Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0002994

Physical Location & Seq

Genomic Coordinates Reverse (-)

13917315 .. 13924034

Gene Structure 6720 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG135800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2538 bp

ATGGGAAGAATTTATGGGGTGCATTTGGTGGTGTTACTTGTTTTGGGGATGGTTGTGAGCTCTTGGTGTCAGGATGATGATGATTATGATAACATCTCTGCTGTGTATATTGTCACTCTTAAACAAGCTCCTGTTGCTCATTACTTGGCTGACCTGAGAAAGAACAGTCAAGGTTTGAATGGGGATACTGAAAGGTTGAGCATTCACAAACCAAGATCTATAAATATTTCAAGGACGGATCCTAAGTATGCCTCATACATTGCTCGAGTTCATGATTCATTATTGAGGAGGGCGTTGAAAGGGGAGAAATATCTGAAGCTGTACAGCTACCACTACTTGATTAATGGGTTTGCTGTGCTTGTTACCCCGGATCAGGTTAATAAGCTTTCCAGGAGGAGAGAAGTAGCAAATGTGGTCCTGGATTTCTCTGTTAGAACTGCAACAACCCATACTCCTCAGTTCTTGGGTTTACCACAGGGAGCATGGGTCCAAGGAGGTGGATTTAAATCAGCCGGAGAAGGGGTTGTGATTGGATTTATTGATACTGGCATTGATCCAACACACAGTAGTTTTGCTGATAATTCATCTAAAAATCCATATCCAGTTCCAGCTCATTTCTCAGGCGTCTGTGAAGTTACTCGAGATTTTCCATCTGGTTCATGCAATAGGAAGCTTATAGCGGCCCGCCATTTTGCAGCATCTGCTATAACCAGGGGTGTTTTCAATATATCCCAGGACTATGCTTCTCCTTTTGATGGTGATGGCCACGGCACGCACACTGCTTCCATTGCTGCAGGAAACCATGGAATTCCAGTGGTTGTTGCTGGGCATCATTTTGGACATGCAAGTGGGATGGCTCCTCGATCACACATTGCTGTTTACAAGGCATTGTACAAAAGCTTCGGAGGCTTTGCTGCTGATGTTGTTGCCGCAATAGACCAGGCTGCTCAGGATGGGGTTGACATTATAAGCTTATCGATCACTCCCAATAGACGTCCTCCCGGAGTTGCAACATTTTTTAACCCCATAGATATGGCAACACTATCAGCCGTAAAGGTTGGTATATTTGTTGTCCAAGCAGCAGGAAATACTGGACCATCACCAAAAAGCATGTCGTCCTTCAGTCCATGGATCTTCACTGTTGGTTCTGCTTCTCATGACAGAACCTACAGCAACTCTATAACCCTTGGCAACAATGTGACCATTCCTGGAGTTGGACTTGCACCTGGTACACAGAATGATACAATGTACACGCTGATTTCTGCAATGCATGCTTTGAATAATGACACAAAAGTTACAGACGATATGTATGTAAGTGAATGCCAAGACTCGAGCAACTTCAATCAGGATCTGGTCCGTGGAAACCTCTTGATCTGCAGCTACTCAATTCGATTTGTGCTTGGAATGTCCACAATACAGCAAGCCATACAAACAGCACAAAATTTAAGTGCAGTTGGTGTTGTTTTTTATATGGATGCTTTTGTGATTGGTTATCAACTCAACCCAACTCCAATGAAAATACCTGGCATCATAATTTCTTCCCCGGAGGATTCGAAGGCTTTTATCCAATACTACAATCGTTCCGTGGAGAGAGATATCATGAAGAAAATTATCAAATTTGGGGCAGTTGCAGCCATTTGTGGTGGTACAAAAGCGAACTACAGTAGTACTTCTCCAAAGATCATGTATTACTCTGCTCGAGGGCCAGATCCAGAAGACAATTCTCTTGATATTGCAGACATAATGAAACCCAATTTGGTAGCTCCTGGGAACTCTATATGGGCCGCTTGGAGTTCTATGGGCACAGACTCGGTTGAATTTCAAGGTGAGAGCTTTGCAATGATGTCTGGGACAAGCATGGCTGCTCCTCATGTTGCTGGTCTTGCTGCACTGGTTAAGCAGAAGTTTCCCAATTTCAGTCCTTCAGCCGTTGCATCTGCGCTTTCAACAACAGCTTCTCTATATGACAAGTCTGGTGGGCCAATAATGGCTCAGCGTGCTTATGCCTTTCCAGATCAAAACCAGTCTCCAGCAACGCCGTTTGACATGGGCAGTGGTTTTGTAAATGCTACAGGAGCACTAAATCCAGGATTGATTTTTGATTCCAGTTATGACAATTATATGTCATTTCTTTGTGGCATTAATGGATCCGCTCCTGTGGTTTTGAATTACACTGGTCAGAGCTGTTGGGTTTATAACTCTACCATCAATGCTGGAGACCTGAATTTACCATCAATAACAATAGCAAACCTCAACCAGTCTAGAACTGTTCTAAGAACCGTGATCAACGTTGCTGGAAATGAGACTTATAGTATCGGCTGGAGTGCGCCTTTCGGAGTTTCGCTAAAAGTGTCTCCATCACATTTTTACATTGCTAGTGGGGAGACACAGGTCTTGAGTGTATTCTTCAATGCTACGAGCAACAGCACAGCTGCTAGCTATGGAAGGATAGGACTATTTGGAAATCAAGGTCATGTTGTCAACATTCCTTTGTCTGTCATTGTCAAAATCACATATAATACTACCATTAACAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 Peptidase_S8

Protein Analysis

845

Amino Acids

90.39

Weight (kDa)

7.65

Isoelectric Point (pI)

38.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	35 - 146	4.4e-13	Peptidase inhibitor I9
Peptidase_S8	PF00082	172 - 665	1.1e-44	Subtilase family
fn3_6	PF17766	740 - 833	3.4e-15	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002994)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30600 AT4G20430 AT4G20430 AT4G20430 AT5G44530 AT5G44530 AT5G44530
fragaria_vesca	FvH4_3g11550 FvH4_3g11550 FvH4_3g11550 FvH4_3g11550 FvH4_3g11550 FvH4_3g11550
malus_domestica	MD00G1096900.v1.1 MD10G1240800.v1.1
prunus_persica	Prupe.4G102800_v2.0.a1 Prupe.4G102800_v2.0.a1 Prupe.4G102800_v2.0.a1 Prupe.4G102800_v2.0.a1 Prupe.4G102800_v2.0.a1 Prupe.4G102800_v2.0.a1 Prupe.4G102800_v2.0.a1
pyrus_communis	pycom05g24650 pycom05g24660 pycom10g20150
rosa_chinensis	RchiOBHm_Chr5g0018491
rosa_laevigata	RLG00000032371
rosa_multiflora	Rmu_sc0002579.1_g000001 Rmu_sc0004464.1_g000018 Rmu_sc0038967.1_g000001
rosa_roxburghii	Rroxscaffold_1G00059240
rosa_rugosa	Rorug05G0044600 Rorug05G0044700
rosa_samantha	Rh5AG135800 Rh5BG134700 Rh5CG146800 Rh5DG135900
rosa_wichuraiana	Rw5G012030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	968, 2196
