Rroxscaffold_6G00388680

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000075
Physical Location & Seq
Forward (+)
1741081 .. 1742794
1714 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00388680.1

Sequence Viewer

Length: 1113 bp
ATGAGGTTCGGGGTGCTCGAGAGCCAACTCAAGATCCCCGGGAGCCGCCCATACGGTGGTGAGGCGGCGAGCGTCCCTAAGTACGTGTTGGCAAGCATCGGTTCCCGAGACTTAGGAAGTAGTGAGACGGTCCCCGGGTCTTGGCGGGGAGGGGTGGATCTCGGTGGTTTAACGGTCGAAGTGTTTGAGGTGCAACCCGAGTCCGGAGAGGTCGTGGCTTGGGTTGCCCGGAGTTACCGAGAAGGGGACTCGTGGCCGGGATGGCGAGGGGGTTGGGATCGGAGTGTCGGACACGTGCACCGGTACCGATGGGCTCGGGTCAAAGAAAAGGACCGCCTCACGGTGCGTCTCGGGAGTCCCCGAGTTGGTGTCGGTATCGATACTCGTGGTAGCAAAAGGTTTCGGGTTGATAATGTATCGCGCTCGAGATCTACCGGTGGGGGCTCGCGAGGTTCTCGCGATGAGGTTGTAGGGGGTCTCGCTCGCACCCCGGGCGAGATTGGAATTACCGATGGCCCCATTATACATATGGTCGCCGACACCGTGGAACTATCATCGCGACCGTATATTGACATTGGTGTGCGATGCGGTCGTGAACATGGATTATCATGCCTCGGCGAGTTAGTGGAACGCGAGGATATGAGGCGACCAATTGATGACGGGATCATGAGAAGGATGGAGATGGAGCGATCACTCATAGTAGAGGAGGCACGCCGCCAAGAGGCCGAGGGTGCCATTGCCCCGTTGAGGGAGGCCAACTTGGATCGACGGGAGGCCGCAACGGGTGGAGGATGGTCCGAAACTATGGATCGGTTGACCGCTTGCGAGACGTTGAGCTTGAAGCGGGCGAGAAGGAGGCGAGATGGAGTGGCTCGAAAGGAGTTAGCCAAGCAACAGGCTCGAGCTAGTGACTTTGCCGAGGAGTGCATTCGCGTGCGCGCCGCTGCCGAGACACATTGGGACAAGCTTCACAAGGCTTGCCCGGATGGTGCGGACAAGGCGGTGGATCTCTATCTCCGGTCGGCCACTTTCGGAGAAGATGAACAAAGCCTTCTCGGATGGGGCCCTACACTCTATCCGAGATGGTATCTCTGCCGCCGCTGGATTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

370

Amino Acids

41.19

Weight (kDa)

8.89

Isoelectric Point (pI)

54.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 303
AccB1I GGYRCC 2 cut(s) 303, 731
AccB7I CCANNNNNTGG 1 cut(s) 56
AccII CGCG 7 cut(s) 421, 448, 459, 559, 633, 933, 939
AccIII TCCGGA 1 cut(s) 203
AclWI GGATC 7 cut(s) 28, 165, 285, 671, 771, 816, 1014
AcoI YGGCCR 2 cut(s) 254, 1023
AcvI CACGTG 1 cut(s) 295
AfaI GTAC 2 cut(s) 83, 305
AfiI CCNNNNNNNGG 9 cut(s) 56, 141, 203, 244, 340, 365, 721, 747, 748
AflIII ACRYGT 2 cut(s) 84, 292
AgeI ACCGGT 2 cut(s) 300, 434
AgsI TTSAA 1 cut(s) 841
AluBI AGCT 3 cut(s) 837, 905, 967
AluI AGCT 3 cut(s) 837, 905, 967
Alw21I GWGCWC 2 cut(s) 18, 300
