Rroxscaffold_1G00059240

Belongs to the peptidase S8 family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
81247251 .. 81253844
6594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00059240.1

Sequence Viewer

Length: 2439 bp
ATGGGAAGAATTTATGGGGTGCATTTGGTGGTGTTACTTGTTTTGGGGATGGTTGTGAGCTCTTGGTGTCAGGATGATGATGATTATGATAACATCTCTGCTGTGTATATTGTCACTCTTAAACAAGCTCCTGTTGCTCACTACTTGGCTGACCTGAGAAAGAACAGTCAAGGTTTGAATGGGGATACTGAGAGGTTGAGCATTCACAAACCAAGATCTATAAATATTTCAAGGACGGATCCTAAGTATGCCTCATACATTGCTCGAGTTCATGATTCATTATTGAGGAGGGCGTTGAAAGGGGAGAAATATCTGAAGCTGTACAGCTACCACTACTTGATCAATGGGTTTGCTGTGCTTGTTACCCCGGATCAGGTTAATAAGCTTTCCAGGAGGAGAGAAGTAGCAAATGTGGTCCTGGATTTCTCTGTTAGAACTGCAACAACCCATACTCCTCAGTTCTTGGGTCTACCACAAGGAGCATGGGTCCAAGGAGGTGGATTTAAATCAGCCGGAGAAGGGGTTGTGATTGGATTTATTGATACTGGCATTGATCCAACACACAGTAGCTTTGCTGATAATTCATCTAAAAATCCATACCCAGTTCCAGCTCATTTCTCGGGCGTCTGTGAGGACTATGCTTCTCCTTTTGACGGTGATGGCCACGGCACGCACACTGCTTCCATTGCTGCAGGAAACCATGGAATTCCAGTGGTTGTTGCTGGGCATCATTTTGGACATGCAAGTGGGATGGCTCCTCGATCACACATTGCTGTTTACAAGGCATTGTACAAAAGCTTTGGAGGCTTTGCTGCTGATGTTGTTGCTGCAATAGACCAGGCTGCTCAGGATGGGGTTGACATTATAAGCTTATCAATCACTCCCAATAGACGTCCTCCCGGAGTTGCAACATTTTTCAACCCCATAGATATGGCGACACTATCAGCCGTAAAGGTTGGTATATTTGTTGTCCAAGCAGCAGGAAATACTGGACCATCACCAAAAAGCATGTCTTCCTTCAGTCCATGGATCTTCACTGTTGGTTCTGCTTCTCATGACAGAACCTACAGCAACTCTATAACCCTTGGCAACAATGTGACCATTCCTGGAGTTGGACTTGCACCTGGTACACAGAATGATACAATGTACACGCTGATTTCTGCAATGCATGCTTTGAATAATGACACAACAGTTACAGATGATATGTATGTAAGTGAATGCCAAGACTCGAGCAACTTCAATCAGGATCTGGTCCGGGGAAACCTGTTGATCTGCAGCTACTCAATTCGATTTGTGCTTGGAATGTCCACAATACAGCAAGCCATACAAACAGCGCAAAATTTAAGTGCAGTTGGTGTTGTTTTTTATATGGATGCTTTTGTGATTGGTTATCAACTCAACCCAACTCCAATGAAAATACCTGGGATCATAATTTCTTCCCCGGAGGATTCCAAGGCTTTTATCCAATACTACAATCGTTCCGTGGAGAGAGATATCATGACGAAGAAAATTATCAAATTTGGGGCAGTTGCAGCCATTTGTGGTGGTACAAAAGCGAACTATAGTAGTACTTCTCCAAAGATCATGTATTACTCTGCTCGAGGGCCAGATCCAGAAGACAATTCTCTTGATATTGCAGACATAATGAAACCCAATTTGGTAGCTCCTGGAAACTCTATATGGGCTGCTTGGAGTTCTATGGGCACAGACTCGGTTGAATTTCAAGGTGAGAGCTTTGCAATGATGTCTGGGACAAGCATGGCTGCTCCTCATGTTGCTGGTCTTGCTGCACTGGTTAAGCAGAAGTTTCCCAATTTCAGTCCTTCAGCCGTTGCATCTGCACTTTCAACAACGGCTTCTCTATATGACAAGTCTGGTGGGCCAATAATGGCTCAGCGTGCTTATGCTTTTCCAGATCAAAACCAGTCTCCAGCAACGCCGTTTGACATGGGCAGTGGTTTTGTAAATGCTACAGGAGCACTAAATCCGGGATTGATTTTTGATTCCAGTTATGACAATTATATGTCATTTCTTTGTGGCATTAATGGATCCGCACCTGTGGTTTTGAATTACACTGGTCAGAGCTGTTGGGTTTATAACTCTACCATCAATGCCGGAGACCTGAATTTACCATCAATAACAATAGCAAACCTCAACCAGTCTAGAACTGTTCTAAGAACCGTGATCAACGTTGCTGGAAATGAGACTTATAGTATCGGCTGGAGTGCGCCTTTCGGAGTTTCGCTAAAAGTGTCTCCATCACATTTTTACATTGCTAGTGGGGAGACACAGGTCTTGAGTGTATTCTTCAATGCTACGAGCAACAGCACAGCTGCTAGCTATGGAAGGATAGGACTATTTGGAAATCAAGGTCATGTTGTCAACATTCCTTTGTCTGTCATTGTCAAAATCACATATAATACTACCATTAACAGCTAA

Protein Analysis

812

Amino Acids

86.79

Weight (kDa)

6.57

Isoelectric Point (pI)

38.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 35 - 146 4.2e-13 Peptidase inhibitor I9
Peptidase_S8 PF00082 172 - 632 4.2e-46 Subtilase family
fn3_6 PF17766 707 - 800 3.2e-15 Fibronectin type-III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 866, 2097
AatII GACGTC 1 cut(s) 895
AccI GTMKAC 1 cut(s) 469
AciI CCGC 1 cut(s) 2052
AclI AACGTT 1 cut(s) 2190
AcoI YGGCCR 1 cut(s) 661
AcsI RAATTY 6 cut(s) 9, 705, 1339, 1517, 1718, 2125
AcuI CTGAAG 3 cut(s) 335, 1003, 1809
AcyI GRCGYC 2 cut(s) 624, 892
AfaI GTAC 6 cut(s) 323, 791, 1129, 1148, 1549, 1570
AfiI CCNNNNNNNGG 4 cut(s) 373, 519, 653, 1112
AjnI CCWGG 7 cut(s) 389, 417, 837, 1105, 1123, 1420, 1666
AjuI GAANNNNNNNTTGG 2 cut(s) 1640, 1672
Alw21I GWGCWC 2 cut(s) 62, 1981
Alw26I GTCTC 5 cut(s) 1932, 2112, 2198, 2259, 2279
AlwNI CAGNNNCTG 1 cut(s) 1249
Ama87I CYCGRG 4 cut(s) 264, 619, 1228, 1599
AoxI GGCC 3 cut(s) 661, 1604, 1880
ApoI RAATTY 6 cut(s) 9, 705, 1339, 1517, 1718, 2125
ArsI GACNNNNNNTTYG 2 cut(s) 995, 1027
AseI ATTAAT 1 cut(s) 2043
AspLEI GCGC 2 cut(s) 1336, 2230
AspS9I GGNCC 6 cut(s) 415, 487, 992, 1252, 1604, 1880
AsuC2I CCSGG 5 cut(s) 368, 900, 1256, 1442, 1989
AsuHPI GGTGA 3 cut(s) 668, 990, 1739
AsuNHI GCTAGC 1 cut(s) 2336
AvaI CYCGRG 4 cut(s) 264, 619, 1228, 1599
AvaII GGWCC 4 cut(s) 415, 487, 992, 1252
BaeGI GKGCMC 1 cut(s) 1706
BalI TGGCCA 1 cut(s) 663
BamHI GGATCC 2 cut(s) 238, 2048
BanII GRGCYC 1 cut(s) 62
BbsI GAAGAC 2 cut(s) 1005, 1623
Bbv12I GWGCWC 2 cut(s) 62, 1981
