Rmu_sc0013951.1_g000011

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013951.1
OG0000075
Physical Location & Seq
Reverse (-)
35158 .. 36755
1598 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013951.1_g000011.1.cds

Sequence Viewer

Length: 1266 bp
atgtcgctgcctgatgagatgtatcagaggtttctcgatgtcgtgttggagtatctgaatcagcgggccgaggaagaagccggtgccgaggggcatgaggtttggggtacacaagagccgattcaagatctacaggagcagcccatgcaggctggtgaggcgagtgagggtccccaagtgcttgttggcgagcatcagtcccctgagactcgagaagtgatgaggcagtccccccagatctcggtaggaggggaggatcttggtggcgtggctctggcctcggagcccaagggggagatggagatctccgtcgaggagttgctggaggaggcgcctgagatgcaaccccggttcagagagggtattgcttgggtttcccaggttaccgagaaggggacccatggccaagatggcgagggggatggagtccgagtttggtgtctcatcgatacccgcggtagcaagaggtctggagttgacaatgtatcgcgctcaagatctgcgagtgggggctcgcgaggttctcgcaatgaggttgtcgggggtctcgcgtgcaccctgtgcgagattggaattactgatgctgccatcctccatatggtcactgacctgcggaactgtcattgcgatcgcagtcacgtgagtgccgaagacctgctcctggggtatccggaagctcaagagaggttgatgagggctgtgaaaatgaattaccatgcctctggcgagttagtagcgcattttgatcgggagataacttggctgcagggggagctgaatgtcgagagagagcgggcacgtgagcttcagagtgtgttagaccaaggtcaggtggaacgcgaggatatgaggcaagcgatcgatgacgggatcgcgaggaggatggagttggaacgagcacttgccatagaggaggctcgtcgtcaagaggccgagggtgctatcgctccactgagggaggtgaacttggatcttactgggaagctgcaacgggtggaggatggcctgaggttggtagatcaagttagggcacgggttagtaaggctgaagagcttctacaagacttggaaaggcaggtccgagaacgagatgtcgagttggagcttcgtgcggctgcctgggagagtttgactccttatcccgatctcgtggtggatttggaggggcaggttggtaatctgcaaagggaggttgacagtttaagggatgttgagcttgaagcaggcgagaaggaggcagagatggagggtttagaaaggagttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

421

Amino Acids

47.05

Weight (kDa)

4.55

Isoelectric Point (pI)

51.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 4 cut(s) 618, 663, 1066, 1159
AccB1I GGYRCC 2 cut(s) 83, 331
AccBSI CCGCTC 1 cut(s) 793
AccII CGCG 6 cut(s) 456, 490, 517, 551, 840, 875
AccIII TCCGGA 1 cut(s) 670
AciI CCGC 6 cut(s) 64, 454, 456, 613, 793, 1112
AclWI GGATC 3 cut(s) 264, 878, 978
AcoI YGGCCR 1 cut(s) 403
AcuI CTGAAG 2 cut(s) 791, 1068
AcvI CACGTG 2 cut(s) 640, 800
AcyI GRCGYC 1 cut(s) 332
AdeI CACNNNGTG 1 cut(s) 561
AfaI GTAC 1 cut(s) 109
AfiI CCNNNNNNNGG 6 cut(s) 241, 393, 598, 661, 829, 1012
AgsI TTSAA 2 cut(s) 125, 1220
AjnI CCWGG 3 cut(s) 378, 660, 1118
AleI CACNNNNGTG 1 cut(s) 642
AluBI AGCT 7 cut(s) 677, 775, 805, 985, 1054, 1105, 1216
AluI AGCT 7 cut(s) 677, 775, 805, 985, 1054, 1105, 1216
Alw21I GWGCWC 2 cut(s) 557, 901
Alw26I GTCTC 3 cut(s) 200, 446, 551
Alw44I GTGCAC 1 cut(s) 553
AlwI GGATC 3 cut(s) 264, 878, 978
Ama87I CYCGRG 1 cut(s) 210
Aor13HI TCCGGA 1 cut(s) 670
AoxI GGCC 5 cut(s) 66, 276, 403, 930, 1003
ApaLI GTGCAC 1 cut(s) 553
ApeKI GCWGC 6 cut(s) 7, 139, 584, 763, 985, 1115
AsiSI GCGATCGC 1 cut(s) 631
Asp700I GAANNNNTTC 1 cut(s) 1053
AspLEI GCGC 3 cut(s) 334, 492, 739
AspS9I GGNCC 4 cut(s) 66, 170, 396, 1078
AsuC2I CCSGG 1 cut(s) 349
AsuHPI GGTGA 2 cut(s) 167, 973
AvaI CYCGRG 1 cut(s) 210
AvaII GGWCC 3 cut(s) 170, 396, 1078
AxyI CCTNAGG 1 cut(s) 1007
BaeGI GKGCMC 3 cut(s) 557, 799, 1033
BalI TGGCCA 1 cut(s) 405
BanI GGYRCC 2 cut(s) 83, 331
BanII GRGCYC 2 cut(s) 288, 515
BarI GAAGNNNNNNTAC 2 cut(s) 1041, 1073
BauI CACGAG 1 cut(s) 1148
BbrPI CACGTG 2 cut(s) 640, 800
BbsI GAAGAC 1 cut(s) 657
Bbv12I GWGCWC 2 cut(s) 557, 901
BbvI GCAGC 5 cut(s) 151, 571, 750, 972, 1102
BccI CCATC 7 cut(s) 292, 404, 416, 596, 877, 995, 1237
BcgI CGANNNNNNTGC 2 cut(s) 728, 762
BciT130I CCWGG 3 cut(s) 380, 662, 1120
BciVI GTATCC 1 cut(s) 678
BcnI CCSGG 1 cut(s) 349
BcoDI GTCTC 3 cut(s) 200, 446, 551
BfmI CTRYAG 2 cut(s) 131, 764
BfoI RGCGCY 1 cut(s) 335
BfuAI ACCTGC 4 cut(s) 618, 663, 1066, 1159
BfuI GTATCC 1 cut(s) 678
BglI GCCNNNNNGGC 1 cut(s) 411
BglII AGATCT 4 cut(s) 127, 237, 303, 497
BisI GCNGC 7 cut(s) 8, 140, 585, 764, 986, 1113, 1116
BlsI GCNGC 7 cut(s) 9, 141, 586, 765, 987, 1114, 1117
Bme1390I CCNGG 4 cut(s) 349, 380, 662, 1120
Bme18I GGWCC 3 cut(s) 170, 396, 1078
BmeT110I CYCGRG 1 cut(s) 210
BmgT120I GGNCC 4 cut(s) 66, 170, 396, 1078
BmiI GGNNCC 7 cut(s) 85, 171, 172, 285, 333, 397, 398
BmrFI CCNGG 4 cut(s) 349, 380, 662, 1120
BmrI ACTGGG 1 cut(s) 987
BmsI GCATC 3 cut(s) 202, 330, 571
BmuI ACTGGG 1 cut(s) 987
BoxI GACNNNNGTC 1 cut(s) 825
BpiI GAAGAC 1 cut(s) 657