Alw26I GTCTC 6 cut(s) 102, 119, 353, 482, 821, 944
Alw44I GTGCAC 1 cut(s) 296
AlwI GGATC 7 cut(s) 28, 165, 285, 671, 771, 816, 1014
Aor13HI TCCGGA 1 cut(s) 203
AoxI GGCC 7 cut(s) 254, 514, 723, 753, 774, 1023, 1063
ApaI GGGCCC 1 cut(s) 1067
ApaLI GTGCAC 1 cut(s) 296
ApeKI GCWGC 1 cut(s) 944
AsiGI ACCGGT 2 cut(s) 300, 434
Asp718I GGTACC 1 cut(s) 303
AspLEI GCGC 3 cut(s) 423, 939, 941
AspS9I GGNCC 6 cut(s) 130, 331, 515, 795, 1063, 1064
AsuC2I CCSGG 9 cut(s) 39, 40, 135, 136, 229, 258, 491, 492, 983
AsuHPI GGTGA 1 cut(s) 71
AvaII GGWCC 3 cut(s) 130, 331, 795
BaeGI GKGCMC 2 cut(s) 300, 1067
BanI GGYRCC 2 cut(s) 303, 731
BanII GRGCYC 3 cut(s) 316, 446, 1067
BauI CACGAG 2 cut(s) 250, 384
BbrPI CACGTG 1 cut(s) 295
Bbv12I GWGCWC 2 cut(s) 18, 300
BbvI GCAGC 1 cut(s) 931
BcgI CGANNNNNNTGC 2 cut(s) 881, 915
BcnI CCSGG 9 cut(s) 39, 40, 135, 136, 229, 258, 491, 492, 983
BcoDI GTCTC 6 cut(s) 102, 119, 353, 482, 821, 944
BfaI CTAG 1 cut(s) 906
BglI GCCNNNNNGGC 1 cut(s) 262
BglII AGATCT 1 cut(s) 428
BisI GCNGC 8 cut(s) 46, 66, 715, 777, 942, 945, 1096, 1099
BlsI GCNGC 8 cut(s) 47, 67, 716, 778, 943, 946, 1097, 1100
Bme1390I CCNGG 9 cut(s) 39, 40, 135, 136, 229, 258, 491, 492, 983
Bme18I GGWCC 3 cut(s) 130, 331, 795
BmgT120I GGNCC 6 cut(s) 130, 331, 515, 795, 1063, 1064
BmiI GGNNCC 8 cut(s) 44, 103, 132, 305, 517, 733, 1064, 1065
BmrFI CCNGG 9 cut(s) 39, 40, 135, 136, 229, 258, 491, 492, 983
BmsI GCATC 2 cut(s) 105, 575
BpuEI CTTGAG 1 cut(s) 14
BpuMI CCSGG 9 cut(s) 39, 40, 135, 136, 229, 258, 491, 492, 983
Bsa29I ATCGAT 1 cut(s) 378
BsaAI YACGTR 2 cut(s) 85, 295
BsaBI GATNNNNATC 1 cut(s) 1011
BsaI GGTCTC 1 cut(s) 482
BsaWI WCCGGW 4 cut(s) 203, 300, 434, 1017
BsaXI ACNNNNNCTCC 2 cut(s) 198, 228
Bsc4I CCNNNNNNNGG 9 cut(s) 56, 141, 203, 244, 340, 365, 721, 747, 748
Bse118I RCCGGY 2 cut(s) 300, 434
Bse3DI GCAATG 1 cut(s) 735
Bse8I GATNNNNATC 1 cut(s) 1011
BseAI TCCGGA 1 cut(s) 203
BseCI ATCGAT 1 cut(s) 378
BseGI GGATG 5 cut(s) 266, 681, 797, 991, 1064
BseJI GATNNNNATC 1 cut(s) 1011
BseLI CCNNNNNNNGG 9 cut(s) 56, 141, 203, 244, 340, 365, 721, 747, 748
BseMI GCAATG 1 cut(s) 735
