Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0002994

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG146800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2541 bp

ATGGGAAGAATTTATGGGGTGCATTTGGTGGTGTTACTTGTTTTGGGGATGGTTGTGAGCTCTTGGTGTCAGGATAATGATGATTATGATAACATCTCTGCTGTGTATATTGTCACTCTTAAACAAGCTCCTGTTGCTCATTACTTGGCTGACCTGAGAAAGAACAGTCAAGGTCTGAATGGGGATACTGAGAGGTTGAGCATTCACAAACCAAGATCTATAAATATTTCGAGGACGGATCCTAAGTATGCCTCATACATTGCTCGAGTTCATGATTCATTATTGAGGAGGGCGTTGAAAGGGGAGAAATATCTGAAGCTGTACAGCTACCACTACTTGATTAATGGGTTTGCTGTGCTTGTTACCCCGGATCAGGTTAATAAGCTTTCCAGGAGGAGAGAAGTAGCAAATGTGGTCCTAGATTTCTCTGTTAGAACTGCAACAACCCATACTCCTCAGTTCTTGGGTTTACCACAAGGAGCATGGGTGCAAGGAGGTGGATTTAAATCAGCCGGAGAAGGGGTTGTGATTGGATTTATTGATACTGGCATTGATCCAACACACAGTAGTTTTGCTGATAATTCATCTAAAAATCCATATCCAGTTCCAGTTCATTTCTCAGGTGTCTGTGAGGTTACTCGAGATTTTCCATCTGGTTCATGCAATAGGAAGCTTATAGCGGCCCGCCATTTTGCAGCATCTGCTATAACCAGGGGTGTTTTCAATATATCCCAGGACTATGCTTCTCCTTTTGATGGTGATGGCCACGGCACGCACACTGCTTCCATTGCTGCAGGAAACCATGGAATTCCAGTGGTTGTCGCTGGGCATCATTTTGGACATGCAAGTGGGATGGCTCCTCGATCACACATTGCTGTTTACAAGGCATTGTACAAAAGCTTTGGAGGCTTTGCTGCTGATGTTGTTGCCGCAATAGACCAGGCTGCTCAGGATGGGGTTGACATTATAAGCTTATCAATCACTCCCAATAGACGTCCTCCCGGAGTTGCAACATTTTTCAACCCCATAGATATGGCAACACTATCAGCCGTAAAGGTTGGTATATTTGTTGTCCAAGCAGCAGGAAATACTGGACCATCACCAAAAAGCATGTCTTCGTTCAGTCCATGGATCTTCACTGTTGGTTCTGCTTCTCATGACAGAACCTACAGCAACTCTATAACCCTTGGCAACAATGTGACCATTCCTGGAGTTGGACTTGCACCTGGTACACATAATGATACAATGTACACGCTGATTTCTGCAATGCATGCTTTGAATAATGACACAACAGTTACAGATGATATGTATGTAAGTGAATGCCAAGACTCAAGCAACTTCAATCAGGATCTGGTCCGGGGAAACCTCTTGATCTGCAGCTACTCAATTCGATTTGTGCTTGGAATGTCCACAATACAGCAAGCCATACAAACAGCGCAAAATTTAAGTGCAGTTGGTGTTGTTTTTTATATGGATGCTTTTGTGATTGGTTATCAGCTCAACCCAACTCCAATGAAAATACCTGGCATCATAATTTCTTCCCCGGAGGATTCCAAGGCTTTTATCCAATACTACAATCATTCCGTGGAGAGAGATATCATGACGAAGAAAATTATCAAATTTGGGGCAGTTGCAGCCATTTGTGGTGGTACAAAAGCGAACTACAGTAGTACTTCTCCAAAGATCATGTATTACTCTGCTCGAGGGCCAGATCCAGAAGACAATTCTCTTGATATTGCAGACATAATGAAACCCAATTTGGTAGCTCCTGGAAACTCTATATGGGCCGCTTGGAGTTCTTTGGGCACAGACTCAGTTGAATTTCAAGGTGAGAGCTTTGCAATGATGTCTGGGACAAGCATGGCTGCTCCTCATGTTGCTGGTCTTGCTGCACTGGTTAAGCAGAAGTTTCCCAATTTCAGTCCTTCAGCCGTTGCATCTGCACTTTCAACAACGGCTTCTCTATATGACAAGTCTGGTGGGCCAATAATGGCTCAGCGTGCTTATGCCTTTCCAGATCAAAACCAGTCTCCAGCAACGCCGTTTGACATGGGCAGTGGTTTTGTAAATGCTACAGGAGCACTAAATCCGGGATTGATTTTTGATTCCAGTTATGGCAATTATATGTCATTTCTTTGTGGCATTAATGGATCCGCTCCTGTGGTTTTGAATTACACTGGTCAGAGCTGTTGGCTTTATAACTCTACCATCAATGCCGGAGACCTGAATTTACCATCAATAACAATAGCAAACCTCAACCAGTCTAGAACTGTTCTAAGAACCGTGATCAACGTTGCTGGAAATGAGACTTATAGTATAGGCTGGAGTGCGCCTTTCGGAGTTTCGCTAAAAGTGTCTCCATCACATTTTTACATTGCTAGTGGGGAGACACAGGTCTTGAGTGTATTCTTCAATGCTACGAGCAACAACACAGCTGCTAGCTATGGAAGGATAGGACTATTTGGAAATCAAGGTCATGTTGTCAACATTCCTTTGTCTGTCATTGTCAAAATCACATATAATACTACCATTAACAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 Peptidase_S8

Protein Analysis

846

Amino Acids

90.44

Weight (kDa)

7.67

Isoelectric Point (pI)

37.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	35 - 146	4.4e-13	Peptidase inhibitor I9
Peptidase_S8	PF00082	172 - 666	2.4e-46	Subtilase family
fn3_6	PF17766	741 - 834	2.8e-15	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002994)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30600 AT4G20430 AT4G20430 AT4G20430 AT5G44530 AT5G44530 AT5G44530
fragaria_vesca	FvH4_3g11550 FvH4_3g11550 FvH4_3g11550 FvH4_3g11550 FvH4_3g11550 FvH4_3g11550
malus_domestica	MD00G1096900.v1.1 MD10G1240800.v1.1
prunus_persica	Prupe.4G102800_v2.0.a1 Prupe.4G102800_v2.0.a1 Prupe.4G102800_v2.0.a1 Prupe.4G102800_v2.0.a1 Prupe.4G102800_v2.0.a1 Prupe.4G102800_v2.0.a1 Prupe.4G102800_v2.0.a1
pyrus_communis	pycom05g24650 pycom05g24660 pycom10g20150
rosa_chinensis	RchiOBHm_Chr5g0018491
rosa_laevigata	RLG00000032371
rosa_multiflora	Rmu_sc0002579.1_g000001 Rmu_sc0004464.1_g000018 Rmu_sc0038967.1_g000001
rosa_roxburghii	Rroxscaffold_1G00059240
rosa_rugosa	Rorug05G0044600 Rorug05G0044700
rosa_samantha	Rh5AG135800 Rh5BG134700 Rh5CG146800 Rh5DG135900
rosa_wichuraiana	Rw5G012030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	968, 2199
AatII	GACGTC	1 cut(s)	997