AatII	GACGTC	1 cut(s)	997
AccBSI	CCGCTC	1 cut(s)	2153
AciI	CCGC	5 cut(s)	680, 685, 930, 1785, 2151
AclI	AACGTT	1 cut(s)	2289
AclWI	GGATC	9 cut(s)	233, 246, 378, 548, 1139, 1356, 1703, 2142, 2155
AcoI	YGGCCR	1 cut(s)	763
AcsI	RAATTY	6 cut(s)	9, 807, 1441, 1616, 1817, 2224
AcuI	CTGAAG	3 cut(s)	335, 1105, 1908
AcyI	GRCGYC	2 cut(s)	624, 994
AfaI	GTAC	6 cut(s)	323, 893, 1231, 1250, 1648, 1669
AfiI	CCNNNNNNNGG	4 cut(s)	373, 519, 755, 1214
AjuI	GAANNNNNNNTTGG	2 cut(s)	1739, 1771
Alw21I	GWGCWC	2 cut(s)	62, 2080
Alw26I	GTCTC	5 cut(s)	2031, 2211, 2297, 2358, 2378
AlwI	GGATC	9 cut(s)	233, 246, 378, 548, 1139, 1356, 1703, 2142, 2155
AlwNI	CAGNNNCTG	2 cut(s)	701, 1351
Ama87I	CYCGRG	4 cut(s)	264, 639, 1330, 1698
AoxI	GGCC	5 cut(s)	681, 763, 1703, 1782, 1979
ApoI	RAATTY	6 cut(s)	9, 807, 1441, 1616, 1817, 2224
ArsI	GACNNNNNNTTYG	2 cut(s)	1097, 1129
AseI	ATTAAT	2 cut(s)	342, 2142
AspLEI	GCGC	2 cut(s)	1942, 2329
AspS9I	GGNCC	8 cut(s)	415, 487, 682, 1094, 1354, 1703, 1782, 1979
AsuC2I	CCSGG	3 cut(s)	368, 1002, 1544
AsuHPI	GGTGA	3 cut(s)	770, 1092, 1838
AsuII	TTCGAA	1 cut(s)	1553
AsuNHI	GCTAGC	1 cut(s)	2435
AvaI	CYCGRG	4 cut(s)	264, 639, 1330, 1698
AvaII	GGWCC	4 cut(s)	415, 487, 1094, 1354
BaeGI	GKGCMC	1 cut(s)	1805
BalI	TGGCCA	1 cut(s)	765
BamHI	GGATCC	2 cut(s)	238, 2147
BanII	GRGCYC	1 cut(s)	62
BarI	GAAGNNNNNNTAC	2 cut(s)	884, 916
BbsI	GAAGAC	1 cut(s)	1722
Bbv12I	GWGCWC	2 cut(s)	62, 2080
BceAI	ACGGC	4 cut(s)	784, 1034, 1913, 2023
BciVI	GTATCC	1 cut(s)	178
BclI	TGATCA	1 cut(s)	2283
BcnI	CCSGG	3 cut(s)	368, 1002, 1544
BcoDI	GTCTC	5 cut(s)	2031, 2211, 2297, 2358, 2378
BfaI	CTAG	3 cut(s)	2262, 2376, 2436
BfmI	CTRYAG	5 cut(s)	792, 1168, 1375, 1660, 2070
BfuI	GTATCC	1 cut(s)	178
BglII	AGATCT	1 cut(s)	215
BlpI	GCTNAGC	1 cut(s)	1992
BmcAI	AGTACT	1 cut(s)	1669
Bme18I	GGWCC	4 cut(s)	415, 487, 1094, 1354
BmeT110I	CYCGRG	4 cut(s)	264, 639, 1330, 1698
BmgT120I	GGNCC	8 cut(s)	415, 487, 682, 1094, 1354, 1703, 1782, 1979
BmiI	GGNNCC	4 cut(s)	240, 488, 858, 2149
BmsI	GCATC	5 cut(s)	707, 838, 1465, 1536, 1943
