Rmu_sc0002579.1_g000001

Belongs to the peptidase S8 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002579.1
Physical Location & Seq
Reverse (-)
1 .. 3327
3327 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002579.1_g000001.1.cds

Sequence Viewer

Length: 1225 bp
atgggaagaatttatggggtgcatttggtggtgttaattgttttggggatggttgtgagctcttggtgtcaggatgatgatgattatgataacatctctgctgtgtatattgtcactcttaaacaagctcctgttgctcattacttggctgacctgagaaagaacagtcaaggtttgaatggggatactgaaaggttgagcattcacaaaccaagatctataaatatttcaaggacggatcctaagtatgcctcatacattgctcgagttcatgattcattattgaggagggcgttgaaaggggagaaatatctgaagctgtacagctaccactacttgattaatgggtttgctgtgcttgttaccccggatcaggttaataagctttccaggaggagagaagtagcaaatgtggtcctagatttctctgttagaactgcaacaacccatactcctcagttcttgggtttaccacaaggagcatgggtccaaggaggtggatttaaatcagccggagaaggggttgtgattggatttattgatactggcattgatccaacacacagtagttttgctgataattcatctaaaaatccatatccagttccagctcatttctcaggcgtctgtgaggttactcgagattttccatctggttcatgcaataggaagcttatagcggcccgccattttgcagcatctgctataaccaggggtgttttcaatatatcccaggactatgcttctccttttgatggtgatggccacggcacgcacactgcttccattgctgcaggaaaccatggaattccagtggttgttgctgggcatcattttggacatgcaagtgggatggctcctcgatcacacattgctgtttacaaggcattgtacaaaagctttggaggctttgctgctgatgttgttgccgcaatagaccaggctgctcaggatggggttgacattataagcttatcaatcactcccaatagacgtcctcccggagttgcaacatttttcaaccccatagatatggcaacactatcagccgtaaaggttggtatatttgttgtccaagcagcaggaaatactggaccatcaccaaaaagcatgtcttccttcagtccatggatcttcactgttggttctgcttctcatgacagaacctacagcaactctataacccttggcaacaatgtgaccattcctggagttggacttgcac

Protein Analysis

408

Amino Acids

43.62

Weight (kDa)

9.1

Isoelectric Point (pI)

