Rmu_sc0002087.1_g000006

Belongs to the AAA ATPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002087.1
OG0006921
Physical Location & Seq
Forward (+)
29886 .. 35169
5284 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2535 bp
atgcagtacttaatccaacccattatgagacttcttcatccaatcacccatgcattctccaaaagccgatcatcagctgatgaactcatgatcatgcaaattgaagaataccatggcatgagcactcataataaagtgttcgaagcttcagagctttacttgcacaacaagatgagcccttccactagactcctcaaaattgtacaaactcagaaagagactaagtttgccatccatttctcaaacaaccaagagtttgaagacatttatgaaggagtccagctgaaatggaaatacaattccaaatccaagaagtccaattatcctagcaaagcagggaaaaagcagcaattctttgagctcagatttgatgtcaaacacaaggaaaaggtcatggatgcttacttgccttatgttgtagagacattcaaggctatgaaagatgcaggaaagattgtcaagctgcatacacttgtaaggtcagaggattacaaagtaagatggagtgcaatcaatttcgaacaccctgcaacattcgagaccatagccatggattctgagcagaagagatcggttttggaggatttggacaggtttgttaagaggaaagagttctatcaaagagtaggaagggcttggaaaagggggtatctactttatggtcctccagggactggtaaatcatcccttataggtgctattgctaattatctgaagtttgatatttatgacttgcaactcacgcatttgatgtcggatatggaattaagaagagtgttgctggcaacaacaaataaatccatacttgtgattgaggatatagattgtagtcaattgaagctgcaagatagaaagaacagcaataagaaaaatgactcagaaagcaatcagctttcgctattgggacgactactgaacttcacagatggcctgtggtatagttgtggagaagagagaatcattatattcactaccagtcacaagagcaaactagaccctgcattgctgcgttcaggaagaatggacatgcacgtccacatgtcgtattgctcatatgagggcttcaaaacattggcctcaaattacctaggcatcaaggaacaccaacctttgtttgatgagattgaaagcctactgcagaagacagaggtcactcctgcacaagtggccgaggagctgatgaagagtgagattgctgatgttgcactccaagctttgatcacagggataaaggaaatgaataaaagggaggaagatgaaaaaaaggccaaagatgaagagaaagttaagaacgataaagagaaggttgatcataaacacagcaatatactagtgcaaggattgaccatcatagctccggtgaggtctccgaacacagatggaattaatccggattcatgcacaaacgtcaagattgaggactgttacattgtctccggcgacgactgcgtggccgtcaagagcggttgggaccagtacggcgtgtcgttgggtatgccaaccaagcaactagtgatcagacgacttacttgtgtttcgccttacagcgccgccattgcattgggcagcgagatgtccggcgggattgaagacgtcagagcagaagacatcgtggccattgatacggaatccggggtgaggatcaagacagctgtagggcgaggagggtacgtgagggacgtgtacttaaggagaatggaaatgcacaccatgaagtgggcgtttaggatgagtggcgattatgggtcacacgctgacgatggctatgacaagaaggcgtttcctgagatcaaagggattcactacagggatgtggtggctgataatgtgacgatggcggcgaaactggaggggattgctggccatccgtttacggggatttgcatgtcgaatgtgacagttggattggttgccaaggcaaagaagcagccgtggagctgtgctgatattgagggggttgcaagcggcgtgacgccgacaccgtgtgatttgctacacggcgatgatccgagtcagggtgatgttgctagtggtggctgtgattttcctgtggatgttgtaccaattgacatggtggagatgaaaagatgtaggtatgatagtaggatgaagtcgcctctttcatctcctagtcgttctaggagtccaagttcgtctgatcaggaccctgcggacaaggatccagctccgagtccatcatcattaggagggcacgagcttgagcactactattcgacaccgccaaaaccagctgatgatgatgatgataacgtgacgtcagaatcaccatcaacaagtttcgctgggcctgatgcaccttatgacattcatggtggacgatcatcatcaaaaggaaagcccaaaaaatggaagccgaagcggtcaccaccacctcctccttctcctgctgctcctgcgccattgcctcctaagaataatgcaagcgccgctgctgagatgggtactgttggggctcggtttggcttcggttttggttgcgttcttctggccatcatgaacaatcacatgtattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA AAA_assoc

Protein Analysis

844

Amino Acids

94.21

Weight (kDa)

6.95

Isoelectric Point (pI)

58.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 15 - 99 7.7e-15 Domain associated at C-terminal with AAA
AAA PF00004 217 - 348 3.1e-18 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 350 - 421 5.7e-24 At3g28540-like, AAA+ ATPase lid domain
Glyco_hydro_28 PF00295 440 - 651 2.4e-23 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1031
AatII GACGTC 2 cut(s) 1596, 2279
AccB7I CCANNNNNTGG 3 cut(s) 674, 1716, 2367
AccBSI CCGCTC 1 cut(s) 1464
AccIII TCCGGA 1 cut(s) 1390
AciI CCGC 9 cut(s) 1464, 1551, 1581, 1838, 1965, 2171, 2240, 2380, 2448
AclWI GGATC 4 cut(s) 1649, 2000, 2174, 2187
AcoI YGGCCR 5 cut(s) 1167, 1452, 1614, 1861, 2508
AcuI CTGAAG 2 cut(s) 132, 734
AcyI GRCGYC 3 cut(s) 1593, 1973, 2276
AdeI CACNNNGTG 1 cut(s) 1985
AfaI GTAC 7 cut(s) 8, 204, 1478, 1670, 1685, 2061, 2464
AfiI CCNNNNNNNGG 6 cut(s) 674, 1638, 1716, 1874, 2015, 2367
AflII CTTAAG 1 cut(s) 1687
AflIII ACRYGT 3 cut(s) 1038, 1680, 2526
AgsI TTSAA 7 cut(s) 104, 260, 430, 838, 1066, 1127, 1589
AhlI ACTAGT 2 cut(s) 1330, 1510
AjiI CACGTC 2 cut(s) 1033, 1681
AjnI CCWGG 1 cut(s) 667
AloI GAACNNNNNNTCC 2 cut(s) 2134, 2166
Alw21I GWGCWC 3 cut(s) 125, 363, 2226
Alw26I GTCTC 6 cut(s) 22, 212, 416, 533, 1371, 1438
AlwI GGATC 4 cut(s) 1649, 2000, 2174, 2187
AlwNI CAGNNNCTG 1 cut(s) 674
Aor13HI TCCGGA 1 cut(s) 1390
AoxI GGCC 9 cut(s) 928, 1074, 1167, 1266, 1452, 1614, 1861, 2306, 2508
ApeKI GCWGC 8 cut(s) 346, 463, 841, 1006, 1566, 1927, 2408, 2450
AseI ATTAAT 1 cut(s) 1386
Asp700I GAANNNNTTC 1 cut(s) 611
AspA2I CCTAGG 1 cut(s) 1087
AspLEI GCGC 3 cut(s) 1550, 2419, 2447
AspS9I GGNCC 4 cut(s) 662, 1471, 2164, 2306
AsuC2I CCSGG 1 cut(s) 1633
AsuHPI GGTGA 6 cut(s) 37, 1372, 1648, 2030, 2277, 2376
AsuII TTCGAA 2 cut(s) 141, 519
AvaII GGWCC 3 cut(s) 662, 1471, 2164
AvrII CCTAGG 1 cut(s) 1087
BaeGI GKGCMC 1 cut(s) 2214
BalI TGGCCA 3 cut(s) 1616, 1863, 2510
BamHI GGATCC 1 cut(s) 2179