BmtI	GCTAGC	1 cut(s)	2439
BoxI	GACNNNNGTC	1 cut(s)	2390
BpiI	GAAGAC	1 cut(s)	1722
BpmI	CTGGAG	4 cut(s)	1230, 2013, 2235, 2341
Bpu10I	CCTNAGC	1 cut(s)	948
Bpu1102I	GCTNAGC	1 cut(s)	1992
Bpu14I	TTCGAA	1 cut(s)	1553
BpuEI	CTTGAG	1 cut(s)	2416
BpuMI	CCSGG	3 cut(s)	368, 1002, 1544
Bsa29I	ATCGAT	1 cut(s)	977
BsaBI	GATNNNNATC	1 cut(s)	505
BsaHI	GRCGYC	2 cut(s)	624, 994
BsaI	GGTCTC	1 cut(s)	2211
BsaXI	ACNNNNNCTCC	6 cut(s)	436, 466, 471, 501, 507, 537
Bsc4I	CCNNNNNNNGG	4 cut(s)	373, 519, 755, 1214
Bse1I	ACTGG	9 cut(s)	550, 602, 812, 1096, 1896, 2023, 2106, 2179, 2257
Bse3DI	GCAATG	6 cut(s)	258, 786, 870, 1272, 1845, 2370
Bse8I	GATNNNNATC	1 cut(s)	505
BseCI	ATCGAT	1 cut(s)	977
BseGI	GGATG	5 cut(s)	54, 79, 858, 958, 1480
BseJI	GATNNNNATC	1 cut(s)	505
BseLI	CCNNNNNNNGG	4 cut(s)	373, 519, 755, 1214
BseMI	GCAATG	6 cut(s)	258, 786, 870, 1272, 1845, 2370
BseMII	CTCAG	5 cut(s)	146, 470, 633, 962, 2006
BseNI	ACTGG	9 cut(s)	550, 602, 812, 1096, 1896, 2023, 2106, 2179, 2257
BseRI	GAGGAG	5 cut(s)	301, 409, 444, 849, 1857
BseSI	GKGCMC	1 cut(s)	1805
BseYI	CCCAGC	1 cut(s)	824
BsgI	GTGCAG	2 cut(s)	1470, 1872
BshFI	GGCC	5 cut(s)	683, 765, 1705, 1784, 1981
BshVI	ATCGAT	1 cut(s)	977
BsiHKAI	GWGCWC	2 cut(s)	62, 2080
BsiHKCI	CYCGRG	4 cut(s)	264, 639, 1330, 1698
BsiSI	CCGG	4 cut(s)	368, 513, 1002, 1544
BslFI	GGGAC	1 cut(s)	1864
BslI	CCNNNNNNNGG	4 cut(s)	373, 519, 755, 1214
BsmAI	GTCTC	5 cut(s)	2031, 2211, 2297, 2358, 2378
BsmFI	GGGAC	1 cut(s)	1864
BsmI	GAATGC	2 cut(s)	201, 1325
BsnI	GGCC	5 cut(s)	683, 765, 1705, 1784, 1981
Bso31I	GGTCTC	1 cut(s)	2211
BsoBI	CYCGRG	4 cut(s)	264, 639, 1330, 1698
Bsp119I	TTCGAA	1 cut(s)	1553
Bsp1286I	GDGCHC	3 cut(s)	62, 1805, 2080
Bsp1407I	TGTACA	3 cut(s)	321, 891, 1248
Bsp1720I	GCTNAGC	1 cut(s)	1992
Bsp19I	CCATGG	2 cut(s)	802, 1127
BspACI	CCGC	5 cut(s)	680, 685, 930, 1785, 2151
BspANI	GGCC	5 cut(s)	683, 765, 1705, 1784, 1981
BspCNI	CTCAG	5 cut(s)	147, 469, 632, 961, 2005
BspDI	ATCGAT	1 cut(s)	977
BspHI	TCATGA	3 cut(s)	271, 1156, 1599
BspLI	GGNNCC	4 cut(s)	240, 488, 858, 2149