36.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 968
AatII GACGTC 1 cut(s) 997
AciI CCGC 3 cut(s) 680, 685, 930
AclWI GGATC 5 cut(s) 233, 246, 378, 548, 1139
AcoI YGGCCR 1 cut(s) 763
AcsI RAATTY 2 cut(s) 9, 807
AcuI CTGAAG 2 cut(s) 335, 1105
AcyI GRCGYC 2 cut(s) 624, 994
AfaI GTAC 2 cut(s) 323, 893
AfiI CCNNNNNNNGG 4 cut(s) 373, 519, 755, 1214
AgsI TTSAA 5 cut(s) 178, 231, 298, 724, 1021
AjnI CCWGG 5 cut(s) 389, 710, 732, 939, 1207
AluBI AGCT 9 cut(s) 60, 128, 319, 327, 385, 611, 673, 900, 972
AluI AGCT 9 cut(s) 60, 128, 319, 327, 385, 611, 673, 900, 972
Alw21I GWGCWC 1 cut(s) 62
AlwI GGATC 5 cut(s) 233, 246, 378, 548, 1139
AlwNI CAGNNNCTG 1 cut(s) 701
Ama87I CYCGRG 2 cut(s) 264, 639
AoxI GGCC 2 cut(s) 681, 763
ApeKI GCWGC 5 cut(s) 695, 791, 914, 944, 1079
ApoI RAATTY 2 cut(s) 9, 807
ArsI GACNNNNNNTTYG 2 cut(s) 1097, 1129
AseI ATTAAT 1 cut(s) 342
AspS9I GGNCC 4 cut(s) 415, 487, 682, 1094
AsuC2I CCSGG 2 cut(s) 368, 1002
AsuHPI GGTGA 2 cut(s) 770, 1092
AvaI CYCGRG 2 cut(s) 264, 639
AvaII GGWCC 3 cut(s) 415, 487, 1094
BalI TGGCCA 1 cut(s) 765
BamHI GGATCC 1 cut(s) 238
BanII GRGCYC 1 cut(s) 62
BbsI GAAGAC 1 cut(s) 1107
Bbv12I GWGCWC 1 cut(s) 62
BbvI GCAGC 5 cut(s) 707, 778, 901, 931, 1091
BccI CCATC 7 cut(s) 43, 658, 749, 755, 847, 947, 1105
BceAI ACGGC 2 cut(s) 784, 1034
BciT130I CCWGG 5 cut(s) 391, 712, 734, 941, 1209
BciVI GTATCC 1 cut(s) 178
BcnI CCSGG 2 cut(s) 368, 1002
BfaI CTAG 1 cut(s) 419
BfmI CTRYAG 2 cut(s) 792, 1168
BfuI GTATCC 1 cut(s) 178
BglII AGATCT 1 cut(s) 215
BisI GCNGC 7 cut(s) 681, 696, 792, 915, 930, 945, 1080
BlsI GCNGC 7 cut(s) 682, 697, 793, 916, 931, 946, 1081
Bme1390I CCNGG 7 cut(s) 368, 391, 712, 734, 941, 1002, 1209
Bme18I GGWCC 3 cut(s) 415, 487, 1094
BmeT110I CYCGRG 2 cut(s) 264, 639
BmgT120I GGNCC 4 cut(s) 415, 487, 682, 1094
BmiI GGNNCC 3 cut(s) 240, 488, 858
BmrFI CCNGG 7 cut(s) 368, 391, 712, 734, 941, 1002, 1209
BmsI GCATC 2 cut(s) 707, 838
BpiI GAAGAC 1 cut(s) 1107
Bpu10I CCTNAGC 1 cut(s) 948
BpuMI CCSGG 2 cut(s) 368, 1002
BsaBI GATNNNNATC 1 cut(s) 505
BsaHI GRCGYC 2 cut(s) 624, 994
BsaJI CCNNGG 8 cut(s) 366, 490, 711, 732, 766, 802, 1127, 1186
BsaXI ACNNNNNCTCC 6 cut(s) 436, 466, 471, 501, 507, 537
Bsc4I CCNNNNNNNGG 4 cut(s) 373, 519, 755, 1214
Bse1I ACTGG 4 cut(s) 550, 602, 812, 1096
Bse3DI GCAATG 3 cut(s) 258, 786, 870
Bse8I GATNNNNATC 1 cut(s) 505
BseBI CCWGG 5 cut(s) 391, 712, 734, 941, 1209
BseDI CCNNGG 8 cut(s) 366, 490, 711, 732, 766, 802, 1127, 1186
BseGI GGATG 4 cut(s) 54, 79, 858, 958
BseJI GATNNNNATC 1 cut(s) 505
BseLI CCNNNNNNNGG 4 cut(s) 373, 519, 755, 1214
BseMI GCAATG 3 cut(s) 258, 786, 870
BseMII CTCAG 4 cut(s) 146, 470, 633, 962