BanII GRGCYC 3 cut(s) 179, 363, 2476
BauI CACGAG 1 cut(s) 2213
BbsI GAAGAC 4 cut(s) 267, 1148, 1596, 1611
Bbv12I GWGCWC 3 cut(s) 125, 363, 2226
BbvI GCAGC 8 cut(s) 358, 450, 828, 993, 1578, 1939, 2395, 2437
BceAI ACGGC 4 cut(s) 1439, 1495, 1915, 2014
BcgI CGANNNNNNTGC 2 cut(s) 509, 543
BciT130I CCWGG 1 cut(s) 669
BclI TGATCA 5 cut(s) 90, 1218, 1309, 1515, 2158
BcnI CCSGG 1 cut(s) 1633
BcoDI GTCTC 6 cut(s) 22, 212, 416, 533, 1371, 1438
BcuI ACTAGT 2 cut(s) 1330, 1510
BfaI CTAG 9 cut(s) 186, 327, 992, 1088, 1331, 1511, 2028, 2130, 2139
BfmI CTRYAG 3 cut(s) 1136, 1653, 1804
BfoI RGCGCY 2 cut(s) 1551, 2448
BfrI CTTAAG 1 cut(s) 1687
BlnI CCTAGG 1 cut(s) 1087
BmcAI AGTACT 1 cut(s) 8
Bme1390I CCNGG 2 cut(s) 669, 1633
Bme18I GGWCC 3 cut(s) 662, 1471, 2164
BmgBI CACGTC 2 cut(s) 1033, 1681
BmgT120I GGNCC 4 cut(s) 662, 1471, 2164, 2306
BmiI GGNNCC 3 cut(s) 1472, 2166, 2181
BmrFI CCNGG 2 cut(s) 669, 1633
BmsI GCATC 4 cut(s) 388, 433, 1101, 2302
BoxI GACNNNNGTC 1 cut(s) 1148
BpiI GAAGAC 4 cut(s) 267, 1148, 1596, 1611
BpmI CTGGAG 2 cut(s) 651, 1868
Bpu14I TTCGAA 2 cut(s) 141, 519
BpuEI CTTGAG 1 cut(s) 2240
BpuMI CCSGG 1 cut(s) 1633
BsaAI YACGTR 1 cut(s) 1672
BsaBI GATNNNNATC 1 cut(s) 2344
BsaHI GRCGYC 3 cut(s) 1593, 1973, 2276
BsaI GGTCTC 2 cut(s) 533, 1371
BsaJI CCNNGG 8 cut(s) 112, 549, 668, 1087, 1170, 1632, 1914, 1931
BsaWI WCCGGW 2 cut(s) 1357, 1390
BsaXI ACNNNNNCTCC 6 cut(s) 1418, 1448, 1656, 1686, 2134, 2164
Bsc4I CCNNNNNNNGG 6 cut(s) 674, 1638, 1716, 1874, 2015, 2367
Bse1I ACTGG 4 cut(s) 679, 975, 1474, 1851
Bse3DI GCAATG 3 cut(s) 1001, 1554, 2420
Bse8I GATNNNNATC 1 cut(s) 2344
BseAI TCCGGA 1 cut(s) 1390
BseBI CCWGG 1 cut(s) 669
BseDI CCNNGG 8 cut(s) 112, 549, 668, 1087, 1170, 1632, 1914, 1931
BseGI GGATG 9 cut(s) 37, 231, 403, 683, 1734, 1816, 1864, 2059, 2112
BseJI GATNNNNATC 1 cut(s) 2344
BseLI CCNNNNNNNGG 6 cut(s) 674, 1638, 1716, 1874, 2015, 2367
BseMI GCAATG 3 cut(s) 1001, 1554, 2420
BseMII CTCAG 6 cut(s) 224, 376, 549, 891, 1776, 2445
BseNI ACTGG 4 cut(s) 679, 975, 1474, 1851
BseRI GAGGAG 4 cut(s) 182, 1187, 1677, 2385
BseSI GKGCMC 1 cut(s) 2214
BseXI GCAGC 8 cut(s) 358, 450, 828, 993, 1578, 1939, 2395, 2437
BseYI CCCAGC 1 cut(s) 2303
BsgI GTGCAG 1 cut(s) 1143
BshFI GGCC 9 cut(s) 930, 1076, 1169, 1268, 1454, 1616, 1863, 2308, 2510
BsiHKAI GWGCWC 3 cut(s) 125, 363, 2226
BsiSI CCGG 5 cut(s) 1358, 1391, 1437, 1578, 1632
BslFI GGGAC 4 cut(s) 685, 918, 1484, 1691
