Rmu_ssc0000072.1_g000010

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000072.1
OG0000075
Physical Location & Seq
Reverse (-)
22474 .. 24694
2221 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000072.1_g000010.1.cds

Sequence Viewer

Length: 1698 bp
atgcctagcgaagcgtcgagcaagagcgacaacccatgtgttgatgttgaacctgataccattattcagggattgctgcgagaatcgcagacggcgaggcgagtggatgctgacctgccggataaagtccgtgtgaccgatcatcgggtgagtaggtcactacctgatgagatgtatttgaggaggtttcccgatgccgttctagagtatcttaatcagcgggccaaggagaaggttggaaccgaggggcatgaggttcgcggtgcttgggagcttactcgagatgcccaagagcaacccatgcaggcgggagaggtgggcgagctgccccaagtgtgctttggcgagcgtcagtcccccgagactcgggaagtgatgaggcagtcccctcaggtctcggtagggggggaggatcttggtgacttggctagggcctcggagcccacggtggaggtggagatctccgtcgaggagctgctagaggaggtacctgaggtgcaacccgagtctggagagggtataattggggttgctcaggttatcgagacggggacccaagatggcgagggggatgaagtacgagagtcggagacctgtgctcgtacagatgggatatggtcgaggaagaggacggcctcgcaacttcgtctcgggagtccctcggttggtcttgctatcgacactagtggtggtaagagatctcgggttgataatgtatcgcgctcgagatctatgagtgggggttcgcggggttctcacaatgaggttgtcaggggtctcgagcgtacattgggcaagatcagaattactgatggtgccatccttcatatggttgccgacctgcggaactgtcatcacgaccgcagccacgtgagtagggaagatccacgcttagggtaccggaaggctcaggagaggctgatgagggtatgtatcattgttgaccaaggtcaagtggaacacgaggatatgaggcgagcgattgacaatgggatcacgagaaggatggagttggagcgagcactcgcggttcgagaacgcgatgttgagttggagcttcgggcggctgcctttgagagtttggctccttatcccgatcgtgtggtggatttggaagggcaggttggaaatctacaaagggagattaatcgtctacgggatgttgagcttgaagcaggtgagagggaggcagagatggatcagctcaggaaggagttagccgagcaacagtctcggtcgagtagctttgccgaagaatgcatttgtctgcgtgctgctgccgagacacatcaggacaaactccgcaaggccagtcaggatagggcagacaaggcggtggacctctatctccggtcaagccatttccaagagaagatgaataaggccttctcggatggggtcttgcactcgattaaagatggtatcgttgcggggcggattgaccaagagaagatggtgtgtgacatgcaggtcaagaaagcagagagatcgcaagccagtgcagcgagtggtggtcggagttctagaatcgtgatcagggagcaggccgtgccggagcatgcatcaggacaagcgggcgatcacgaggcggaggttactattggcggacaggaggctcgtggccaagagggcaaggtgcaagaccagaatgtcggggagcgagacgtggtggaggaacgagatcgaagagaagagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

565

Amino Acids

62.98

Weight (kDa)

5.12

Isoelectric Point (pI)

51.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1166
AasI GACNNNNNNGTC 2 cut(s) 1469, 1649
Acc36I ACCTGC 5 cut(s) 123, 849, 1111, 1166, 1459
Acc65I GGTACC 2 cut(s) 487, 897
AccB1I GGYRCC 3 cut(s) 487, 815, 897
AccI GTMKAC 1 cut(s) 1153
AccII CGCG 5 cut(s) 261, 721, 748, 1028, 1041