BsePI GCGCGC 1 cut(s) 937
BseRI GAGGAG 2 cut(s) 719, 935
BseSI GKGCMC 2 cut(s) 300, 1067
BseXI GCAGC 1 cut(s) 931
Bsh1236I CGCG 7 cut(s) 421, 448, 459, 559, 633, 933, 939
Bsh1285I CGRYCG 4 cut(s) 177, 563, 592, 1022
BshFI GGCC 7 cut(s) 256, 516, 725, 755, 776, 1025, 1065
BshNI GGYRCC 2 cut(s) 303, 731
BshTI ACCGGT 2 cut(s) 300, 434
BshVI ATCGAT 1 cut(s) 378
BsiEI CGRYCG 4 cut(s) 177, 563, 592, 1022
BsiHKAI GWGCWC 2 cut(s) 18, 300
BslFI GGGAC 5 cut(s) 59, 116, 260, 342, 974
BslI CCNNNNNNNGG 9 cut(s) 56, 141, 203, 244, 340, 365, 721, 747, 748
BsmAI GTCTC 6 cut(s) 102, 119, 353, 482, 821, 944
BsmBI CGTCTC 3 cut(s) 119, 353, 821
BsmFI GGGAC 5 cut(s) 59, 116, 260, 342, 974
BsmI GAATGC 1 cut(s) 927
BsnI GGCC 7 cut(s) 256, 516, 725, 755, 776, 1025, 1065
Bso31I GGTCTC 1 cut(s) 482
Bsp120I GGGCCC 1 cut(s) 1063
Bsp1286I GDGCHC 5 cut(s) 18, 300, 316, 446, 1067
Bsp13I TCCGGA 1 cut(s) 203
Bsp143I GATC 9 cut(s) 33, 157, 277, 428, 663, 689, 763, 808, 1006
Bsp68I TCGCGA 3 cut(s) 448, 459, 559
BspANI GGCC 7 cut(s) 256, 516, 725, 755, 776, 1025, 1065
BspDI ATCGAT 1 cut(s) 378
BspEI TCCGGA 1 cut(s) 203
BspFNI CGCG 7 cut(s) 421, 448, 459, 559, 633, 933, 939
BspHI TCATGA 1 cut(s) 666
BspLI GGNNCC 8 cut(s) 44, 103, 132, 305, 517, 733, 1064, 1065
BspPI GGATC 7 cut(s) 28, 165, 285, 671, 771, 816, 1014
BspT107I GGYRCC 2 cut(s) 303, 731
BspTNI GGTCTC 1 cut(s) 482
BsrDI GCAATG 1 cut(s) 735
BsrFI RCCGGY 2 cut(s) 300, 434
BssAI RCCGGY 2 cut(s) 300, 434
BssHII GCGCGC 1 cut(s) 937
BssMI GATC 9 cut(s) 33, 157, 277, 428, 663, 689, 763, 808, 1006
BssSI CACGAG 2 cut(s) 250, 384
Bst2BI CACGAG 2 cut(s) 250, 384
Bst4CI ACNGT 6 cut(s) 56, 130, 175, 343, 544, 564
BstBAI YACGTR 2 cut(s) 85, 295
BstDEI CTNAG 2 cut(s) 78, 112
BstDSI CCRYGG 1 cut(s) 543
BstF5I GGATG 5 cut(s) 266, 681, 797, 991, 1064
BstFNI CGCG 7 cut(s) 421, 448, 459, 559, 633, 933, 939
BstHHI GCGC 3 cut(s) 423, 939, 941
BstKTI GATC 9 cut(s) 36, 160, 280, 431, 666, 692, 766, 811, 1009
BstMAI GTCTC 6 cut(s) 102, 119, 353, 482, 821, 944
BstMBI GATC 9 cut(s) 33, 157, 277, 428, 663, 689, 763, 808, 1006
BstMCI CGRYCG 4 cut(s) 177, 563, 592, 1022