BslI CCNNNNNNNGG 6 cut(s) 674, 1638, 1716, 1874, 2015, 2367
BsmAI GTCTC 6 cut(s) 22, 212, 416, 533, 1371, 1438
BsmFI GGGAC 4 cut(s) 685, 918, 1484, 1691
BsmI GAATGC 1 cut(s) 53
BsnI GGCC 9 cut(s) 930, 1076, 1169, 1268, 1454, 1616, 1863, 2308, 2510
Bso31I GGTCTC 2 cut(s) 533, 1371
Bsp119I TTCGAA 2 cut(s) 141, 519
Bsp1286I GDGCHC 6 cut(s) 125, 179, 363, 2214, 2226, 2476
Bsp13I TCCGGA 1 cut(s) 1390
Bsp1407I TGTACA 1 cut(s) 202
Bsp19I CCATGG 2 cut(s) 112, 549
BspACI CCGC 9 cut(s) 1464, 1551, 1581, 1838, 1965, 2171, 2240, 2380, 2448
BspANI GGCC 9 cut(s) 930, 1076, 1169, 1268, 1454, 1616, 1863, 2308, 2510
BspCNI CTCAG 6 cut(s) 223, 375, 550, 890, 1777, 2446
BspEI TCCGGA 1 cut(s) 1390
BspHI TCATGA 2 cut(s) 87, 2514
BspLI GGNNCC 3 cut(s) 1472, 2166, 2181
BspMAI CTGCAG 1 cut(s) 1140
BspPI GGATC 4 cut(s) 1649, 2000, 2174, 2187
BspT104I TTCGAA 2 cut(s) 141, 519
BspTI CTTAAG 1 cut(s) 1687
BspTNI GGTCTC 2 cut(s) 533, 1371
BsrBI CCGCTC 1 cut(s) 1464
BsrDI GCAATG 3 cut(s) 1001, 1554, 2420
BsrGI TGTACA 1 cut(s) 202
BsrI ACTGG 4 cut(s) 679, 975, 1474, 1851
BssECI CCNNGG 8 cut(s) 112, 549, 668, 1087, 1170, 1632, 1914, 1931
BssNI GRCGYC 3 cut(s) 1593, 1973, 2276
BssSI CACGAG 1 cut(s) 2213
BssT1I CCWWGG 4 cut(s) 112, 549, 1087, 1914
Bst2BI CACGAG 1 cut(s) 2213
Bst2UI CCWGG 1 cut(s) 669
Bst4CI ACNGT 4 cut(s) 1424, 1900, 1983, 2467
Bst6I CTCTTC 5 cut(s) 560, 766, 945, 1178, 1272
BstACI GRCGYC 3 cut(s) 1593, 1973, 2276
BstAFI CTTAAG 1 cut(s) 1687
BstAUI TGTACA 1 cut(s) 202
BstBAI YACGTR 1 cut(s) 1672
BstBI TTCGAA 2 cut(s) 141, 519
BstC8I GCNNGC 4 cut(s) 783, 1861, 1963, 2443
BstDEI CTNAG 8 cut(s) 210, 222, 362, 558, 877, 1785, 2430, 2454
BstDSI CCRYGG 3 cut(s) 112, 549, 1931
BstEII GGTNACC 1 cut(s) 2382
BstF5I GGATG 9 cut(s) 37, 231, 403, 683, 1734, 1816, 1864, 2059, 2112
BstH2I RGCGCY 2 cut(s) 1551, 2448
BstHHI GCGC 3 cut(s) 1550, 2419, 2447
BstMAI GTCTC 6 cut(s) 22, 212, 416, 533, 1371, 1438
BstNI CCWGG 1 cut(s) 669
BstNSI RCATGY 4 cut(s) 1030, 1042, 1888, 2530
BstPAI GACNNNNGTC 1 cut(s) 1148
BstPI GGTNACC 1 cut(s) 2382
BstSCI CCNGG 2 cut(s) 667, 1631
BstSFI CTRYAG 3 cut(s) 1136, 1653, 1804
BstSLI GKGCMC 1 cut(s) 2214
BstV1I GCAGC 8 cut(s) 358, 450, 828, 993, 1578, 1939, 2395, 2437
BstV2I GAAGAC 4 cut(s) 267, 1148, 1596, 1611
BstX2I RGATCY 1 cut(s) 2179
BstXI CCANNNNNNTGG 2 cut(s) 550, 1561
BstYI RGATCY 1 cut(s) 2179
BsuRI GGCC 9 cut(s) 930, 1076, 1169, 1268, 1454, 1616, 1863, 2308, 2510