AclWI GGATC 4 cut(s) 420, 878, 1001, 1206
AcoI YGGCCR 1 cut(s) 1621
AcvI CACGTG 1 cut(s) 871
AfaI GTAC 5 cut(s) 489, 579, 604, 787, 899
AfiI CCNNNNNNNGG 7 cut(s) 144, 366, 509, 665, 829, 843, 893
AgsI TTSAA 2 cut(s) 50, 1172
AhlI ACTAGT 1 cut(s) 683
AjiI CACGTC 1 cut(s) 1666
AjuI GAANNNNNNNTTGG 2 cut(s) 1107, 1139
AluBI AGCT 7 cut(s) 274, 325, 475, 1057, 1168, 1204, 1245
AluI AGCT 7 cut(s) 274, 325, 475, 1057, 1168, 1204, 1245
Alw21I GWGCWC 2 cut(s) 601, 1024
Alw26I GTCTC 9 cut(s) 356, 400, 539, 584, 653, 782, 1236, 1277, 1656
AlwI GGATC 4 cut(s) 420, 878, 1001, 1206
Ama87I CYCGRG 8 cut(s) 279, 359, 366, 503, 650, 702, 724, 779
AoxI GGCC 7 cut(s) 222, 432, 633, 1308, 1383, 1545, 1621
ApeKI GCWGC 8 cut(s) 76, 325, 475, 864, 1067, 1274, 1277, 1502
AseI ATTAAT 1 cut(s) 1146
Asp718I GGTACC 2 cut(s) 487, 897
AspLEI GCGC 1 cut(s) 723
AspS9I GGNCC 4 cut(s) 222, 432, 552, 1339
AsuHPI GGTGA 3 cut(s) 160, 431, 1190
AvaI CYCGRG 8 cut(s) 279, 359, 366, 503, 650, 702, 724, 779
AvaII GGWCC 2 cut(s) 552, 1339
AxyI CCTNAGG 2 cut(s) 390, 492
BalI TGGCCA 1 cut(s) 1623
BanI GGYRCC 3 cut(s) 487, 815, 897
BanII GRGCYC 1 cut(s) 444
BauI CACGAG 4 cut(s) 962, 997, 1583, 1617
BbrPI CACGTG 1 cut(s) 871
Bbv12I GWGCWC 2 cut(s) 601, 1024
BbvI GCAGC 8 cut(s) 63, 312, 462, 876, 1054, 1261, 1264, 1514
BccI CCATC 9 cut(s) 554, 602, 806, 827, 1000, 1189, 1388, 1412, 1447
BceAI ACGGC 4 cut(s) 108, 182, 648, 1532
BcgI CGANNNNNNTGC 6 cut(s) 239, 273, 1214, 1248, 1470, 1504
BclI TGATCA 1 cut(s) 1533
BcoDI GTCTC 9 cut(s) 356, 400, 539, 584, 653, 782, 1236, 1277, 1656
BcuI ACTAGT 1 cut(s) 683
BfaI CTAG 6 cut(s) 6, 203, 429, 479, 684, 1524
BfuAI ACCTGC 5 cut(s) 123, 849, 1111, 1166, 1459
BglI GCCNNNNNGGC 1 cut(s) 1629
BglII AGATCT 3 cut(s) 459, 698, 728
BisI GCNGC 9 cut(s) 77, 326, 476, 865, 1065, 1068, 1275, 1278, 1503
BlsI GCNGC 9 cut(s) 78, 327, 477, 866, 1066, 1069, 1276, 1279, 1504
Bme18I GGWCC 2 cut(s) 552, 1339
BmeT110I CYCGRG 8 cut(s) 279, 359, 366, 503, 650, 702, 724, 779
BmgBI CACGTC 1 cut(s) 1666
BmgT120I GGNCC 4 cut(s) 222, 432, 552, 1339
BmiI GGNNCC 8 cut(s) 241, 441, 489, 553, 554, 817, 899, 1086
BmsI GCATC 4 cut(s) 97, 184, 274, 1571
BoxI GACNNNNGTC 1 cut(s) 948
BplI GAGNNNNNCTC 2 cut(s) 1069, 1101
BpmI CTGGAG 1 cut(s) 531
Bpu10I CCTNAGC 4 cut(s) 534, 892, 909, 1205
BsaAI YACGTR 1 cut(s) 871
BsaI GGTCTC 3 cut(s) 400, 584, 782