BplI GAGNNNNNCTC 2 cut(s) 1117, 1149
BpmI CTGGAG 2 cut(s) 344, 492
BpuEI CTTGAG 2 cut(s) 478, 663
BpuMI CCSGG 1 cut(s) 349
Bsa29I ATCGAT 2 cut(s) 447, 861
BsaAI YACGTR 2 cut(s) 640, 800
BsaBI GATNNNNATC 1 cut(s) 302
BsaHI GRCGYC 1 cut(s) 332
BsaI GGTCTC 1 cut(s) 551
BsaWI WCCGGW 1 cut(s) 670
BsaXI ACNNNNNCTCC 2 cut(s) 417, 447
Bsc4I CCNNNNNNNGG 6 cut(s) 241, 393, 598, 661, 829, 1012
Bse118I RCCGGY 1 cut(s) 80
Bse1I ACTGG 1 cut(s) 982
Bse21I CCTNAGG 1 cut(s) 1007
Bse3DI GCAATG 2 cut(s) 535, 622
Bse8I GATNNNNATC 1 cut(s) 302
BseAI TCCGGA 1 cut(s) 670
BseBI CCWGG 3 cut(s) 380, 662, 1120
BseCI ATCGAT 2 cut(s) 447, 861
BseGI GGATG 5 cut(s) 427, 588, 888, 1006, 1213
BseJI GATNNNNATC 1 cut(s) 302
BseLI CCNNNNNNNGG 6 cut(s) 241, 393, 598, 661, 829, 1012
BseMI GCAATG 2 cut(s) 535, 622
BseMII CTCAG 4 cut(s) 195, 327, 944, 998
BseNI ACTGG 1 cut(s) 982
BseRI GAGGAG 4 cut(s) 329, 341, 892, 926
BseSI GKGCMC 3 cut(s) 557, 799, 1033
BseXI GCAGC 5 cut(s) 151, 571, 750, 972, 1102
Bsh1236I CGCG 6 cut(s) 456, 490, 517, 551, 840, 875
Bsh1285I CGRYCG 2 cut(s) 631, 861
BshFI GGCC 5 cut(s) 68, 278, 405, 932, 1005
BshNI GGYRCC 2 cut(s) 83, 331
BshVI ATCGAT 2 cut(s) 447, 861
BsiEI CGRYCG 2 cut(s) 631, 861
BsiHKAI GWGCWC 2 cut(s) 557, 901
BsiHKCI CYCGRG 1 cut(s) 210
BsiSI CCGG 3 cut(s) 81, 349, 671
BslFI GGGAC 4 cut(s) 156, 184, 214, 409
BslI CCNNNNNNNGG 6 cut(s) 241, 393, 598, 661, 829, 1012
BsmAI GTCTC 3 cut(s) 200, 446, 551
BsmFI GGGAC 4 cut(s) 156, 184, 214, 409
BsnI GGCC 5 cut(s) 68, 278, 405, 932, 1005
Bso31I GGTCTC 1 cut(s) 551
BsoBI CYCGRG 1 cut(s) 210
Bsp1286I GDGCHC 6 cut(s) 288, 515, 557, 799, 901, 1033
Bsp13I TCCGGA 1 cut(s) 670
Bsp19I CCATGG 1 cut(s) 400
Bsp68I TCGCGA 2 cut(s) 517, 875
BspACI CCGC 6 cut(s) 64, 454, 456, 613, 793, 1112
BspANI GGCC 5 cut(s) 68, 278, 405, 932, 1005
BspCNI CTCAG 4 cut(s) 196, 328, 945, 999
BspDI ATCGAT 2 cut(s) 447, 861
BspEI TCCGGA 1 cut(s) 670
BspFNI CGCG 6 cut(s) 456, 490, 517, 551, 840, 875
BspLI GGNNCC 7 cut(s) 85, 171, 172, 285, 333, 397, 398
BspMAI CTGCAG 1 cut(s) 768
BspMI ACCTGC 4 cut(s) 618, 663, 1066, 1159
BspPI GGATC 3 cut(s) 264, 878, 978