BccI CCATC 8 cut(s) 43, 653, 745, 845, 1003, 2114, 2140, 2266
BceAI ACGGC 5 cut(s) 682, 932, 1814, 1869, 1924
BciT130I CCWGG 7 cut(s) 391, 419, 839, 1107, 1125, 1422, 1668
BciVI GTATCC 1 cut(s) 178
BclI TGATCA 2 cut(s) 339, 2184
BcnI CCSGG 5 cut(s) 368, 900, 1256, 1442, 1989
BcoDI GTCTC 5 cut(s) 1932, 2112, 2198, 2259, 2279
BfaI CTAG 3 cut(s) 2163, 2277, 2337
BfmI CTRYAG 5 cut(s) 690, 1066, 1273, 1561, 1971
BfuI GTATCC 1 cut(s) 178
BglII AGATCT 1 cut(s) 215
BlpI GCTNAGC 1 cut(s) 1893
BmcAI AGTACT 1 cut(s) 1570
Bme18I GGWCC 4 cut(s) 415, 487, 992, 1252
BmeT110I CYCGRG 4 cut(s) 264, 619, 1228, 1599
BmgT120I GGNCC 6 cut(s) 415, 487, 992, 1252, 1604, 1880
BmiI GGNNCC 4 cut(s) 240, 488, 756, 2050
BmrI ACTGGG 1 cut(s) 596
BmsI GCATC 3 cut(s) 736, 1363, 1844
BmtI GCTAGC 1 cut(s) 2340
BmuI ACTGGG 1 cut(s) 596
BoxI GACNNNNGTC 1 cut(s) 2291
BpiI GAAGAC 2 cut(s) 1005, 1623
BpmI CTGGAG 3 cut(s) 1128, 1914, 2242
Bpu10I CCTNAGC 1 cut(s) 846
Bpu1102I GCTNAGC 1 cut(s) 1893
BpuEI CTTGAG 1 cut(s) 2317
BpuMI CCSGG 5 cut(s) 368, 900, 1256, 1442, 1989
BsaBI GATNNNNATC 1 cut(s) 505
BsaHI GRCGYC 2 cut(s) 624, 892
BsaI GGTCTC 1 cut(s) 2112
BsaXI ACNNNNNCTCC 6 cut(s) 436, 466, 471, 501, 507, 537
Bsc4I CCNNNNNNNGG 4 cut(s) 373, 519, 653, 1112
Bse1I ACTGG 9 cut(s) 550, 602, 710, 994, 1797, 1924, 2007, 2080, 2158
Bse3DI GCAATG 6 cut(s) 258, 684, 768, 1170, 1746, 2271
Bse8I GATNNNNATC 1 cut(s) 505
BseBI CCWGG 7 cut(s) 391, 419, 839, 1107, 1125, 1422, 1668
BseGI GGATG 5 cut(s) 54, 79, 756, 856, 1378
BseJI GATNNNNATC 1 cut(s) 505
BseLI CCNNNNNNNGG 4 cut(s) 373, 519, 653, 1112
BseMI GCAATG 6 cut(s) 258, 684, 768, 1170, 1746, 2271
BseMII CTCAG 5 cut(s) 146, 180, 470, 860, 1907
BseNI ACTGG 9 cut(s) 550, 602, 710, 994, 1797, 1924, 2007, 2080, 2158
BseRI GAGGAG 5 cut(s) 301, 409, 444, 747, 1758
BseSI GKGCMC 1 cut(s) 1706
BseYI CCCAGC 1 cut(s) 722
BsgI GTGCAG 3 cut(s) 1368, 1773, 1824
BshFI GGCC 3 cut(s) 663, 1606, 1882
BsiHKAI GWGCWC 2 cut(s) 62, 1981
BsiHKCI CYCGRG 4 cut(s) 264, 619, 1228, 1599
BsiSI CCGG 7 cut(s) 368, 513, 900, 1255, 1442, 1988, 2115
BslFI GGGAC 1 cut(s) 1765
BslI CCNNNNNNNGG 4 cut(s) 373, 519, 653, 1112
BsmAI GTCTC 5 cut(s) 1932, 2112, 2198, 2259, 2279