BspMAI	CTGCAG	2 cut(s)	796, 1379
BspOI	GCTAGC	1 cut(s)	2439
BspPI	GGATC	9 cut(s)	233, 246, 378, 548, 1139, 1356, 1703, 2142, 2155
BspT104I	TTCGAA	1 cut(s)	1553
BspTNI	GGTCTC	1 cut(s)	2211
BsrBI	CCGCTC	1 cut(s)	2153
BsrDI	GCAATG	6 cut(s)	258, 786, 870, 1272, 1845, 2370
BsrGI	TGTACA	3 cut(s)	321, 891, 1248
BsrI	ACTGG	9 cut(s)	550, 602, 812, 1096, 1896, 2023, 2106, 2179, 2257
BssNI	GRCGYC	2 cut(s)	624, 994
BssT1I	CCWWGG	4 cut(s)	490, 802, 1127, 1186
Bst4CI	ACNGT	6 cut(s)	167, 566, 1141, 1664, 2269, 2281
BstACI	GRCGYC	2 cut(s)	624, 994
BstAPI	GCANNNNNTGC	2 cut(s)	701, 1271
BstAUI	TGTACA	3 cut(s)	321, 891, 1248
BstBI	TTCGAA	1 cut(s)	1553
BstC8I	GCNNGC	6 cut(s)	685, 773, 1272, 1422, 1998, 2437
BstDEI	CTNAG	7 cut(s)	155, 243, 456, 619, 948, 1992, 2273
BstDSI	CCRYGG	5 cut(s)	766, 802, 1127, 1357, 1584
BstF5I	GGATG	5 cut(s)	54, 79, 858, 958, 1480
BstHHI	GCGC	2 cut(s)	1942, 2329
BstMAI	GTCTC	5 cut(s)	2031, 2211, 2297, 2358, 2378
BstMWI	GCNNNNNNNGC	9 cut(s)	134, 701, 788, 906, 1271, 1631, 1883, 1997, 2075
BstNSI	RCATGY	3 cut(s)	845, 1114, 1274
BstPAI	GACNNNNGTC	1 cut(s)	2390
BstSFI	CTRYAG	5 cut(s)	792, 1168, 1375, 1660, 2070
BstSLI	GKGCMC	1 cut(s)	1805
BstV2I	GAAGAC	1 cut(s)	1722
BstX2I	RGATCY	6 cut(s)	215, 238, 1131, 1348, 1708, 2147
BstXI	CCANNNNNNTGG	2 cut(s)	497, 1033
BstYI	RGATCY	6 cut(s)	215, 238, 1131, 1348, 1708, 2147
Bsu15I	ATCGAT	1 cut(s)	977
BsuI	GTATCC	1 cut(s)	178
BsuRI	GGCC	5 cut(s)	683, 765, 1705, 1784, 1981
BsuTUI	ATCGAT	1 cut(s)	977
BtgI	CCRYGG	5 cut(s)	766, 802, 1127, 1357, 1584
BtsCI	GGATG	5 cut(s)	54, 79, 858, 958, 1480
BtsI	GCAGTG	2 cut(s)	777, 2059
BtsIMutI	CAGTG	6 cut(s)	777, 819, 1137, 1889, 2059, 2172
Cac8I	GCNNGC	6 cut(s)	685, 773, 1272, 1422, 1998, 2437
CaiI	CAGNNNCTG	2 cut(s)	701, 1351
CciI	TCATGA	3 cut(s)	271, 1156, 1599
CfoI	GCGC	2 cut(s)	1942, 2329
Cfr13I	GGNCC	8 cut(s)	415, 487, 682, 1094, 1354, 1703, 1782, 1979
ClaI	ATCGAT	1 cut(s)	977
CseI	GACGC	1 cut(s)	613
CsiI	ACCWGGT	1 cut(s)	1225
Csp6I	GTAC	6 cut(s)	322, 892, 1230, 1249, 1647, 1668
CspCI	CAANNNNNGTGG	2 cut(s)	1957, 1992
