Rmu_sc0001423.1_g000046

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001423.1
OG0000075
Physical Location & Seq
Forward (+)
216243 .. 218998
2756 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001423.1_g000046.1.cds

Sequence Viewer

Length: 1209 bp
atgaattaccatgcctctggcgagttggtagcgcattttgatcgggagatagcccggttgcagggggagctggatgccaagagggagcgagcgcgcgagcttcagggtgcagtggaccaaggccagatggagctcgaggatatgaggcgagtaattgatgaagggatcgcgaggaggatggagctggaacgatcacgtacttgccatagaggaggctcgttgtcaagaggtcgagggtgctatcactccattgagggaggcgaacctggatcttactgggaagctgcaacgagcggaggatggcctgagttggagcttcgtgttgctgccttggagagtttggctccttatcccgatcgcgtggtggatttggaggggcaggttggtaatctgcaaagggaggatgaccgtttacgggatgttgagcttgaagcaagcgagagggaggcagagatggagtggctcaagaacgagttagccaagcaacaggctcggtcgagtggctttgtaaaagagtgcattcgtctgcgcgctgctgccgagacacatcgggacaagcttgctaaggctaggtgggatggtgcggacaaggcggtggatctctttcttcggtcagcccactttcaagagaagatgaacaaagccttctcggatggggccaagaaggcagcgagatcgcaagccagtgctgcaagtggtggtcgaggtgctgggatcgtgatccgggagcaggctgtatcagagcaagtatcgggacaagccggcgatcgcgaggcggagggtgccactggggagcgggaggcccgcgtggatatcgagggtgaggtgcgaggagagaatgttggagagcgagatggggtggaagagatgatatcgatatttgtggcgatagcgagtggcaaaattattgacattgagcgatattatttggcgtggcggctcgtcggcgtgagccgtcgctgcctcgtacgtaaggggcccatgaatctcgatgtgtcgcgtggtgaactatgttcatggatgagtaacctgaacaaattggactttgctccattgggaacaactggctctggatatcacatatgggttcgtgatgtccgccagcatctcaaggccgatggaatccgggatacaattctcgagcctagccaggacgtgttaactattaagcaagctcaagctttggaagcaactagagcagccttatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

402

Amino Acids

44.64

Weight (kDa)

5.62

Isoelectric Point (pI)

39.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 370
AccB1I GGYRCC 1 cut(s) 782
AccBSI CCGCTC 2 cut(s) 294, 796
AccII CGCG 8 cut(s) 94, 96, 170, 360, 531, 771, 807, 1000
AciI CCGC 8 cut(s) 294, 584, 593, 776, 796, 805, 937, 1099
AclWI GGATC 5 cut(s) 173, 277, 606, 715, 722
AcuI CTGAAG 1 cut(s) 86
AfaI GTAC 2 cut(s) 199, 969
AfiI CCNNNNNNNGG 3 cut(s) 61, 415, 730
AflIII ACRYGT 1 cut(s) 1155
AgsI TTSAA 2 cut(s) 431, 626
AjiI CACGTC 1 cut(s) 1156
AjnI CCWGG 2 cut(s) 265, 1149
Alw21I GWGCWC 1 cut(s) 135