BseNI ACTGG 4 cut(s) 550, 602, 812, 1096
BseRI GAGGAG 4 cut(s) 301, 409, 444, 849
BseXI GCAGC 5 cut(s) 707, 778, 901, 931, 1091
BseYI CCCAGC 1 cut(s) 824
BshFI GGCC 2 cut(s) 683, 765
BsiHKAI GWGCWC 1 cut(s) 62
BsiHKCI CYCGRG 2 cut(s) 264, 639
BsiSI CCGG 3 cut(s) 368, 513, 1002
BslI CCNNNNNNNGG 4 cut(s) 373, 519, 755, 1214
BsmI GAATGC 1 cut(s) 201
BsnI GGCC 2 cut(s) 683, 765
BsoBI CYCGRG 2 cut(s) 264, 639
Bsp1286I GDGCHC 1 cut(s) 62
Bsp1407I TGTACA 2 cut(s) 321, 891
Bsp143I GATC 6 cut(s) 215, 238, 370, 553, 863, 1131
Bsp19I CCATGG 2 cut(s) 802, 1127
BspACI CCGC 3 cut(s) 680, 685, 930
BspANI GGCC 2 cut(s) 683, 765
BspCNI CTCAG 4 cut(s) 147, 469, 632, 961
BspHI TCATGA 2 cut(s) 271, 1156
BspLI GGNNCC 3 cut(s) 240, 488, 858
BspMAI CTGCAG 1 cut(s) 796
BspPI GGATC 5 cut(s) 233, 246, 378, 548, 1139
BsrDI GCAATG 3 cut(s) 258, 786, 870
BsrGI TGTACA 2 cut(s) 321, 891
BsrI ACTGG 4 cut(s) 550, 602, 812, 1096
BssECI CCNNGG 8 cut(s) 366, 490, 711, 732, 766, 802, 1127, 1186
BssMI GATC 6 cut(s) 215, 238, 370, 553, 863, 1131
BssNI GRCGYC 2 cut(s) 624, 994
BssT1I CCWWGG 4 cut(s) 490, 802, 1127, 1186
Bst2UI CCWGG 5 cut(s) 391, 712, 734, 941, 1209
Bst4CI ACNGT 3 cut(s) 167, 566, 1141
BstACI GRCGYC 2 cut(s) 624, 994
BstAPI GCANNNNNTGC 1 cut(s) 701
BstAUI TGTACA 2 cut(s) 321, 891
BstC8I GCNNGC 2 cut(s) 685, 773
BstDEI CTNAG 5 cut(s) 155, 243, 456, 619, 948
BstDSI CCRYGG 3 cut(s) 766, 802, 1127
BstF5I GGATG 4 cut(s) 54, 79, 858, 958
BstKTI GATC 6 cut(s) 218, 241, 373, 556, 866, 1134
BstMBI GATC 6 cut(s) 215, 238, 370, 553, 863, 1131
BstMWI GCNNNNNNNGC 4 cut(s) 134, 701, 788, 906
BstNI CCWGG 5 cut(s) 391, 712, 734, 941, 1209
BstNSI RCATGY 2 cut(s) 845, 1114
BstSCI CCNGG 7 cut(s) 366, 389, 710, 732, 939, 1000, 1207
BstSFI CTRYAG 2 cut(s) 792, 1168
BstV1I GCAGC 5 cut(s) 707, 778, 901, 931, 1091
BstV2I GAAGAC 1 cut(s) 1107
BstX2I RGATCY 3 cut(s) 215, 238, 1131
BstXI CCANNNNNNTGG 2 cut(s) 497, 1033
BstYI RGATCY 3 cut(s) 215, 238, 1131
BsuI GTATCC 1 cut(s) 178
BsuRI GGCC 2 cut(s) 683, 765
BtgI CCRYGG 3 cut(s) 766, 802, 1127
BtsCI GGATG 4 cut(s) 54, 79, 858, 958
BtsI GCAGTG 1 cut(s) 777
BtsIMutI CAGTG 3 cut(s) 777, 819, 1137
Cac8I GCNNGC 2 cut(s) 685, 773
CaiI CAGNNNCTG 1 cut(s) 701
CciI TCATGA 2 cut(s) 271, 1156
Cfr13I GGNCC 4 cut(s) 415, 487, 682, 1094
CseI GACGC 1 cut(s) 613
Csp6I GTAC 2 cut(s) 322, 892
CviAII CATG 8 cut(s) 272, 483, 660, 803, 842, 1111, 1128, 1157
CviQI GTAC 2 cut(s) 322, 892
DdeI CTNAG 5 cut(s) 155, 243, 456, 619, 948
DpnI GATC 6 cut(s) 217, 240, 372, 555, 865, 1133
DpnII GATC 6 cut(s) 215, 238, 370, 553, 863, 1131
DraI TTTAAA 1 cut(s) 505
EaeI YGGCCR 1 cut(s) 763
Ecl136II GAGCTC 1 cut(s) 60
Eco130I CCWWGG 4 cut(s) 490, 802, 1127, 1186