AccBSI	CCGCTC	1 cut(s)	2156
AciI	CCGC	5 cut(s)	680, 685, 930, 1788, 2154
AclI	AACGTT	1 cut(s)	2292
AclWI	GGATC	9 cut(s)	233, 246, 378, 548, 1139, 1356, 1706, 2145, 2158
AcoI	YGGCCR	1 cut(s)	763
AcsI	RAATTY	6 cut(s)	9, 807, 1441, 1619, 1820, 2227
AcuI	CTGAAG	2 cut(s)	335, 1911
AcyI	GRCGYC	1 cut(s)	994
AfaI	GTAC	6 cut(s)	323, 893, 1231, 1250, 1651, 1672
AfiI	CCNNNNNNNGG	4 cut(s)	373, 519, 755, 1214
AjnI	CCWGG	8 cut(s)	389, 710, 732, 939, 1207, 1225, 1522, 1768
AjuI	GAANNNNNNNTTGG	2 cut(s)	1742, 1774
Alw21I	GWGCWC	2 cut(s)	62, 2083
Alw26I	GTCTC	5 cut(s)	2034, 2214, 2300, 2361, 2381
AlwI	GGATC	9 cut(s)	233, 246, 378, 548, 1139, 1356, 1706, 2145, 2158
AlwNI	CAGNNNCTG	2 cut(s)	701, 1351
Ama87I	CYCGRG	3 cut(s)	264, 639, 1701
AoxI	GGCC	5 cut(s)	681, 763, 1706, 1785, 1982
ApoI	RAATTY	6 cut(s)	9, 807, 1441, 1619, 1820, 2227
ArsI	GACNNNNNNTTYG	2 cut(s)	1097, 1129
AseI	ATTAAT	2 cut(s)	342, 2145
AspLEI	GCGC	2 cut(s)	1438, 2332
AspS9I	GGNCC	7 cut(s)	415, 682, 1094, 1354, 1706, 1785, 1982
AsuC2I	CCSGG	5 cut(s)	368, 1002, 1358, 1544, 2091
AsuHPI	GGTGA	3 cut(s)	770, 1092, 1841
AsuNHI	GCTAGC	1 cut(s)	2438
AvaI	CYCGRG	3 cut(s)	264, 639, 1701
AvaII	GGWCC	3 cut(s)	415, 1094, 1354
BaeGI	GKGCMC	1 cut(s)	1808
BalI	TGGCCA	1 cut(s)	765
BamHI	GGATCC	2 cut(s)	238, 2150
BanII	GRGCYC	1 cut(s)	62
BbsI	GAAGAC	2 cut(s)	1107, 1725
Bbv12I	GWGCWC	2 cut(s)	62, 2083
BceAI	ACGGC	5 cut(s)	784, 1034, 1916, 1971, 2026
BciT130I	CCWGG	8 cut(s)	391, 712, 734, 941, 1209, 1227, 1524, 1770
BciVI	GTATCC	1 cut(s)	178
BclI	TGATCA	1 cut(s)	2286
BcnI	CCSGG	5 cut(s)	368, 1002, 1358, 1544, 2091
BcoDI	GTCTC	5 cut(s)	2034, 2214, 2300, 2361, 2381
BfaI	CTAG	4 cut(s)	419, 2265, 2379, 2439
BfmI	CTRYAG	5 cut(s)	792, 1168, 1375, 1663, 2073
BfuI	GTATCC	1 cut(s)	178
BglII	AGATCT	1 cut(s)	215
BlpI	GCTNAGC	1 cut(s)	1995
BmcAI	AGTACT	1 cut(s)	1672
Bme18I	GGWCC	3 cut(s)	415, 1094, 1354
BmeT110I	CYCGRG	3 cut(s)	264, 639, 1701
BmgT120I	GGNCC	7 cut(s)	415, 682, 1094, 1354, 1706, 1785, 1982
BmiI	GGNNCC	3 cut(s)	240, 858, 2152