Alw26I GTCTC 1 cut(s) 536
AlwI GGATC 5 cut(s) 173, 277, 606, 715, 722
Ama87I CYCGRG 2 cut(s) 134, 1139
AoxI GGCC 6 cut(s) 121, 302, 657, 801, 977, 1113
ApaI GGGCCC 1 cut(s) 981
ApeKI GCWGC 8 cut(s) 284, 326, 533, 536, 668, 689, 960, 1199
AsiSI GCGATCGC 1 cut(s) 769
AspLEI GCGC 5 cut(s) 34, 94, 96, 531, 533
AspS9I GGNCC 5 cut(s) 115, 657, 802, 977, 978
AsuC2I CCSGG 3 cut(s) 55, 725, 1127
AsuHPI GGTGA 2 cut(s) 833, 1016
AvaI CYCGRG 2 cut(s) 134, 1139
AvaII GGWCC 1 cut(s) 115
BaeGI GKGCMC 1 cut(s) 981
BanI GGYRCC 1 cut(s) 782
BanII GRGCYC 2 cut(s) 135, 981
Bbv12I GWGCWC 1 cut(s) 135
BbvI GCAGC 7 cut(s) 271, 313, 520, 523, 676, 680, 947
BccI CCATC 8 cut(s) 121, 172, 294, 448, 572, 647, 848, 1112
BceAI ACGGC 1 cut(s) 939
BcgI CGANNNNNNTGC 6 cut(s) 23, 57, 473, 507, 657, 691
BciT130I CCWGG 2 cut(s) 267, 1151
BciVI GTATCC 1 cut(s) 1123
BcnI CCSGG 3 cut(s) 55, 725, 1127
BcoDI GTCTC 1 cut(s) 536
BfaI CTAG 3 cut(s) 570, 1146, 1194
BfuAI ACCTGC 1 cut(s) 370
BfuI GTATCC 1 cut(s) 1123
BglI GCCNNNNNGGC 1 cut(s) 665
BisI GCNGC 9 cut(s) 285, 327, 534, 537, 669, 690, 938, 961, 1200
BlsI GCNGC 9 cut(s) 286, 328, 535, 538, 670, 691, 939, 962, 1201
Bme1390I CCNGG 5 cut(s) 55, 267, 725, 1127, 1151
Bme18I GGWCC 1 cut(s) 115
BmeT110I CYCGRG 2 cut(s) 134, 1139
BmgBI CACGTC 1 cut(s) 1156
BmgT120I GGNCC 5 cut(s) 115, 657, 802, 977, 978
BmiI GGNNCC 5 cut(s) 345, 658, 784, 978, 979
BmrFI CCNGG 5 cut(s) 55, 267, 725, 1127, 1151
BmrI ACTGGG 2 cut(s) 286, 798
BmsI GCATC 2 cut(s) 64, 1114
BmuI ACTGGG 2 cut(s) 286, 798
BplI GAGNNNNNCTC 2 cut(s) 328, 360
Bpu10I CCTNAGC 1 cut(s) 564
BpuEI CTTGAG 3 cut(s) 449, 1094, 1161
BpuMI CCSGG 3 cut(s) 55, 725, 1127
Bsa29I ATCGAT 1 cut(s) 875
BsaAI YACGTR 2 cut(s) 197, 971
BsaBI GATNNNNATC 1 cut(s) 719
BsaJI CCNNGG 2 cut(s) 118, 330
BsaXI ACNNNNNCTCC 2 cut(s) 825, 855
Bsc4I CCNNNNNNNGG 3 cut(s) 61, 415, 730
Bse118I RCCGGY 1 cut(s) 761
Bse1I ACTGG 4 cut(s) 281, 684, 793, 1069
Bse8I GATNNNNATC 1 cut(s) 719
BseBI CCWGG 2 cut(s) 267, 1151
BseCI ATCGAT 1 cut(s) 875
BseDI CCNNGG 2 cut(s) 118, 330
BseGI GGATG 8 cut(s) 79, 183, 305, 409, 424, 583, 658, 1026
BseJI GATNNNNATC 1 cut(s) 719
