ATPase family associated with various cellular activities (AAA)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G15120 AT3G15120 |
| fragaria_vesca | FvH4_3g19240 FvH4_3g19240 FvH4_3g19240 FvH4_3g19240 FvH4_3g19240 FvH4_3g19240 |
| malus_domestica | MD11G1256000.v1.1 |
| prunus_persica | Prupe.4G173800_v2.0.a1 Prupe.4G173800_v2.0.a1 Prupe.4G173800_v2.0.a1 Prupe.4G173800_v2.0.a1 Prupe.4G173800_v2.0.a1 Prupe.4G173800_v2.0.a1 |
| pyrus_communis | pycom11g22640 |
| rosa_chinensis | RchiOBHm_Chr5g0032311 |
| rosa_laevigata | RLG00000033384 |
| rosa_multiflora | Rmu_co8438997.1_g000001 Rmu_sc0002290.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00048110 |
| rosa_rugosa | Rorug05G0130600 Rorug05G0130700 |
| rosa_samantha | Rh5AG224200 Rh5BG225000 Rh5CG250400 Rh5DG229800 |
| rosa_wichuraiana | Rw5G020480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 3 cut(s) | 1370, 4126, 6073 |
| AatII | GACGTC | 2 cut(s) | 1870, 5625 |
| Acc16I | TGCGCA | 1 cut(s) | 4911 |
| Acc36I | ACCTGC | 6 cut(s) | 1370, 2423, 3184, 4126, 4288, 6073 |
| AccB1I | GGYRCC | 1 cut(s) | 2755 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 3005, 4324 |
| AccBSI | CCGCTC | 5 cut(s) | 141, 345, 594, 1991, 5066 |
| AccI | GTMKAC | 1 cut(s) | 5578 |
| AccII | CGCG | 1 cut(s) | 4021 |
| AccIII | TCCGGA | 1 cut(s) | 5948 |
| AclWI | GGATC | 6 cut(s) | 2882, 3003, 3016, 4368, 4495, 5922 |
| AcoI | YGGCCR | 4 cut(s) | 3721, 4249, 4715, 6011 |
| AcuI | CTGAAG | 8 cut(s) | 89, 165, 293, 542, 1785, 3464, 4326, 5199 |
| AcvI | CACGTG | 1 cut(s) | 2603 |
| AcyI | GRCGYC | 2 cut(s) | 1867, 5622 |
| AdeI | CACNNNGTG | 2 cut(s) | 2606, 5161 |
| AfaI | GTAC | 7 cut(s) | 1506, 2146, 2186, 2375, 3634, 3677, 4884 |
| AflII | CTTAAG | 1 cut(s) | 3017 |
| AflIII | ACRYGT | 3 cut(s) | 1665, 3218, 6026 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3773, 3805 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1899, 1931 |
| Alw21I | GWGCWC | 7 cut(s) | 167, 371, 620, 1346, 2098, 2602, 5157 |
| Alw44I | GTGCAC | 3 cut(s) | 1342, 2094, 2598 |
| AlwI | GGATC | 6 cut(s) | 2882, 3003, 3016, 4368, 4495, 5922 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1808, 4265, 4624, 5570 |
| Ama87I | CYCGRG | 7 cut(s) | 134, 338, 409, 587, 658, 2838, 5474 |
| Aor13HI | TCCGGA | 1 cut(s) | 5948 |
| ApaI | GGGCCC | 2 cut(s) | 388, 637 |
| ApaLI | GTGCAC | 3 cut(s) | 1342, 2094, 2598 |
| ApeKI | GCWGC | 7 cut(s) | 1367, 3083, 3134, 3260, 3389, 5192, 5505 |