BspQI GCTCTTC 1 cut(s) 1044
BspT107I GGYRCC 2 cut(s) 83, 331
BspTNI GGTCTC 1 cut(s) 551
BsrBI CCGCTC 1 cut(s) 793
BsrDI GCAATG 2 cut(s) 535, 622
BsrFI RCCGGY 1 cut(s) 80
BsrI ACTGG 1 cut(s) 982
BssAI RCCGGY 1 cut(s) 80
BssNI GRCGYC 1 cut(s) 332
BssSI CACGAG 1 cut(s) 1148
BssT1I CCWWGG 3 cut(s) 288, 400, 823
Bst2BI CACGAG 1 cut(s) 1148
Bst2UI CCWGG 3 cut(s) 380, 662, 1120
Bst4CI ACNGT 2 cut(s) 620, 1199
Bst6I CTCTTC 1 cut(s) 1044
BstACI GRCGYC 1 cut(s) 332
BstAPI GCANNNNNTGC 2 cut(s) 145, 561
BstBAI YACGTR 2 cut(s) 640, 800
BstC8I GCNNGC 8 cut(s) 66, 150, 191, 515, 553, 795, 855, 1225
BstDEI CTNAG 4 cut(s) 204, 336, 953, 1007
BstDSI CCRYGG 2 cut(s) 400, 454
BstEII GGTNACC 1 cut(s) 382
BstF5I GGATG 5 cut(s) 427, 588, 888, 1006, 1213
BstFNI CGCG 6 cut(s) 456, 490, 517, 551, 840, 875
BstH2I RGCGCY 1 cut(s) 335
BstHHI GCGC 3 cut(s) 334, 492, 739
BstMAI GTCTC 3 cut(s) 200, 446, 551
BstMCI CGRYCG 2 cut(s) 631, 861
BstMWI GCNNNNNNNGC 7 cut(s) 145, 158, 340, 411, 561, 772, 938
BstNI CCWGG 3 cut(s) 380, 662, 1120
BstPAI GACNNNNGTC 1 cut(s) 825
BstPI GGTNACC 1 cut(s) 382
BstSCI CCNGG 4 cut(s) 347, 378, 660, 1118
BstSFI CTRYAG 2 cut(s) 131, 764
BstSLI GKGCMC 3 cut(s) 557, 799, 1033
BstUI CGCG 6 cut(s) 456, 490, 517, 551, 840, 875
BstV1I GCAGC 5 cut(s) 151, 571, 750, 972, 1102
BstV2I GAAGAC 1 cut(s) 657
BstX2I RGATCY 6 cut(s) 127, 237, 256, 303, 497, 970
BstXI CCANNNNNNTGG 1 cut(s) 722
BstYI RGATCY 6 cut(s) 127, 237, 256, 303, 497, 970
Bsu15I ATCGAT 2 cut(s) 447, 861
Bsu36I CCTNAGG 1 cut(s) 1007
BsuI GTATCC 1 cut(s) 678
BsuRI GGCC 5 cut(s) 68, 278, 405, 932, 1005
BsuTUI ATCGAT 2 cut(s) 447, 861
BtgI CCRYGG 2 cut(s) 400, 454
BtsCI GGATG 5 cut(s) 427, 588, 888, 1006, 1213
BtsIMutI CAGTG 2 cut(s) 603, 950
BtuMI TCGCGA 2 cut(s) 517, 875
BveI ACCTGC 4 cut(s) 618, 663, 1066, 1159
Cac8I GCNNGC 8 cut(s) 66, 150, 191, 515, 553, 795, 855, 1225
CfoI GCGC 3 cut(s) 334, 492, 739
Cfr10I RCCGGY 1 cut(s) 80
Cfr13I GGNCC 4 cut(s) 66, 170, 396, 1078
Cfr42I CCGCGG 1 cut(s) 457
ClaI ATCGAT 2 cut(s) 447, 861
Csp6I GTAC 1 cut(s) 108
CviAII CATG 4 cut(s) 95, 145, 401, 716
