Rmu_ssc0000116.1_g000041

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000116.1
OG0000075
Physical Location & Seq
Forward (+)
193648 .. 196346
2699 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000116.1_g000041.1.cds

Sequence Viewer

Length: 1395 bp
atggtgagggggatggggtctgagtgtcggacacgtgtgctcgtacggatgggatcgggtcgaggaagaggacggcctcgcagcttcgtctctggagtcccccagttggtgttattatcgacacttgtggtagtaagaggtctccggttgataatgtgtctccctcgggatctacaagtgggggtttacagggttctcgcgatgaggtttccaggggtctcgcgcacaccctgggcgagattggaattaccgatggcgccatccttcacatggttgctgacttgtgaaactgttatcaagatcgtggctgtgaacctgaattaccactcctcgggtgagttggtggctcattttgatcaggagatagcttggcgtggtcgcgaggaggatggagctggaatgagcgcttgctatagaggaggcttgtcgtcaagaagccgaggatgctattgctccactgagggaggcaaacctggattggactgggaagctgtccgggagcgccatgccgagttggagcttcgtgctgctgccttgaagagtttggctcgctatccagatcgcgtggtggatttggaggggcaggttgggaatctgtatagggaggttgaccgtttacgggatgtggagctggaagcaggcgagagggaggcagagatggagcagcttaggaaggagttagccgagcagcgggctcgatcgagcaacttctccgaggagtgcattcacctgcgtgctgctgccgagacgcatcaggacaagctcgtcaaggctaggctagatggtgaggataaggcggtggatctctatctccggacacctcactttcaagagaaattgaacaaagccttctcggatggggtcttgcacttgattcgagatggtattgctgctggttggattgaccaggagaaaatggtatgtgacatgcagaccaagaaagaggcgagattacaagccagcgcagcgagtgatggccggagacaagctggtgagcccaaggtggagggtgctgtcagcgagcaggaggccctcgtggctatcgggggtgaggtgcaaggcgagaatgtcattaaggcgatgcgacgattggtcgtctggagtctgttggtggtgatggcgtcccctataaataggcagcctaatctcacaaggactcgccttcatcacccgcttggggattgtgcaatatgtgcccctgcgaaactgaaaacccgtccaagggccaaatggcgaggcagtataacgtcggtgctggaggcaagagcgaatgatgaggatttacgtaatgtaatctcgtttgacgcggtattgcattggccttgtccattgctgctctacatcgcgtatcttcgtaatgttaaggatgacgaggcgatatgtaatgtaatctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

464

Amino Acids

51.88

Weight (kDa)

8.78

Isoelectric Point (pI)

35.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 738
AasI GACNNNNNNGTC 1 cut(s) 764
Acc36I ACCTGC 2 cut(s) 574, 738
AccB1I GGYRCC 1 cut(s) 256
AccII CGCG 6 cut(s) 200, 223, 381, 564, 1307, 1346
AccIII TCCGGA 1 cut(s) 813
AciI CCGC 4 cut(s) 691, 797, 1172, 1307
AclWI GGATC 3 cut(s) 61, 177, 810
AcoI YGGCCR 1 cut(s) 976
AcvI CACGTG 1 cut(s) 35
AcyI GRCGYC 2 cut(s) 257, 1121
AfaI GTAC 1 cut(s) 45
AfeI AGCGCT 1 cut(s) 406
