Rmu_sc0006803.1_g000056

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006803.1
OG0000075
Physical Location & Seq
Reverse (-)
272964 .. 274416
1453 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006803.1_g000056.1.cds

Sequence Viewer

Length: 1179 bp
atgcaactgcctaatgaagtatatttaaggtttctcgatagcgtgctggagtacctcaaccagcgtgccgaggaggaggcgggagtggtggagcgtggtgctgtgaatgagcactcaaagccgggggttgaagtggagatcttcgtcaaggagctattcgaagaagcagaacagcgcaagagcgatactagtgccagggctcgcctagtgcaggacgccgtgttggagcaattagatggctttttttatgttaataccgattgtccgggatcgcgggaagttattacagtcaacagcggggaggctgaggtcactagccaagctgttgatggcgcaattccggctgctgaggttcctgaagctcgacaggaggttggagagggcgacgtcaggggatttaggtcgaggaagaggactgcctcacagcttcttcttgggaatcccccggtgggtgtcaccgtcgatcctcgcagagggaagaggtctcgagttgatggtgtggcaagctcgagatctacaagtgggggctctcgaggttctcgtgatgaggtttctgggggtctagcacgcactcttggtgagattgggattacagatggtgccattttacatatggttgctgatttgcataattgccatagtgatcgcagtagtgtaaatgctgaagatcctcgtcttgggtatcgcgaggcccaagaaagactgatgagggctgtgaacatgaactatcaggcctccgtcgagctgctcgcgcattttgatcgggagatcgctcggctccaagaggagttagatgccgagagggagtgggcacgcgagttgcaggttgagaagtctcgtctgtgggaggctgaggatgttgttgcccccttgagggagtcaaatttggacttgactggcaagttgcatagggctgaggttggtttgaaagccctagagcaggttagaactcgggttggcattgctgaggagcatttgcaagagttggagaggcaggtccaggagcacgatgctgagttggagcttcatggcaccactttggaaagtttggctccctatcccgatcatgtaattgaattggagggtcagcttggcactttgcaaggagaagttgaccgcctgagggtcattaagcgtcaagctggcgagaaggatgcagttggggaaagagttggttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

392

Amino Acids

43.47

Weight (kDa)

4.92

Isoelectric Point (pI)

