Rmu_sc0005229.1_g000005

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005229.1
OG0000075
Physical Location & Seq
Reverse (-)
4522 .. 6116
1595 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005229.1_g000005.1.cds

Sequence Viewer

Length: 1089 bp
atggatagtggggaggcggaggtgacgagccaggccgttggccagacagggctgacggtcgaggtgcccgaagtacagcccgagcttggagaggggtgtagtcgaagctgcccaagttgccgagatgggagcccaagacggcgagctgggaagaggttgagtatcagacacctgtgctcgtacggatggggttgggtcgaggaaaaggacggcgtctcaacttcatctcgggaatcccccaaggggggttcgctaggttctcgtgatgaggctgccgggggtctcgagtgtaccctcggcgagattgggatcacagatggcgccatcattcacatggtggctgatctgcggaactgttatcgccaccgcagccgtgtgaatgccaaggatccgtatctcgggtatcgggaggctcaggagaggttgatgagggctgtgaacttgaattatcatgcttcggccgagttggtggctcattttgatcgagagatagcgcgacttcagggggagctggaggccgagaggaatcgggtgcgcgagcttcagaatgcgcgggcagaggatggcctaaggttagtggagcaggttagggccccggtgatcgaggccgaggagcgtctgctagacttggaaaggcagagagaggtggaccgtttacgggatatggacttggaggaaggcgagagggaggcggagatggagcggctgaggaaggagttagctgaggagcgggcacgagcaagtaacttcgctgaagattgtctcagcctgcgcgctgctgtcgagacgcaccaggacaagctcgccaaggctaggcgggatggtgcagataaggccgtggatctctatctccggacagatcattttcgagagaggatgaacaaagccttctcggatggggccttgcacttaattcgggatggtatcgctgccgattggattgaccaggagaagatggactcagctatatcagagcctacaccgggtcaagctggcgatcgtgaggcgggtgatgctactggcgagcaaaaggtcgatggtcaagtcaaggtgcgagacgataatgttgagggacgagacatggcgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

362

Amino Acids

40.44

Weight (kDa)

5.08

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 574
AccB1I GGYRCC 2 cut(s) 64, 320
AccBSI CCGCTC 2 cut(s) 703, 730
AccII CGCG 4 cut(s) 496, 537, 553, 774
AccIII TCCGGA 1 cut(s) 852
AciI CCGC 9 cut(s) 17, 349, 367, 553, 692, 703, 730, 817, 1007
AclWI GGATC 4 cut(s) 317, 383, 396, 849
AcoI YGGCCR 2 cut(s) 40, 459
AcuI CTGAAG 3 cut(s) 485, 527, 774
AcyI GRCGYC 2 cut(s) 213, 321
AdeI CACNNNGTG 1 cut(s) 337
AfaI GTAC 3 cut(s) 75, 182, 292
AfiI CCNNNNNNNGG 8 cut(s) 86, 243, 244, 245, 398, 658, 813, 983
AgsI TTSAA 1 cut(s) 445
AjnI CCWGG 3 cut(s) 30, 792, 945
AluBI AGCT 9 cut(s) 85, 108, 146, 511, 541, 722, 802, 965, 992
AluI AGCT 9 cut(s) 85, 108, 146, 511, 541, 722, 802, 965, 992
Alw21I GWGCWC 1 cut(s) 179
Alw26I GTCTC 6 cut(s) 220, 287, 767, 779, 1050, 1071
AlwI GGATC 4 cut(s) 317, 383, 396, 849