AfiI CCNNNNNNNGG 8 cut(s) 106, 270, 331, 619, 690, 1177, 1221, 1222
AflIII ACRYGT 2 cut(s) 32, 34
AgsI TTSAA 3 cut(s) 538, 830, 841
AhdI GACNNNNNGTC 1 cut(s) 1091
AjnI CCWGG 4 cut(s) 211, 230, 472, 906
AleI CACNNNNGTG 1 cut(s) 732
AluBI AGCT 9 cut(s) 84, 368, 395, 491, 520, 631, 667, 763, 989
AluI AGCT 9 cut(s) 84, 368, 395, 491, 520, 631, 667, 763, 989
Alw21I GWGCWC 1 cut(s) 42
Alw26I GTCTC 6 cut(s) 94, 146, 164, 223, 740, 976
AlwI GGATC 3 cut(s) 61, 177, 810
Ama87I CYCGRG 2 cut(s) 165, 331
Aor13HI TCCGGA 1 cut(s) 813
Aor51HI AGCGCT 1 cut(s) 406
AoxI GGCC 5 cut(s) 74, 976, 1029, 1224, 1319
AspLEI GCGC 5 cut(s) 225, 259, 407, 504, 965
AspS9I GGNCC 2 cut(s) 1030, 1224
AsuC2I CCSGG 1 cut(s) 497
AsuHPI GGTGA 8 cut(s) 16, 347, 719, 797, 1004, 1061, 1126, 1160
AvaI CYCGRG 2 cut(s) 165, 331
BaeGI GKGCMC 1 cut(s) 1198
BanI GGYRCC 1 cut(s) 256
BanII GRGCYC 2 cut(s) 697, 999
BauI CACGAG 1 cut(s) 1034
BbrPI CACGTG 1 cut(s) 35
Bbv12I GWGCWC 1 cut(s) 42
BceAI ACGGC 1 cut(s) 89
BcgI CGANNNNNNTGC 4 cut(s) 677, 711, 857, 891
BciT130I CCWGG 4 cut(s) 213, 232, 474, 908
BclI TGATCA 1 cut(s) 355
BcnI CCSGG 1 cut(s) 497
BcoDI GTCTC 6 cut(s) 94, 146, 164, 223, 740, 976
BfaI CTAG 3 cut(s) 774, 779, 1393
BfmI CTRYAG 1 cut(s) 412
BfoI RGCGCY 3 cut(s) 260, 408, 505
BfuAI ACCTGC 2 cut(s) 574, 738
BglI GCCNNNNNGGC 1 cut(s) 1037
Bme1390I CCNGG 5 cut(s) 213, 232, 474, 497, 908
BmeRI GACNNNNNGTC 1 cut(s) 1091
BmeT110I CYCGRG 2 cut(s) 165, 331
BmgT120I GGNCC 2 cut(s) 1030, 1224
BmiI GGNNCC 1 cut(s) 258
BmrFI CCNGG 5 cut(s) 213, 232, 474, 497, 908
BmrI ACTGGG 2 cut(s) 97, 493
BmsI GCATC 3 cut(s) 434, 760, 1071
BmuI ACTGGG 2 cut(s) 97, 493
BplI GAGNNNNNCTC 2 cut(s) 532, 564
BpmI CTGGAG 3 cut(s) 114, 1120, 1277
Bpu10I CCTNAGC 1 cut(s) 668
BpuMI CCSGG 1 cut(s) 497
BsaAI YACGTR 2 cut(s) 35, 1286
BsaBI GATNNNNATC 1 cut(s) 807
BsaHI GRCGYC 2 cut(s) 257, 1121
BsaI GGTCTC 2 cut(s) 146, 223
BsaJI CCNNGG 9 cut(s) 164, 212, 230, 231, 330, 439, 714, 999, 1220
BsaWI WCCGGW 2 cut(s) 144, 813
Bsc4I CCNNNNNNNGG 8 cut(s) 106, 270, 331, 619, 690, 1177, 1221, 1222
Bse1I ACTGG 2 cut(s) 103, 488
Bse3DI GCAATG 1 cut(s) 1328
Bse8I GATNNNNATC 1 cut(s) 807
BseAI TCCGGA 1 cut(s) 813
BseBI CCWGG 4 cut(s) 213, 232, 474, 908