37.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 390
Acc36I ACCTGC 3 cut(s) 814, 931, 985
AccB1I GGYRCC 2 cut(s) 599, 1031
AccII CGCG 4 cut(s) 274, 687, 752, 816
AciI CCGC 4 cut(s) 80, 274, 297, 1117
AclWI GGATC 3 cut(s) 277, 458, 662
AcsI RAATTY 1 cut(s) 883
AcuI CTGAAG 2 cut(s) 378, 684
AcyI GRCGYC 2 cut(s) 216, 387
AfaI GTAC 1 cut(s) 53
AfiI CCNNNNNNNGG 8 cut(s) 211, 449, 473, 677, 873, 874, 940, 1123
AgsI TTSAA 3 cut(s) 131, 928, 1076
AhlI ACTAGT 1 cut(s) 188
AjnI CCWGG 2 cut(s) 194, 999
AluBI AGCT 9 cut(s) 154, 323, 362, 427, 507, 745, 1024, 1090, 1142
AluI AGCT 9 cut(s) 154, 323, 362, 427, 507, 745, 1024, 1090, 1142
Alw21I GWGCWC 2 cut(s) 114, 1008
Alw26I GTCTC 2 cut(s) 489, 840
AlwI GGATC 3 cut(s) 277, 458, 662
Ama87I CYCGRG 4 cut(s) 486, 508, 531, 951
AoxI GGCC 2 cut(s) 690, 732
ApeKI GCWGC 2 cut(s) 344, 745
ApoI RAATTY 1 cut(s) 883
AspLEI GCGC 3 cut(s) 177, 335, 754
AspS9I GGNCC 2 cut(s) 691, 997
AsuC2I CCSGG 3 cut(s) 123, 267, 446
AsuHPI GGTGA 2 cut(s) 448, 590
AsuII TTCGAA 1 cut(s) 159
AvaI CYCGRG 4 cut(s) 486, 508, 531, 951
AvaII GGWCC 1 cut(s) 997
AxyI CCTNAGG 1 cut(s) 1121
BaeGI GKGCMC 1 cut(s) 814
BanI GGYRCC 2 cut(s) 599, 1031
BanII GRGCYC 2 cut(s) 202, 530
BauI CACGAG 1 cut(s) 540
Bbv12I GWGCWC 2 cut(s) 114, 1008
BbvCI CCTCAGC 5 cut(s) 306, 348, 852, 915, 966
BbvI GCAGC 2 cut(s) 331, 732
BccI CCATC 4 cut(s) 230, 323, 488, 590
BceAI ACGGC 1 cut(s) 203
BcgI CGANNNNNNTGC 6 cut(s) 173, 207, 743, 777, 1136, 1170
BciT130I CCWGG 2 cut(s) 196, 1001
BcnI CCSGG 3 cut(s) 123, 267, 446
BcoDI GTCTC 2 cut(s) 489, 840
BcuI ACTAGT 1 cut(s) 188
BfaI CTAG 5 cut(s) 189, 206, 315, 563, 935
BfuAI ACCTGC 3 cut(s) 814, 931, 985
BglII AGATCT 2 cut(s) 138, 512
BisI GCNGC 2 cut(s) 345, 746
BlsI GCNGC 2 cut(s) 346, 747
Bme1390I CCNGG 5 cut(s) 123, 196, 267, 446, 1001
Bme18I GGWCC 1 cut(s) 997
BmeT110I CYCGRG 4 cut(s) 486, 508, 531, 951
BmgT120I GGNCC 2 cut(s) 691, 997
BmiI GGNNCC 5 cut(s) 354, 601, 779, 1033, 1053
BmrFI CCNGG 5 cut(s) 123, 196, 267, 446, 1001
BmsI GCATC 3 cut(s) 784, 1000, 1144
BpmI CTGGAG 1 cut(s) 68
Bpu10I CCTNAGC 5 cut(s) 306, 348, 852, 915, 966
Bpu14I TTCGAA 1 cut(s) 159
BpuEI CTTGAG 1 cut(s) 892
BpuMI CCSGG 3 cut(s) 123, 267, 446
BsaHI GRCGYC 2 cut(s) 216, 387
BsaI GGTCTC 1 cut(s) 489
BsaJI CCNNGG 4 cut(s) 69, 122, 195, 444
Bsc4I CCNNNNNNNGG 8 cut(s) 211, 449, 473, 677, 873, 874, 940, 1123
Bse1I ACTGG 1 cut(s) 901
Bse21I CCTNAGG 1 cut(s) 1121
Bse3DI GCAATG 1 cut(s) 960
BseBI CCWGG 2 cut(s) 196, 1001
BseDI CCNNGG 4 cut(s) 69, 122, 195, 444
BseGI GGATG 2 cut(s) 862, 1159
BseLI CCNNNNNNNGG 8 cut(s) 211, 449, 473, 677, 873, 874, 940, 1123