CviQI GTAC 1 cut(s) 108
DdeI CTNAG 4 cut(s) 204, 336, 953, 1007
DinI GGCGCC 1 cut(s) 333
DraIII CACNNNGTG 1 cut(s) 561
EaeI YGGCCR 1 cut(s) 403
Eam1104I CTCTTC 1 cut(s) 1044
EarI CTCTTC 1 cut(s) 1044
Eco130I CCWWGG 3 cut(s) 288, 400, 823
Eco24I GRGCYC 2 cut(s) 288, 515
Eco31I GGTCTC 1 cut(s) 551
Eco47I GGWCC 3 cut(s) 170, 396, 1078
Eco57I CTGAAG 2 cut(s) 791, 1068
Eco72I CACGTG 2 cut(s) 640, 800
Eco81I CCTNAGG 1 cut(s) 1007
Eco88I CYCGRG 1 cut(s) 210
Eco91I GGTNACC 1 cut(s) 382
EcoO109I RGGNCCY 2 cut(s) 170, 396
EcoO65I GGTNACC 1 cut(s) 382
EcoRII CCWGG 3 cut(s) 378, 660, 1118
EcoT14I CCWWGG 3 cut(s) 288, 400, 823
EcoT38I GRGCYC 2 cut(s) 288, 515
EgeI GGCGCC 1 cut(s) 333
EheI GGCGCC 1 cut(s) 333
ErhI CCWWGG 3 cut(s) 288, 400, 823
FaeI CATG 4 cut(s) 98, 148, 404, 719
FaiI YATR 8 cut(s) 96, 146, 402, 597, 599, 717, 848, 908
FaqI GGGAC 4 cut(s) 156, 184, 214, 409
FatI CATG 4 cut(s) 94, 144, 400, 715
FauI CCCGC 3 cut(s) 57, 461, 786
FauNDI CATATG 1 cut(s) 597
Fnu4HI GCNGC 7 cut(s) 8, 140, 585, 764, 986, 1113, 1116
FokI GGATG 5 cut(s) 434, 575, 895, 1013, 1220
FriOI GRGCYC 2 cut(s) 288, 515
Fsp4HI GCNGC 7 cut(s) 8, 140, 585, 764, 986, 1113, 1116
GlaI GCGC 3 cut(s) 333, 491, 738
GluI GCNGC 7 cut(s) 8, 140, 585, 764, 986, 1113, 1116
GsuI CTGGAG 2 cut(s) 344, 492
HaeII RGCGCY 1 cut(s) 335
HaeIII GGCC 5 cut(s) 68, 278, 405, 932, 1005
HapII CCGG 3 cut(s) 81, 349, 671
HhaI GCGC 3 cut(s) 334, 492, 739
Hin1I GRCGYC 1 cut(s) 332
Hin1II CATG 4 cut(s) 98, 148, 404, 719
Hin6I GCGC 3 cut(s) 332, 490, 737
HinP1I GCGC 3 cut(s) 332, 490, 737
HincII GTYRAC 2 cut(s) 478, 1195
HindII GTYRAC 2 cut(s) 478, 1195
HinfI GANTC 5 cut(s) 58, 121, 208, 426, 1132
HpaII CCGG 3 cut(s) 81, 349, 671
HphI GGTGA 2 cut(s) 167, 973
Hpy166II GTNNAC 5 cut(s) 110, 478, 555, 964, 1195
Hpy188I TCNGA 7 cut(s) 27, 57, 283, 356, 431, 810, 1082
Hpy8I GTNNAC 5 cut(s) 110, 478, 555, 964, 1195
Hpy99I CGWCG 2 cut(s) 314, 924
HpyAV CCTTC 2 cut(s) 385, 1225
HpyCH4III ACNGT 2 cut(s) 620, 1199
HpyCH4IV ACGT 2 cut(s) 639, 799
HpyCH4V TGCA 6 cut(s) 148, 343, 555, 766, 988, 1183
HpyF10VI GCNNNNNNNGC 7 cut(s) 145, 158, 340, 411, 561, 772, 938