BseDI CCNNGG 9 cut(s) 164, 212, 230, 231, 330, 439, 714, 999, 1220
BseGI GGATG 8 cut(s) 18, 54, 260, 394, 449, 628, 862, 1372
BseJI GATNNNNATC 1 cut(s) 807
BseLI CCNNNNNNNGG 8 cut(s) 106, 270, 331, 619, 690, 1177, 1221, 1222
BseMI GCAATG 1 cut(s) 1328
BseMII CTCAG 2 cut(s) 12, 450
BseNI ACTGG 2 cut(s) 103, 488
BseRI GAGGAG 4 cut(s) 319, 398, 432, 731
BseSI GKGCMC 1 cut(s) 1198
Bsh1236I CGCG 6 cut(s) 200, 223, 381, 564, 1307, 1346
Bsh1285I CGRYCG 1 cut(s) 701
BshFI GGCC 5 cut(s) 76, 978, 1031, 1226, 1321
BshNI GGYRCC 1 cut(s) 256
BsiEI CGRYCG 1 cut(s) 701
BsiHKAI GWGCWC 1 cut(s) 42
BsiHKCI CYCGRG 2 cut(s) 165, 331
BsiSI CCGG 4 cut(s) 145, 496, 814, 979
BsiWI CGTACG 1 cut(s) 43
BslFI GGGAC 2 cut(s) 83, 1108
BslI CCNNNNNNNGG 8 cut(s) 106, 270, 331, 619, 690, 1177, 1221, 1222
BsmAI GTCTC 6 cut(s) 94, 146, 164, 223, 740, 976
BsmBI CGTCTC 2 cut(s) 94, 740
BsmFI GGGAC 2 cut(s) 83, 1108
BsmI GAATGC 1 cut(s) 723
BsnI GGCC 5 cut(s) 76, 978, 1031, 1226, 1321
Bso31I GGTCTC 2 cut(s) 146, 223
BsoBI CYCGRG 2 cut(s) 165, 331
Bsp1286I GDGCHC 4 cut(s) 42, 697, 999, 1198
Bsp13I TCCGGA 1 cut(s) 813
Bsp143I GATC 7 cut(s) 53, 169, 300, 355, 559, 698, 802
Bsp68I TCGCGA 2 cut(s) 200, 381
BspACI CCGC 4 cut(s) 691, 797, 1172, 1307
BspANI GGCC 5 cut(s) 76, 978, 1031, 1226, 1321
BspCNI CTCAG 2 cut(s) 13, 451
BspEI TCCGGA 1 cut(s) 813
BspFNI CGCG 6 cut(s) 200, 223, 381, 564, 1307, 1346
BspLI GGNNCC 1 cut(s) 258
BspMI ACCTGC 2 cut(s) 574, 738
BspPI GGATC 3 cut(s) 61, 177, 810
BspT107I GGYRCC 1 cut(s) 256
BspTNI GGTCTC 2 cut(s) 146, 223
BsrDI GCAATG 1 cut(s) 1328
BsrI ACTGG 2 cut(s) 103, 488
BssECI CCNNGG 9 cut(s) 164, 212, 230, 231, 330, 439, 714, 999, 1220
BssMI GATC 7 cut(s) 53, 169, 300, 355, 559, 698, 802
BssNI GRCGYC 2 cut(s) 257, 1121
BssSI CACGAG 1 cut(s) 1034
BssT1I CCWWGG 2 cut(s) 999, 1220
Bst2BI CACGAG 1 cut(s) 1034
Bst2UI CCWGG 4 cut(s) 213, 232, 474, 908
Bst4CI ACNGT 2 cut(s) 292, 614
Bst6I CTCTTC 2 cut(s) 61, 533
BstACI GRCGYC 2 cut(s) 257, 1121
BstAPI GCANNNNNTGC 1 cut(s) 1193
BstBAI YACGTR 2 cut(s) 35, 1286
BstC8I GCNNGC 7 cut(s) 409, 550, 640, 693, 735, 961, 1022
BstDEI CTNAG 3 cut(s) 21, 459, 668
BstF5I GGATG 8 cut(s) 18, 54, 260, 394, 449, 628, 862, 1372
BstFNI CGCG 6 cut(s) 200, 223, 381, 564, 1307, 1346