BmsI	GCATC	5 cut(s)	707, 838, 1465, 1536, 1946
BmtI	GCTAGC	1 cut(s)	2442
BoxI	GACNNNNGTC	1 cut(s)	2393
BpiI	GAAGAC	2 cut(s)	1107, 1725
BpmI	CTGGAG	3 cut(s)	1230, 2016, 2344
Bpu10I	CCTNAGC	1 cut(s)	948
Bpu1102I	GCTNAGC	1 cut(s)	1995
BpuEI	CTTGAG	2 cut(s)	1315, 2419
BpuMI	CCSGG	5 cut(s)	368, 1002, 1358, 1544, 2091
BsaBI	GATNNNNATC	1 cut(s)	505
BsaHI	GRCGYC	1 cut(s)	994
BsaI	GGTCTC	1 cut(s)	2214
BsaXI	ACNNNNNCTCC	6 cut(s)	436, 466, 471, 501, 507, 537
Bsc4I	CCNNNNNNNGG	4 cut(s)	373, 519, 755, 1214
Bse3DI	GCAATG	6 cut(s)	258, 786, 870, 1272, 1848, 2373
Bse8I	GATNNNNATC	1 cut(s)	505
BseBI	CCWGG	8 cut(s)	391, 712, 734, 941, 1209, 1227, 1524, 1770
BseGI	GGATG	4 cut(s)	54, 858, 958, 1480
BseJI	GATNNNNATC	1 cut(s)	505
BseLI	CCNNNNNNNGG	4 cut(s)	373, 519, 755, 1214
BseMI	GCAATG	6 cut(s)	258, 786, 870, 1272, 1848, 2373
BseMII	CTCAG	7 cut(s)	146, 180, 470, 633, 962, 1827, 2009
BseRI	GAGGAG	5 cut(s)	301, 409, 444, 849, 1860
BseSI	GKGCMC	1 cut(s)	1808
BseYI	CCCAGC	1 cut(s)	824
BsgI	GTGCAG	3 cut(s)	1470, 1875, 1926
BshFI	GGCC	5 cut(s)	683, 765, 1708, 1787, 1984
BsiHKAI	GWGCWC	2 cut(s)	62, 2083
BsiHKCI	CYCGRG	3 cut(s)	264, 639, 1701
BsiSI	CCGG	7 cut(s)	368, 513, 1002, 1357, 1544, 2090, 2217
BslFI	GGGAC	1 cut(s)	1867
BslI	CCNNNNNNNGG	4 cut(s)	373, 519, 755, 1214
BsmAI	GTCTC	5 cut(s)	2034, 2214, 2300, 2361, 2381
BsmFI	GGGAC	1 cut(s)	1867
BsmI	GAATGC	2 cut(s)	201, 1325
BsnI	GGCC	5 cut(s)	683, 765, 1708, 1787, 1984
Bso31I	GGTCTC	1 cut(s)	2214
BsoBI	CYCGRG	3 cut(s)	264, 639, 1701
Bsp1286I	GDGCHC	3 cut(s)	62, 1808, 2083
Bsp1407I	TGTACA	3 cut(s)	321, 891, 1248
Bsp1720I	GCTNAGC	1 cut(s)	1995
Bsp19I	CCATGG	2 cut(s)	802, 1127
BspACI	CCGC	5 cut(s)	680, 685, 930, 1788, 2154
BspANI	GGCC	5 cut(s)	683, 765, 1708, 1787, 1984
BspCNI	CTCAG	7 cut(s)	147, 181, 469, 632, 961, 1826, 2008
BspHI	TCATGA	3 cut(s)	271, 1156, 1599
BspLI	GGNNCC	3 cut(s)	240, 858, 2152
BspMAI	CTGCAG	2 cut(s)	796, 1379
BspOI	GCTAGC	1 cut(s)	2442
BspPI	GGATC	9 cut(s)	233, 246, 378, 548, 1139, 1356, 1706, 2145, 2158
BspTNI	GGTCTC	1 cut(s)	2214