BseLI CCNNNNNNNGG 3 cut(s) 61, 415, 730
BseMII CTCAG 1 cut(s) 297
BseNI ACTGG 4 cut(s) 281, 684, 793, 1069
BsePI GCGCGC 2 cut(s) 92, 529
BseRI GAGGAG 3 cut(s) 187, 225, 846
BseSI GKGCMC 1 cut(s) 981
BseXI GCAGC 7 cut(s) 271, 313, 520, 523, 676, 680, 947
BseYI CCCAGC 1 cut(s) 710
BsgI GTGCAG 1 cut(s) 129
Bsh1236I CGCG 8 cut(s) 94, 96, 170, 360, 531, 771, 807, 1000
Bsh1285I CGRYCG 3 cut(s) 358, 497, 769
BshFI GGCC 6 cut(s) 123, 304, 659, 803, 979, 1115
BshNI GGYRCC 1 cut(s) 782
BshVI ATCGAT 1 cut(s) 875
BsiEI CGRYCG 3 cut(s) 358, 497, 769
BsiHKAI GWGCWC 1 cut(s) 135
BsiHKCI CYCGRG 2 cut(s) 134, 1139
BsiSI CCGG 4 cut(s) 55, 724, 762, 1126
BsiWI CGTACG 1 cut(s) 967
BslFI GGGAC 2 cut(s) 566, 768
BslI CCNNNNNNNGG 3 cut(s) 61, 415, 730
BsmAI GTCTC 1 cut(s) 536
BsmFI GGGAC 2 cut(s) 566, 768
BsmI GAATGC 1 cut(s) 519
BsnI GGCC 6 cut(s) 123, 304, 659, 803, 979, 1115
BsoBI CYCGRG 2 cut(s) 134, 1139
Bsp120I GGGCCC 1 cut(s) 977
Bsp1286I GDGCHC 2 cut(s) 135, 981
Bsp68I TCGCGA 2 cut(s) 170, 771
BspACI CCGC 8 cut(s) 294, 584, 593, 776, 796, 805, 937, 1099
BspANI GGCC 6 cut(s) 123, 304, 659, 803, 979, 1115
BspCNI CTCAG 1 cut(s) 298
BspDI ATCGAT 1 cut(s) 875
BspFNI CGCG 8 cut(s) 94, 96, 170, 360, 531, 771, 807, 1000
BspLI GGNNCC 5 cut(s) 345, 658, 784, 978, 979
BspMI ACCTGC 1 cut(s) 370
BspPI GGATC 5 cut(s) 173, 277, 606, 715, 722
BspT107I GGYRCC 1 cut(s) 782
BsrBI CCGCTC 2 cut(s) 294, 796
BsrFI RCCGGY 1 cut(s) 761
BsrI ACTGG 4 cut(s) 281, 684, 793, 1069
BssAI RCCGGY 1 cut(s) 761
BssECI CCNNGG 2 cut(s) 118, 330
BssHII GCGCGC 2 cut(s) 92, 529
BssT1I CCWWGG 2 cut(s) 118, 330
Bst2UI CCWGG 2 cut(s) 267, 1151
Bst4CI ACNGT 1 cut(s) 410
Bst6I CTCTTC 1 cut(s) 858
BstBAI YACGTR 2 cut(s) 197, 971
BstDEI CTNAG 2 cut(s) 306, 564
BstF5I GGATG 8 cut(s) 79, 183, 305, 409, 424, 583, 658, 1026
BstFNI CGCG 8 cut(s) 94, 96, 170, 360, 531, 771, 807, 1000
BstHHI GCGC 5 cut(s) 34, 94, 96, 531, 533
BstMAI GTCTC 1 cut(s) 536
BstMCI CGRYCG 3 cut(s) 358, 497, 769
BstMWI GCNNNNNNNGC 8 cut(s) 67, 590, 665, 689, 782, 960, 1187, 1196
BstNI CCWGG 2 cut(s) 267, 1151
BstSCI CCNGG 5 cut(s) 53, 265, 723, 1125, 1149
BstSLI GKGCMC 1 cut(s) 981
