Rroxscaffold_2G00108940

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000075
Physical Location & Seq
Reverse (-)
33019497 .. 33020938
1442 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00108940.1

Sequence Viewer

Length: 705 bp
ATGGCACGGGAGCATCGTGGTCGCCGTAGGCGAGAGGGTTCCTCTTGTAGAGGTGGTGAAGGAGTTTCTCATGGTGGTGTCGGCGCTTCTCGTGGAGGTGATAAGGCGCTTCTCGCGGACGTGACGAGGGTGCTCCTCGGGGGTGCCATTGGCACTACCGAGGAGGTGGCGAGGGTTCGTCTTATGGGGTCGCGAGTAGGGTTGAGCATATCGCGAGCCCCGAGGCTTTCGAGGTCGAGAATGTCGAGGTGTTGGAGATTCCTCACTCGCCGGGTAGGCGGCTACTCCTCGAGCGAAGCGTGTGACGAAGGTTTTGGGTGCATTCCCCAAGGGAAAGAGGAGGTTCTATCTCCGTGTAGGCTTCCGATATATGAGAGGTTTGAACTCGGGAGGCGTCGGCAAGAGCGATGCTCCATATGCTTTGAGGTGGATACCGATGTTATTATTAGGGAGCTGTTGCGAGAATTGGAGACGACAAGGCGGTGTGACATTGAGCTTCCCGATAAGGAGGTACATGTTACCGATCATCGAGTGAATATCTTGTTGCCCGATGAGATGTACCTTAGGTTTCCAAATACCGTGCTAGAGTATCTTAACCACCAAGCCGAGGAGGAGGACGTGCGAAGGCCATATAGCTCGGGGCCATCAAGAGAGAGGTGCGAGATGGGGACTCATTCTCGGGACCAAGGGTGCAAGGCGAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

234

Amino Acids

26.48

Weight (kDa)

8.74

Isoelectric Point (pI)