BsrBI	CCGCTC	1 cut(s)	2156
BsrDI	GCAATG	6 cut(s)	258, 786, 870, 1272, 1848, 2373
BsrGI	TGTACA	3 cut(s)	321, 891, 1248
BssNI	GRCGYC	1 cut(s)	994
BssT1I	CCWWGG	4 cut(s)	802, 1127, 1186, 1554
Bst2UI	CCWGG	8 cut(s)	391, 712, 734, 941, 1209, 1227, 1524, 1770
Bst4CI	ACNGT	7 cut(s)	167, 566, 1141, 1294, 1667, 2272, 2284
BstACI	GRCGYC	1 cut(s)	994
BstAPI	GCANNNNNTGC	2 cut(s)	701, 1271
BstAUI	TGTACA	3 cut(s)	321, 891, 1248
BstC8I	GCNNGC	6 cut(s)	685, 773, 1272, 1422, 2001, 2440
BstDEI	CTNAG	9 cut(s)	155, 189, 243, 456, 619, 948, 1813, 1995, 2276
BstDSI	CCRYGG	4 cut(s)	766, 802, 1127, 1584
BstF5I	GGATG	4 cut(s)	54, 858, 958, 1480
BstHHI	GCGC	2 cut(s)	1438, 2332
BstMAI	GTCTC	5 cut(s)	2034, 2214, 2300, 2361, 2381
BstMWI	GCNNNNNNNGC	9 cut(s)	134, 701, 788, 906, 1271, 1634, 1886, 2000, 2078
BstNI	CCWGG	8 cut(s)	391, 712, 734, 941, 1209, 1227, 1524, 1770
BstNSI	RCATGY	3 cut(s)	845, 1114, 1274
BstPAI	GACNNNNGTC	1 cut(s)	2393
BstSFI	CTRYAG	5 cut(s)	792, 1168, 1375, 1663, 2073
BstSLI	GKGCMC	1 cut(s)	1808
BstV2I	GAAGAC	2 cut(s)	1107, 1725
BstX2I	RGATCY	6 cut(s)	215, 238, 1131, 1348, 1711, 2150
BstXI	CCANNNNNNTGG	1 cut(s)	1033
BstYI	RGATCY	6 cut(s)	215, 238, 1131, 1348, 1711, 2150
BsuI	GTATCC	1 cut(s)	178
BsuRI	GGCC	5 cut(s)	683, 765, 1708, 1787, 1984
BtgI	CCRYGG	4 cut(s)	766, 802, 1127, 1584
BtsCI	GGATG	4 cut(s)	54, 858, 958, 1480
BtsI	GCAGTG	2 cut(s)	777, 2062
BtsIMutI	CAGTG	6 cut(s)	777, 819, 1137, 1892, 2062, 2175
Cac8I	GCNNGC	6 cut(s)	685, 773, 1272, 1422, 2001, 2440
CaiI	CAGNNNCTG	2 cut(s)	701, 1351
CciI	TCATGA	3 cut(s)	271, 1156, 1599
CfoI	GCGC	2 cut(s)	1438, 2332
Cfr13I	GGNCC	7 cut(s)	415, 682, 1094, 1354, 1706, 1785, 1982
CsiI	ACCWGGT	1 cut(s)	1225
Csp6I	GTAC	6 cut(s)	322, 892, 1230, 1249, 1650, 1671
CspCI	CAANNNNNGTGG	2 cut(s)	1960, 1995
CviQI	GTAC	6 cut(s)	322, 892, 1230, 1249, 1650, 1671
DdeI	CTNAG	9 cut(s)	155, 189, 243, 456, 619, 948, 1813, 1995, 2276
DraI	TTTAAA	1 cut(s)	505
EaeI	YGGCCR	1 cut(s)	763
Ecl136II	GAGCTC	1 cut(s)	60
Eco130I	CCWWGG	4 cut(s)	802, 1127, 1186, 1554
Eco24I	GRGCYC	1 cut(s)	62