BstH2I RGCGCY 3 cut(s) 260, 408, 505
BstHHI GCGC 5 cut(s) 225, 259, 407, 504, 965
BstKTI GATC 7 cut(s) 56, 172, 303, 358, 562, 701, 805
BstMAI GTCTC 6 cut(s) 94, 146, 164, 223, 740, 976
BstMBI GATC 7 cut(s) 53, 169, 300, 355, 559, 698, 802
BstMCI CGRYCG 1 cut(s) 701
BstMWI GCNNNNNNNGC 4 cut(s) 444, 965, 1037, 1193
BstNI CCWGG 4 cut(s) 213, 232, 474, 908
BstNSI RCATGY 1 cut(s) 931
BstSCI CCNGG 5 cut(s) 211, 230, 472, 495, 906
BstSFI CTRYAG 1 cut(s) 412
BstSLI GKGCMC 1 cut(s) 1198
BstSNI TACGTA 1 cut(s) 1286
BstUI CGCG 6 cut(s) 200, 223, 381, 564, 1307, 1346
BstX2I RGATCY 2 cut(s) 169, 802
BstYI RGATCY 2 cut(s) 169, 802
BsuRI GGCC 5 cut(s) 76, 978, 1031, 1226, 1321
BtgZI GCGATG 3 cut(s) 215, 1094, 1327
BtsCI GGATG 8 cut(s) 18, 54, 260, 394, 449, 628, 862, 1372
BtsIMutI CAGTG 1 cut(s) 456
BtuMI TCGCGA 2 cut(s) 200, 381
BveI ACCTGC 2 cut(s) 574, 738
Cac8I GCNNGC 7 cut(s) 409, 550, 640, 693, 735, 961, 1022
CfoI GCGC 5 cut(s) 225, 259, 407, 504, 965
Cfr13I GGNCC 2 cut(s) 1030, 1224
CseI GACGC 3 cut(s) 757, 1110, 1313
Csp6I GTAC 1 cut(s) 44
CviAII CATG 3 cut(s) 270, 506, 928
CviQI GTAC 1 cut(s) 44
DdeI CTNAG 3 cut(s) 21, 459, 668
DinI GGCGCC 1 cut(s) 258
DpnI GATC 7 cut(s) 55, 171, 302, 357, 561, 700, 804
DpnII GATC 7 cut(s) 53, 169, 300, 355, 559, 698, 802
DrdI GACNNNNNNGTC 1 cut(s) 764
DriI GACNNNNNGTC 1 cut(s) 1091
DseDI GACNNNNNNGTC 1 cut(s) 764
EaeI YGGCCR 1 cut(s) 976
Eam1104I CTCTTC 2 cut(s) 61, 533
Eam1105I GACNNNNNGTC 1 cut(s) 1091
EarI CTCTTC 2 cut(s) 61, 533
Eco105I TACGTA 1 cut(s) 1286
Eco130I CCWWGG 2 cut(s) 999, 1220
Eco24I GRGCYC 2 cut(s) 697, 999
Eco31I GGTCTC 2 cut(s) 146, 223
Eco47III AGCGCT 1 cut(s) 406
Eco72I CACGTG 1 cut(s) 35
Eco88I CYCGRG 2 cut(s) 165, 331
EcoO109I RGGNCCY 1 cut(s) 1030
EcoRII CCWGG 4 cut(s) 211, 230, 472, 906
EcoT14I CCWWGG 2 cut(s) 999, 1220
EcoT38I GRGCYC 2 cut(s) 697, 999
EgeI GGCGCC 1 cut(s) 258
EheI GGCGCC 1 cut(s) 258
ErhI CCWWGG 2 cut(s) 999, 1220
Esp3I CGTCTC 2 cut(s) 94, 740
FaeI CATG 3 cut(s) 273, 509, 931
FaqI GGGAC 2 cut(s) 83, 1108
FatI CATG 3 cut(s) 269, 505, 927
FauI CCCGC 2 cut(s) 684, 1179
FbaI TGATCA 1 cut(s) 355
FokI GGATG 8 cut(s) 25, 61, 247, 401, 456, 635, 869, 1379
FriOI GRGCYC 2 cut(s) 697, 999