BstSNI TACGTA 1 cut(s) 971
BstUI CGCG 8 cut(s) 94, 96, 170, 360, 531, 771, 807, 1000
BstV1I GCAGC 7 cut(s) 271, 313, 520, 523, 676, 680, 947
BstX2I RGATCY 2 cut(s) 269, 598
BstXI CCANNNNNNTGG 1 cut(s) 17
BstYI RGATCY 2 cut(s) 269, 598
Bsu15I ATCGAT 1 cut(s) 875
BsuI GTATCC 1 cut(s) 1123
BsuRI GGCC 6 cut(s) 123, 304, 659, 803, 979, 1115
BsuTUI ATCGAT 1 cut(s) 875
BtrI CACGTC 1 cut(s) 1156
BtsCI GGATG 8 cut(s) 79, 183, 305, 409, 424, 583, 658, 1026
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 3 cut(s) 117, 691, 786
BtuMI TCGCGA 2 cut(s) 170, 771
BveI ACCTGC 1 cut(s) 370
CfoI GCGC 5 cut(s) 34, 94, 96, 531, 533
Cfr10I RCCGGY 1 cut(s) 761
Cfr13I GGNCC 5 cut(s) 115, 657, 802, 977, 978
ClaI ATCGAT 1 cut(s) 875
Csp6I GTAC 2 cut(s) 198, 968
CviAII CATG 3 cut(s) 11, 982, 1017
CviQI GTAC 2 cut(s) 198, 968
DdeI CTNAG 2 cut(s) 306, 564
Eam1104I CTCTTC 1 cut(s) 858
EarI CTCTTC 1 cut(s) 858
EciI GGCGGA 2 cut(s) 791, 1088
Ecl136II GAGCTC 1 cut(s) 133
Eco105I TACGTA 1 cut(s) 971
Eco130I CCWWGG 2 cut(s) 118, 330
Eco24I GRGCYC 2 cut(s) 135, 981
Eco32I GATATC 3 cut(s) 814, 873, 1076
Eco47I GGWCC 1 cut(s) 115
Eco53kI GAGCTC 1 cut(s) 133
Eco57I CTGAAG 1 cut(s) 86
Eco88I CYCGRG 2 cut(s) 134, 1139
EcoICRI GAGCTC 1 cut(s) 133
EcoO109I RGGNCCY 1 cut(s) 977
EcoRII CCWGG 2 cut(s) 265, 1149
EcoRV GATATC 3 cut(s) 814, 873, 1076
EcoT14I CCWWGG 2 cut(s) 118, 330
EcoT38I GRGCYC 2 cut(s) 135, 981
ErhI CCWWGG 2 cut(s) 118, 330
FaeI CATG 3 cut(s) 14, 985, 1020
FaiI YATR 9 cut(s) 12, 143, 207, 983, 1012, 1018, 1082, 1084, 1207
FaqI GGGAC 2 cut(s) 566, 768
FatI CATG 3 cut(s) 10, 981, 1016
FauI CCCGC 2 cut(s) 789, 812
FauNDI CATATG 1 cut(s) 1082
Fnu4HI GCNGC 9 cut(s) 285, 327, 534, 537, 669, 690, 938, 961, 1200
FokI GGATG 8 cut(s) 86, 190, 312, 416, 431, 590, 665, 1033
FriOI GRGCYC 2 cut(s) 135, 981
Fsp4HI GCNGC 9 cut(s) 285, 327, 534, 537, 669, 690, 938, 961, 1200
FspBI CTAG 3 cut(s) 570, 1146, 1194
GlaI GCGC 5 cut(s) 33, 93, 95, 530, 532
GluI GCNGC 9 cut(s) 285, 327, 534, 537, 669, 690, 938, 961, 1200
GsaI CCCAGC 1 cut(s) 714
HaeIII GGCC 6 cut(s) 123, 304, 659, 803, 979, 1115
HapII CCGG 4 cut(s) 55, 724, 762, 1126