Eco31I	GGTCTC	1 cut(s)	2214
Eco32I	GATATC	1 cut(s)	1597
Eco47I	GGWCC	3 cut(s)	415, 1094, 1354
Eco53kI	GAGCTC	1 cut(s)	60
Eco57I	CTGAAG	2 cut(s)	335, 1911
Eco88I	CYCGRG	3 cut(s)	264, 639, 1701
EcoICRI	GAGCTC	1 cut(s)	60
EcoRI	GAATTC	1 cut(s)	807
EcoRII	CCWGG	8 cut(s)	389, 710, 732, 939, 1207, 1225, 1522, 1768
EcoRV	GATATC	1 cut(s)	1597
EcoT14I	CCWWGG	4 cut(s)	802, 1127, 1186, 1554
EcoT22I	ATGCAT	1 cut(s)	1272
EcoT38I	GRGCYC	1 cut(s)	62
ErhI	CCWWGG	4 cut(s)	802, 1127, 1186, 1554
FalI	AAGNNNNNCTT	2 cut(s)	1099, 1131
FaqI	GGGAC	1 cut(s)	1867
FauI	CCCGC	1 cut(s)	692
FbaI	TGATCA	1 cut(s)	2286
FokI	GGATG	4 cut(s)	61, 865, 965, 1487
FriOI	GRGCYC	1 cut(s)	62
FspBI	CTAG	4 cut(s)	419, 2265, 2379, 2439
GlaI	GCGC	2 cut(s)	1437, 2331
GsaI	CCCAGC	1 cut(s)	828
GsuI	CTGGAG	3 cut(s)	1230, 2016, 2344
HaeIII	GGCC	5 cut(s)	683, 765, 1708, 1787, 1984
HapII	CCGG	7 cut(s)	368, 513, 1002, 1357, 1544, 2090, 2217
HhaI	GCGC	2 cut(s)	1438, 2332
Hin1I	GRCGYC	1 cut(s)	994
Hin6I	GCGC	2 cut(s)	1436, 2330
HinP1I	GCGC	2 cut(s)	1436, 2330
HincII	GTYRAC	2 cut(s)	961, 2485
HindII	GTYRAC	2 cut(s)	961, 2485
HindIII	AAGCTT	4 cut(s)	383, 671, 898, 970
HinfI	GANTC	5 cut(s)	275, 1328, 1550, 1811, 2105
HpaII	CCGG	7 cut(s)	368, 513, 1002, 1357, 1544, 2090, 2217
HphI	GGTGA	3 cut(s)	770, 1092, 1841
Hpy166II	GTNNAC	7 cut(s)	470, 880, 961, 1232, 1251, 1410, 2485
Hpy188I	TCNGA	4 cut(s)	177, 315, 2184, 2339
Hpy8I	GTNNAC	7 cut(s)	470, 880, 961, 1232, 1251, 1410, 2485
HpyAV	CCTTC	3 cut(s)	512, 1935, 2442
HpyCH4III	ACNGT	7 cut(s)	167, 566, 1141, 1294, 1667, 2272, 2284
HpyCH4IV	ACGT	2 cut(s)	994, 2292
HpyF10VI	GCNNNNNNNGC	9 cut(s)	134, 701, 788, 906, 1271, 1634, 1886, 2000, 2078
HpyF3I	CTNAG	9 cut(s)	155, 189, 243, 456, 619, 948, 1813, 1995, 2276
HpySE526I	ACGT	2 cut(s)	994, 2292
Hsp92I	GRCGYC	1 cut(s)	994
HspAI	GCGC	2 cut(s)	1436, 2330
Ksp22I	TGATCA	1 cut(s)	2286
LmnI	GCTCC	7 cut(s)	133, 479, 862, 1771, 1873, 2078, 2161
LweI	GCATC	5 cut(s)	707, 838, 1465, 1536, 1946
MabI	ACCWGGT	1 cut(s)	1225
MaeI	CTAG	4 cut(s)	419, 2265, 2379, 2439