| AseI | ATTAAT | 1 cut(s) | 2585 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2162 |
| AspLEI | GCGC | 4 cut(s) | 2679, 3829, 4021, 4912 |
| AsuII | TTCGAA | 1 cut(s) | 2229 |
| AsuNHI | GCTAGC | 1 cut(s) | 4594 |
| AvaI | CYCGRG | 7 cut(s) | 134, 338, 409, 587, 658, 2838, 5474 |
| AvaII | GGWCC | 7 cut(s) | 131, 335, 584, 1877, 3459, 4679, 4700 |
| BaeGI | GKGCMC | 7 cut(s) | 379, 388, 628, 637, 1346, 2098, 2602 |
| BalI | TGGCCA | 3 cut(s) | 3723, 4251, 4717 |
| BamHI | GGATCC | 1 cut(s) | 3008 |
| BanI | GGYRCC | 1 cut(s) | 2755 |
| BanII | GRGCYC | 5 cut(s) | 167, 371, 388, 620, 637 |
| BauI | CACGAG | 2 cut(s) | 2097, 5375 |
| BbrPI | CACGTG | 1 cut(s) | 2603 |
| BbsI | GAAGAC | 3 cut(s) | 2429, 3302, 3942 |
| Bbv12I | GWGCWC | 7 cut(s) | 167, 371, 620, 1346, 2098, 2602, 5157 |
| BbvI | GCAGC | 7 cut(s) | 1354, 3095, 3121, 3247, 3376, 5179, 5517 |
| BceAI | ACGGC | 2 cut(s) | 2040, 3374 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 26, 60, 230, 264, 479, 513 |
| BciVI | GTATCC | 3 cut(s) | 1756, 2559, 3349 |
| BclI | TGATCA | 3 cut(s) | 2119, 4329, 5098 |
| BfmI | CTRYAG | 4 cut(s) | 1377, 3062, 4686, 5616 |
| BfoI | RGCGCY | 1 cut(s) | 2680 |
| BfrI | CTTAAG | 1 cut(s) | 3017 |
| BfuAI | ACCTGC | 6 cut(s) | 1370, 2423, 3184, 4126, 4288, 6073 |
| BfuI | GTATCC | 3 cut(s) | 1756, 2559, 3349 |
| BglII | AGATCT | 2 cut(s) | 3058, 3716 |
| BlpI | GCTNAGC | 2 cut(s) | 2673, 5055 |
| BmcAI | AGTACT | 1 cut(s) | 2186 |
| Bme18I | GGWCC | 7 cut(s) | 131, 335, 584, 1877, 3459, 4679, 4700 |
| BmeT110I | CYCGRG | 7 cut(s) | 134, 338, 409, 587, 658, 2838, 5474 |
| BmtI | GCTAGC | 1 cut(s) | 4598 |
| BpiI | GAAGAC | 3 cut(s) | 2429, 3302, 3942 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 6088, 6120 |
| BpmI | CTGGAG | 6 cut(s) | 151, 355, 604, 3227, 4049, 5131 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1758 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2673, 5055 |
| Bpu14I | TTCGAA | 1 cut(s) | 2229 |
| BpuEI | CTTGAG | 3 cut(s) | 3063, 4916, 5677 |
| BsaAI | YACGTR | 1 cut(s) | 2603 |
| BsaBI | GATNNNNATC | 1 cut(s) | 4947 |
| BsaHI | GRCGYC | 2 cut(s) | 1867, 5622 |
| BsaI | GGTCTC | 3 cut(s) | 934, 1111, 4853 |
| BsaWI | WCCGGW | 1 cut(s) | 5948 |
| Bse1I | ACTGG | 9 cut(s) | 1351, 2152, 2999, 4199, 4208, 4573, 5148, 5532, 5643 |
| Bse3DI | GCAATG | 4 cut(s) | 1357, 1899, 3580, 4061 |
| Bse8I | GATNNNNATC | 1 cut(s) | 4947 |