BseMI GCAATG 1 cut(s) 960
BseMII CTCAG 7 cut(s) 297, 339, 843, 906, 957, 1005, 1112
BseNI ACTGG 1 cut(s) 901
BseRI GAGGAG 4 cut(s) 86, 89, 800, 983
BseSI GKGCMC 1 cut(s) 814
BseXI GCAGC 2 cut(s) 331, 732
BsgI GTGCAG 1 cut(s) 230
Bsh1236I CGCG 4 cut(s) 274, 687, 752, 816
BshFI GGCC 2 cut(s) 692, 734
BshNI GGYRCC 2 cut(s) 599, 1031
BsiHKAI GWGCWC 2 cut(s) 114, 1008
BsiHKCI CYCGRG 4 cut(s) 486, 508, 531, 951
BsiSI CCGG 4 cut(s) 122, 266, 341, 446
BslI CCNNNNNNNGG 8 cut(s) 211, 449, 473, 677, 873, 874, 940, 1123
BsmAI GTCTC 2 cut(s) 489, 840
BsnI GGCC 2 cut(s) 692, 734
Bso31I GGTCTC 1 cut(s) 489
BsoBI CYCGRG 4 cut(s) 486, 508, 531, 951
Bsp119I TTCGAA 1 cut(s) 159
Bsp1286I GDGCHC 5 cut(s) 114, 202, 530, 814, 1008
Bsp143I GATC 9 cut(s) 138, 269, 463, 512, 643, 667, 760, 768, 1063
Bsp68I TCGCGA 1 cut(s) 687
BspACI CCGC 4 cut(s) 80, 274, 297, 1117
BspANI GGCC 2 cut(s) 692, 734
BspCNI CTCAG 7 cut(s) 298, 340, 844, 907, 958, 1006, 1113
BspFNI CGCG 4 cut(s) 274, 687, 752, 816
BspLI GGNNCC 5 cut(s) 354, 601, 779, 1033, 1053
BspMI ACCTGC 3 cut(s) 814, 931, 985
BspPI GGATC 3 cut(s) 277, 458, 662
BspT104I TTCGAA 1 cut(s) 159
BspT107I GGYRCC 2 cut(s) 599, 1031
BspTNI GGTCTC 1 cut(s) 489
BsrDI GCAATG 1 cut(s) 960
BsrI ACTGG 1 cut(s) 901
BssECI CCNNGG 4 cut(s) 69, 122, 195, 444
BssMI GATC 9 cut(s) 138, 269, 463, 512, 643, 667, 760, 768, 1063
BssNI GRCGYC 2 cut(s) 216, 387
BssSI CACGAG 1 cut(s) 540
Bst2BI CACGAG 1 cut(s) 540
Bst2UI CCWGG 2 cut(s) 196, 1001
Bst4CI ACNGT 2 cut(s) 289, 460
Bst6I CTCTTC 2 cut(s) 404, 473
BstACI GRCGYC 2 cut(s) 216, 387
BstBI TTCGAA 1 cut(s) 159
BstC8I GCNNGC 8 cut(s) 44, 66, 202, 505, 568, 750, 814, 1144
BstDEI CTNAG 7 cut(s) 306, 348, 852, 915, 966, 1014, 1121
BstENI CCTNNNNNAGG 3 cut(s) 209, 471, 938
BstF5I GGATG 2 cut(s) 862, 1159
BstFNI CGCG 4 cut(s) 274, 687, 752, 816
BstHHI GCGC 3 cut(s) 177, 335, 754
BstKTI GATC 9 cut(s) 141, 272, 466, 515, 646, 670, 763, 771, 1066
BstMAI GTCTC 2 cut(s) 489, 840
BstMBI GATC 9 cut(s) 138, 269, 463, 512, 643, 667, 760, 768, 1063
BstMWI GCNNNNNNNGC 3 cut(s) 118, 341, 751
BstNI CCWGG 2 cut(s) 196, 1001
BstSCI CCNGG 5 cut(s) 121, 194, 265, 444, 999
BstSLI GKGCMC 1 cut(s) 814
BstUI CGCG 4 cut(s) 274, 687, 752, 816
BstV1I GCAGC 2 cut(s) 331, 732
BstX2I RGATCY 3 cut(s) 138, 512, 667
BstYI RGATCY 3 cut(s) 138, 512, 667
Bsu36I CCTNAGG 1 cut(s) 1121
BsuRI GGCC 2 cut(s) 692, 734
BtsCI GGATG 2 cut(s) 862, 1159
BtuMI TCGCGA 1 cut(s) 687
BveI ACCTGC 3 cut(s) 814, 931, 985
Cac8I GCNNGC 8 cut(s) 44, 66, 202, 505, 568, 750, 814, 1144
CfoI GCGC 3 cut(s) 177, 335, 754
Cfr13I GGNCC 2 cut(s) 691, 997
CseI GACGC 2 cut(s) 224, 1124
