, 338 |
| Tru9I | TTAA | 2 cut(s) | 300, 338 |
| TscAI | CASTG | 2 cut(s) | 220, 379 |
| TseFI | GTSAC | 2 cut(s) | 152, 217 |
| Tsp45I | GTSAC | 2 cut(s) | 152, 217 |
| TspDTI | ATGAA | 1 cut(s) | 347 |
| TspRI | CASTG | 2 cut(s) | 220, 379 |
| XapI | RAATTY | 1 cut(s) | 311 |
| XspI | CTAG | 1 cut(s) | 87 |