Eco24I GRGCYC 1 cut(s) 62
Eco47I GGWCC 3 cut(s) 415, 487, 1094
Eco53kI GAGCTC 1 cut(s) 60
Eco57I CTGAAG 2 cut(s) 335, 1105
Eco88I CYCGRG 2 cut(s) 264, 639
EcoICRI GAGCTC 1 cut(s) 60
EcoRI GAATTC 1 cut(s) 807
EcoRII CCWGG 5 cut(s) 389, 710, 732, 939, 1207
EcoT14I CCWWGG 4 cut(s) 490, 802, 1127, 1186
EcoT38I GRGCYC 1 cut(s) 62
ErhI CCWWGG 4 cut(s) 490, 802, 1127, 1186
FaeI CATG 8 cut(s) 275, 486, 663, 806, 845, 1114, 1131, 1160
FalI AAGNNNNNCTT 2 cut(s) 1099, 1131
FatI CATG 8 cut(s) 271, 482, 659, 802, 841, 1110, 1127, 1156
FauI CCCGC 1 cut(s) 692
Fnu4HI GCNGC 7 cut(s) 681, 696, 792, 915, 930, 945, 1080
FokI GGATG 4 cut(s) 61, 86, 865, 965
FriOI GRGCYC 1 cut(s) 62
Fsp4HI GCNGC 7 cut(s) 681, 696, 792, 915, 930, 945, 1080
FspBI CTAG 1 cut(s) 419
GluI GCNGC 7 cut(s) 681, 696, 792, 915, 930, 945, 1080
GsaI CCCAGC 1 cut(s) 828
HaeIII GGCC 2 cut(s) 683, 765
HapII CCGG 3 cut(s) 368, 513, 1002
HgaI GACGC 1 cut(s) 613
Hin1I GRCGYC 2 cut(s) 624, 994
Hin1II CATG 8 cut(s) 275, 486, 663, 806, 845, 1114, 1131, 1160
HincII GTYRAC 1 cut(s) 961
HindII GTYRAC 1 cut(s) 961
HindIII AAGCTT 4 cut(s) 383, 671, 898, 970
HinfI GANTC 1 cut(s) 275
HpaII CCGG 3 cut(s) 368, 513, 1002
HphI GGTGA 2 cut(s) 770, 1092
Hpy166II GTNNAC 3 cut(s) 470, 880, 961
Hpy188I TCNGA 1 cut(s) 315
Hpy188III TCNNGA 5 cut(s) 71, 272, 641, 950, 1157
Hpy8I GTNNAC 3 cut(s) 470, 880, 961
HpyAV CCTTC 2 cut(s) 512, 1129
HpyCH4III ACNGT 3 cut(s) 167, 566, 1141
HpyCH4IV ACGT 1 cut(s) 994
HpyCH4V TGCA 8 cut(s) 22, 440, 663, 695, 794, 845, 1010, 1223
HpyF10VI GCNNNNNNNGC 4 cut(s) 134, 701, 788, 906
HpyF3I CTNAG 5 cut(s) 155, 243, 456, 619, 948
HpySE526I ACGT 1 cut(s) 994
Hsp92I GRCGYC 2 cut(s) 624, 994
Hsp92II CATG 8 cut(s) 275, 486, 663, 806, 845, 1114, 1131, 1160
Kzo9I GATC 6 cut(s) 215, 238, 370, 553, 863, 1131
LmnI GCTCC 3 cut(s) 133, 479, 862
Lsp1109I GCAGC 5 cut(s) 707, 778, 901, 931, 1091
LweI GCATC 2 cut(s) 707, 838
MaeI CTAG 1 cut(s) 419
MaeII ACGT 1 cut(s) 994
MaeIII GTNAC 4 cut(s) 112, 361, 634, 1198
MalI GATC 6 cut(s) 217, 240, 372, 555, 865, 1133
MboI GATC 6 cut(s) 215, 238, 370, 553, 863, 1131
MboII GAAGA 3 cut(s) 18, 1107, 1126
MflI RGATCY 3 cut(s) 215, 238, 1131
MhlI GDGCHC 1 cut(s) 62
MlsI TGGCCA 1 cut(s) 765
MluCI AATT 4 cut(s) 9, 36, 580, 807
MluNI TGGCCA 1 cut(s) 765
MmeI TCCRAC 2 cut(s) 581, 1195
Mox20I TGGCCA 1 cut(s) 765
MscI TGGCCA 1 cut(s) 765
MseI TTAA 5 cut(s) 35, 120, 342, 378, 504
MslI CAYNNNNRTG 2 cut(s) 846, 1031
Msp20I TGGCCA 1 cut(s) 765
MspI CCGG 3 cut(s) 368, 513, 1002
MspR9I CCNGG 7 cut(s) 368, 391, 712, 734, 941, 1002, 1209
Mva1269I GAATGC 1 cut(s) 201
MvaI CCWGG 5 cut(s) 391, 712, 734, 941, 1209
MwoI GCNNNNNNNGC 4 cut(s) 134, 701, 788, 906