67.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 143
AccII CGCG 3 cut(s) 116, 193, 214
AciI CCGC 3 cut(s) 116, 279, 481
AcyI GRCGYC 1 cut(s) 394
AfaI GTAC 2 cut(s) 513, 560
AfiI CCNNNNNNNGG 1 cut(s) 607
AflIII ACRYGT 1 cut(s) 514
AgsI TTSAA 1 cut(s) 383
AjiI CACGTC 2 cut(s) 121, 619
AluBI AGCT 3 cut(s) 454, 496, 636
AluI AGCT 3 cut(s) 454, 496, 636
Alw21I GWGCWC 1 cut(s) 135
Alw26I GTCTC 1 cut(s) 464
Ama87I CYCGRG 6 cut(s) 137, 220, 289, 386, 637, 678
AoxI GGCC 2 cut(s) 626, 641
ArsI GACNNNNNNTTYG 2 cut(s) 296, 328
AspLEI GCGC 2 cut(s) 86, 109
AspS9I GGNCC 2 cut(s) 641, 682
AsuC2I CCSGG 1 cut(s) 272
AsuHPI GGTGA 2 cut(s) 68, 110
AvaI CYCGRG 6 cut(s) 137, 220, 289, 386, 637, 678
AvaII GGWCC 1 cut(s) 682
AxyI CCTNAGG 1 cut(s) 563
BaeI ACNNNNGTAYC 2 cut(s) 423, 456
BanI GGYRCC 1 cut(s) 143
BanII GRGCYC 1 cut(s) 220
BauI CACGAG 1 cut(s) 90
Bbv12I GWGCWC 1 cut(s) 135
BccI CCATC 2 cut(s) 652, 658
BceAI ACGGC 1 cut(s) 9
BcgI CGANNNNNNTGC 1 cut(s) 36
BciVI GTATCC 1 cut(s) 424
BcnI CCSGG 1 cut(s) 272
BcoDI GTCTC 1 cut(s) 464
BfaI CTAG 1 cut(s) 584
BfoI RGCGCY 2 cut(s) 87, 110
BfuI GTATCC 1 cut(s) 424
BglI GCCNNNNNGGC 1 cut(s) 276
BisI GCNGC 1 cut(s) 280
BlsI GCNGC 1 cut(s) 281
Bme1390I CCNGG 1 cut(s) 272
Bme18I GGWCC 1 cut(s) 682
BmeT110I CYCGRG 6 cut(s) 137, 220, 289, 386, 637, 678
BmgBI CACGTC 2 cut(s) 121, 619
BmgT120I GGNCC 2 cut(s) 641, 682
BmiI GGNNCC 4 cut(s) 40, 145, 642, 683
BmrFI CCNGG 1 cut(s) 272
BmsI GCATC 2 cut(s) 22, 398
BplI GAGNNNNNCTC 4 cut(s) 26, 58, 395, 427
BpuMI CCSGG 1 cut(s) 272
BsaHI GRCGYC 1 cut(s) 394
BsaJI CCNNGG 6 cut(s) 136, 159, 221, 328, 606, 685
Bsc4I CCNNNNNNNGG 1 cut(s) 607
Bse21I CCTNAGG 1 cut(s) 563
BseDI CCNNGG 6 cut(s) 136, 159, 221, 328, 606, 685
BseLI CCNNNNNNNGG 1 cut(s) 607
BseRI GAGGAG 6 cut(s) 125, 176, 277, 353, 623, 626
Bsh1236I CGCG 3 cut(s) 116, 193, 214
BshFI GGCC 2 cut(s) 628, 643
BshNI GGYRCC 1 cut(s) 143
BsiHKAI GWGCWC 1 cut(s) 135
BsiHKCI CYCGRG 6 cut(s) 137, 220, 289, 386, 637, 678
BsiSI CCGG 1 cut(s) 271
BslFI GGGAC 2 cut(s) 682, 695
BslI CCNNNNNNNGG 1 cut(s) 607
BsmAI GTCTC 1 cut(s) 464
BsmBI CGTCTC 1 cut(s) 464
BsmFI GGGAC 2 cut(s) 682, 695
BsmI GAATGC 1 cut(s) 321
BsnI GGCC 2 cut(s) 628, 643
BsoBI CYCGRG 6 cut(s) 137, 220, 289, 386, 637, 678
Bsp1286I GDGCHC 2 cut(s) 135, 220
Bsp143I GATC 1 cut(s) 523
Bsp68I TCGCGA 2 cut(s) 193, 214
BspACI CCGC 3 cut(s) 116, 279, 481