FspBI CTAG 3 cut(s) 774, 779, 1393
GlaI GCGC 5 cut(s) 224, 258, 406, 503, 964
GsuI CTGGAG 3 cut(s) 114, 1120, 1277
HaeII RGCGCY 3 cut(s) 260, 408, 505
HaeIII GGCC 5 cut(s) 76, 978, 1031, 1226, 1321
HapII CCGG 4 cut(s) 145, 496, 814, 979
HgaI GACGC 3 cut(s) 757, 1110, 1313
HhaI GCGC 5 cut(s) 225, 259, 407, 504, 965
Hin1I GRCGYC 2 cut(s) 257, 1121
Hin1II CATG 3 cut(s) 273, 509, 931
Hin6I GCGC 5 cut(s) 223, 257, 405, 502, 963
HinP1I GCGC 5 cut(s) 223, 257, 405, 502, 963
HincII GTYRAC 1 cut(s) 610
HindII GTYRAC 1 cut(s) 610
HinfI GANTC 5 cut(s) 96, 592, 874, 1102, 1156
HpaII CCGG 4 cut(s) 145, 496, 814, 979
HphI GGTGA 8 cut(s) 16, 347, 719, 797, 1004, 1061, 1126, 1160
Hpy166II GTNNAC 4 cut(s) 187, 313, 610, 617
Hpy188I TCNGA 4 cut(s) 22, 30, 715, 856
Hpy8I GTNNAC 4 cut(s) 187, 313, 610, 617
Hpy99I CGWCG 2 cut(s) 1089, 1252
HpyAV CCTTC 4 cut(s) 274, 667, 859, 1172
HpyCH4III ACNGT 2 cut(s) 292, 614
HpyCH4IV ACGT 3 cut(s) 34, 1247, 1285
HpyCH4V TGCA 6 cut(s) 723, 868, 931, 1057, 1187, 1315
HpyF10VI GCNNNNNNNGC 4 cut(s) 444, 965, 1037, 1193
HpyF3I CTNAG 3 cut(s) 21, 459, 668
HpySE526I ACGT 3 cut(s) 34, 1247, 1285
Hsp92I GRCGYC 2 cut(s) 257, 1121
Hsp92II CATG 3 cut(s) 273, 509, 931
HspAI GCGC 5 cut(s) 223, 257, 405, 502, 963
KasI GGCGCC 1 cut(s) 256
Kpn2I TCCGGA 1 cut(s) 813
Ksp22I TGATCA 1 cut(s) 355
Kzo9I GATC 7 cut(s) 53, 169, 300, 355, 559, 698, 802
LmnI GCTCC 6 cut(s) 392, 458, 499, 517, 628, 661
LweI GCATC 3 cut(s) 434, 760, 1071
MaeI CTAG 3 cut(s) 774, 779, 1393
MaeII ACGT 3 cut(s) 34, 1247, 1285
MaeIII GTNAC 1 cut(s) 923
MalI GATC 7 cut(s) 55, 171, 302, 357, 561, 700, 804
MboI GATC 7 cut(s) 53, 169, 300, 355, 559, 698, 802
MboII GAAGA 3 cut(s) 78, 550, 1343
MflI RGATCY 2 cut(s) 169, 802
MhlI GDGCHC 4 cut(s) 42, 697, 999, 1198
MluCI AATT 3 cut(s) 245, 319, 836
Mly113I GGCGCC 1 cut(s) 257
MlyI GAGTC 3 cut(s) 105, 1111, 1150
MmeI TCCRAC 3 cut(s) 8, 495, 878
MroI TCCGGA 1 cut(s) 813
MseI TTAA 2 cut(s) 1074, 1362
MslI CAYNNNNRTG 1 cut(s) 732
MspA1I CMGCKG 1 cut(s) 691
MspI CCGG 4 cut(s) 145, 496, 814, 979
MspR9I CCNGG 5 cut(s) 213, 232, 474, 497, 908
Mva1269I GAATGC 1 cut(s) 723
MvaI CCWGG 4 cut(s) 213, 232, 474, 908
MvnI CGCG 6 cut(s) 200, 223, 381, 564, 1307, 1346
MwoI GCNNNNNNNGC 4 cut(s) 444, 965, 1037, 1193