| BseAI | TCCGGA | 1 cut(s) | 5948 |
| BseJI | GATNNNNATC | 1 cut(s) | 4947 |
| BseMI | GCAATG | 4 cut(s) | 1357, 1899, 3580, 4061 |
| BseNI | ACTGG | 9 cut(s) | 1351, 2152, 2999, 4199, 4208, 4573, 5148, 5532, 5643 |
| BseSI | GKGCMC | 7 cut(s) | 379, 388, 628, 637, 1346, 2098, 2602 |
| BseXI | GCAGC | 7 cut(s) | 1354, 3095, 3121, 3247, 3376, 5179, 5517 |
| BseYI | CCCAGC | 1 cut(s) | 5004 |
| BsgI | GTGCAG | 5 cut(s) | 2017, 3075, 4316, 4497, 4533 |
| Bsh1236I | CGCG | 1 cut(s) | 4021 |
| Bsh1285I | CGRYCG | 3 cut(s) | 8, 212, 461 |
| BshNI | GGYRCC | 1 cut(s) | 2755 |
| BsiEI | CGRYCG | 3 cut(s) | 8, 212, 461 |
| BsiHKAI | GWGCWC | 7 cut(s) | 167, 371, 620, 1346, 2098, 2602, 5157 |
| BsiHKCI | CYCGRG | 7 cut(s) | 134, 338, 409, 587, 658, 2838, 5474 |
| BsmBI | CGTCTC | 2 cut(s) | 1874, 6218 |
| BsmI | GAATGC | 4 cut(s) | 796, 1034, 5456, 5804 |
| Bso31I | GGTCTC | 3 cut(s) | 934, 1111, 4853 |
| BsoBI | CYCGRG | 7 cut(s) | 134, 338, 409, 587, 658, 2838, 5474 |
| Bsp119I | TTCGAA | 1 cut(s) | 2229 |
| Bsp120I | GGGCCC | 2 cut(s) | 384, 633 |
| Bsp13I | TCCGGA | 1 cut(s) | 5948 |
| Bsp1407I | TGTACA | 1 cut(s) | 2373 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2673, 5055 |
| Bsp19I | CCATGG | 1 cut(s) | 1395 |
| BspEI | TCCGGA | 1 cut(s) | 5948 |
| BspFNI | CGCG | 1 cut(s) | 4021 |
| BspHI | TCATGA | 3 cut(s) | 1591, 5605, 5887 |
| BspMAI | CTGCAG | 4 cut(s) | 1381, 3066, 4690, 5620 |
| BspMI | ACCTGC | 6 cut(s) | 1370, 2423, 3184, 4126, 4288, 6073 |
| BspOI | GCTAGC | 1 cut(s) | 4598 |
| BspPI | GGATC | 6 cut(s) | 2882, 3003, 3016, 4368, 4495, 5922 |
| BspQI | GCTCTTC | 2 cut(s) | 1804, 3379 |
| BspT104I | TTCGAA | 1 cut(s) | 2229 |
| BspT107I | GGYRCC | 1 cut(s) | 2755 |
| BspTI | CTTAAG | 1 cut(s) | 3017 |
| BspTNI | GGTCTC | 3 cut(s) | 934, 1111, 4853 |
| BsrBI | CCGCTC | 5 cut(s) | 141, 345, 594, 1991, 5066 |
| BsrDI | GCAATG | 4 cut(s) | 1357, 1899, 3580, 4061 |
| BsrGI | TGTACA | 1 cut(s) | 2373 |
| BsrI | ACTGG | 9 cut(s) | 1351, 2152, 2999, 4199, 4208, 4573, 5148, 5532, 5643 |
| BssNI | GRCGYC | 2 cut(s) | 1867, 5622 |
| BssSI | CACGAG | 2 cut(s) | 2097, 5375 |
| BssT1I | CCWWGG | 2 cut(s) | 1395, 4703 |
| Bst2BI | CACGAG | 2 cut(s) | 2097, 5375 |
| BstACI | GRCGYC | 2 cut(s) | 1867, 5622 |
| BstAFI | CTTAAG | 1 cut(s) | 3017 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 2627, 3494, 5161 |
| BstAUI | TGTACA | 1 cut(s) | 2373 |
| BstBAI | YACGTR | 1 cut(s) | 2603 |