BspANI GGCC 2 cut(s) 628, 643
BspFNI CGCG 3 cut(s) 116, 193, 214
BspLI GGNNCC 4 cut(s) 40, 145, 642, 683
BspT107I GGYRCC 1 cut(s) 143
BssECI CCNNGG 6 cut(s) 136, 159, 221, 328, 606, 685
BssMI GATC 1 cut(s) 523
BssNI GRCGYC 1 cut(s) 394
BssSI CACGAG 1 cut(s) 90
BssT1I CCWWGG 2 cut(s) 328, 685
Bst2BI CACGAG 1 cut(s) 90
Bst4CI ACNGT 1 cut(s) 580
BstACI GRCGYC 1 cut(s) 394
BstC8I GCNNGC 1 cut(s) 216
BstDEI CTNAG 1 cut(s) 563
BstFNI CGCG 3 cut(s) 116, 193, 214
BstH2I RGCGCY 2 cut(s) 87, 110
BstHHI GCGC 2 cut(s) 86, 109
BstKTI GATC 1 cut(s) 526
BstMAI GTCTC 1 cut(s) 464
BstMBI GATC 1 cut(s) 523
BstMWI GCNNNNNNNGC 3 cut(s) 113, 276, 417
BstNSI RCATGY 1 cut(s) 518
BstSCI CCNGG 1 cut(s) 270
BstUI CGCG 3 cut(s) 116, 193, 214
Bsu36I CCTNAGG 1 cut(s) 563
BsuI GTATCC 1 cut(s) 424
BsuRI GGCC 2 cut(s) 628, 643
BtgZI GCGATG 1 cut(s) 421
BtrI CACGTC 2 cut(s) 121, 619
BtuMI TCGCGA 2 cut(s) 193, 214
Cac8I GCNNGC 1 cut(s) 216
CfoI GCGC 2 cut(s) 86, 109
Cfr13I GGNCC 2 cut(s) 641, 682
CseI GACGC 1 cut(s) 383
Csp6I GTAC 2 cut(s) 512, 559
CviAII CATG 2 cut(s) 71, 515
CviQI GTAC 2 cut(s) 512, 559
DdeI CTNAG 1 cut(s) 563
DpnI GATC 1 cut(s) 525
DpnII GATC 1 cut(s) 523
Eco130I CCWWGG 2 cut(s) 328, 685
Eco24I GRGCYC 1 cut(s) 220
Eco47I GGWCC 1 cut(s) 682
Eco81I CCTNAGG 1 cut(s) 563
Eco88I CYCGRG 6 cut(s) 137, 220, 289, 386, 637, 678
EcoT14I CCWWGG 2 cut(s) 328, 685
EcoT38I GRGCYC 1 cut(s) 220
ErhI CCWWGG 2 cut(s) 328, 685
Esp3I CGTCTC 1 cut(s) 464
FaeI CATG 2 cut(s) 74, 518
FaqI GGGAC 2 cut(s) 682, 695
FatI CATG 2 cut(s) 70, 514
FauNDI CATATG 1 cut(s) 416
Fnu4HI GCNGC 1 cut(s) 280
FriOI GRGCYC 1 cut(s) 220
Fsp4HI GCNGC 1 cut(s) 280
FspBI CTAG 1 cut(s) 584
GlaI GCGC 2 cut(s) 85, 108
GluI GCNGC 1 cut(s) 280
HaeII RGCGCY 2 cut(s) 87, 110
HaeIII GGCC 2 cut(s) 628, 643
HapII CCGG 1 cut(s) 271
HgaI GACGC 1 cut(s) 383
HhaI GCGC 2 cut(s) 86, 109
Hin1I GRCGYC 1 cut(s) 394
Hin1II CATG 2 cut(s) 74, 518
Hin6I GCGC 2 cut(s) 84, 107
HinP1I GCGC 2 cut(s) 84, 107
HinfI GANTC 2 cut(s) 258, 670
HpaII CCGG 1 cut(s) 271
HphI GGTGA 2 cut(s) 68, 110
Hpy188I TCNGA 1 cut(s) 366
Hpy188III TCNNGA 7 cut(s) 192, 213, 237, 388, 500, 648, 680
Hpy99I CGWCG 1 cut(s) 399
HpyAV CCTTC 3 cut(s) 53, 302, 618
HpyCH4III ACNGT 1 cut(s) 580
HpyCH4IV ACGT 2 cut(s) 120, 618
HpyCH4V TGCA 2 cut(s) 321, 693
HpyF10VI GCNNNNNNNGC 3 cut(s) 113, 276, 417
HpyF3I CTNAG 1 cut(s) 563