Ama87I CYCGRG 4 cut(s) 80, 228, 284, 398
Aor13HI TCCGGA 1 cut(s) 852
AoxI GGCC 9 cut(s) 33, 40, 459, 516, 565, 591, 606, 834, 900
ApaI GGGCCC 1 cut(s) 595
ApeKI GCWGC 5 cut(s) 108, 272, 369, 776, 929
AspLEI GCGC 6 cut(s) 323, 496, 537, 553, 774, 776
AspS9I GGNCC 4 cut(s) 591, 592, 649, 900
AsuC2I CCSGG 3 cut(s) 277, 596, 984
AsuHPI GGTGA 3 cut(s) 34, 610, 1022
AvaI CYCGRG 4 cut(s) 80, 228, 284, 398
AvaII GGWCC 1 cut(s) 649
AxyI CCTNAGG 1 cut(s) 569
BaeGI GKGCMC 3 cut(s) 69, 595, 736
BalI TGGCCA 1 cut(s) 42
BamHI GGATCC 1 cut(s) 388
BanI GGYRCC 2 cut(s) 64, 320
BanII GRGCYC 2 cut(s) 134, 595
BauI CACGAG 2 cut(s) 261, 735
Bbv12I GWGCWC 1 cut(s) 179
BbvCI CCTCAGC 2 cut(s) 707, 723
BbvI GCAGC 5 cut(s) 95, 259, 381, 763, 916
BceAI ACGGC 5 cut(s) 20, 155, 226, 357, 821
BcgI CGANNNNNNTGC 2 cut(s) 896, 930
BciT130I CCWGG 3 cut(s) 32, 794, 947
BcnI CCSGG 3 cut(s) 277, 596, 984
BcoDI GTCTC 6 cut(s) 220, 287, 767, 779, 1050, 1071
BfaI CTAG 3 cut(s) 254, 623, 813
BfoI RGCGCY 1 cut(s) 324
BfuAI ACCTGC 1 cut(s) 574
BisI GCNGC 6 cut(s) 109, 273, 370, 704, 777, 930
BlsI GCNGC 6 cut(s) 110, 274, 371, 705, 778, 931
Bme1390I CCNGG 6 cut(s) 32, 277, 596, 794, 947, 984
Bme18I GGWCC 1 cut(s) 649
BmeT110I CYCGRG 4 cut(s) 80, 228, 284, 398
BmgT120I GGNCC 4 cut(s) 591, 592, 649, 900
BmiI GGNNCC 7 cut(s) 66, 131, 322, 390, 593, 594, 901
BmrFI CCNGG 6 cut(s) 32, 277, 596, 794, 947, 984
BmsI GCATC 1 cut(s) 1003
BpmI CTGGAG 1 cut(s) 533
Bpu10I CCTNAGC 3 cut(s) 414, 707, 723
BpuMI CCSGG 3 cut(s) 277, 596, 984
BsaBI GATNNNNATC 3 cut(s) 308, 393, 846
BsaHI GRCGYC 2 cut(s) 213, 321
BsaI GGTCTC 1 cut(s) 287
BsaJI CCNNGG 8 cut(s) 240, 276, 295, 384, 594, 609, 807, 837
BsaWI WCCGGW 1 cut(s) 852
Bsc4I CCNNNNNNNGG 8 cut(s) 86, 243, 244, 245, 398, 658, 813, 983
Bse1I ACTGG 1 cut(s) 1024
Bse21I CCTNAGG 1 cut(s) 569
Bse8I GATNNNNATC 3 cut(s) 308, 393, 846
BseAI TCCGGA 1 cut(s) 852
BseBI CCWGG 3 cut(s) 32, 794, 947
BseDI CCNNGG 8 cut(s) 240, 276, 295, 384, 594, 609, 807, 837
BseGI GGATG 6 cut(s) 191, 568, 826, 882, 901, 925
BseJI GATNNNNATC 3 cut(s) 308, 393, 846
BseLI CCNNNNNNNGG 8 cut(s) 86, 243, 244, 245, 398, 658, 813, 983
BseMII CTCAG 5 cut(s) 428, 698, 714, 778, 975
BseNI ACTGG 1 cut(s) 1024
BsePI GCGCGC 1 cut(s) 772
BseRI GAGGAG 2 cut(s) 626, 740
BseSI GKGCMC 3 cut(s) 69, 595, 736