| BstBI | TTCGAA | 1 cut(s) | 2229 |
| BstDSI | CCRYGG | 1 cut(s) | 1395 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 2526, 2556, 3427 |
| BstFNI | CGCG | 1 cut(s) | 4021 |
| BstH2I | RGCGCY | 1 cut(s) | 2680 |
| BstHHI | GCGC | 4 cut(s) | 2679, 3829, 4021, 4912 |
| BstMCI | CGRYCG | 3 cut(s) | 8, 212, 461 |
| BstNSI | RCATGY | 6 cut(s) | 1669, 2598, 3222, 3527, 4115, 6030 |
| BstSFI | CTRYAG | 4 cut(s) | 1377, 3062, 4686, 5616 |
| BstSLI | GKGCMC | 7 cut(s) | 379, 388, 628, 637, 1346, 2098, 2602 |
| BstUI | CGCG | 1 cut(s) | 4021 |
| BstV1I | GCAGC | 7 cut(s) | 1354, 3095, 3121, 3247, 3376, 5179, 5517 |
| BstV2I | GAAGAC | 3 cut(s) | 2429, 3302, 3942 |
| BstX2I | RGATCY | 5 cut(s) | 3008, 3058, 3716, 4360, 5914 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2174 |
| BstYI | RGATCY | 5 cut(s) | 3008, 3058, 3716, 4360, 5914 |
| BsuI | GTATCC | 3 cut(s) | 1756, 2559, 3349 |
| BtgI | CCRYGG | 1 cut(s) | 1395 |
| BtgZI | GCGATG | 2 cut(s) | 2108, 2319 |
| BtsI | GCAGTG | 2 cut(s) | 2807, 3915 |
| BveI | ACCTGC | 6 cut(s) | 1370, 2423, 3184, 4126, 4288, 6073 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1808, 4265, 4624, 5570 |
| CciI | TCATGA | 3 cut(s) | 1591, 5605, 5887 |
| CfoI | GCGC | 4 cut(s) | 2679, 3829, 4021, 4912 |
| Cfr9I | CCCGGG | 5 cut(s) | 134, 338, 409, 587, 658 |
| CseI | GACGC | 1 cut(s) | 6235 |
| Csp6I | GTAC | 7 cut(s) | 1505, 2145, 2185, 2374, 3633, 3676, 4883 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2072, 2107 |
| CviQI | GTAC | 7 cut(s) | 1505, 2145, 2185, 2374, 3633, 3676, 4883 |
| DraI | TTTAAA | 1 cut(s) | 4245 |
| DraIII | CACNNNGTG | 2 cut(s) | 2606, 5161 |
| EaeI | YGGCCR | 4 cut(s) | 3721, 4249, 4715, 6011 |
| Ecl136II | GAGCTC | 3 cut(s) | 165, 369, 618 |
| Eco130I | CCWWGG | 2 cut(s) | 1395, 4703 |
| Eco147I | AGGCCT | 1 cut(s) | 4815 |
| Eco24I | GRGCYC | 5 cut(s) | 167, 371, 388, 620, 637 |
| Eco31I | GGTCTC | 3 cut(s) | 934, 1111, 4853 |
| Eco32I | GATATC | 2 cut(s) | 4631, 4949 |
| Eco47I | GGWCC | 7 cut(s) | 131, 335, 584, 1877, 3459, 4679, 4700 |
| Eco53kI | GAGCTC | 3 cut(s) | 165, 369, 618 |
| Eco57I | CTGAAG | 8 cut(s) | 89, 165, 293, 542, 1785, 3464, 4326, 5199 |
| Eco72I | CACGTG | 1 cut(s) | 2603 |
| Eco88I | CYCGRG | 7 cut(s) | 134, 338, 409, 587, 658, 2838, 5474 |
| EcoICRI | GAGCTC | 3 cut(s) | 165, 369, 618 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 2526, 2556, 3427 |