MaeII	ACGT	2 cut(s)	994, 2292
MaeIII	GTNAC	6 cut(s)	33, 112, 361, 634, 1198, 1294
MbiI	CCGCTC	1 cut(s)	2156
MboII	GAAGA	7 cut(s)	18, 1107, 1126, 1530, 1618, 1730, 2401
MflI	RGATCY	6 cut(s)	215, 238, 1131, 1348, 1711, 2150
MhlI	GDGCHC	3 cut(s)	62, 1808, 2083
MlsI	TGGCCA	1 cut(s)	765
MluNI	TGGCCA	1 cut(s)	765
MlyI	GAGTC	2 cut(s)	1322, 1805
MmeI	TCCRAC	2 cut(s)	581, 1195
Mox20I	TGGCCA	1 cut(s)	765
Mph1103I	ATGCAT	1 cut(s)	1272
MscI	TGGCCA	1 cut(s)	765
MseI	TTAA	8 cut(s)	120, 342, 378, 504, 1445, 1899, 2145, 2532
MslI	CAYNNNNRTG	2 cut(s)	846, 1031
Msp20I	TGGCCA	1 cut(s)	765
MspA1I	CMGCKG	1 cut(s)	2435
MspI	CCGG	7 cut(s)	368, 513, 1002, 1357, 1544, 2090, 2217
Mva1269I	GAATGC	2 cut(s)	201, 1325
MvaI	CCWGG	8 cut(s)	391, 712, 734, 941, 1209, 1227, 1524, 1770
MwoI	GCNNNNNNNGC	9 cut(s)	134, 701, 788, 906, 1271, 1634, 1886, 2000, 2078
NciI	CCSGG	5 cut(s)	368, 1002, 1358, 1544, 2091
NcoI	CCATGG	2 cut(s)	802, 1127
NheI	GCTAGC	1 cut(s)	2438
NlaIV	GGNNCC	3 cut(s)	240, 858, 2152
NmuCI	GTSAC	2 cut(s)	112, 1198
NsiI	ATGCAT	1 cut(s)	1272
NspI	RCATGY	3 cut(s)	845, 1114, 1274
PaeI	GCATGC	1 cut(s)	1274
PaeR7I	CTCGAG	3 cut(s)	264, 639, 1701
PagI	TCATGA	3 cut(s)	271, 1156, 1599
PctI	GAATGC	2 cut(s)	201, 1325
PfeI	GAWTC	3 cut(s)	275, 1550, 2105
PfoI	TCCNGGA	5 cut(s)	389, 1000, 1207, 1768, 2089
PleI	GAGTC	2 cut(s)	1322, 1805
PpsI	GAGTC	2 cut(s)	1322, 1805
PshAI	GACNNNNGTC	1 cut(s)	2393
PshBI	ATTAAT	2 cut(s)	342, 2145
PsiI	TTATAA	2 cut(s)	968, 2199
Psp124BI	GAGCTC	1 cut(s)	62
Psp1406I	AACGTT	1 cut(s)	2292
Psp6I	CCWGG	8 cut(s)	389, 710, 732, 939, 1207, 1225, 1522, 1768
PspFI	CCCAGC	1 cut(s)	824
PspGI	CCWGG	8 cut(s)	389, 710, 732, 939, 1207, 1225, 1522, 1768
PspN4I	GGNNCC	3 cut(s)	240, 858, 2152
PspPI	GGNCC	7 cut(s)	415, 682, 1094, 1354, 1706, 1785, 1982
PspXI	VCTCGAGB	2 cut(s)	264, 1701
PstI	CTGCAG	2 cut(s)	796, 1379
PstNI	CAGNNNCTG	2 cut(s)	701, 1351
PsuI	RGATCY	6 cut(s)	215, 238, 1131, 1348, 1711, 2150
PvuII	CAGCTG	1 cut(s)	2435
RsaI	GTAC	6 cut(s)	323, 893, 1231, 1250, 1651, 1672