BtgI CCRYGG 3 cut(s) 112, 549, 1931
BtgZI GCGATG 1 cut(s) 2016
BtrI CACGTC 2 cut(s) 1033, 1681
BtsCI GGATG 9 cut(s) 37, 231, 403, 683, 1734, 1816, 1864, 2059, 2112
Cac8I GCNNGC 4 cut(s) 783, 1861, 1963, 2443
CaiI CAGNNNCTG 1 cut(s) 674
CciI TCATGA 2 cut(s) 87, 2514
CfoI GCGC 3 cut(s) 1550, 2419, 2447
Cfr13I GGNCC 4 cut(s) 662, 1471, 2164, 2306
CseI GACGC 1 cut(s) 1981
Csp6I GTAC 7 cut(s) 7, 203, 1477, 1669, 1684, 2060, 2463
CviQI GTAC 7 cut(s) 7, 203, 1477, 1669, 1684, 2060, 2463
DdeI CTNAG 8 cut(s) 210, 222, 362, 558, 877, 1785, 2430, 2454
DraIII CACNNNGTG 1 cut(s) 1985
DrdI GACNNNNNNGTC 1 cut(s) 1031
DseDI GACNNNNNNGTC 1 cut(s) 1031
EaeI YGGCCR 5 cut(s) 1167, 1452, 1614, 1861, 2508
Eam1104I CTCTTC 5 cut(s) 560, 766, 945, 1178, 1272
EarI CTCTTC 5 cut(s) 560, 766, 945, 1178, 1272
Ecl136II GAGCTC 1 cut(s) 361
Eco130I CCWWGG 4 cut(s) 112, 549, 1087, 1914
Eco24I GRGCYC 3 cut(s) 179, 363, 2476
Eco31I GGTCTC 2 cut(s) 533, 1371
Eco47I GGWCC 3 cut(s) 662, 1471, 2164
Eco53kI GAGCTC 1 cut(s) 361
Eco57I CTGAAG 2 cut(s) 132, 734
Eco91I GGTNACC 1 cut(s) 2382
EcoICRI GAGCTC 1 cut(s) 361
EcoO109I RGGNCCY 1 cut(s) 2164
EcoO65I GGTNACC 1 cut(s) 2382
EcoRII CCWGG 1 cut(s) 667
EcoT14I CCWWGG 4 cut(s) 112, 549, 1087, 1914
EcoT22I ATGCAT 1 cut(s) 55
EcoT38I GRGCYC 3 cut(s) 179, 363, 2476
ErhI CCWWGG 4 cut(s) 112, 549, 1087, 1914
FaqI GGGAC 4 cut(s) 685, 918, 1484, 1691
FauI CCCGC 1 cut(s) 1574
FauNDI CATATG 1 cut(s) 1054
FbaI TGATCA 5 cut(s) 90, 1218, 1309, 1515, 2158
FokI GGATG 9 cut(s) 24, 218, 410, 670, 1741, 1823, 1851, 2066, 2119
FriOI GRGCYC 3 cut(s) 179, 363, 2476
FspBI CTAG 9 cut(s) 186, 327, 992, 1088, 1331, 1511, 2028, 2130, 2139
GlaI GCGC 3 cut(s) 1549, 2418, 2446
GsaI CCCAGC 1 cut(s) 2307
GsuI CTGGAG 2 cut(s) 651, 1868
HaeII RGCGCY 2 cut(s) 1551, 2448
HaeIII GGCC 9 cut(s) 930, 1076, 1169, 1268, 1454, 1616, 1863, 2308, 2510
HapII CCGG 5 cut(s) 1358, 1391, 1437, 1578, 1632
HgaI GACGC 1 cut(s) 1981
HhaI GCGC 3 cut(s) 1550, 2419, 2447
Hin1I GRCGYC 3 cut(s) 1593, 1973, 2276
Hin6I GCGC 3 cut(s) 1548, 2417, 2445
HinP1I GCGC 3 cut(s) 1548, 2417, 2445
HindIII AAGCTT 2 cut(s) 144, 1212
HpaII CCGG 5 cut(s) 1358, 1391, 1437, 1578, 1632
HphI GGTGA 6 cut(s) 37, 1372, 1648, 2030, 2277, 2376
Hpy166II GTNNAC 4 cut(s) 1036, 1684, 1872, 2336
Hpy8I GTNNAC 4 cut(s) 1036, 1684, 1872, 2336
Hpy99I CGWCG 1 cut(s) 1445
HpyAV CCTTC 6 cut(s) 189, 266, 624, 1297, 1768, 2409
HpyCH4III ACNGT 4 cut(s) 1424, 1900, 1983, 2467