BseX3I CGGCCG 1 cut(s) 459
BseXI GCAGC 5 cut(s) 95, 259, 381, 763, 916
BseYI CCCAGC 1 cut(s) 146
BsgI GTGCAG 1 cut(s) 846
Bsh1236I CGCG 4 cut(s) 496, 537, 553, 774
Bsh1285I CGRYCG 3 cut(s) 60, 462, 1000
BshFI GGCC 9 cut(s) 35, 42, 461, 518, 567, 593, 608, 836, 902
BshNI GGYRCC 2 cut(s) 64, 320
BsiEI CGRYCG 3 cut(s) 60, 462, 1000
BsiHKAI GWGCWC 1 cut(s) 179
BsiHKCI CYCGRG 4 cut(s) 80, 228, 284, 398
BsiSI CCGG 4 cut(s) 276, 596, 853, 983
BsiWI CGTACG 1 cut(s) 180
BslI CCNNNNNNNGG 8 cut(s) 86, 243, 244, 245, 398, 658, 813, 983
BsmAI GTCTC 6 cut(s) 220, 287, 767, 779, 1050, 1071
BsmBI CGTCTC 3 cut(s) 220, 779, 1050
BsmI GAATGC 2 cut(s) 385, 553
BsnI GGCC 9 cut(s) 35, 42, 461, 518, 567, 593, 608, 836, 902
Bso31I GGTCTC 1 cut(s) 287
BsoBI CYCGRG 4 cut(s) 80, 228, 284, 398
Bsp120I GGGCCC 1 cut(s) 591
Bsp1286I GDGCHC 5 cut(s) 69, 134, 179, 595, 736
Bsp13I TCCGGA 1 cut(s) 852
Bsp143I GATC 8 cut(s) 309, 343, 388, 481, 600, 841, 859, 997
BspACI CCGC 9 cut(s) 17, 349, 367, 553, 692, 703, 730, 817, 1007
BspANI GGCC 9 cut(s) 35, 42, 461, 518, 567, 593, 608, 836, 902
BspCNI CTCAG 5 cut(s) 427, 699, 715, 777, 974
BspEI TCCGGA 1 cut(s) 852
BspFNI CGCG 4 cut(s) 496, 537, 553, 774
BspLI GGNNCC 7 cut(s) 66, 131, 322, 390, 593, 594, 901
BspMI ACCTGC 1 cut(s) 574
BspPI GGATC 4 cut(s) 317, 383, 396, 849
BspT107I GGYRCC 2 cut(s) 64, 320
BspTNI GGTCTC 1 cut(s) 287
BsrBI CCGCTC 2 cut(s) 703, 730
BsrI ACTGG 1 cut(s) 1024
BssECI CCNNGG 8 cut(s) 240, 276, 295, 384, 594, 609, 807, 837
BssHII GCGCGC 1 cut(s) 772
BssMI GATC 8 cut(s) 309, 343, 388, 481, 600, 841, 859, 997
BssNI GRCGYC 2 cut(s) 213, 321
BssSI CACGAG 2 cut(s) 261, 735
BssT1I CCWWGG 3 cut(s) 240, 384, 807
Bst2BI CACGAG 2 cut(s) 261, 735
Bst2UI CCWGG 3 cut(s) 32, 794, 947
Bst4CI ACNGT 3 cut(s) 58, 356, 653
Bst6I CTCTTC 1 cut(s) 146
BstACI GRCGYC 2 cut(s) 213, 321
BstC8I GCNNGC 9 cut(s) 144, 539, 555, 732, 770, 774, 804, 994, 1025
BstDEI CTNAG 6 cut(s) 414, 569, 707, 723, 764, 961
BstDSI CCRYGG 1 cut(s) 837
BstF5I GGATG 6 cut(s) 191, 568, 826, 882, 901, 925
BstFNI CGCG 4 cut(s) 496, 537, 553, 774
BstH2I RGCGCY 1 cut(s) 324
BstHHI GCGC 6 cut(s) 323, 496, 537, 553, 774, 776
BstKTI GATC 8 cut(s) 312, 346, 391, 484, 603, 844, 862, 1000
BstMAI GTCTC 6 cut(s) 220, 287, 767, 779, 1050, 1071