| EcoO109I | RGGNCCY | 6 cut(s) | 131, 335, 385, 584, 634, 4679 |
| EcoRI | GAATTC | 1 cut(s) | 5937 |
| EcoRV | GATATC | 2 cut(s) | 4631, 4949 |
| EcoT14I | CCWWGG | 2 cut(s) | 1395, 4703 |
| EcoT22I | ATGCAT | 1 cut(s) | 6189 |
| EcoT38I | GRGCYC | 5 cut(s) | 167, 371, 388, 620, 637 |
| ErhI | CCWWGG | 2 cut(s) | 1395, 4703 |
| Esp3I | CGTCTC | 2 cut(s) | 1874, 6218 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 4687, 4719 |
| FauI | CCCGC | 7 cut(s) | 115, 319, 568, 1951, 2030, 2201, 2571 |
| FauNDI | CATATG | 4 cut(s) | 1829, 5091, 6004, 6183 |
| FbaI | TGATCA | 3 cut(s) | 2119, 4329, 5098 |
| FblI | GTMKAC | 1 cut(s) | 5578 |
| FriOI | GRGCYC | 5 cut(s) | 167, 371, 388, 620, 637 |
| FspI | TGCGCA | 1 cut(s) | 4911 |
| GlaI | GCGC | 4 cut(s) | 2678, 3828, 4020, 4911 |
| GsaI | CCCAGC | 1 cut(s) | 5008 |
| GsuI | CTGGAG | 6 cut(s) | 151, 355, 604, 3227, 4049, 5131 |
| HaeII | RGCGCY | 1 cut(s) | 2680 |
| HgaI | GACGC | 1 cut(s) | 6235 |
| HhaI | GCGC | 4 cut(s) | 2679, 3829, 4021, 4912 |
| Hin1I | GRCGYC | 2 cut(s) | 1867, 5622 |
| Hin6I | GCGC | 4 cut(s) | 2677, 3827, 4019, 4910 |
| HinP1I | GCGC | 4 cut(s) | 2677, 3827, 4019, 4910 |
| HincII | GTYRAC | 5 cut(s) | 1771, 2717, 2805, 5626, 5731 |
| HindII | GTYRAC | 5 cut(s) | 1771, 2717, 2805, 5626, 5731 |
| HindIII | AAGCTT | 3 cut(s) | 3515, 4542, 5057 |
| Hpy99I | CGWCG | 3 cut(s) | 13, 217, 466 |
| HpyCH4IV | ACGT | 5 cut(s) | 1867, 2326, 2602, 3674, 5622 |
| HpySE526I | ACGT | 5 cut(s) | 1867, 2326, 2602, 3674, 5622 |
| Hsp92I | GRCGYC | 2 cut(s) | 1867, 5622 |
| HspAI | GCGC | 4 cut(s) | 2677, 3827, 4019, 4910 |
| KflI | GGGWCCC | 3 cut(s) | 131, 335, 584 |
| Kpn2I | TCCGGA | 1 cut(s) | 5948 |
| Ksp22I | TGATCA | 3 cut(s) | 2119, 4329, 5098 |
| LguI | GCTCTTC | 2 cut(s) | 1804, 3379 |
| Lsp1109I | GCAGC | 7 cut(s) | 1354, 3095, 3121, 3247, 3376, 5179, 5517 |
| MaeII | ACGT | 5 cut(s) | 1867, 2326, 2602, 3674, 5622 |
| MaeIII | GTNAC | 9 cut(s) | 1683, 3928, 4235, 4762, 4968, 5131, 5534, 5611, 6270 |
| MbiI | CCGCTC | 5 cut(s) | 141, 345, 594, 1991, 5066 |
| MflI | RGATCY | 5 cut(s) | 3008, 3058, 3716, 4360, 5914 |
| MlsI | TGGCCA | 3 cut(s) | 3723, 4251, 4717 |
| MluNI | TGGCCA | 3 cut(s) | 3723, 4251, 4717 |
| MlyI | GAGTC | 7 cut(s) | 1566, 1948, 2384, 2682, 3164, 4151, 5387 |
| MmeI | TCCRAC | 9 cut(s) | 885, 1062, 1224, 1398, 1534, 2271, 2412, 3314, 5510 |
| Mox20I | TGGCCA | 3 cut(s) | 3723, 4251, 4717 |
| Mph1103I | ATGCAT | 1 cut(s) | 6189 |