CviQI	GTAC	6 cut(s)	322, 892, 1230, 1249, 1647, 1668
DdeI	CTNAG	7 cut(s)	155, 243, 456, 619, 948, 1992, 2273
DraI	TTTAAA	1 cut(s)	505
EaeI	YGGCCR	1 cut(s)	763
Ecl136II	GAGCTC	1 cut(s)	60
Eco130I	CCWWGG	4 cut(s)	490, 802, 1127, 1186
Eco24I	GRGCYC	1 cut(s)	62
Eco31I	GGTCTC	1 cut(s)	2211
Eco32I	GATATC	1 cut(s)	1597
Eco47I	GGWCC	4 cut(s)	415, 487, 1094, 1354
Eco53kI	GAGCTC	1 cut(s)	60
Eco57I	CTGAAG	3 cut(s)	335, 1105, 1908
Eco88I	CYCGRG	4 cut(s)	264, 639, 1330, 1698
EcoICRI	GAGCTC	1 cut(s)	60
EcoRI	GAATTC	1 cut(s)	807
EcoRV	GATATC	1 cut(s)	1597
EcoT14I	CCWWGG	4 cut(s)	490, 802, 1127, 1186
EcoT22I	ATGCAT	1 cut(s)	1272
EcoT38I	GRGCYC	1 cut(s)	62
ErhI	CCWWGG	4 cut(s)	490, 802, 1127, 1186
FaqI	GGGAC	1 cut(s)	1864
FauI	CCCGC	1 cut(s)	692
FbaI	TGATCA	1 cut(s)	2283
FokI	GGATG	5 cut(s)	61, 86, 865, 965, 1487
FriOI	GRGCYC	1 cut(s)	62
FspBI	CTAG	3 cut(s)	2262, 2376, 2436
GlaI	GCGC	2 cut(s)	1941, 2328
GsaI	CCCAGC	1 cut(s)	828
GsuI	CTGGAG	4 cut(s)	1230, 2013, 2235, 2341
HaeIII	GGCC	5 cut(s)	683, 765, 1705, 1784, 1981
HapII	CCGG	4 cut(s)	368, 513, 1002, 1544
HgaI	GACGC	1 cut(s)	613
HhaI	GCGC	2 cut(s)	1942, 2329
Hin1I	GRCGYC	2 cut(s)	624, 994
Hin6I	GCGC	2 cut(s)	1940, 2327
HinP1I	GCGC	2 cut(s)	1940, 2327
HincII	GTYRAC	2 cut(s)	961, 2482
HindII	GTYRAC	2 cut(s)	961, 2482
HindIII	AAGCTT	4 cut(s)	383, 671, 898, 970
HinfI	GANTC	5 cut(s)	275, 1328, 1550, 1808, 2102
HpaII	CCGG	4 cut(s)	368, 513, 1002, 1544
HphI	GGTGA	3 cut(s)	770, 1092, 1838
Hpy166II	GTNNAC	7 cut(s)	470, 880, 961, 1232, 1251, 1410, 2482
Hpy188I	TCNGA	4 cut(s)	315, 905, 2181, 2336
Hpy8I	GTNNAC	7 cut(s)	470, 880, 961, 1232, 1251, 1410, 2482
HpyAV	CCTTC	5 cut(s)	512, 1129, 1549, 1932, 2439
HpyCH4III	ACNGT	6 cut(s)	167, 566, 1141, 1664, 2269, 2281
HpyCH4IV	ACGT	2 cut(s)	994, 2289
HpyF10VI	GCNNNNNNNGC	9 cut(s)	134, 701, 788, 906, 1271, 1631, 1883, 1997, 2075
HpyF3I	CTNAG	7 cut(s)	155, 243, 456, 619, 948, 1992, 2273
HpySE526I	ACGT	2 cut(s)	994, 2289
Hsp92I	GRCGYC	2 cut(s)	624, 994
HspAI	GCGC	2 cut(s)	1940, 2327
Ksp22I	TGATCA	1 cut(s)	2283