BstMBI GATC 8 cut(s) 309, 343, 388, 481, 600, 841, 859, 997
BstMCI CGRYCG 3 cut(s) 60, 462, 1000
BstMWI GCNNNNNNNGC 4 cut(s) 117, 369, 833, 1013
BstNI CCWGG 3 cut(s) 32, 794, 947
BstSCI CCNGG 6 cut(s) 30, 275, 594, 792, 945, 982
BstSLI GKGCMC 3 cut(s) 69, 595, 736
BstUI CGCG 4 cut(s) 496, 537, 553, 774
BstV1I GCAGC 5 cut(s) 95, 259, 381, 763, 916
BstX2I RGATCY 2 cut(s) 388, 841
BstXI CCANNNNNNTGG 1 cut(s) 38
BstYI RGATCY 2 cut(s) 388, 841
BstZI CGGCCG 1 cut(s) 459
Bsu36I CCTNAGG 1 cut(s) 569
BsuRI GGCC 9 cut(s) 35, 42, 461, 518, 567, 593, 608, 836, 902
BtgI CCRYGG 1 cut(s) 837
BtsCI GGATG 6 cut(s) 191, 568, 826, 882, 901, 925
BveI ACCTGC 1 cut(s) 574
Cac8I GCNNGC 9 cut(s) 144, 539, 555, 732, 770, 774, 804, 994, 1025
CfoI GCGC 6 cut(s) 323, 496, 537, 553, 774, 776
Cfr13I GGNCC 4 cut(s) 591, 592, 649, 900
CseI GACGC 3 cut(s) 202, 605, 796
Csp6I GTAC 3 cut(s) 74, 181, 291
CviAII CATG 3 cut(s) 334, 452, 1081
CviQI GTAC 3 cut(s) 74, 181, 291
DdeI CTNAG 6 cut(s) 414, 569, 707, 723, 764, 961
DinI GGCGCC 1 cut(s) 322
DpnI GATC 8 cut(s) 311, 345, 390, 483, 602, 843, 861, 999
DpnII GATC 8 cut(s) 309, 343, 388, 481, 600, 841, 859, 997
DraIII CACNNNGTG 1 cut(s) 337
EaeI YGGCCR 2 cut(s) 40, 459
EagI CGGCCG 1 cut(s) 459
Eam1104I CTCTTC 1 cut(s) 146
EarI CTCTTC 1 cut(s) 146
EciI GGCGGA 2 cut(s) 32, 707
EclXI CGGCCG 1 cut(s) 459
Eco130I CCWWGG 3 cut(s) 240, 384, 807
Eco24I GRGCYC 2 cut(s) 134, 595
Eco31I GGTCTC 1 cut(s) 287
Eco47I GGWCC 1 cut(s) 649
Eco52I CGGCCG 1 cut(s) 459
Eco57I CTGAAG 3 cut(s) 485, 527, 774
Eco81I CCTNAGG 1 cut(s) 569
Eco88I CYCGRG 4 cut(s) 80, 228, 284, 398
EcoO109I RGGNCCY 3 cut(s) 591, 592, 900
EcoRII CCWGG 3 cut(s) 30, 792, 945
EcoT14I CCWWGG 3 cut(s) 240, 384, 807
EcoT38I GRGCYC 2 cut(s) 134, 595
EgeI GGCGCC 1 cut(s) 322
EheI GGCGCC 1 cut(s) 322
ErhI CCWWGG 3 cut(s) 240, 384, 807
Esp3I CGTCTC 3 cut(s) 220, 779, 1050
FaeI CATG 3 cut(s) 337, 455, 1084
FaiI YATR 5 cut(s) 335, 453, 665, 968, 1082
FatI CATG 3 cut(s) 333, 451, 1080
FauI CCCGC 4 cut(s) 546, 723, 810, 1000
Fnu4HI GCNGC 6 cut(s) 109, 273, 370, 704, 777, 930
FokI GGATG 6 cut(s) 198, 575, 833, 889, 908, 932
FriOI GRGCYC 2 cut(s) 134, 595
Fsp4HI GCNGC 6 cut(s) 109, 273, 370, 704, 777, 930
FspBI CTAG 3 cut(s) 254, 623, 813
GlaI GCGC 6 cut(s) 322, 495, 536, 552, 773, 775
