ATPase family associated with various cellular activities (AAA)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G15120 AT3G15120 |
| fragaria_vesca | FvH4_3g19240 FvH4_3g19240 FvH4_3g19240 FvH4_3g19240 FvH4_3g19240 FvH4_3g19240 |
| malus_domestica | MD11G1256000.v1.1 |
| prunus_persica | Prupe.4G173800_v2.0.a1 Prupe.4G173800_v2.0.a1 Prupe.4G173800_v2.0.a1 Prupe.4G173800_v2.0.a1 Prupe.4G173800_v2.0.a1 Prupe.4G173800_v2.0.a1 |
| pyrus_communis | pycom11g22640 |
| rosa_chinensis | RchiOBHm_Chr5g0032311 |
| rosa_laevigata | RLG00000033384 |
| rosa_multiflora | Rmu_co8438997.1_g000001 Rmu_sc0002290.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00048110 |
| rosa_rugosa | Rorug05G0130600 Rorug05G0130700 |
| rosa_samantha | Rh5AG224200 Rh5BG225000 Rh5CG250400 Rh5DG229800 |
| rosa_wichuraiana | Rw5G020480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 254 |
| AgsI | TTSAA | 4 cut(s) | 100, 226, 287, 309 |
| AhlI | ACTAGT | 1 cut(s) | 25 |
| AluBI | AGCT | 2 cut(s) | 188, 235 |
| AluI | AGCT | 2 cut(s) | 188, 235 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 191 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 4 cut(s) | 185, 188, 291, 294 |
| ApoI | RAATTY | 1 cut(s) | 254 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 64 |
| AspS9I | GGNCC | 2 cut(s) | 74, 147 |
| AsuHPI | GGTGA | 1 cut(s) | 151 |
| AvaII | GGWCC | 2 cut(s) | 74, 147 |
| BbsI | GAAGAC | 1 cut(s) | 275 |
| BbvI | GCAGC | 4 cut(s) | 175, 197, 278, 281 |
| BccI | CCATC | 1 cut(s) | 65 |
| BcuI | ACTAGT | 1 cut(s) | 25 |
| BfaI | CTAG | 1 cut(s) | 26 |
| BfmI | CTRYAG | 1 cut(s) | 298 |
| BisI | GCNGC | 4 cut(s) | 186, 189, 292, 295 |
| BlsI | GCNGC | 4 cut(s) | 187, 190, 293, 296 |
| Bme18I | GGWCC | 2 cut(s) | 74, 147 |
| BmgT120I | GGNCC | 2 cut(s) | 74, 147 |
| BpiI | GAAGAC | 1 cut(s) | 275 |
| Bse1I | ACTGG | 1 cut(s) | 240 |
| Bse3DI | GCAATG | 1 cut(s) | 171 |
| BseMI | GCAATG | 1 cut(s) | 171 |
| BseMII | CTCAG | 3 cut(s) | 24, 33, 194 |
| BseNI | ACTGG | 1 cut(s) | 240 |
| BseXI | GCAGC | 4 cut(s) | 175, 197, 278, 281 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsnI | GGCC | 1 cut(s) | 5 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 3 cut(s) | 25, 32, 193 |
| BsrDI | GCAATG | 1 cut(s) | 171 |
| BsrI | ACTGG | 1 cut(s) | 240 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 170 |
| BstC8I | GCNNGC | 1 cut(s) | 233 |
| BstDEI | CTNAG | 3 cut(s) | 19, 33, 180 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 170 |
| BstSFI | CTRYAG | 1 cut(s) | 298 |
| BstV1I | GCAGC | 4 cut(s) | 175, 197, 278, 281 |