HpyF3I CTNAG 4 cut(s) 204, 336, 953, 1007
HpySE526I ACGT 2 cut(s) 639, 799
Hsp92I GRCGYC 1 cut(s) 332
Hsp92II CATG 4 cut(s) 98, 148, 404, 719
HspAI GCGC 3 cut(s) 332, 490, 737
KasI GGCGCC 1 cut(s) 331
KflI GGGWCCC 2 cut(s) 170, 396
Kpn2I TCCGGA 1 cut(s) 670
KspI CCGCGG 1 cut(s) 457
LguI GCTCTTC 1 cut(s) 1044
LmnI GCTCC 6 cut(s) 136, 283, 663, 772, 952, 1102
Lsp1109I GCAGC 5 cut(s) 151, 571, 750, 972, 1102
LweI GCATC 3 cut(s) 202, 330, 571
MaeII ACGT 2 cut(s) 639, 799
MaeIII GTNAC 3 cut(s) 382, 601, 635
MbiI CCGCTC 1 cut(s) 793
MboII GAAGA 3 cut(s) 86, 662, 1061
MflI RGATCY 6 cut(s) 127, 237, 256, 303, 497, 970
MhlI GDGCHC 6 cut(s) 288, 515, 557, 799, 901, 1033
MlsI TGGCCA 1 cut(s) 405
MluCI AATT 2 cut(s) 573, 709
MluNI TGGCCA 1 cut(s) 405
Mly113I GGCGCC 1 cut(s) 332
MlyI GAGTC 3 cut(s) 202, 435, 1126
MmeI TCCRAC 3 cut(s) 27, 870, 1080
Mox20I TGGCCA 1 cut(s) 405
MroI TCCGGA 1 cut(s) 670
MroXI GAANNNNTTC 1 cut(s) 1053
MscI TGGCCA 1 cut(s) 405
MseI TTAA 1 cut(s) 1202
MslI CAYNNNNRTG 1 cut(s) 642
Msp20I TGGCCA 1 cut(s) 405
MspA1I CMGCKG 2 cut(s) 64, 456
MspI CCGG 3 cut(s) 81, 349, 671
MspR9I CCNGG 4 cut(s) 349, 380, 662, 1120
MvaI CCWGG 3 cut(s) 380, 662, 1120
MvnI CGCG 6 cut(s) 456, 490, 517, 551, 840, 875
MwoI GCNNNNNNNGC 7 cut(s) 145, 158, 340, 411, 561, 772, 938
NarI GGCGCC 1 cut(s) 332
NciI CCSGG 1 cut(s) 349
NcoI CCATGG 1 cut(s) 400
NdeI CATATG 1 cut(s) 597
NlaIII CATG 4 cut(s) 98, 148, 404, 719
NlaIV GGNNCC 7 cut(s) 85, 171, 172, 285, 333, 397, 398
NmeAIII GCCGAG 3 cut(s) 94, 112, 958
NmuCI GTSAC 2 cut(s) 601, 635
NruI TCGCGA 2 cut(s) 517, 875
OliI CACNNNNGTG 1 cut(s) 642
PaeR7I CTCGAG 1 cut(s) 210
PciSI GCTCTTC 1 cut(s) 1044
PcsI WCGNNNNNNNCGW 1 cut(s) 645
PdmI GAANNNNTTC 1 cut(s) 1053
PfeI GAWTC 2 cut(s) 58, 121
PkrI GCNGC 7 cut(s) 9, 141, 586, 765, 987, 1114, 1117
Ple19I CGATCG 2 cut(s) 631, 861
PleI GAGTC 3 cut(s) 202, 434, 1126
PluTI GGCGCC 1 cut(s) 335
PmaCI CACGTG 2 cut(s) 640, 800
PmlI CACGTG 2 cut(s) 640, 800
PpsI GAGTC 3 cut(s) 202, 434, 1126
Ppu21I YACGTR 2 cut(s) 640, 800
PpuMI RGGWCCY 2 cut(s) 170, 396
PshAI GACNNNNGTC 1 cut(s) 825