BstMWI GCNNNNNNNGC 5 cut(s) 224, 262, 492, 731, 998
BstSCI CCNGG 9 cut(s) 37, 38, 133, 134, 227, 256, 489, 490, 981
BstSLI GKGCMC 2 cut(s) 300, 1067
BstUI CGCG 7 cut(s) 421, 448, 459, 559, 633, 933, 939
BstV1I GCAGC 1 cut(s) 931
BstX2I RGATCY 4 cut(s) 33, 157, 428, 1006
BstYI RGATCY 4 cut(s) 33, 157, 428, 1006
Bsu15I ATCGAT 1 cut(s) 378
BsuRI GGCC 7 cut(s) 256, 516, 725, 755, 776, 1025, 1065
BsuTUI ATCGAT 1 cut(s) 378
BtgI CCRYGG 1 cut(s) 543
BtgZI GCGATG 3 cut(s) 474, 540, 598
BtsCI GGATG 5 cut(s) 266, 681, 797, 991, 1064
BtuMI TCGCGA 3 cut(s) 448, 459, 559
CciI TCATGA 1 cut(s) 666
CfoI GCGC 3 cut(s) 423, 939, 941
Cfr10I RCCGGY 2 cut(s) 300, 434
Cfr13I GGNCC 6 cut(s) 130, 331, 515, 795, 1063, 1064
Cfr9I CCCGGG 3 cut(s) 38, 134, 490
ClaI ATCGAT 1 cut(s) 378
CseI GACGC 2 cut(s) 61, 335
Csp6I GTAC 2 cut(s) 82, 304
CspAI ACCGGT 2 cut(s) 300, 434
CviAII CATG 3 cut(s) 599, 609, 667
CviQI GTAC 2 cut(s) 82, 304
DdeI CTNAG 2 cut(s) 78, 112
DpnI GATC 9 cut(s) 35, 159, 279, 430, 665, 691, 765, 810, 1008
DpnII GATC 9 cut(s) 33, 157, 277, 428, 663, 689, 763, 808, 1006
EaeI YGGCCR 2 cut(s) 254, 1023
Eco24I GRGCYC 3 cut(s) 316, 446, 1067
Eco31I GGTCTC 1 cut(s) 482
Eco47I GGWCC 3 cut(s) 130, 331, 795
Eco72I CACGTG 1 cut(s) 295
EcoO109I RGGNCCY 2 cut(s) 1063, 1064
EcoT38I GRGCYC 3 cut(s) 316, 446, 1067
Esp3I CGTCTC 3 cut(s) 119, 353, 821
FaeI CATG 3 cut(s) 602, 612, 670
FaqI GGGAC 5 cut(s) 59, 116, 260, 342, 974
FatI CATG 3 cut(s) 598, 608, 666
FauI CCCGC 2 cut(s) 138, 837
FauNDI CATATG 1 cut(s) 528
Fnu4HI GCNGC 8 cut(s) 46, 66, 715, 777, 942, 945, 1096, 1099
FokI GGATG 5 cut(s) 273, 688, 804, 998, 1071
FriOI GRGCYC 3 cut(s) 316, 446, 1067
Fsp4HI GCNGC 8 cut(s) 46, 66, 715, 777, 942, 945, 1096, 1099
FspBI CTAG 1 cut(s) 906
GlaI GCGC 3 cut(s) 422, 938, 940
GluI GCNGC 8 cut(s) 46, 66, 715, 777, 942, 945, 1096, 1099
HaeIII GGCC 7 cut(s) 256, 516, 725, 755, 776, 1025, 1065
HgaI GACGC 2 cut(s) 61, 335
HhaI GCGC 3 cut(s) 423, 939, 941
Hin1II CATG 3 cut(s) 602, 612, 670
Hin6I GCGC 3 cut(s) 421, 937, 939
HinP1I GCGC 3 cut(s) 421, 937, 939
HincII GTYRAC 1 cut(s) 816