BsmFI GGGAC 1 cut(s) 1765
BsmI GAATGC 2 cut(s) 201, 1223
BsnI GGCC 3 cut(s) 663, 1606, 1882
Bso31I GGTCTC 1 cut(s) 2112
BsoBI CYCGRG 4 cut(s) 264, 619, 1228, 1599
Bsp1286I GDGCHC 3 cut(s) 62, 1706, 1981
Bsp1407I TGTACA 3 cut(s) 321, 789, 1146
Bsp1720I GCTNAGC 1 cut(s) 1893
Bsp19I CCATGG 2 cut(s) 700, 1025
BspACI CCGC 1 cut(s) 2052
BspANI GGCC 3 cut(s) 663, 1606, 1882
BspCNI CTCAG 5 cut(s) 147, 181, 469, 859, 1906
BspHI TCATGA 3 cut(s) 271, 1054, 1497
BspLI GGNNCC 4 cut(s) 240, 488, 756, 2050
BspMAI CTGCAG 2 cut(s) 694, 1277
BspOI GCTAGC 1 cut(s) 2340
BspTNI GGTCTC 1 cut(s) 2112
BsrDI GCAATG 6 cut(s) 258, 684, 768, 1170, 1746, 2271
BsrGI TGTACA 3 cut(s) 321, 789, 1146
BsrI ACTGG 9 cut(s) 550, 602, 710, 994, 1797, 1924, 2007, 2080, 2158
BssNI GRCGYC 2 cut(s) 624, 892
BssT1I CCWWGG 5 cut(s) 490, 700, 1025, 1084, 1452
Bst2UI CCWGG 7 cut(s) 391, 419, 839, 1107, 1125, 1422, 1668
Bst4CI ACNGT 7 cut(s) 167, 566, 656, 1039, 1192, 2170, 2182
BstACI GRCGYC 2 cut(s) 624, 892
BstAPI GCANNNNNTGC 1 cut(s) 1169
BstAUI TGTACA 3 cut(s) 321, 789, 1146
BstC8I GCNNGC 5 cut(s) 671, 1170, 1320, 1899, 2338
BstDEI CTNAG 7 cut(s) 155, 189, 243, 456, 846, 1893, 2174
BstDSI CCRYGG 4 cut(s) 664, 700, 1025, 1482
BstF5I GGATG 5 cut(s) 54, 79, 756, 856, 1378
BstHHI GCGC 2 cut(s) 1336, 2230
BstMAI GTCTC 5 cut(s) 1932, 2112, 2198, 2259, 2279
BstMWI GCNNNNNNNGC 8 cut(s) 134, 686, 804, 1169, 1532, 1784, 1898, 1976
BstNI CCWGG 7 cut(s) 391, 419, 839, 1107, 1125, 1422, 1668
BstNSI RCATGY 3 cut(s) 743, 1012, 1172
BstPAI GACNNNNGTC 1 cut(s) 2291
BstSFI CTRYAG 5 cut(s) 690, 1066, 1273, 1561, 1971
BstSLI GKGCMC 1 cut(s) 1706
BstV2I GAAGAC 2 cut(s) 1005, 1623
BstX2I RGATCY 6 cut(s) 215, 238, 1029, 1246, 1609, 2048
BstXI CCANNNNNNTGG 2 cut(s) 497, 931
BstYI RGATCY 6 cut(s) 215, 238, 1029, 1246, 1609, 2048
BsuI GTATCC 1 cut(s) 178
BsuRI GGCC 3 cut(s) 663, 1606, 1882
BtgI CCRYGG 4 cut(s) 664, 700, 1025, 1482
BtsCI GGATG 5 cut(s) 54, 79, 756, 856, 1378
BtsI GCAGTG 2 cut(s) 675, 1960
BtsIMutI CAGTG 6 cut(s) 675, 717, 1035, 1790, 1960, 2073
Cac8I GCNNGC 5 cut(s) 671, 1170, 1320, 1899, 2338
CaiI CAGNNNCTG 1 cut(s) 1249