NarI GGCGCC 1 cut(s) 257
NciI CCSGG 1 cut(s) 497
NdeII GATC 7 cut(s) 53, 169, 300, 355, 559, 698, 802
NlaIII CATG 3 cut(s) 273, 509, 931
NlaIV GGNNCC 1 cut(s) 258
NmeAIII GCCGAG 4 cut(s) 464, 535, 709, 769
NmuCI GTSAC 1 cut(s) 923
NruI TCGCGA 2 cut(s) 200, 381
NspI RCATGY 1 cut(s) 931
OliI CACNNNNGTG 1 cut(s) 732
PaqCI CACCTGC 1 cut(s) 738
PasI CCCWGGG 1 cut(s) 231
PctI GAATGC 1 cut(s) 723
PfeI GAWTC 2 cut(s) 592, 874
Pfl23II CGTACG 1 cut(s) 43
PfoI TCCNGGA 1 cut(s) 495
Ple19I CGATCG 1 cut(s) 701
PleI GAGTC 3 cut(s) 104, 1110, 1150
PluTI GGCGCC 1 cut(s) 260
PmaCI CACGTG 1 cut(s) 35
PmlI CACGTG 1 cut(s) 35
PpsI GAGTC 3 cut(s) 104, 1110, 1150
Ppu21I YACGTR 2 cut(s) 35, 1286
Psp6I CCWGG 4 cut(s) 211, 230, 472, 906
PspCI CACGTG 1 cut(s) 35
PspGI CCWGG 4 cut(s) 211, 230, 472, 906
PspLI CGTACG 1 cut(s) 43
PspN4I GGNNCC 1 cut(s) 258
PspPI GGNCC 2 cut(s) 1030, 1224
PsrI GAACNNNNNNTAC 2 cut(s) 305, 337
PsuI RGATCY 2 cut(s) 169, 802
PvuI CGATCG 1 cut(s) 701
RruI TCGCGA 2 cut(s) 200, 381
RsaI GTAC 1 cut(s) 45
RsaNI GTAC 1 cut(s) 44
RseI CAYNNNNRTG 1 cut(s) 732
SaqAI TTAA 2 cut(s) 1074, 1362
Sau3AI GATC 7 cut(s) 53, 169, 300, 355, 559, 698, 802
Sau96I GGNCC 2 cut(s) 1030, 1224
SchI GAGTC 3 cut(s) 105, 1111, 1150
ScrFI CCNGG 5 cut(s) 213, 232, 474, 497, 908
SduI GDGCHC 4 cut(s) 42, 697, 999, 1198
SfaNI GCATC 3 cut(s) 434, 760, 1071
SfcI CTRYAG 1 cut(s) 412
SfoI GGCGCC 1 cut(s) 258
SmiMI CAYNNNNRTG 1 cut(s) 732
SnaBI TACGTA 1 cut(s) 1286
Sse9I AATT 3 cut(s) 245, 319, 836
SsiI CCGC 4 cut(s) 691, 797, 1172, 1307
SspDI GGCGCC 1 cut(s) 256
SspMI CTAG 3 cut(s) 774, 779, 1393
StyD4I CCNGG 5 cut(s) 211, 230, 472, 495, 906
StyI CCWWGG 2 cut(s) 999, 1220
TaaI ACNGT 2 cut(s) 292, 614
TaiI ACGT 3 cut(s) 37, 1250, 1288
TaqI TCGA 5 cut(s) 61, 119, 697, 701, 877
TasI AATT 3 cut(s) 245, 319, 836
TfiI GAWTC 2 cut(s) 592, 874
Tru1I TTAA 2 cut(s) 1074, 1362
Tru9I TTAA 2 cut(s) 1074, 1362
TscAI CASTG 1 cut(s) 463
TseFI GTSAC 1 cut(s) 923
Tsp45I GTSAC 1 cut(s) 923
TspDTI ATGAA 1 cut(s) 1154
TspGWI ACGGA 1 cut(s) 61
TspRI CASTG 1 cut(s) 463
XceI RCATGY 1 cut(s) 931
XcmI CCANNNNNNNNNTGG 2 cut(s) 267, 1227
XspI CTAG 3 cut(s) 774, 779, 1393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.