HindII GTYRAC 1 cut(s) 816
HindIII AAGCTT 1 cut(s) 965
HinfI GANTC 3 cut(s) 200, 248, 355
HphI GGTGA 1 cut(s) 71
Hpy166II GTNNAC 3 cut(s) 298, 596, 816
Hpy188I TCNGA 6 cut(s) 282, 290, 799, 1034, 1058, 1080
Hpy8I GTNNAC 3 cut(s) 298, 596, 816
Hpy99I CGWCG 1 cut(s) 771
HpyAV CCTTC 4 cut(s) 236, 666, 846, 1061
HpyCH4III ACNGT 6 cut(s) 56, 130, 175, 343, 544, 564
HpyCH4IV ACGT 3 cut(s) 84, 294, 830
HpyCH4V TGCA 3 cut(s) 193, 298, 927
HpyF10VI GCNNNNNNNGC 5 cut(s) 224, 262, 492, 731, 998
HpyF3I CTNAG 2 cut(s) 78, 112
HpySE526I ACGT 3 cut(s) 84, 294, 830
Hsp92II CATG 3 cut(s) 602, 612, 670
HspAI GCGC 3 cut(s) 421, 937, 939
Kpn2I TCCGGA 1 cut(s) 203
KpnI GGTACC 1 cut(s) 307
Kzo9I GATC 9 cut(s) 33, 157, 277, 428, 663, 689, 763, 808, 1006
LmnI GCTCC 2 cut(s) 42, 685
Lsp1109I GCAGC 1 cut(s) 931
LweI GCATC 2 cut(s) 105, 575
MaeI CTAG 1 cut(s) 906
MaeII ACGT 3 cut(s) 84, 294, 830
MaeIII GTNAC 2 cut(s) 233, 908
MalI GATC 9 cut(s) 35, 159, 279, 430, 665, 691, 765, 810, 1008
MboI GATC 9 cut(s) 33, 157, 277, 428, 663, 689, 763, 808, 1006
MboII GAAGA 1 cut(s) 1049
MfeI CAATTG 1 cut(s) 651
MflI RGATCY 4 cut(s) 33, 157, 428, 1006
MhlI GDGCHC 5 cut(s) 18, 300, 316, 446, 1067
MluCI AATT 2 cut(s) 504, 651
MlyI GAGTC 3 cut(s) 209, 242, 364
MmeI TCCRAC 1 cut(s) 268
MroI TCCGGA 1 cut(s) 203
MseI TTAA 1 cut(s) 170
MslI CAYNNNNRTG 2 cut(s) 578, 932
MspA1I CMGCKG 2 cut(s) 944, 1101
MspR9I CCNGG 9 cut(s) 39, 40, 135, 136, 229, 258, 491, 492, 983
MunI CAATTG 1 cut(s) 651
Mva1269I GAATGC 1 cut(s) 927
MvnI CGCG 7 cut(s) 421, 448, 459, 559, 633, 933, 939
MwoI GCNNNNNNNGC 5 cut(s) 224, 262, 492, 731, 998
NciI CCSGG 9 cut(s) 39, 40, 135, 136, 229, 258, 491, 492, 983
NdeI CATATG 1 cut(s) 528
NdeII GATC 9 cut(s) 33, 157, 277, 428, 663, 689, 763, 808, 1006
NlaIII CATG 3 cut(s) 602, 612, 670
NlaIV GGNNCC 8 cut(s) 44, 103, 132, 305, 517, 733, 1064, 1065
NmeAIII GCCGAG 4 cut(s) 594, 751, 943, 973
NmuCI GTSAC 1 cut(s) 908
NruI TCGCGA 3 cut(s) 448, 459, 559
PaeR7I CTCGAG 3 cut(s) 17, 424, 900
PagI TCATGA 1 cut(s) 666
PauI GCGCGC 1 cut(s) 937
PcsI WCGNNNNNNNCGW 2 cut(s) 15, 540