HpySE526I ACGT 2 cut(s) 120, 618
Hsp92I GRCGYC 1 cut(s) 394
Hsp92II CATG 2 cut(s) 74, 518
HspAI GCGC 2 cut(s) 84, 107
Kzo9I GATC 1 cut(s) 523
LmnI GCTCC 4 cut(s) 10, 138, 416, 451
LpnPI CCDG 1 cut(s) 284
LweI GCATC 2 cut(s) 22, 398
MaeI CTAG 1 cut(s) 584
MaeII ACGT 2 cut(s) 120, 618
MaeIII GTNAC 4 cut(s) 121, 302, 485, 517
MalI GATC 1 cut(s) 525
MboI GATC 1 cut(s) 523
MhlI GDGCHC 2 cut(s) 135, 220
MluCI AATT 1 cut(s) 464
MlyI GAGTC 1 cut(s) 664
MmeI TCCRAC 1 cut(s) 233
MseI TTAA 1 cut(s) 594
MslI CAYNNNNRTG 1 cut(s) 75
MspI CCGG 1 cut(s) 271
MspR9I CCNGG 1 cut(s) 272
Mva1269I GAATGC 1 cut(s) 321
MvnI CGCG 3 cut(s) 116, 193, 214
MwoI GCNNNNNNNGC 3 cut(s) 113, 276, 417
NciI CCSGG 1 cut(s) 272
NdeI CATATG 1 cut(s) 416
NdeII GATC 1 cut(s) 523
NlaIII CATG 2 cut(s) 74, 518
NlaIV GGNNCC 4 cut(s) 40, 145, 642, 683
NmeAIII GCCGAG 1 cut(s) 631
NmuCI GTSAC 3 cut(s) 121, 302, 485
NruI TCGCGA 2 cut(s) 193, 214
NspI RCATGY 1 cut(s) 518
PaeR7I CTCGAG 1 cut(s) 289
PciI ACATGT 1 cut(s) 514
PcsI WCGNNNNNNNCGW 7 cut(s) 13, 22, 28, 218, 242, 296, 403
PctI GAATGC 1 cut(s) 321
PfeI GAWTC 1 cut(s) 258
PkrI GCNGC 1 cut(s) 281
PleI GAGTC 1 cut(s) 664
PpsI GAGTC 1 cut(s) 664
PscI ACATGT 1 cut(s) 514
PspN4I GGNNCC 4 cut(s) 40, 145, 642, 683
PspPI GGNCC 2 cut(s) 641, 682
PspXI VCTCGAGB 1 cut(s) 289
RruI TCGCGA 2 cut(s) 193, 214
RsaI GTAC 2 cut(s) 513, 560
RsaNI GTAC 2 cut(s) 512, 559
RseI CAYNNNNRTG 1 cut(s) 75
SaqAI TTAA 1 cut(s) 594
SatI GCNGC 1 cut(s) 280
Sau3AI GATC 1 cut(s) 523
Sau96I GGNCC 2 cut(s) 641, 682
SchI GAGTC 1 cut(s) 664
ScrFI CCNGG 1 cut(s) 272
SduI GDGCHC 2 cut(s) 135, 220
SfaNI GCATC 2 cut(s) 22, 398
Sfr274I CTCGAG 1 cut(s) 289
SinI GGWCC 1 cut(s) 682
SlaI CTCGAG 1 cut(s) 289
SmiMI CAYNNNNRTG 1 cut(s) 75
SmlI CTYRAG 1 cut(s) 289
SmoI CTYRAG 1 cut(s) 289
Sse9I AATT 1 cut(s) 464
SsiI CCGC 3 cut(s) 116, 279, 481
SspMI CTAG 1 cut(s) 584
StyD4I CCNGG 1 cut(s) 270
StyI CCWWGG 2 cut(s) 328, 685
TaaI ACNGT 1 cut(s) 580
TaiI ACGT 2 cut(s) 123, 621
TaqI TCGA 5 cut(s) 230, 236, 245, 290, 529
TasI AATT 1 cut(s) 464
TauI GCSGC 1 cut(s) 282
TfiI GAWTC 1 cut(s) 258
Tru1I TTAA 1 cut(s) 594
Tru9I TTAA 1 cut(s) 594
TseFI GTSAC 3 cut(s) 121, 302, 485
Tsp45I GTSAC 3 cut(s) 121, 302, 485
TspGWI ACGGA 1 cut(s) 342
VpaK11BI GGWCC 1 cut(s) 682
XceI RCATGY 1 cut(s) 518
XhoI CTCGAG 1 cut(s) 289
XspI CTAG 1 cut(s) 584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.