BsaJI CCNNGG 6 cut(s) 225, 243, 435, 444, 660, 946
BsaWI WCCGGW 2 cut(s) 900, 1350
Bsc4I CCNNNNNNNGG 7 cut(s) 144, 366, 509, 665, 829, 843, 893
Bse1I ACTGG 2 cut(s) 1311, 1497
Bse21I CCTNAGG 2 cut(s) 390, 492
BseDI CCNNGG 6 cut(s) 225, 243, 435, 444, 660, 946
BseGI GGATG 6 cut(s) 112, 577, 819, 1011, 1165, 1399
BseLI CCNNNNNNNGG 7 cut(s) 144, 366, 509, 665, 829, 843, 893
BseMII CTCAG 5 cut(s) 404, 483, 548, 923, 1219
BseNI ACTGG 2 cut(s) 1311, 1497
BseRI GAGGAG 3 cut(s) 196, 485, 497
BseXI GCAGC 8 cut(s) 63, 312, 462, 876, 1054, 1261, 1264, 1514
BsgI GTGCAG 1 cut(s) 1521
Bsh1236I CGCG 5 cut(s) 261, 721, 748, 1028, 1041
Bsh1285I CGRYCG 3 cut(s) 862, 1099, 1238
BshFI GGCC 7 cut(s) 224, 434, 635, 1310, 1385, 1547, 1623
BshNI GGYRCC 3 cut(s) 487, 815, 897
BsiEI CGRYCG 3 cut(s) 862, 1099, 1238
BsiHKAI GWGCWC 2 cut(s) 601, 1024
BsiHKCI CYCGRG 8 cut(s) 279, 359, 366, 503, 650, 702, 724, 779
BsiSI CCGG 4 cut(s) 119, 901, 1351, 1553
BslFI GGGAC 4 cut(s) 340, 370, 565, 642
BslI CCNNNNNNNGG 7 cut(s) 144, 366, 509, 665, 829, 843, 893
BsmAI GTCTC 9 cut(s) 356, 400, 539, 584, 653, 782, 1236, 1277, 1656
BsmBI CGTCTC 3 cut(s) 539, 653, 1656
BsmFI GGGAC 4 cut(s) 340, 370, 565, 642
BsmI GAATGC 1 cut(s) 1262
BsnI GGCC 7 cut(s) 224, 434, 635, 1310, 1385, 1547, 1623
Bso31I GGTCTC 3 cut(s) 400, 584, 782
BsoBI CYCGRG 8 cut(s) 279, 359, 366, 503, 650, 702, 724, 779
Bsp1286I GDGCHC 3 cut(s) 444, 601, 1024
BspANI GGCC 7 cut(s) 224, 434, 635, 1310, 1385, 1547, 1623
BspCNI CTCAG 5 cut(s) 403, 484, 547, 922, 1218
BspFNI CGCG 5 cut(s) 261, 721, 748, 1028, 1041
BspLI GGNNCC 8 cut(s) 241, 441, 489, 553, 554, 817, 899, 1086
BspMI ACCTGC 5 cut(s) 123, 849, 1111, 1166, 1459
BspPI GGATC 4 cut(s) 420, 878, 1001, 1206
BspT107I GGYRCC 3 cut(s) 487, 815, 897
BspTNI GGTCTC 3 cut(s) 400, 584, 782
BsrI ACTGG 2 cut(s) 1311, 1497
BssECI CCNNGG 6 cut(s) 225, 243, 435, 444, 660, 946
BssSI CACGAG 4 cut(s) 962, 997, 1583, 1617
BssT1I CCWWGG 2 cut(s) 225, 946
Bst2BI CACGAG 4 cut(s) 962, 997, 1583, 1617
Bst4CI ACNGT 3 cut(s) 448, 851, 1230
Bst6I CTCTTC 3 cut(s) 620, 1681, 1686
BstAPI GCANNNNNTGC 2 cut(s) 301, 1549
BstBAI YACGTR 1 cut(s) 871
BstDEI CTNAG 6 cut(s) 390, 492, 534, 892, 909, 1205
BstDSI CCRYGG 1 cut(s) 444
BstF5I GGATG 6 cut(s) 112, 577, 819, 1011, 1165, 1399
BstFNI CGCG 5 cut(s) 261, 721, 748, 1028, 1041
BstHHI GCGC 1 cut(s) 723