Csp6I GTAC 1 cut(s) 52
CviAII CATG 3 cut(s) 721, 1028, 1067
CviQI GTAC 1 cut(s) 52
DdeI CTNAG 7 cut(s) 306, 348, 852, 915, 966, 1014, 1121
DpnI GATC 9 cut(s) 140, 271, 465, 514, 645, 669, 762, 770, 1065
DpnII GATC 9 cut(s) 138, 269, 463, 512, 643, 667, 760, 768, 1063
Eam1104I CTCTTC 2 cut(s) 404, 473
EarI CTCTTC 2 cut(s) 404, 473
Eco147I AGGCCT 1 cut(s) 734
Eco24I GRGCYC 2 cut(s) 202, 530
Eco31I GGTCTC 1 cut(s) 489
Eco47I GGWCC 1 cut(s) 997
Eco57I CTGAAG 2 cut(s) 378, 684
Eco81I CCTNAGG 1 cut(s) 1121
Eco88I CYCGRG 4 cut(s) 486, 508, 531, 951
EcoNI CCTNNNNNAGG 3 cut(s) 209, 471, 938
EcoRII CCWGG 2 cut(s) 194, 999
EcoT38I GRGCYC 2 cut(s) 202, 530
FaeI CATG 3 cut(s) 724, 1031, 1070
FatI CATG 3 cut(s) 720, 1027, 1066
FauI CCCGC 3 cut(s) 73, 267, 290
FauNDI CATATG 1 cut(s) 612
Fnu4HI GCNGC 2 cut(s) 345, 746
FokI GGATG 2 cut(s) 869, 1166
FriOI GRGCYC 2 cut(s) 202, 530
Fsp4HI GCNGC 2 cut(s) 345, 746
FspBI CTAG 5 cut(s) 189, 206, 315, 563, 935
GlaI GCGC 3 cut(s) 176, 334, 753
GluI GCNGC 2 cut(s) 345, 746
GsuI CTGGAG 1 cut(s) 68
HaeIII GGCC 2 cut(s) 692, 734
HapII CCGG 4 cut(s) 122, 266, 341, 446
HgaI GACGC 2 cut(s) 224, 1124
HhaI GCGC 3 cut(s) 177, 335, 754
Hin1I GRCGYC 2 cut(s) 216, 387
Hin1II CATG 3 cut(s) 724, 1031, 1070
Hin6I GCGC 3 cut(s) 175, 333, 752
HinP1I GCGC 3 cut(s) 175, 333, 752
HincII GTYRAC 2 cut(s) 292, 1114
HindII GTYRAC 2 cut(s) 292, 1114
HinfI GANTC 2 cut(s) 439, 878
HpaII CCGG 4 cut(s) 122, 266, 341, 446
HphI GGTGA 2 cut(s) 448, 590
Hpy166II GTNNAC 3 cut(s) 292, 718, 1114
Hpy188III TCNNGA 9 cut(s) 35, 356, 486, 510, 531, 542, 686, 764, 1061
Hpy8I GTNNAC 3 cut(s) 292, 718, 1114
Hpy99I CGWCG 3 cut(s) 389, 464, 743
HpyAV CCTTC 1 cut(s) 1144
HpyCH4III ACNGT 2 cut(s) 289, 460
HpyCH4IV ACGT 1 cut(s) 387
HpyCH4V TGCA 8 cut(s) 4, 211, 628, 823, 907, 979, 1102, 1157
HpyF10VI GCNNNNNNNGC 3 cut(s) 118, 341, 751
HpyF3I CTNAG 7 cut(s) 306, 348, 852, 915, 966, 1014, 1121
HpySE526I ACGT 1 cut(s) 387
Hsp92I GRCGYC 2 cut(s) 216, 387
Hsp92II CATG 3 cut(s) 724, 1031, 1070
HspAI GCGC 3 cut(s) 175, 333, 752
Kzo9I GATC 9 cut(s) 138, 269, 463, 512, 643, 667, 760, 768, 1063
LmnI GCTCC 8 cut(s) 91, 151, 226, 783, 970, 1003, 1021, 1057
Lsp1109I GCAGC 2 cut(s) 331, 732
LweI GCATC 3 cut(s) 784, 1000, 1144
MaeI CTAG 5 cut(s) 189, 206, 315, 563, 935
MaeII ACGT 1 cut(s) 387
MaeIII GTNAC 2 cut(s) 310, 454
MalI GATC 9 cut(s) 140, 271, 465, 514, 645, 669, 762, 770, 1065
MboI GATC 9 cut(s) 138, 269, 463, 512, 643, 667, 760, 768, 1063
MboII GAAGA 6 cut(s) 133, 173, 421, 422, 490, 677
MflI RGATCY 3 cut(s) 138, 512, 667
MhlI GDGCHC 5 cut(s) 114, 202, 530, 814, 1008