Psp5II RGGWCCY 2 cut(s) 170, 396
Psp6I CCWGG 3 cut(s) 378, 660, 1118
PspCI CACGTG 2 cut(s) 640, 800
PspEI GGTNACC 1 cut(s) 382
PspGI CCWGG 3 cut(s) 378, 660, 1118
PspN4I GGNNCC 7 cut(s) 85, 171, 172, 285, 333, 397, 398
PspPI GGNCC 4 cut(s) 66, 170, 396, 1078
PspPPI RGGWCCY 2 cut(s) 170, 396
PstI CTGCAG 1 cut(s) 768
PsuI RGATCY 6 cut(s) 127, 237, 256, 303, 497, 970
PvuI CGATCG 2 cut(s) 631, 861
RgaI GCGATCGC 1 cut(s) 631
RruI TCGCGA 2 cut(s) 517, 875
RsaI GTAC 1 cut(s) 109
RsaNI GTAC 1 cut(s) 108
RseI CAYNNNNRTG 1 cut(s) 642
SacII CCGCGG 1 cut(s) 457
SapI GCTCTTC 1 cut(s) 1044
SaqAI TTAA 1 cut(s) 1202
SatI GCNGC 7 cut(s) 8, 140, 585, 764, 986, 1113, 1116
Sau96I GGNCC 4 cut(s) 66, 170, 396, 1078
SchI GAGTC 3 cut(s) 202, 435, 1126
ScrFI CCNGG 4 cut(s) 349, 380, 662, 1120
SduI GDGCHC 6 cut(s) 288, 515, 557, 799, 901, 1033
SfaAI GCGATCGC 1 cut(s) 631
SfaNI GCATC 3 cut(s) 202, 330, 571
SfcI CTRYAG 2 cut(s) 131, 764
SfoI GGCGCC 1 cut(s) 333
Sfr274I CTCGAG 1 cut(s) 210
Sfr303I CCGCGG 1 cut(s) 457
SgfI GCGATCGC 1 cut(s) 631
SgrBI CCGCGG 1 cut(s) 457
SinI GGWCC 3 cut(s) 170, 396, 1078
SlaI CTCGAG 1 cut(s) 210
SmiMI CAYNNNNRTG 1 cut(s) 642
SmlI CTYRAG 3 cut(s) 210, 493, 678
SmoI CTYRAG 3 cut(s) 210, 493, 678
Sse9I AATT 2 cut(s) 573, 709
SsiI CCGC 6 cut(s) 64, 454, 456, 613, 793, 1112
SspDI GGCGCC 1 cut(s) 331
StyD4I CCNGG 4 cut(s) 347, 378, 660, 1118
StyI CCWWGG 3 cut(s) 288, 400, 823
TaaI ACNGT 2 cut(s) 620, 1199
TaiI ACGT 2 cut(s) 642, 802
TaqI TCGA 7 cut(s) 36, 211, 312, 447, 783, 861, 1095
TasI AATT 2 cut(s) 573, 709
TauI GCSGC 1 cut(s) 1115
TfiI GAWTC 2 cut(s) 58, 121
Tru1I TTAA 1 cut(s) 1202
Tru9I TTAA 1 cut(s) 1202
TscAI CASTG 2 cut(s) 610, 957
TseFI GTSAC 2 cut(s) 601, 635
TseI GCWGC 6 cut(s) 7, 139, 584, 763, 985, 1115
Tsp45I GTSAC 2 cut(s) 601, 635
TspDTI ATGAA 1 cut(s) 722
TspGWI ACGGA 1 cut(s) 298
TspRI CASTG 2 cut(s) 610, 957
VneI GTGCAC 1 cut(s) 553
VpaK11BI GGWCC 3 cut(s) 170, 396, 1078
XcmI CCANNNNNNNNNTGG 4 cut(s) 182, 295, 407, 595
XhoI CTCGAG 1 cut(s) 210
XmnI GAANNNNTTC 1 cut(s) 1053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.