| BstV2I | GAAGAC | 1 cut(s) | 275 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsIMutI | CAGTG | 1 cut(s) | 247 |
| Cac8I | GCNNGC | 1 cut(s) | 233 |
| CaiI | CAGNNNCTG | 1 cut(s) | 191 |
| Cfr13I | GGNCC | 2 cut(s) | 74, 147 |
| CviAII | CATG | 1 cut(s) | 217 |
| CviJI | RGCY | 5 cut(s) | 5, 81, 188, 231, 235 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 81, 188, 231, 235 |
| DdeI | CTNAG | 3 cut(s) | 19, 33, 180 |
| Eco47I | GGWCC | 2 cut(s) | 74, 147 |
| FaeI | CATG | 1 cut(s) | 220 |
| FaiI | YATR | 3 cut(s) | 122, 218, 300 |
| FatI | CATG | 1 cut(s) | 216 |
| Fnu4HI | GCNGC | 4 cut(s) | 186, 189, 292, 295 |
| Fsp4HI | GCNGC | 4 cut(s) | 186, 189, 292, 295 |
| FspBI | CTAG | 1 cut(s) | 26 |
| GluI | GCNGC | 4 cut(s) | 186, 189, 292, 295 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| Hin1II | CATG | 1 cut(s) | 220 |
| HinfI | GANTC | 2 cut(s) | 176, 305 |
| HphI | GGTGA | 1 cut(s) | 151 |
| Hpy188I | TCNGA | 2 cut(s) | 70, 88 |
| Hpy188III | TCNNGA | 2 cut(s) | 21, 309 |
| HpyAV | CCTTC | 3 cut(s) | 93, 138, 271 |
| HpyCH4V | TGCA | 1 cut(s) | 164 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 170 |
| HpyF3I | CTNAG | 3 cut(s) | 19, 33, 180 |
| Hsp92II | CATG | 1 cut(s) | 220 |
| LpnPI | CCDG | 7 cut(s) | 6, 42, 89, 167, 245, 245, 253 |
| Lsp1109I | GCAGC | 4 cut(s) | 175, 197, 278, 281 |
| MaeI | CTAG | 1 cut(s) | 26 |
| MaeIII | GTNAC | 1 cut(s) | 28 |
| MboII | GAAGA | 2 cut(s) | 121, 275 |
| MluCI | AATT | 1 cut(s) | 254 |
| MnlI | CCTC | 1 cut(s) | 28 |
| MroXI | GAANNNNTTC | 1 cut(s) | 64 |
| MspA1I | CMGCKG | 1 cut(s) | 188 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 170 |
| NlaIII | CATG | 1 cut(s) | 220 |
| PdmI | GAANNNNTTC | 1 cut(s) | 64 |
| PfeI | GAWTC | 2 cut(s) | 176, 305 |
| PkrI | GCNGC | 4 cut(s) | 187, 190, 293, 296 |
| PspPI | GGNCC | 2 cut(s) | 74, 147 |
| PstNI | CAGNNNCTG | 1 cut(s) | 191 |
| PvuII | CAGCTG | 1 cut(s) | 188 |
| SatI | GCNGC | 4 cut(s) | 186, 189, 292, 295 |
| Sau96I | GGNCC | 2 cut(s) | 74, 147 |
| SetI | ASST | 3 cut(s) | 149, 190, 237 |
| SfcI | CTRYAG | 1 cut(s) | 298 |
| SinI | GGWCC | 2 cut(s) | 74, 147 |
| SpeI | ACTAGT | 1 cut(s) | 25 |
| Sse9I | AATT | 1 cut(s) | 254 |
| SspMI | CTAG | 1 cut(s) | 26 |
| TasI | AATT | 1 cut(s) | 254 |
| TfiI | GAWTC | 2 cut(s) | 176, 305 |
| TscAI | CASTG | 1 cut(s) | 247 |
| TseI | GCWGC | 4 cut(s) | 185, 188, 291, 294 |
| TspDTI | ATGAA | 2 cut(s) | 105, 267 |
| TspRI | CASTG | 1 cut(s) | 247 |
| VpaK11BI | GGWCC | 2 cut(s) | 74, 147 |
| XapI | RAATTY | 1 cut(s) | 254 |
| XmnI | GAANNNNTTC | 1 cut(s) | 64 |
| XspI | CTAG | 1 cut(s) | 26 |