BstMAI GTCTC 9 cut(s) 356, 400, 539, 584, 653, 782, 1236, 1277, 1656
BstMCI CGRYCG 3 cut(s) 862, 1099, 1238
BstMWI GCNNNNNNNGC 6 cut(s) 85, 301, 1331, 1502, 1549, 1629
BstNSI RCATGY 2 cut(s) 1468, 1562
BstPAI GACNNNNGTC 1 cut(s) 948
BstUI CGCG 5 cut(s) 261, 721, 748, 1028, 1041
BstV1I GCAGC 8 cut(s) 63, 312, 462, 876, 1054, 1261, 1264, 1514
BstX2I RGATCY 5 cut(s) 412, 459, 698, 728, 883
BstYI RGATCY 5 cut(s) 412, 459, 698, 728, 883
Bsu36I CCTNAGG 2 cut(s) 390, 492
BsuRI GGCC 7 cut(s) 224, 434, 635, 1310, 1385, 1547, 1623
BtgI CCRYGG 1 cut(s) 444
BtgZI GCGATG 1 cut(s) 1056
BtrI CACGTC 1 cut(s) 1666
BtsCI GGATG 6 cut(s) 112, 577, 819, 1011, 1165, 1399
BtsIMutI CAGTG 1 cut(s) 1504
BveI ACCTGC 5 cut(s) 123, 849, 1111, 1166, 1459
CfoI GCGC 1 cut(s) 723
Cfr13I GGNCC 4 cut(s) 222, 432, 552, 1339
CseI GACGC 2 cut(s) 3, 338
Csp6I GTAC 5 cut(s) 488, 578, 603, 786, 898
CviAII CATG 5 cut(s) 36, 251, 301, 1465, 1559
CviQI GTAC 5 cut(s) 488, 578, 603, 786, 898
DdeI CTNAG 6 cut(s) 390, 492, 534, 892, 909, 1205
DrdI GACNNNNNNGTC 2 cut(s) 1469, 1649
DseDI GACNNNNNNGTC 2 cut(s) 1469, 1649
EaeI YGGCCR 1 cut(s) 1621
Eam1104I CTCTTC 3 cut(s) 620, 1681, 1686
EarI CTCTTC 3 cut(s) 620, 1681, 1686
EciI GGCGGA 3 cut(s) 1450, 1604, 1620
Eco130I CCWWGG 2 cut(s) 225, 946
Eco147I AGGCCT 1 cut(s) 1385
Eco24I GRGCYC 1 cut(s) 444
Eco31I GGTCTC 3 cut(s) 400, 584, 782
Eco47I GGWCC 2 cut(s) 552, 1339
Eco72I CACGTG 1 cut(s) 871
Eco81I CCTNAGG 2 cut(s) 390, 492
Eco88I CYCGRG 8 cut(s) 279, 359, 366, 503, 650, 702, 724, 779
EcoO109I RGGNCCY 2 cut(s) 432, 552
EcoT14I CCWWGG 2 cut(s) 225, 946
EcoT22I ATGCAT 2 cut(s) 1262, 1564
EcoT38I GRGCYC 1 cut(s) 444
ErhI CCWWGG 2 cut(s) 225, 946
Esp3I CGTCTC 3 cut(s) 539, 653, 1656
FaeI CATG 5 cut(s) 39, 254, 304, 1468, 1562
FaqI GGGAC 4 cut(s) 340, 370, 565, 642
FatI CATG 5 cut(s) 35, 250, 300, 1464, 1558
FauI CCCGC 5 cut(s) 213, 301, 741, 1423, 1567
FauNDI CATATG 1 cut(s) 828
FbaI TGATCA 1 cut(s) 1533
FblI GTMKAC 1 cut(s) 1153
Fnu4HI GCNGC 9 cut(s) 77, 326, 476, 865, 1065, 1068, 1275, 1278, 1503
FokI GGATG 6 cut(s) 119, 584, 806, 1018, 1172, 1406
FriOI GRGCYC 1 cut(s) 444
Fsp4HI GCNGC 9 cut(s) 77, 326, 476, 865, 1065, 1068, 1275, 1278, 1503
FspBI CTAG 6 cut(s) 6, 203, 429, 479, 684, 1524
GlaI GCGC 1 cut(s) 722
GluI GCNGC 9 cut(s) 77, 326, 476, 865, 1065, 1068, 1275, 1278, 1503
GsuI CTGGAG 1 cut(s) 531