CciI TCATGA 3 cut(s) 271, 1054, 1497
CfoI GCGC 2 cut(s) 1336, 2230
Cfr13I GGNCC 6 cut(s) 415, 487, 992, 1252, 1604, 1880
CseI GACGC 1 cut(s) 613
CsiI ACCWGGT 1 cut(s) 1123
Csp6I GTAC 6 cut(s) 322, 790, 1128, 1147, 1548, 1569
CspCI CAANNNNNGTGG 2 cut(s) 1858, 1893
CviQI GTAC 6 cut(s) 322, 790, 1128, 1147, 1548, 1569
DdeI CTNAG 7 cut(s) 155, 189, 243, 456, 846, 1893, 2174
DraI TTTAAA 1 cut(s) 505
EaeI YGGCCR 1 cut(s) 661
Ecl136II GAGCTC 1 cut(s) 60
Eco130I CCWWGG 5 cut(s) 490, 700, 1025, 1084, 1452
Eco24I GRGCYC 1 cut(s) 62
Eco31I GGTCTC 1 cut(s) 2112
Eco32I GATATC 1 cut(s) 1495
Eco47I GGWCC 4 cut(s) 415, 487, 992, 1252
Eco53kI GAGCTC 1 cut(s) 60
Eco57I CTGAAG 3 cut(s) 335, 1003, 1809
Eco88I CYCGRG 4 cut(s) 264, 619, 1228, 1599
EcoICRI GAGCTC 1 cut(s) 60
EcoRI GAATTC 1 cut(s) 705
EcoRII CCWGG 7 cut(s) 389, 417, 837, 1105, 1123, 1420, 1666
EcoRV GATATC 1 cut(s) 1495
EcoT14I CCWWGG 5 cut(s) 490, 700, 1025, 1084, 1452
EcoT22I ATGCAT 1 cut(s) 1170
EcoT38I GRGCYC 1 cut(s) 62
ErhI CCWWGG 5 cut(s) 490, 700, 1025, 1084, 1452
FalI AAGNNNNNCTT 2 cut(s) 997, 1029
FaqI GGGAC 1 cut(s) 1765
FbaI TGATCA 2 cut(s) 339, 2184
FblI GTMKAC 1 cut(s) 469
FokI GGATG 5 cut(s) 61, 86, 763, 863, 1385
FriOI GRGCYC 1 cut(s) 62
FspBI CTAG 3 cut(s) 2163, 2277, 2337
GlaI GCGC 2 cut(s) 1335, 2229
GsaI CCCAGC 1 cut(s) 726
GsuI CTGGAG 3 cut(s) 1128, 1914, 2242
HaeIII GGCC 3 cut(s) 663, 1606, 1882
HapII CCGG 7 cut(s) 368, 513, 900, 1255, 1442, 1988, 2115
HgaI GACGC 1 cut(s) 613
HhaI GCGC 2 cut(s) 1336, 2230
Hin1I GRCGYC 2 cut(s) 624, 892
Hin6I GCGC 2 cut(s) 1334, 2228
HinP1I GCGC 2 cut(s) 1334, 2228
HincII GTYRAC 2 cut(s) 859, 2383
HindII GTYRAC 2 cut(s) 859, 2383
HindIII AAGCTT 3 cut(s) 383, 796, 868
HinfI GANTC 5 cut(s) 275, 1226, 1448, 1709, 2003
HpaII CCGG 7 cut(s) 368, 513, 900, 1255, 1442, 1988, 2115
HphI GGTGA 3 cut(s) 668, 990, 1739
Hpy166II GTNNAC 7 cut(s) 470, 778, 859, 1130, 1149, 1308, 2383
Hpy188I TCNGA 3 cut(s) 315, 2082, 2237
Hpy8I GTNNAC 7 cut(s) 470, 778, 859, 1130, 1149, 1308, 2383
HpyAV CCTTC 4 cut(s) 512, 1027, 1833, 2340
HpyCH4III ACNGT 7 cut(s) 167, 566, 656, 1039, 1192, 2170, 2182
HpyCH4IV ACGT 2 cut(s) 892, 2190