MluCI AATT 6 cut(s) 230, 336, 631, 883, 1071, 1076
MlyI GAGTC 1 cut(s) 887
MmeI TCCRAC 4 cut(s) 204, 355, 966, 999
MseI TTAA 3 cut(s) 26, 252, 1131
MspA1I CMGCKG 1 cut(s) 297
MspI CCGG 4 cut(s) 122, 266, 341, 446
MspR9I CCNGG 5 cut(s) 123, 196, 267, 446, 1001
MvaI CCWGG 2 cut(s) 196, 1001
MvnI CGCG 4 cut(s) 274, 687, 752, 816
MwoI GCNNNNNNNGC 3 cut(s) 118, 341, 751
NciI CCSGG 3 cut(s) 123, 267, 446
NdeI CATATG 1 cut(s) 612
NdeII GATC 9 cut(s) 138, 269, 463, 512, 643, 667, 760, 768, 1063
NlaIII CATG 3 cut(s) 724, 1031, 1070
NlaIV GGNNCC 5 cut(s) 354, 601, 779, 1033, 1053
NmeAIII GCCGAG 3 cut(s) 94, 754, 823
NmuCI GTSAC 2 cut(s) 310, 454
NruI TCGCGA 1 cut(s) 687
NspV TTCGAA 1 cut(s) 159
PaeR7I CTCGAG 3 cut(s) 486, 508, 531
PceI AGGCCT 1 cut(s) 734
PcsI WCGNNNNNNNCGW 1 cut(s) 538
PfeI GAWTC 1 cut(s) 439
PfoI TCCNGGA 2 cut(s) 265, 999
PkrI GCNGC 2 cut(s) 346, 747
PleI GAGTC 1 cut(s) 886
PpsI GAGTC 1 cut(s) 886
Psp6I CCWGG 2 cut(s) 194, 999
PspGI CCWGG 2 cut(s) 194, 999
PspN4I GGNNCC 5 cut(s) 354, 601, 779, 1033, 1053
PspPI GGNCC 2 cut(s) 691, 997
PsuI RGATCY 3 cut(s) 138, 512, 667
RruI TCGCGA 1 cut(s) 687
RsaI GTAC 1 cut(s) 53
RsaNI GTAC 1 cut(s) 52
SaqAI TTAA 3 cut(s) 26, 252, 1131
SatI GCNGC 2 cut(s) 345, 746
Sau3AI GATC 9 cut(s) 138, 269, 463, 512, 643, 667, 760, 768, 1063
Sau96I GGNCC 2 cut(s) 691, 997
SchI GAGTC 1 cut(s) 887
ScrFI CCNGG 5 cut(s) 123, 196, 267, 446, 1001
SduI GDGCHC 5 cut(s) 114, 202, 530, 814, 1008
SfaNI GCATC 3 cut(s) 784, 1000, 1144
Sfr274I CTCGAG 3 cut(s) 486, 508, 531
SfuI TTCGAA 1 cut(s) 159
SinI GGWCC 1 cut(s) 997
SlaI CTCGAG 3 cut(s) 486, 508, 531
SmlI CTYRAG 4 cut(s) 486, 508, 531, 871
SmoI CTYRAG 4 cut(s) 486, 508, 531, 871
SpeI ACTAGT 1 cut(s) 188
Sse9I AATT 6 cut(s) 230, 336, 631, 883, 1071, 1076
SseBI AGGCCT 1 cut(s) 734
SsiI CCGC 4 cut(s) 80, 274, 297, 1117
SspMI CTAG 5 cut(s) 189, 206, 315, 563, 935
StuI AGGCCT 1 cut(s) 734
StyD4I CCNGG 5 cut(s) 121, 194, 265, 444, 999
TaaI ACNGT 2 cut(s) 289, 460
TaiI ACGT 1 cut(s) 390
TaqI TCGA 9 cut(s) 36, 159, 364, 404, 462, 487, 509, 532, 741
TasI AATT 6 cut(s) 230, 336, 631, 883, 1071, 1076
TfiI GAWTC 1 cut(s) 439
Tru1I TTAA 3 cut(s) 26, 252, 1131
Tru9I TTAA 3 cut(s) 26, 252, 1131
TseFI GTSAC 2 cut(s) 310, 454
TseI GCWGC 2 cut(s) 344, 745
Tsp45I GTSAC 2 cut(s) 310, 454
TspDTI ATGAA 3 cut(s) 30, 737, 1016
TspGWI ACGGA 1 cut(s) 727
VpaK11BI GGWCC 1 cut(s) 997
XagI CCTNNNNNAGG 3 cut(s) 209, 471, 938
XapI RAATTY 1 cut(s) 883
XcmI CCANNNNNNNNNTGG 2 cut(s) 326, 610
XhoI CTCGAG 3 cut(s) 486, 508, 531
XspI CTAG 5 cut(s) 189, 206, 315, 563, 935
ZraI GACGTC 1 cut(s) 388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.