HaeIII GGCC 7 cut(s) 224, 434, 635, 1310, 1385, 1547, 1623
HapII CCGG 4 cut(s) 119, 901, 1351, 1553
HgaI GACGC 2 cut(s) 3, 338
HhaI GCGC 1 cut(s) 723
Hin1II CATG 5 cut(s) 39, 254, 304, 1468, 1562
Hin6I GCGC 1 cut(s) 721
HinP1I GCGC 1 cut(s) 721
HincII GTYRAC 1 cut(s) 943
HindII GTYRAC 1 cut(s) 943
HinfI GANTC 6 cut(s) 83, 364, 506, 584, 655, 1527
HpaII CCGG 4 cut(s) 119, 901, 1351, 1553
HphI GGTGA 3 cut(s) 160, 431, 1190
Hpy166II GTNNAC 3 cut(s) 943, 1154, 1339
Hpy188I TCNGA 5 cut(s) 439, 589, 803, 1393, 1518
Hpy8I GTNNAC 3 cut(s) 943, 1154, 1339
Hpy99I CGWCG 2 cut(s) 19, 470
HpyAV CCTTC 7 cut(s) 226, 833, 898, 996, 1109, 1204, 1396
HpyCH4III ACNGT 3 cut(s) 448, 851, 1230
HpyCH4IV ACGT 2 cut(s) 870, 1665
HpyCH4V TGCA 8 cut(s) 304, 499, 1260, 1405, 1468, 1502, 1562, 1639
HpyF10VI GCNNNNNNNGC 6 cut(s) 85, 301, 1331, 1502, 1549, 1629
HpyF3I CTNAG 6 cut(s) 390, 492, 534, 892, 909, 1205
HpySE526I ACGT 2 cut(s) 870, 1665
Hsp92II CATG 5 cut(s) 39, 254, 304, 1468, 1562
HspAI GCGC 1 cut(s) 721
KflI GGGWCCC 1 cut(s) 552
KpnI GGTACC 2 cut(s) 491, 901
Ksp22I TGATCA 1 cut(s) 1533
LmnI GCTCC 9 cut(s) 271, 439, 472, 1015, 1054, 1090, 1540, 1555, 1657
Lsp1109I GCAGC 8 cut(s) 63, 312, 462, 876, 1054, 1261, 1264, 1514
LweI GCATC 4 cut(s) 97, 184, 274, 1571
MaeI CTAG 6 cut(s) 6, 203, 429, 479, 684, 1524
MaeII ACGT 2 cut(s) 870, 1665
MaeIII GTNAC 5 cut(s) 133, 156, 419, 1460, 1594
MboII GAAGA 6 cut(s) 637, 893, 1265, 1384, 1462, 1698
MflI RGATCY 5 cut(s) 412, 459, 698, 728, 883
MhlI GDGCHC 3 cut(s) 444, 601, 1024
MlsI TGGCCA 1 cut(s) 1623
MluCI AATT 2 cut(s) 522, 804
MluNI TGGCCA 1 cut(s) 1623
MlyI GAGTC 4 cut(s) 358, 515, 593, 664
MmeI TCCRAC 6 cut(s) 217, 567, 993, 1032, 1105, 1496
Mox20I TGGCCA 1 cut(s) 1623
Mph1103I ATGCAT 2 cut(s) 1262, 1564
MscI TGGCCA 1 cut(s) 1623
MseI TTAA 3 cut(s) 213, 1146, 1413
Msp20I TGGCCA 1 cut(s) 1623
MspA1I CMGCKG 1 cut(s) 220
MspI CCGG 4 cut(s) 119, 901, 1351, 1553
Mva1269I GAATGC 1 cut(s) 1262
MvnI CGCG 5 cut(s) 261, 721, 748, 1028, 1041
MwoI GCNNNNNNNGC 6 cut(s) 85, 301, 1331, 1502, 1549, 1629
NdeI CATATG 1 cut(s) 828
NlaIII CATG 5 cut(s) 39, 254, 304, 1468, 1562
NlaIV GGNNCC 8 cut(s) 241, 441, 489, 553, 554, 817, 899, 1086
NmeAIII GCCGAG 2 cut(s) 1246, 1306
NmuCI GTSAC 4 cut(s) 133, 156, 419, 1460
NsiI ATGCAT 2 cut(s) 1262, 1564
NspI RCATGY 2 cut(s) 1468, 1562
PaeI GCATGC 1 cut(s) 1562
PaeR7I CTCGAG 3 cut(s) 279, 724, 779