NciI CCSGG 2 cut(s) 368, 1002
NcoI CCATGG 2 cut(s) 802, 1127
NdeII GATC 6 cut(s) 215, 238, 370, 553, 863, 1131
NlaIII CATG 8 cut(s) 275, 486, 663, 806, 845, 1114, 1131, 1160
NlaIV GGNNCC 3 cut(s) 240, 488, 858
NmuCI GTSAC 2 cut(s) 112, 1198
NspI RCATGY 2 cut(s) 845, 1114
PaeR7I CTCGAG 2 cut(s) 264, 639
PagI TCATGA 2 cut(s) 271, 1156
PctI GAATGC 1 cut(s) 201
PfeI GAWTC 1 cut(s) 275
PfoI TCCNGGA 3 cut(s) 389, 1000, 1207
PkrI GCNGC 7 cut(s) 682, 697, 793, 916, 931, 946, 1081
PshBI ATTAAT 1 cut(s) 342
PsiI TTATAA 1 cut(s) 968
Psp124BI GAGCTC 1 cut(s) 62
Psp6I CCWGG 5 cut(s) 389, 710, 732, 939, 1207
PspFI CCCAGC 1 cut(s) 824
PspGI CCWGG 5 cut(s) 389, 710, 732, 939, 1207
PspN4I GGNNCC 3 cut(s) 240, 488, 858
PspPI GGNCC 4 cut(s) 415, 487, 682, 1094
PspXI VCTCGAGB 1 cut(s) 264
PstI CTGCAG 1 cut(s) 796
PstNI CAGNNNCTG 1 cut(s) 701
PsuI RGATCY 3 cut(s) 215, 238, 1131
RsaI GTAC 2 cut(s) 323, 893
RsaNI GTAC 2 cut(s) 322, 892
RseI CAYNNNNRTG 2 cut(s) 846, 1031
SacI GAGCTC 1 cut(s) 62
SaqAI TTAA 5 cut(s) 35, 120, 342, 378, 504
SatI GCNGC 7 cut(s) 681, 696, 792, 915, 930, 945, 1080
Sau3AI GATC 6 cut(s) 215, 238, 370, 553, 863, 1131
Sau96I GGNCC 4 cut(s) 415, 487, 682, 1094
ScrFI CCNGG 7 cut(s) 368, 391, 712, 734, 941, 1002, 1209
SduI GDGCHC 1 cut(s) 62
SfaNI GCATC 2 cut(s) 707, 838
SfcI CTRYAG 2 cut(s) 792, 1168
Sfr274I CTCGAG 2 cut(s) 264, 639
SinI GGWCC 3 cut(s) 415, 487, 1094
SlaI CTCGAG 2 cut(s) 264, 639
SmiI ATTTAAAT 1 cut(s) 505
SmiMI CAYNNNNRTG 2 cut(s) 846, 1031
SmlI CTYRAG 2 cut(s) 264, 639
SmoI CTYRAG 2 cut(s) 264, 639
Sse9I AATT 4 cut(s) 9, 36, 580, 807
SsiI CCGC 3 cut(s) 680, 685, 930
SspI AATATT 1 cut(s) 226
SspMI CTAG 1 cut(s) 419
SstI GAGCTC 1 cut(s) 62
StyD4I CCNGG 7 cut(s) 366, 389, 710, 732, 939, 1000, 1207
StyI CCWWGG 4 cut(s) 490, 802, 1127, 1186
SwaI ATTTAAAT 1 cut(s) 505
TaaI ACNGT 3 cut(s) 167, 566, 1141
TaiI ACGT 1 cut(s) 997
TaqI TCGA 3 cut(s) 265, 640, 862
TasI AATT 4 cut(s) 9, 36, 580, 807
TatI WGTACW 2 cut(s) 321, 891
TauI GCSGC 2 cut(s) 683, 932
TfiI GAWTC 1 cut(s) 275
Tru1I TTAA 5 cut(s) 35, 120, 342, 378, 504
Tru9I TTAA 5 cut(s) 35, 120, 342, 378, 504
TscAI CASTG 3 cut(s) 784, 819, 1144
TseFI GTSAC 2 cut(s) 112, 1198
TseI GCWGC 5 cut(s) 695, 791, 914, 944, 1079
Tsp45I GTSAC 2 cut(s) 112, 1198
TspDTI ATGAA 4 cut(s) 260, 267, 573, 648
TspGWI ACGGA 1 cut(s) 251
TspRI CASTG 3 cut(s) 784, 819, 1144
VpaK11BI GGWCC 3 cut(s) 415, 487, 1094
VspI ATTAAT 1 cut(s) 342
XapI RAATTY 2 cut(s) 9, 807
XceI RCATGY 2 cut(s) 845, 1114
XcmI CCANNNNNNNNNTGG 1 cut(s) 480
XhoI CTCGAG 2 cut(s) 264, 639
XspI CTAG 1 cut(s) 419
ZraI GACGTC 1 cut(s) 995
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.