HpyCH4IV ACGT 7 cut(s) 1032, 1407, 1593, 1671, 1680, 2271, 2276
HpyF3I CTNAG 8 cut(s) 210, 222, 362, 558, 877, 1785, 2430, 2454
HpySE526I ACGT 7 cut(s) 1032, 1407, 1593, 1671, 1680, 2271, 2276
Hsp92I GRCGYC 3 cut(s) 1593, 1973, 2276
HspAI GCGC 3 cut(s) 1548, 2417, 2445
Kpn2I TCCGGA 1 cut(s) 1390
Ksp22I TGATCA 5 cut(s) 90, 1218, 1309, 1515, 2158
LmnI GCTCC 5 cut(s) 1174, 1360, 1935, 2191, 2416
Lsp1109I GCAGC 8 cut(s) 358, 450, 828, 993, 1578, 1939, 2395, 2437
LweI GCATC 4 cut(s) 388, 433, 1101, 2302
MaeI CTAG 9 cut(s) 186, 327, 992, 1088, 1331, 1511, 2028, 2130, 2139
MaeII ACGT 7 cut(s) 1032, 1407, 1593, 1671, 1680, 2271, 2276
MaeIII GTNAC 9 cut(s) 977, 1150, 1424, 1746, 1828, 1894, 1969, 2272, 2382
MbiI CCGCTC 1 cut(s) 1464
MfeI CAATTG 2 cut(s) 833, 2064
MflI RGATCY 1 cut(s) 2179
MhlI GDGCHC 6 cut(s) 125, 179, 363, 2214, 2226, 2476
MlsI TGGCCA 3 cut(s) 1616, 1863, 2510
MluNI TGGCCA 3 cut(s) 1616, 1863, 2510
MlyI GAGTC 6 cut(s) 183, 285, 869, 2020, 2152, 2200
MmeI TCCRAC 3 cut(s) 40, 735, 1882
Mox20I TGGCCA 3 cut(s) 1616, 1863, 2510
Mph1103I ATGCAT 1 cut(s) 55
MroI TCCGGA 1 cut(s) 1390
MroXI GAANNNNTTC 1 cut(s) 611
MscI TGGCCA 3 cut(s) 1616, 1863, 2510
MseI TTAA 7 cut(s) 11, 600, 767, 1287, 1386, 1688, 2533
MslI CAYNNNNRTG 4 cut(s) 92, 548, 806, 2001
Msp20I TGGCCA 3 cut(s) 1616, 1863, 2510
MspA1I CMGCKG 5 cut(s) 77, 283, 1652, 2252, 2450
MspCI CTTAAG 1 cut(s) 1687
MspI CCGG 5 cut(s) 1358, 1391, 1437, 1578, 1632
MspR9I CCNGG 2 cut(s) 669, 1633
MunI CAATTG 2 cut(s) 833, 2064
Mva1269I GAATGC 1 cut(s) 53
MvaI CCWGG 1 cut(s) 669
NciI CCSGG 1 cut(s) 1633
NcoI CCATGG 2 cut(s) 112, 549
NdeI CATATG 1 cut(s) 1054
NlaIV GGNNCC 3 cut(s) 1472, 2166, 2181
NmeAIII GCCGAG 1 cut(s) 1195
NmuCI GTSAC 8 cut(s) 977, 1150, 1746, 1828, 1894, 1969, 2272, 2382
NsiI ATGCAT 1 cut(s) 55
NspI RCATGY 4 cut(s) 1030, 1042, 1888, 2530
NspV TTCGAA 2 cut(s) 141, 519
PagI TCATGA 2 cut(s) 87, 2514
PciI ACATGT 2 cut(s) 1038, 2526
PcsI WCGNNNNNNNCGW 3 cut(s) 1677, 1838, 1979
PctI GAATGC 1 cut(s) 53
PdmI GAANNNNTTC 1 cut(s) 611
PfeI GAWTC 6 cut(s) 554, 957, 1394, 1628, 1798, 2282
PflMI CCANNNNNTGG 3 cut(s) 674, 1716, 2367
PleI GAGTC 6 cut(s) 183, 284, 869, 2019, 2151, 2199
PpsI GAGTC 6 cut(s) 183, 284, 869, 2019, 2151, 2199
Ppu21I YACGTR 1 cut(s) 1672
PpuMI RGGWCCY 1 cut(s) 2164
PscI ACATGT 2 cut(s) 1038, 2526
PshAI GACNNNNGTC 1 cut(s) 1148
PshBI ATTAAT 1 cut(s) 1386
Psp124BI GAGCTC 1 cut(s) 363