PaqCI CACCTGC 1 cut(s) 1166
PceI AGGCCT 1 cut(s) 1385
PcsI WCGNNNNNNNCGW 1 cut(s) 92
PctI GAATGC 1 cut(s) 1262
PfeI GAWTC 2 cut(s) 83, 1527
PkrI GCNGC 9 cut(s) 78, 327, 477, 866, 1066, 1069, 1276, 1279, 1504
Ple19I CGATCG 1 cut(s) 1099
PleI GAGTC 4 cut(s) 358, 514, 592, 663
PmaCI CACGTG 1 cut(s) 871
PmlI CACGTG 1 cut(s) 871
PpsI GAGTC 4 cut(s) 358, 514, 592, 663
Ppu21I YACGTR 1 cut(s) 871
PpuMI RGGWCCY 1 cut(s) 552
PshAI GACNNNNGTC 1 cut(s) 948
PshBI ATTAAT 1 cut(s) 1146
Psp5II RGGWCCY 1 cut(s) 552
PspCI CACGTG 1 cut(s) 871
PspN4I GGNNCC 8 cut(s) 241, 441, 489, 553, 554, 817, 899, 1086
PspPI GGNCC 4 cut(s) 222, 432, 552, 1339
PspPPI RGGWCCY 1 cut(s) 552
PsuI RGATCY 5 cut(s) 412, 459, 698, 728, 883
PvuI CGATCG 1 cut(s) 1099
RsaI GTAC 5 cut(s) 489, 579, 604, 787, 899
RsaNI GTAC 5 cut(s) 488, 578, 603, 786, 898
SaqAI TTAA 3 cut(s) 213, 1146, 1413
SatI GCNGC 9 cut(s) 77, 326, 476, 865, 1065, 1068, 1275, 1278, 1503
Sau96I GGNCC 4 cut(s) 222, 432, 552, 1339
SchI GAGTC 4 cut(s) 358, 515, 593, 664
SduI GDGCHC 3 cut(s) 444, 601, 1024
SfaNI GCATC 4 cut(s) 97, 184, 274, 1571
Sfr274I CTCGAG 3 cut(s) 279, 724, 779
SinI GGWCC 2 cut(s) 552, 1339
SlaI CTCGAG 3 cut(s) 279, 724, 779
SmlI CTYRAG 3 cut(s) 279, 724, 779
SmoI CTYRAG 3 cut(s) 279, 724, 779
SpeI ACTAGT 1 cut(s) 683
SphI GCATGC 1 cut(s) 1562
Sse9I AATT 2 cut(s) 522, 804
SseBI AGGCCT 1 cut(s) 1385
SspMI CTAG 6 cut(s) 6, 203, 429, 479, 684, 1524
StuI AGGCCT 1 cut(s) 1385
StyI CCWWGG 2 cut(s) 225, 946
TaaI ACNGT 3 cut(s) 448, 851, 1230
TaiI ACGT 2 cut(s) 873, 1668
TaqII GACCGA 2 cut(s) 152, 1224
TasI AATT 2 cut(s) 522, 804
TauI GCSGC 1 cut(s) 1067
TfiI GAWTC 2 cut(s) 83, 1527
Tru1I TTAA 3 cut(s) 213, 1146, 1413
Tru9I TTAA 3 cut(s) 213, 1146, 1413
TscAI CASTG 1 cut(s) 1504
TseFI GTSAC 4 cut(s) 133, 156, 419, 1460
TseI GCWGC 8 cut(s) 76, 325, 475, 864, 1067, 1274, 1277, 1502
Tsp45I GTSAC 4 cut(s) 133, 156, 419, 1460
TspDTI ATGAA 3 cut(s) 588, 815, 1391
TspGWI ACGGA 2 cut(s) 119, 454
TspRI CASTG 1 cut(s) 1504
VpaK11BI GGWCC 2 cut(s) 552, 1339
VspI ATTAAT 1 cut(s) 1146
XbaI TCTAGA 2 cut(s) 202, 1523
XceI RCATGY 2 cut(s) 1468, 1562
XcmI CCANNNNNNNNNTGG 3 cut(s) 338, 451, 826
XhoI CTCGAG 3 cut(s) 279, 724, 779
XmiI GTMKAC 1 cut(s) 1153
XspI CTAG 6 cut(s) 6, 203, 429, 479, 684, 1524
Zsp2I ATGCAT 2 cut(s) 1262, 1564
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.