| MroI | TCCGGA | 1 cut(s) | 5948 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2162 |
| MscI | TGGCCA | 3 cut(s) | 3723, 4251, 4717 |
| MslI | CAYNNNNRTG | 6 cut(s) | 3468, 3627, 4054, 5094, 5586, 6007 |
| Msp20I | TGGCCA | 3 cut(s) | 3723, 4251, 4717 |
| MspA1I | CMGCKG | 3 cut(s) | 2025, 4493, 5927 |
| MspCI | CTTAAG | 1 cut(s) | 3017 |
| Mva1269I | GAATGC | 4 cut(s) | 796, 1034, 5456, 5804 |
| MvnI | CGCG | 1 cut(s) | 4021 |
| NcoI | CCATGG | 1 cut(s) | 1395 |
| NdeI | CATATG | 4 cut(s) | 1829, 5091, 6004, 6183 |
| NheI | GCTAGC | 1 cut(s) | 4594 |
| NmeAIII | GCCGAG | 3 cut(s) | 39, 243, 492 |
| NmuCI | GTSAC | 4 cut(s) | 1683, 4235, 4968, 6270 |
| NsbI | TGCGCA | 1 cut(s) | 4911 |
| NsiI | ATGCAT | 1 cut(s) | 6189 |
| NspI | RCATGY | 6 cut(s) | 1669, 2598, 3222, 3527, 4115, 6030 |
| NspV | TTCGAA | 1 cut(s) | 2229 |
| PaeI | GCATGC | 1 cut(s) | 3527 |
| PaeR7I | CTCGAG | 1 cut(s) | 2838 |
| PagI | TCATGA | 3 cut(s) | 1591, 5605, 5887 |
| PaqCI | CACCTGC | 3 cut(s) | 1370, 4126, 6073 |
| PceI | AGGCCT | 1 cut(s) | 4815 |
| PciI | ACATGT | 3 cut(s) | 1665, 3218, 6026 |
| PciSI | GCTCTTC | 2 cut(s) | 1804, 3379 |
| PctI | GAATGC | 4 cut(s) | 796, 1034, 5456, 5804 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2162 |
| PflFI | GACNNNGTC | 1 cut(s) | 6268 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 3005, 4324 |
| PfoI | TCCNGGA | 1 cut(s) | 2551 |
| Ple19I | CGATCG | 3 cut(s) | 8, 212, 461 |
| PleI | GAGTC | 7 cut(s) | 1565, 1947, 2384, 2682, 3163, 4150, 5386 |
| PmaCI | CACGTG | 1 cut(s) | 2603 |
| PmlI | CACGTG | 1 cut(s) | 2603 |
| PpsI | GAGTC | 7 cut(s) | 1565, 1947, 2384, 2682, 3163, 4150, 5386 |
| Ppu21I | YACGTR | 1 cut(s) | 2603 |
| PpuMI | RGGWCCY | 4 cut(s) | 131, 335, 584, 4679 |
| PscI | ACATGT | 3 cut(s) | 1665, 3218, 6026 |
| PshBI | ATTAAT | 1 cut(s) | 2585 |
| Psp124BI | GAGCTC | 3 cut(s) | 167, 371, 620 |
| Psp5II | RGGWCCY | 4 cut(s) | 131, 335, 584, 4679 |
| PspCI | CACGTG | 1 cut(s) | 2603 |
| PspFI | CCCAGC | 1 cut(s) | 5004 |
| PspOMI | GGGCCC | 2 cut(s) | 384, 633 |
| PspPPI | RGGWCCY | 4 cut(s) | 131, 335, 584, 4679 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4875, 4907 |
| PstI | CTGCAG | 4 cut(s) | 1381, 3066, 4690, 5620 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1808, 4265, 4624, 5570 |
| PsuI | RGATCY | 5 cut(s) | 3008, 3058, 3716, 4360, 5914 |
| PsyI | GACNNNGTC | 1 cut(s) | 6268 |
| PvuI | CGATCG | 3 cut(s) | 8, 212, 461 |