HhaI GCGC 5 cut(s) 34, 94, 96, 531, 533
Hin1II CATG 3 cut(s) 14, 985, 1020
Hin6I GCGC 5 cut(s) 32, 92, 94, 529, 531
HinP1I GCGC 5 cut(s) 32, 92, 94, 529, 531
HincII GTYRAC 1 cut(s) 1161
HindII GTYRAC 1 cut(s) 1161
HindIII AAGCTT 2 cut(s) 557, 1179
HinfI GANTC 2 cut(s) 985, 1122
HpaI GTTAAC 1 cut(s) 1161
HpaII CCGG 4 cut(s) 55, 724, 762, 1126
HphI GGTGA 2 cut(s) 833, 1016
Hpy166II GTNNAC 4 cut(s) 115, 413, 1007, 1161
Hpy188I TCNGA 2 cut(s) 652, 742
Hpy8I GTNNAC 4 cut(s) 115, 413, 1007, 1161
Hpy99I CGWCG 2 cut(s) 947, 960
HpyAV CCTTC 3 cut(s) 155, 655, 658
HpyCH4III ACNGT 1 cut(s) 410
HpyCH4IV ACGT 3 cut(s) 196, 970, 1155
HpyCH4V TGCA 6 cut(s) 61, 110, 287, 394, 519, 692
HpyF10VI GCNNNNNNNGC 8 cut(s) 67, 590, 665, 689, 782, 960, 1187, 1196
HpyF3I CTNAG 2 cut(s) 306, 564
HpySE526I ACGT 3 cut(s) 196, 970, 1155
Hsp92II CATG 3 cut(s) 14, 985, 1020
HspAI GCGC 5 cut(s) 32, 92, 94, 529, 531
KroI GCCGGC 1 cut(s) 761
KroNI GCCGGC 1 cut(s) 763
KspAI GTTAAC 1 cut(s) 1161
LmnI GCTCC 9 cut(s) 67, 85, 130, 181, 313, 349, 727, 793, 1054
Lsp1109I GCAGC 7 cut(s) 271, 313, 520, 523, 676, 680, 947
LweI GCATC 2 cut(s) 64, 1114
MaeI CTAG 3 cut(s) 570, 1146, 1194
MaeII ACGT 3 cut(s) 196, 970, 1155
MaeIII GTNAC 1 cut(s) 1025
MbiI CCGCTC 2 cut(s) 294, 796
MboII GAAGA 3 cut(s) 599, 643, 875
MflI RGATCY 2 cut(s) 269, 598
MhlI GDGCHC 2 cut(s) 135, 981
MluCI AATT 5 cut(s) 4, 153, 903, 1037, 1134
MmeI TCCRAC 2 cut(s) 291, 823
MroNI GCCGGC 1 cut(s) 761
MseI TTAA 2 cut(s) 1160, 1167
MspI CCGG 4 cut(s) 55, 724, 762, 1126
MspR9I CCNGG 5 cut(s) 55, 267, 725, 1127, 1151
Mva1269I GAATGC 1 cut(s) 519
MvaI CCWGG 2 cut(s) 267, 1151
MvnI CGCG 8 cut(s) 94, 96, 170, 360, 531, 771, 807, 1000
MwoI GCNNNNNNNGC 8 cut(s) 67, 590, 665, 689, 782, 960, 1187, 1196
NaeI GCCGGC 1 cut(s) 763
NciI CCSGG 3 cut(s) 55, 725, 1127
NdeI CATATG 1 cut(s) 1082
NgoMIV GCCGGC 1 cut(s) 761
NlaIII CATG 3 cut(s) 14, 985, 1020
NlaIV GGNNCC 5 cut(s) 345, 658, 784, 978, 979
NmeAIII GCCGAG 1 cut(s) 565
NruI TCGCGA 2 cut(s) 170, 771
PaeR7I CTCGAG 2 cut(s) 134, 1139
PauI GCGCGC 2 cut(s) 92, 529
PctI GAATGC 1 cut(s) 519
PdiI GCCGGC 1 cut(s) 763