HpyF10VI GCNNNNNNNGC 8 cut(s) 134, 686, 804, 1169, 1532, 1784, 1898, 1976
HpyF3I CTNAG 7 cut(s) 155, 189, 243, 456, 846, 1893, 2174
HpySE526I ACGT 2 cut(s) 892, 2190
Hsp92I GRCGYC 2 cut(s) 624, 892
HspAI GCGC 2 cut(s) 1334, 2228
Ksp22I TGATCA 2 cut(s) 339, 2184
LmnI GCTCC 6 cut(s) 133, 479, 760, 1669, 1771, 1976
LweI GCATC 3 cut(s) 736, 1363, 1844
MabI ACCWGGT 1 cut(s) 1123
MaeI CTAG 3 cut(s) 2163, 2277, 2337
MaeII ACGT 2 cut(s) 892, 2190
MaeIII GTNAC 5 cut(s) 33, 112, 361, 1096, 1192
MboII GAAGA 7 cut(s) 18, 1005, 1024, 1428, 1516, 1628, 2299
MflI RGATCY 6 cut(s) 215, 238, 1029, 1246, 1609, 2048
MhlI GDGCHC 3 cut(s) 62, 1706, 1981
MlsI TGGCCA 1 cut(s) 663
MluNI TGGCCA 1 cut(s) 663
MlyI GAGTC 2 cut(s) 1220, 1703
MmeI TCCRAC 2 cut(s) 581, 1093
Mox20I TGGCCA 1 cut(s) 663
Mph1103I ATGCAT 1 cut(s) 1170
MscI TGGCCA 1 cut(s) 663
MseI TTAA 7 cut(s) 120, 378, 504, 1343, 1797, 2043, 2430
MslI CAYNNNNRTG 2 cut(s) 744, 929
Msp20I TGGCCA 1 cut(s) 663
MspA1I CMGCKG 1 cut(s) 2333
MspI CCGG 7 cut(s) 368, 513, 900, 1255, 1442, 1988, 2115
Mva1269I GAATGC 2 cut(s) 201, 1223
MvaI CCWGG 7 cut(s) 391, 419, 839, 1107, 1125, 1422, 1668
MwoI GCNNNNNNNGC 8 cut(s) 134, 686, 804, 1169, 1532, 1784, 1898, 1976
NciI CCSGG 5 cut(s) 368, 900, 1256, 1442, 1989
NcoI CCATGG 2 cut(s) 700, 1025
NheI GCTAGC 1 cut(s) 2336
NlaIV GGNNCC 4 cut(s) 240, 488, 756, 2050
NmuCI GTSAC 2 cut(s) 112, 1096
NsiI ATGCAT 1 cut(s) 1170
NspI RCATGY 3 cut(s) 743, 1012, 1172
PaeI GCATGC 1 cut(s) 1172
PaeR7I CTCGAG 3 cut(s) 264, 1228, 1599
PagI TCATGA 3 cut(s) 271, 1054, 1497
PctI GAATGC 2 cut(s) 201, 1223
PfeI GAWTC 3 cut(s) 275, 1448, 2003
PfoI TCCNGGA 6 cut(s) 389, 417, 898, 1105, 1666, 1987
PleI GAGTC 2 cut(s) 1220, 1703
PpsI GAGTC 2 cut(s) 1220, 1703
PshAI GACNNNNGTC 1 cut(s) 2291
PshBI ATTAAT 1 cut(s) 2043
PsiI TTATAA 2 cut(s) 866, 2097
Psp124BI GAGCTC 1 cut(s) 62
Psp1406I AACGTT 1 cut(s) 2190
Psp6I CCWGG 7 cut(s) 389, 417, 837, 1105, 1123, 1420, 1666
PspFI CCCAGC 1 cut(s) 722
PspGI CCWGG 7 cut(s) 389, 417, 837, 1105, 1123, 1420, 1666
PspN4I GGNNCC 4 cut(s) 240, 488, 756, 2050
PspPI GGNCC 6 cut(s) 415, 487, 992, 1252, 1604, 1880
PspXI VCTCGAGB 3 cut(s) 264, 1228, 1599