PctI GAATGC 1 cut(s) 927
PflMI CCANNNNNTGG 1 cut(s) 56
PinAI ACCGGT 2 cut(s) 300, 434
PkrI GCNGC 8 cut(s) 47, 67, 716, 778, 943, 946, 1097, 1100
PleI GAGTC 3 cut(s) 208, 242, 363
PmaCI CACGTG 1 cut(s) 295
PmlI CACGTG 1 cut(s) 295
PpsI GAGTC 3 cut(s) 208, 242, 363
Ppu21I YACGTR 2 cut(s) 85, 295
PspCI CACGTG 1 cut(s) 295
PspN4I GGNNCC 8 cut(s) 44, 103, 132, 305, 517, 733, 1064, 1065
PspOMI GGGCCC 1 cut(s) 1063
PspPI GGNCC 6 cut(s) 130, 331, 515, 795, 1063, 1064
PspXI VCTCGAGB 1 cut(s) 900
PsuI RGATCY 4 cut(s) 33, 157, 428, 1006
PteI GCGCGC 1 cut(s) 937
RruI TCGCGA 3 cut(s) 448, 459, 559
RsaI GTAC 2 cut(s) 83, 305
RsaNI GTAC 2 cut(s) 82, 304
RseI CAYNNNNRTG 2 cut(s) 578, 932
SaqAI TTAA 1 cut(s) 170
SatI GCNGC 8 cut(s) 46, 66, 715, 777, 942, 945, 1096, 1099
Sau3AI GATC 9 cut(s) 33, 157, 277, 428, 663, 689, 763, 808, 1006
Sau96I GGNCC 6 cut(s) 130, 331, 515, 795, 1063, 1064
SchI GAGTC 3 cut(s) 209, 242, 364
ScrFI CCNGG 9 cut(s) 39, 40, 135, 136, 229, 258, 491, 492, 983
SduI GDGCHC 5 cut(s) 18, 300, 316, 446, 1067
SfaNI GCATC 2 cut(s) 105, 575
Sfr274I CTCGAG 3 cut(s) 17, 424, 900
SinI GGWCC 3 cut(s) 130, 331, 795
SlaI CTCGAG 3 cut(s) 17, 424, 900
SmaI CCCGGG 3 cut(s) 40, 136, 492
SmiMI CAYNNNNRTG 2 cut(s) 578, 932
SmlI CTYRAG 4 cut(s) 17, 29, 424, 900
SmoI CTYRAG 4 cut(s) 17, 29, 424, 900
Sse9I AATT 2 cut(s) 504, 651
SspMI CTAG 1 cut(s) 906
StyD4I CCNGG 9 cut(s) 37, 38, 133, 134, 227, 256, 489, 490, 981
TaaI ACNGT 6 cut(s) 56, 130, 175, 343, 544, 564
TaiI ACGT 3 cut(s) 87, 297, 833
TaqI TCGA 7 cut(s) 18, 177, 378, 425, 766, 874, 901
TasI AATT 2 cut(s) 504, 651
TauI GCSGC 7 cut(s) 48, 68, 717, 779, 944, 1098, 1101
Tru1I TTAA 1 cut(s) 170
Tru9I TTAA 1 cut(s) 170
TseFI GTSAC 1 cut(s) 908
TseI GCWGC 1 cut(s) 944
Tsp45I GTSAC 1 cut(s) 908
TspDTI ATGAA 1 cut(s) 1056
TspMI CCCGGG 3 cut(s) 38, 134, 490
Van91I CCANNNNNTGG 1 cut(s) 56
VneI GTGCAC 1 cut(s) 296
VpaK11BI GGWCC 3 cut(s) 130, 331, 795
XcmI CCANNNNNNNNNTGG 1 cut(s) 526
XhoI CTCGAG 3 cut(s) 17, 424, 900
XmaI CCCGGG 3 cut(s) 38, 134, 490
XspI CTAG 1 cut(s) 906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.