PfeI GAWTC 2 cut(s) 985, 1122
Pfl23II CGTACG 1 cut(s) 967
PfoI TCCNGGA 2 cut(s) 723, 1125
PkrI GCNGC 9 cut(s) 286, 328, 535, 538, 670, 691, 939, 962, 1201
Ple19I CGATCG 2 cut(s) 358, 769
Ppu21I YACGTR 2 cut(s) 197, 971
Psp124BI GAGCTC 1 cut(s) 135
Psp6I CCWGG 2 cut(s) 265, 1149
PspFI CCCAGC 1 cut(s) 710
PspGI CCWGG 2 cut(s) 265, 1149
PspLI CGTACG 1 cut(s) 967
PspN4I GGNNCC 5 cut(s) 345, 658, 784, 978, 979
PspOMI GGGCCC 1 cut(s) 977
PspPI GGNCC 5 cut(s) 115, 657, 802, 977, 978
PspXI VCTCGAGB 1 cut(s) 134
PsuI RGATCY 2 cut(s) 269, 598
PteI GCGCGC 2 cut(s) 92, 529
PvuI CGATCG 2 cut(s) 358, 769
RgaI GCGATCGC 1 cut(s) 769
RruI TCGCGA 2 cut(s) 170, 771
RsaI GTAC 2 cut(s) 199, 969
RsaNI GTAC 2 cut(s) 198, 968
SacI GAGCTC 1 cut(s) 135
SaqAI TTAA 2 cut(s) 1160, 1167
SatI GCNGC 9 cut(s) 285, 327, 534, 537, 669, 690, 938, 961, 1200
Sau96I GGNCC 5 cut(s) 115, 657, 802, 977, 978
ScrFI CCNGG 5 cut(s) 55, 267, 725, 1127, 1151
SduI GDGCHC 2 cut(s) 135, 981
SfaAI GCGATCGC 1 cut(s) 769
SfaNI GCATC 2 cut(s) 64, 1114
Sfr274I CTCGAG 2 cut(s) 134, 1139
SgfI GCGATCGC 1 cut(s) 769
SinI GGWCC 1 cut(s) 115
SlaI CTCGAG 2 cut(s) 134, 1139
SmlI CTYRAG 5 cut(s) 134, 464, 1109, 1139, 1176
SmoI CTYRAG 5 cut(s) 134, 464, 1109, 1139, 1176
SnaBI TACGTA 1 cut(s) 971
Sse9I AATT 5 cut(s) 4, 153, 903, 1037, 1134
SsiI CCGC 8 cut(s) 294, 584, 593, 776, 796, 805, 937, 1099
SspMI CTAG 3 cut(s) 570, 1146, 1194
SstI GAGCTC 1 cut(s) 135
StyD4I CCNGG 5 cut(s) 53, 265, 723, 1125, 1149
StyI CCWWGG 2 cut(s) 118, 330
TaaI ACNGT 1 cut(s) 410
TaiI ACGT 3 cut(s) 199, 973, 1158
TaqI TCGA 8 cut(s) 135, 232, 497, 703, 816, 875, 990, 1140
TaqII GACCGA 2 cut(s) 483, 600
TasI AATT 5 cut(s) 4, 153, 903, 1037, 1134
TauI GCSGC 1 cut(s) 940
TfiI GAWTC 2 cut(s) 985, 1122
Tru1I TTAA 2 cut(s) 1160, 1167
Tru9I TTAA 2 cut(s) 1160, 1167
TscAI CASTG 3 cut(s) 117, 691, 793
TseI GCWGC 8 cut(s) 284, 326, 533, 536, 668, 689, 960, 1199
TspDTI ATGAA 5 cut(s) 17, 174, 650, 998, 1005
TspRI CASTG 3 cut(s) 117, 691, 793
VpaK11BI GGWCC 1 cut(s) 115
XhoI CTCGAG 2 cut(s) 134, 1139
XspI CTAG 3 cut(s) 570, 1146, 1194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.