GluI GCNGC 6 cut(s) 109, 273, 370, 704, 777, 930
GsaI CCCAGC 1 cut(s) 150
GsuI CTGGAG 1 cut(s) 533
HaeII RGCGCY 1 cut(s) 324
HaeIII GGCC 9 cut(s) 35, 42, 461, 518, 567, 593, 608, 836, 902
HapII CCGG 4 cut(s) 276, 596, 853, 983
HgaI GACGC 3 cut(s) 202, 605, 796
HhaI GCGC 6 cut(s) 323, 496, 537, 553, 774, 776
Hin1I GRCGYC 2 cut(s) 213, 321
Hin1II CATG 3 cut(s) 337, 455, 1084
Hin6I GCGC 6 cut(s) 321, 494, 535, 551, 772, 774
HinP1I GCGC 6 cut(s) 321, 494, 535, 551, 772, 774
HinfI GANTC 3 cut(s) 233, 526, 959
HpaII CCGG 4 cut(s) 276, 596, 853, 983
HphI GGTGA 3 cut(s) 34, 610, 1022
Hpy166II GTNNAC 4 cut(s) 291, 439, 649, 656
Hpy188I TCNGA 4 cut(s) 167, 546, 895, 973
Hpy8I GTNNAC 4 cut(s) 291, 439, 649, 656
HpyAV CCTTC 3 cut(s) 671, 706, 898
HpyCH4III ACNGT 3 cut(s) 58, 356, 653
HpyCH4V TGCA 2 cut(s) 827, 907
HpyF10VI GCNNNNNNNGC 4 cut(s) 117, 369, 833, 1013
HpyF3I CTNAG 6 cut(s) 414, 569, 707, 723, 764, 961
Hsp92I GRCGYC 2 cut(s) 213, 321
Hsp92II CATG 3 cut(s) 337, 455, 1084
HspAI GCGC 6 cut(s) 321, 494, 535, 551, 772, 774
KasI GGCGCC 1 cut(s) 320
Kpn2I TCCGGA 1 cut(s) 852
Kzo9I GATC 8 cut(s) 309, 343, 388, 481, 600, 841, 859, 997
LmnI GCTCC 6 cut(s) 129, 508, 580, 613, 700, 727
Lsp1109I GCAGC 5 cut(s) 95, 259, 381, 763, 916
LweI GCATC 1 cut(s) 1003
MaeI CTAG 3 cut(s) 254, 623, 813
MaeIII GTNAC 2 cut(s) 22, 743
MalI GATC 8 cut(s) 311, 345, 390, 483, 602, 843, 861, 999
MbiI CCGCTC 2 cut(s) 703, 730
MboI GATC 8 cut(s) 309, 343, 388, 481, 600, 841, 859, 997
MboII GAAGA 3 cut(s) 163, 767, 964
MflI RGATCY 2 cut(s) 388, 841
MhlI GDGCHC 5 cut(s) 69, 134, 179, 595, 736
MlsI TGGCCA 1 cut(s) 42
MluCI AATT 2 cut(s) 445, 912
MluNI TGGCCA 1 cut(s) 42
Mly113I GGCGCC 1 cut(s) 321
MlyI GAGTC 1 cut(s) 953
Mox20I TGGCCA 1 cut(s) 42
MroI TCCGGA 1 cut(s) 852
MscI TGGCCA 1 cut(s) 42
MseI TTAA 1 cut(s) 911
MslI CAYNNNNRTG 1 cut(s) 332
Msp20I TGGCCA 1 cut(s) 42
MspI CCGG 4 cut(s) 276, 596, 853, 983
MspR9I CCNGG 6 cut(s) 32, 277, 596, 794, 947, 984
Mva1269I GAATGC 2 cut(s) 385, 553
MvaI CCWGG 3 cut(s) 32, 794, 947
MvnI CGCG 4 cut(s) 496, 537, 553, 774
MwoI GCNNNNNNNGC 4 cut(s) 117, 369, 833, 1013
NarI GGCGCC 1 cut(s) 321
NciI CCSGG 3 cut(s) 277, 596, 984
NdeII GATC 8 cut(s) 309, 343, 388, 481, 600, 841, 859, 997
NlaIII CATG 3 cut(s) 337, 455, 1084