RsaNI	GTAC	6 cut(s)	322, 892, 1230, 1249, 1650, 1671
RseI	CAYNNNNRTG	2 cut(s)	846, 1031
SacI	GAGCTC	1 cut(s)	62
SaqAI	TTAA	8 cut(s)	120, 342, 378, 504, 1445, 1899, 2145, 2532
Sau96I	GGNCC	7 cut(s)	415, 682, 1094, 1354, 1706, 1785, 1982
ScaI	AGTACT	1 cut(s)	1672
SchI	GAGTC	2 cut(s)	1322, 1805
SduI	GDGCHC	3 cut(s)	62, 1808, 2083
SexAI	ACCWGGT	1 cut(s)	1225
SfaNI	GCATC	5 cut(s)	707, 838, 1465, 1536, 1946
SfcI	CTRYAG	5 cut(s)	792, 1168, 1375, 1663, 2073
Sfr274I	CTCGAG	3 cut(s)	264, 639, 1701
SinI	GGWCC	3 cut(s)	415, 1094, 1354
SlaI	CTCGAG	3 cut(s)	264, 639, 1701
SmiI	ATTTAAAT	1 cut(s)	505
SmiMI	CAYNNNNRTG	2 cut(s)	846, 1031
SmlI	CTYRAG	5 cut(s)	264, 639, 1330, 1701, 2398
SmoI	CTYRAG	5 cut(s)	264, 639, 1330, 1701, 2398
SphI	GCATGC	1 cut(s)	1274
SsiI	CCGC	5 cut(s)	680, 685, 930, 1788, 2154
SspI	AATATT	1 cut(s)	226
SspMI	CTAG	4 cut(s)	419, 2265, 2379, 2439
SstI	GAGCTC	1 cut(s)	62
StyI	CCWWGG	4 cut(s)	802, 1127, 1186, 1554
SwaI	ATTTAAAT	1 cut(s)	505
TaaI	ACNGT	7 cut(s)	167, 566, 1141, 1294, 1667, 2272, 2284
TaiI	ACGT	2 cut(s)	997, 2295
TaqI	TCGA	6 cut(s)	230, 265, 640, 862, 1390, 1702
TatI	WGTACW	4 cut(s)	321, 891, 1248, 1670
TauI	GCSGC	3 cut(s)	683, 932, 1790
TfiI	GAWTC	3 cut(s)	275, 1550, 2105
Tru1I	TTAA	8 cut(s)	120, 342, 378, 504, 1445, 1899, 2145, 2532
Tru9I	TTAA	8 cut(s)	120, 342, 378, 504, 1445, 1899, 2145, 2532
TscAI	CASTG	6 cut(s)	784, 819, 1144, 1899, 2062, 2182
TseFI	GTSAC	2 cut(s)	112, 1198
Tsp45I	GTSAC	2 cut(s)	112, 1198
TspDTI	ATGAA	7 cut(s)	260, 267, 573, 602, 648, 1529, 1763
TspGWI	ACGGA	2 cut(s)	251, 1573
TspRI	CASTG	6 cut(s)	784, 819, 1144, 1899, 2062, 2182
VpaK11BI	GGWCC	3 cut(s)	415, 1094, 1354
VspI	ATTAAT	2 cut(s)	342, 2145
XapI	RAATTY	6 cut(s)	9, 807, 1441, 1619, 1820, 2227
XbaI	TCTAGA	1 cut(s)	2264
XceI	RCATGY	3 cut(s)	845, 1114, 1274
XcmI	CCANNNNNNNNNTGG	1 cut(s)	480
XhoI	CTCGAG	3 cut(s)	264, 639, 1701
XspI	CTAG	4 cut(s)	419, 2265, 2379, 2439
ZraI	GACGTC	1 cut(s)	995
ZrmI	AGTACT	1 cut(s)	1672
Zsp2I	ATGCAT	1 cut(s)	1272

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.