| PvuII | CAGCTG | 1 cut(s) | 4493 |
| RsaI | GTAC | 7 cut(s) | 1506, 2146, 2186, 2375, 3634, 3677, 4884 |
| RsaNI | GTAC | 7 cut(s) | 1505, 2145, 2185, 2374, 3633, 3676, 4883 |
| RseI | CAYNNNNRTG | 6 cut(s) | 3468, 3627, 4054, 5094, 5586, 6007 |
| SacI | GAGCTC | 3 cut(s) | 167, 371, 620 |
| SapI | GCTCTTC | 2 cut(s) | 1804, 3379 |
| ScaI | AGTACT | 1 cut(s) | 2186 |
| SchI | GAGTC | 7 cut(s) | 1566, 1948, 2384, 2682, 3164, 4151, 5387 |
| SfcI | CTRYAG | 4 cut(s) | 1377, 3062, 4686, 5616 |
| Sfr274I | CTCGAG | 1 cut(s) | 2838 |
| SfuI | TTCGAA | 1 cut(s) | 2229 |
| SinI | GGWCC | 7 cut(s) | 131, 335, 584, 1877, 3459, 4679, 4700 |
| SlaI | CTCGAG | 1 cut(s) | 2838 |
| SmaI | CCCGGG | 5 cut(s) | 136, 340, 411, 589, 660 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 3468, 3627, 4054, 5094, 5586, 6007 |
| SmlI | CTYRAG | 5 cut(s) | 2838, 3017, 3078, 4895, 5692 |
| SmoI | CTYRAG | 5 cut(s) | 2838, 3017, 3078, 4895, 5692 |
| SphI | GCATGC | 1 cut(s) | 3527 |
| SseBI | AGGCCT | 1 cut(s) | 4815 |
| SspI | AATATT | 3 cut(s) | 2730, 3846, 4780 |
| SstI | GAGCTC | 3 cut(s) | 167, 371, 620 |
| StuI | AGGCCT | 1 cut(s) | 4815 |
| StyI | CCWWGG | 2 cut(s) | 1395, 4703 |
| TaiI | ACGT | 5 cut(s) | 1870, 2329, 2605, 3677, 5625 |
| TaqII | GACCGA | 1 cut(s) | 4245 |
| TatI | WGTACW | 3 cut(s) | 2144, 2184, 2373 |
| TauI | GCSGC | 4 cut(s) | 418, 667, 1991, 2905 |
| TseFI | GTSAC | 4 cut(s) | 1683, 4235, 4968, 6270 |
| TseI | GCWGC | 7 cut(s) | 1367, 3083, 3134, 3260, 3389, 5192, 5505 |
| Tsp45I | GTSAC | 4 cut(s) | 1683, 4235, 4968, 6270 |
| TspGWI | ACGGA | 4 cut(s) | 3001, 3606, 3831, 4900 |
| TspMI | CCCGGG | 5 cut(s) | 134, 338, 409, 587, 658 |
| Tth111I | GACNNNGTC | 1 cut(s) | 6268 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 3005, 4324 |
| Vha464I | CTTAAG | 1 cut(s) | 3017 |
| VneI | GTGCAC | 3 cut(s) | 1342, 2094, 2598 |
| VpaK11BI | GGWCC | 7 cut(s) | 131, 335, 584, 1877, 3459, 4679, 4700 |
| VspI | ATTAAT | 1 cut(s) | 2585 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 2526, 2556, 3427 |
| XceI | RCATGY | 6 cut(s) | 1669, 2598, 3222, 3527, 4115, 6030 |
| XhoI | CTCGAG | 1 cut(s) | 2838 |
| XmaI | CCCGGG | 5 cut(s) | 134, 338, 409, 587, 658 |
| XmiI | GTMKAC | 1 cut(s) | 5578 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2162 |
| ZraI | GACGTC | 2 cut(s) | 1868, 5623 |
| ZrmI | AGTACT | 1 cut(s) | 2186 |
| Zsp2I | ATGCAT | 1 cut(s) | 6189 |