PstI CTGCAG 2 cut(s) 694, 1277
PstNI CAGNNNCTG 1 cut(s) 1249
PsuI RGATCY 6 cut(s) 215, 238, 1029, 1246, 1609, 2048
PvuII CAGCTG 1 cut(s) 2333
RsaI GTAC 6 cut(s) 323, 791, 1129, 1148, 1549, 1570
RsaNI GTAC 6 cut(s) 322, 790, 1128, 1147, 1548, 1569
RseI CAYNNNNRTG 2 cut(s) 744, 929
SacI GAGCTC 1 cut(s) 62
SaqAI TTAA 7 cut(s) 120, 378, 504, 1343, 1797, 2043, 2430
Sau96I GGNCC 6 cut(s) 415, 487, 992, 1252, 1604, 1880
ScaI AGTACT 1 cut(s) 1570
SchI GAGTC 2 cut(s) 1220, 1703
SduI GDGCHC 3 cut(s) 62, 1706, 1981
SexAI ACCWGGT 1 cut(s) 1123
SfaNI GCATC 3 cut(s) 736, 1363, 1844
SfcI CTRYAG 5 cut(s) 690, 1066, 1273, 1561, 1971
Sfr274I CTCGAG 3 cut(s) 264, 1228, 1599
SinI GGWCC 4 cut(s) 415, 487, 992, 1252
SlaI CTCGAG 3 cut(s) 264, 1228, 1599
SmiI ATTTAAAT 1 cut(s) 505
SmiMI CAYNNNNRTG 2 cut(s) 744, 929
SmlI CTYRAG 4 cut(s) 264, 1228, 1599, 2296
SmoI CTYRAG 4 cut(s) 264, 1228, 1599, 2296
SphI GCATGC 1 cut(s) 1172
SsiI CCGC 1 cut(s) 2052
SspI AATATT 1 cut(s) 226
SspMI CTAG 3 cut(s) 2163, 2277, 2337
SstI GAGCTC 1 cut(s) 62
StyI CCWWGG 5 cut(s) 490, 700, 1025, 1084, 1452
SwaI ATTTAAAT 1 cut(s) 505
TaaI ACNGT 7 cut(s) 167, 566, 656, 1039, 1192, 2170, 2182
TaiI ACGT 2 cut(s) 895, 2193
TaqI TCGA 5 cut(s) 265, 760, 1229, 1288, 1600
TatI WGTACW 4 cut(s) 321, 789, 1146, 1568
TfiI GAWTC 3 cut(s) 275, 1448, 2003
Tru1I TTAA 7 cut(s) 120, 378, 504, 1343, 1797, 2043, 2430
Tru9I TTAA 7 cut(s) 120, 378, 504, 1343, 1797, 2043, 2430
TscAI CASTG 6 cut(s) 682, 717, 1042, 1797, 1960, 2080
TseFI GTSAC 2 cut(s) 112, 1096
Tsp45I GTSAC 2 cut(s) 112, 1096
TspDTI ATGAA 5 cut(s) 260, 267, 573, 1427, 1661
TspGWI ACGGA 2 cut(s) 251, 1471
TspRI CASTG 6 cut(s) 682, 717, 1042, 1797, 1960, 2080
VpaK11BI GGWCC 4 cut(s) 415, 487, 992, 1252
VspI ATTAAT 1 cut(s) 2043
XapI RAATTY 6 cut(s) 9, 705, 1339, 1517, 1718, 2125
XbaI TCTAGA 1 cut(s) 2162
XceI RCATGY 3 cut(s) 743, 1012, 1172
XcmI CCANNNNNNNNNTGG 1 cut(s) 480
XhoI CTCGAG 3 cut(s) 264, 1228, 1599
XmiI GTMKAC 1 cut(s) 469
XspI CTAG 3 cut(s) 2163, 2277, 2337
ZraI GACGTC 1 cut(s) 893
ZrmI AGTACT 1 cut(s) 1570
Zsp2I ATGCAT 1 cut(s) 1170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.