LmnI	GCTCC	7 cut(s)	133, 479, 862, 1768, 1870, 2075, 2158
LweI	GCATC	5 cut(s)	707, 838, 1465, 1536, 1943
MabI	ACCWGGT	1 cut(s)	1225
MaeI	CTAG	3 cut(s)	2262, 2376, 2436
MaeII	ACGT	2 cut(s)	994, 2289
MaeIII	GTNAC	6 cut(s)	33, 112, 361, 634, 1198, 1294
MbiI	CCGCTC	1 cut(s)	2153
MboII	GAAGA	6 cut(s)	18, 1126, 1530, 1615, 1727, 2398
MflI	RGATCY	6 cut(s)	215, 238, 1131, 1348, 1708, 2147
MhlI	GDGCHC	3 cut(s)	62, 1805, 2080
MlsI	TGGCCA	1 cut(s)	765
MluNI	TGGCCA	1 cut(s)	765
MlyI	GAGTC	2 cut(s)	1322, 1802
MmeI	TCCRAC	2 cut(s)	581, 1195
Mox20I	TGGCCA	1 cut(s)	765
Mph1103I	ATGCAT	1 cut(s)	1272
MscI	TGGCCA	1 cut(s)	765
MseI	TTAA	9 cut(s)	120, 342, 378, 504, 1020, 1445, 1896, 2142, 2529
MslI	CAYNNNNRTG	2 cut(s)	846, 1031
Msp20I	TGGCCA	1 cut(s)	765
MspA1I	CMGCKG	1 cut(s)	2432
MspI	CCGG	4 cut(s)	368, 513, 1002, 1544
Mva1269I	GAATGC	2 cut(s)	201, 1325
MwoI	GCNNNNNNNGC	9 cut(s)	134, 701, 788, 906, 1271, 1631, 1883, 1997, 2075
NciI	CCSGG	3 cut(s)	368, 1002, 1544
NcoI	CCATGG	2 cut(s)	802, 1127
NheI	GCTAGC	1 cut(s)	2435
NlaIV	GGNNCC	4 cut(s)	240, 488, 858, 2149
NmuCI	GTSAC	2 cut(s)	112, 1198
NsiI	ATGCAT	1 cut(s)	1272
NspI	RCATGY	3 cut(s)	845, 1114, 1274
NspV	TTCGAA	1 cut(s)	1553
PaeI	GCATGC	1 cut(s)	1274
PaeR7I	CTCGAG	4 cut(s)	264, 639, 1330, 1698
PagI	TCATGA	3 cut(s)	271, 1156, 1599
PctI	GAATGC	2 cut(s)	201, 1325
PfeI	GAWTC	3 cut(s)	275, 1550, 2102
PfoI	TCCNGGA	5 cut(s)	389, 417, 1000, 1207, 2086
PleI	GAGTC	2 cut(s)	1322, 1802
PpsI	GAGTC	2 cut(s)	1322, 1802
PshAI	GACNNNNGTC	1 cut(s)	2390
PshBI	ATTAAT	2 cut(s)	342, 2142
PsiI	TTATAA	2 cut(s)	968, 2196
Psp124BI	GAGCTC	1 cut(s)	62
Psp1406I	AACGTT	1 cut(s)	2289
PspFI	CCCAGC	1 cut(s)	824
PspN4I	GGNNCC	4 cut(s)	240, 488, 858, 2149
PspPI	GGNCC	8 cut(s)	415, 487, 682, 1094, 1354, 1703, 1782, 1979
PspXI	VCTCGAGB	3 cut(s)	264, 1330, 1698
PstI	CTGCAG	2 cut(s)	796, 1379
PstNI	CAGNNNCTG	2 cut(s)	701, 1351
PsuI	RGATCY	6 cut(s)	215, 238, 1131, 1348, 1708, 2147
PvuII	CAGCTG	1 cut(s)	2432
RsaI	GTAC	6 cut(s)	323, 893, 1231, 1250, 1648, 1669
RsaNI	GTAC	6 cut(s)	322, 892, 1230, 1249, 1647, 1668
RseI	CAYNNNNRTG	2 cut(s)	846, 1031