Psp5II RGGWCCY 1 cut(s) 2164
Psp6I CCWGG 1 cut(s) 667
PspEI GGTNACC 1 cut(s) 2382
PspFI CCCAGC 1 cut(s) 2303
PspGI CCWGG 1 cut(s) 667
PspN4I GGNNCC 3 cut(s) 1472, 2166, 2181
PspPI GGNCC 4 cut(s) 662, 1471, 2164, 2306
PspPPI RGGWCCY 1 cut(s) 2164
PstI CTGCAG 1 cut(s) 1140
PstNI CAGNNNCTG 1 cut(s) 674
PsuI RGATCY 1 cut(s) 2179
PvuII CAGCTG 4 cut(s) 77, 283, 1652, 2252
RsaI GTAC 7 cut(s) 8, 204, 1478, 1670, 1685, 2061, 2464
RsaNI GTAC 7 cut(s) 7, 203, 1477, 1669, 1684, 2060, 2463
RseI CAYNNNNRTG 4 cut(s) 92, 548, 806, 2001
SacI GAGCTC 1 cut(s) 363
SaqAI TTAA 7 cut(s) 11, 600, 767, 1287, 1386, 1688, 2533
Sau96I GGNCC 4 cut(s) 662, 1471, 2164, 2306
ScaI AGTACT 1 cut(s) 8
SchI GAGTC 6 cut(s) 183, 285, 869, 2020, 2152, 2200
ScrFI CCNGG 2 cut(s) 669, 1633
SduI GDGCHC 6 cut(s) 125, 179, 363, 2214, 2226, 2476
SfaNI GCATC 4 cut(s) 388, 433, 1101, 2302
SfcI CTRYAG 3 cut(s) 1136, 1653, 1804
SfuI TTCGAA 2 cut(s) 141, 519
SinI GGWCC 3 cut(s) 662, 1471, 2164
SmiMI CAYNNNNRTG 4 cut(s) 92, 548, 806, 2001
SmlI CTYRAG 2 cut(s) 1687, 2219
SmoI CTYRAG 2 cut(s) 1687, 2219
SpeI ACTAGT 2 cut(s) 1330, 1510
SsiI CCGC 9 cut(s) 1464, 1551, 1581, 1838, 1965, 2171, 2240, 2380, 2448
SspMI CTAG 9 cut(s) 186, 327, 992, 1088, 1331, 1511, 2028, 2130, 2139
SstI GAGCTC 1 cut(s) 363
StyD4I CCNGG 2 cut(s) 667, 1631
StyI CCWWGG 4 cut(s) 112, 549, 1087, 1914
TaaI ACNGT 4 cut(s) 1424, 1900, 1983, 2467
TaiI ACGT 7 cut(s) 1035, 1410, 1596, 1674, 1683, 2274, 2279
TaqI TCGA 5 cut(s) 141, 519, 537, 1889, 2234
TatI WGTACW 3 cut(s) 6, 202, 1683
TauI GCSGC 4 cut(s) 1553, 1841, 1968, 2450
TfiI GAWTC 6 cut(s) 554, 957, 1394, 1628, 1798, 2282
Tru1I TTAA 7 cut(s) 11, 600, 767, 1287, 1386, 1688, 2533
Tru9I TTAA 7 cut(s) 11, 600, 767, 1287, 1386, 1688, 2533
TseFI GTSAC 8 cut(s) 977, 1150, 1746, 1828, 1894, 1969, 2272, 2382
TseI GCWGC 8 cut(s) 346, 463, 841, 1006, 1566, 1927, 2408, 2450
Tsp45I GTSAC 8 cut(s) 977, 1150, 1746, 1828, 1894, 1969, 2272, 2382
TspGWI ACGGA 2 cut(s) 1640, 1857
Van91I CCANNNNNTGG 3 cut(s) 674, 1716, 2367
Vha464I CTTAAG 1 cut(s) 1687
VpaK11BI GGWCC 3 cut(s) 662, 1471, 2164
VspI ATTAAT 1 cut(s) 1386
XceI RCATGY 4 cut(s) 1030, 1042, 1888, 2530
XmaJI CCTAGG 1 cut(s) 1087
XmnI GAANNNNTTC 1 cut(s) 611
XspI CTAG 9 cut(s) 186, 327, 992, 1088, 1331, 1511, 2028, 2130, 2139
ZraI GACGTC 2 cut(s) 1594, 2277
ZrmI AGTACT 1 cut(s) 8
Zsp2I ATGCAT 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.