NlaIV GGNNCC 7 cut(s) 66, 131, 322, 390, 593, 594, 901
NmeAIII GCCGAG 5 cut(s) 146, 276, 487, 544, 634
NmuCI GTSAC 1 cut(s) 22
PaeR7I CTCGAG 1 cut(s) 284
PauI GCGCGC 1 cut(s) 772
PcsI WCGNNNNNNNCGW 1 cut(s) 66
PctI GAATGC 2 cut(s) 385, 553
PfeI GAWTC 2 cut(s) 233, 526
Pfl23II CGTACG 1 cut(s) 180
PflFI GACNNNGTC 1 cut(s) 212
PkrI GCNGC 6 cut(s) 110, 274, 371, 705, 778, 931
Ple19I CGATCG 1 cut(s) 1000
PleI GAGTC 1 cut(s) 953
PluTI GGCGCC 1 cut(s) 324
PpsI GAGTC 1 cut(s) 953
Psp6I CCWGG 3 cut(s) 30, 792, 945
PspFI CCCAGC 1 cut(s) 146
PspGI CCWGG 3 cut(s) 30, 792, 945
PspLI CGTACG 1 cut(s) 180
PspN4I GGNNCC 7 cut(s) 66, 131, 322, 390, 593, 594, 901
PspOMI GGGCCC 1 cut(s) 591
PspPI GGNCC 4 cut(s) 591, 592, 649, 900
PsuI RGATCY 2 cut(s) 388, 841
PsyI GACNNNGTC 1 cut(s) 212
PteI GCGCGC 1 cut(s) 772
PvuI CGATCG 1 cut(s) 1000
RsaI GTAC 3 cut(s) 75, 182, 292
RsaNI GTAC 3 cut(s) 74, 181, 291
RseI CAYNNNNRTG 1 cut(s) 332
SaqAI TTAA 1 cut(s) 911
SatI GCNGC 6 cut(s) 109, 273, 370, 704, 777, 930
Sau3AI GATC 8 cut(s) 309, 343, 388, 481, 600, 841, 859, 997
Sau96I GGNCC 4 cut(s) 591, 592, 649, 900
SchI GAGTC 1 cut(s) 953
ScrFI CCNGG 6 cut(s) 32, 277, 596, 794, 947, 984
SduI GDGCHC 5 cut(s) 69, 134, 179, 595, 736
SfaNI GCATC 1 cut(s) 1003
SfoI GGCGCC 1 cut(s) 322
Sfr274I CTCGAG 1 cut(s) 284
SinI GGWCC 1 cut(s) 649
SlaI CTCGAG 1 cut(s) 284
SmiMI CAYNNNNRTG 1 cut(s) 332
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
Sse9I AATT 2 cut(s) 445, 912
SsiI CCGC 9 cut(s) 17, 349, 367, 553, 692, 703, 730, 817, 1007
SspDI GGCGCC 1 cut(s) 320
SspMI CTAG 3 cut(s) 254, 623, 813
StyD4I CCNGG 6 cut(s) 30, 275, 594, 792, 945, 982
StyI CCWWGG 3 cut(s) 240, 384, 807
TaaI ACNGT 3 cut(s) 58, 356, 653
TaqI TCGA 9 cut(s) 60, 103, 198, 285, 484, 603, 783, 868, 1035
TasI AATT 2 cut(s) 445, 912
TatI WGTACW 1 cut(s) 73
TauI GCSGC 1 cut(s) 706
TfiI GAWTC 2 cut(s) 233, 526
Tru1I TTAA 1 cut(s) 911
Tru9I TTAA 1 cut(s) 911
TseFI GTSAC 1 cut(s) 22
TseI GCWGC 5 cut(s) 108, 272, 369, 776, 929
Tsp45I GTSAC 1 cut(s) 22
TspDTI ATGAA 2 cut(s) 213, 893
TspGWI ACGGA 2 cut(s) 198, 381
Tth111I GACNNNGTC 1 cut(s) 212
VpaK11BI GGWCC 1 cut(s) 649
XcmI CCANNNNNNNNNTGG 1 cut(s) 331
XhoI CTCGAG 1 cut(s) 284
XspI CTAG 3 cut(s) 254, 623, 813
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.