SacI	GAGCTC	1 cut(s)	62
SaqAI	TTAA	9 cut(s)	120, 342, 378, 504, 1020, 1445, 1896, 2142, 2529
Sau96I	GGNCC	8 cut(s)	415, 487, 682, 1094, 1354, 1703, 1782, 1979
ScaI	AGTACT	1 cut(s)	1669
SchI	GAGTC	2 cut(s)	1322, 1802
SduI	GDGCHC	3 cut(s)	62, 1805, 2080
SexAI	ACCWGGT	1 cut(s)	1225
SfaNI	GCATC	5 cut(s)	707, 838, 1465, 1536, 1943
SfcI	CTRYAG	5 cut(s)	792, 1168, 1375, 1660, 2070
Sfr274I	CTCGAG	4 cut(s)	264, 639, 1330, 1698
SfuI	TTCGAA	1 cut(s)	1553
SinI	GGWCC	4 cut(s)	415, 487, 1094, 1354
SlaI	CTCGAG	4 cut(s)	264, 639, 1330, 1698
SmiI	ATTTAAAT	1 cut(s)	505
SmiMI	CAYNNNNRTG	2 cut(s)	846, 1031
SmlI	CTYRAG	5 cut(s)	264, 639, 1330, 1698, 2395
SmoI	CTYRAG	5 cut(s)	264, 639, 1330, 1698, 2395
SphI	GCATGC	1 cut(s)	1274
SsiI	CCGC	5 cut(s)	680, 685, 930, 1785, 2151
SspI	AATATT	1 cut(s)	226
SspMI	CTAG	3 cut(s)	2262, 2376, 2436
SstI	GAGCTC	1 cut(s)	62
StyI	CCWWGG	4 cut(s)	490, 802, 1127, 1186
SwaI	ATTTAAAT	1 cut(s)	505
TaaI	ACNGT	6 cut(s)	167, 566, 1141, 1664, 2269, 2281
TaiI	ACGT	2 cut(s)	997, 2292
TaqI	TCGA	8 cut(s)	265, 640, 862, 977, 1331, 1390, 1553, 1699
TatI	WGTACW	4 cut(s)	321, 891, 1248, 1667
TauI	GCSGC	3 cut(s)	683, 932, 1787
TfiI	GAWTC	3 cut(s)	275, 1550, 2102
Tru1I	TTAA	9 cut(s)	120, 342, 378, 504, 1020, 1445, 1896, 2142, 2529
Tru9I	TTAA	9 cut(s)	120, 342, 378, 504, 1020, 1445, 1896, 2142, 2529
TscAI	CASTG	6 cut(s)	784, 819, 1144, 1896, 2059, 2179
TseFI	GTSAC	2 cut(s)	112, 1198
Tsp45I	GTSAC	2 cut(s)	112, 1198
TspDTI	ATGAA	7 cut(s)	260, 267, 573, 648, 1529, 1616, 1760
TspGWI	ACGGA	3 cut(s)	251, 1346, 1573
TspRI	CASTG	6 cut(s)	784, 819, 1144, 1896, 2059, 2179
VpaK11BI	GGWCC	4 cut(s)	415, 487, 1094, 1354
VspI	ATTAAT	2 cut(s)	342, 2142
XapI	RAATTY	6 cut(s)	9, 807, 1441, 1616, 1817, 2224
XbaI	TCTAGA	1 cut(s)	2261
XceI	RCATGY	3 cut(s)	845, 1114, 1274
XcmI	CCANNNNNNNNNTGG	1 cut(s)	480
XhoI	CTCGAG	4 cut(s)	264, 639, 1330, 1698
XspI	CTAG	3 cut(s)	2262, 2376, 2436
ZraI	GACGTC	1 cut(s)	995
ZrmI	AGTACT	1 cut(s)	1669
Zsp2I	ATGCAT	1 cut(s)	1272

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.