Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002848.1

Orthogroup ID

OG0003672

Physical Location & Seq

Genomic Coordinates Reverse (-)

54448 .. 63645

Gene Structure 9198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002848.1_g000016.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2697 bp

atggcttcactttcactttcaaccaagttccctctgtaccccaacctcacatttctccaattccagtacccaaacagacctcaaagaatcatctttcctgtcaagaagacaacccagataggctgctccgccacaggtcaaccccaccaacaacaaagaccacccaagaacaagaagaaaatcctcaccgacggcgacaaaggcgtcgacccagttggcttcctctccaaattcgacatctcccataagcaatttgctcagttcctccgtgaaagacacaaagccctcaaggacctgacggatgaaatattaactcgccacatcaacctcagggatatgtcttctggatatgagatattgggtttgcatcgacacccagaacatagagaggattatatggagtgggctccaggtgctcgctactgcgcactggttggtgatttcaatgggtggtctcccacagagaactgtgcaaaagagggtcattttggacatgatgactatggatactggttcatcattcttgaagataagttgaggaatggagagaaaccagatgagctgtactttcaacagtataactatgtagatgattacgataaaggtgacagtggtgttactattgaagaagtctttaagaaggcaaatgatgagtattgggaacctggagaagaccggtttctaaaaaaccgcttagaagtaccagcaaaattgtatgagcagatttttgggcctaatggacctcaaacgttagaggaacttgaagaaataccagatgcagaaacaagatataaagcatggaaagaacagcataaagatgacccgcctagtaacttaccttcttatgatgtgattgacaatggaaaagagtatgacatttacaatgttgtacttgatccagtatcacaagagaaatttaaagcaaagaagcctcccttgccatattggttcgaaacacgtaaaggaaggaaggcatggttgaaaaagtataggccgtgcattcctcatgggagcaagtacagggtctattttaatactcctagtgggccactggaacgagtacctgcttgggcaacttatgtggaaccagacgcagatggaggacaagcttttgcaatccactgggaaccacccccagaacttgcatacaaatggaagaatgcacgccctaaagtgccaaagtccctgcgcatttatgaatgtcatgttggcataagtggatcagagcctaaagtatcttctttcagtgatttcacagagaaggttcttcctcatgtaaaggaggctggctataatgcaattcagctgattggagttattgagcacaaagattatttcactgttggttatagagccactaatttatatgctgttagcagccgatttggcactcctgatgatttcaagcggttggttgatgaagcacatggacaaggactgctggtcttcttggagattgtccattcctactcagctgcagatgagatggttggattaggactctttgatggaacaaatgactgctacttccatactggcaaacggggacatcacaagcactggggtaccagaatgtttaaatatggtgatctggatgttctgcatttccttctctcgaatttgaactggtggatcacggagtaccaagttgatggttttcagttccattcactctcatcaatgatttatactcataatggttttgcttcgtttaccggtgacttggaggagtactgcaatcaatatgttgatagggacgcattgttatacctcattttggcaaacgaaatacttcatgctctccacccagatataataacgattgctgaagatgcaaccttctatccaggtctatgtgacccaatctctcaaggcggattgggctttgattattgtgtcaatctttctgtctcagagatgtggtcatctttccttgagaatgttccggaccatgattggagcatgagtaagattgtgagtacattaatgggcaacaaaaattatgcagataagatgctcatgtatgctgaaaatcataaccagtcaatttctggagggagatcttttgccgagatactgtttggtgaaatcagggagggctctcctgacaaggagaaattattgctcagaggttgttccttgcacaagatgatcagattaattaccatgacaattggtggccgtgcatatctcaacttcatgggcaatgaatttgggcatccagagagggttgagttcccaatgccaagcaacaatttctcattttctcttgccaaccgaaggtgggatcttcttgccaacaagggattgcatctcaacttgtttaccttcgataaggacttgatgaagttggatgaaaatgaaagaatacttccaagagttttacccagcattcaccatgtgaatgacaatagcatggtaatttcttacataagagggcctcttctattcgtatttaactttcatccaacagattcttatgaaggataccgaataggtgtagaagaagctggagagtatcaacttgtactaaatacggatgaaaggaagtacggaggtcaagggcttttgaaggatgaccaatattctaggacaactactagccaaagaagtgatggcctccgaaacagcttagaagttcctctgcccagtaggactgcccaggtttacaaattaagtcggattttaagaatataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0007275 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009791 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0048856 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 map00500 map01100 map01110

Pfam Domains

Protein Families

Alpha-amylase Alpha-amylase_C CBM_48

Protein Analysis

898

Amino Acids

103.44

Weight (kDa)

5.99

Isoelectric Point (pI)

36.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003672)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20440 AT3G20440 AT3G20440
fragaria_vesca	FvH4_3g23220 FvH4_3g23220 FvH4_3g23220 FvH4_3g23220 FvH4_3g23220 FvH4_3g23220 FvH4_3g23220 FvH4_3g23220 FvH4_3g23220
malus_domestica	MD11G1212700.v1.1
prunus_persica	Prupe.4G219000_v2.0.a1 Prupe.4G219000_v2.0.a1 Prupe.4G219000_v2.0.a1 Prupe.4G219000_v2.0.a1 Prupe.4G219000_v2.0.a1 Prupe.4G219000_v2.0.a1 Prupe.4G219000_v2.0.a1
pyrus_communis	pycom11g18770
rosa_chinensis	RchiOBHm_Chr5g0040901 RchiOBHm_Chr5g0040911
rosa_laevigata	RLG00000034012
rosa_multiflora	Rmu_sc0002848.1_g000016 Rmu_ssc0000416.1_g000003
rosa_roxburghii	Rroxscaffold_1G00039790
rosa_rugosa	Rorug05G0188500 Rorug05G0188600 Rorug05G0188600
rosa_samantha	Rh5AG274100 Rh5BG279100 Rh5CG311200 Rh5DG287300
rosa_wichuraiana	Rw5G025750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	203
Acc16I	TGCGCA	2 cut(s)	427, 1190
Acc36I	ACCTGC	1 cut(s)	1072
Acc65I	GGTACC	1 cut(s)	1565
AccB1I	GGYRCC	1 cut(s)	1565
AccI	GTMKAC	1 cut(s)	207
AccIII	TCCGGA	1 cut(s)	1945
AciI	CCGC	5 cut(s)	129, 691, 824, 1408, 1875
AclI	AACGTT	1 cut(s)	749
AclWI	GGATC	4 cut(s)	890, 1228, 1640, 2295
AcoI	YGGCCR	1 cut(s)	2179
AcsI	RAATTY	4 cut(s)	230, 914, 1618, 2210
AcuI	CTGAAG	1 cut(s)	1848
AcyI	GRCGYC	1 cut(s)	204
AdeI	CACNNNGTG	1 cut(s)	2401
AfiI	CCNNNNNNNGG	3 cut(s)	1777, 2280, 2284
AflIII	ACRYGT	1 cut(s)	956
AgeI	ACCGGT	2 cut(s)	675, 1715
AhdI	GACNNNNNGTC	1 cut(s)	1442
AjnI	CCWGG	4 cut(s)	409, 664, 1846, 2661
AjuI	GAANNNNNNNTTGG	2 cut(s)	1191, 1223
AluBI	AGCT	6 cut(s)	562, 1109, 1306, 1475, 2510, 2631
AluI	AGCT	6 cut(s)	562, 1109, 1306, 1475, 2510, 2631
Alw21I	GWGCWC	2 cut(s)	418, 1326
Alw26I	GTCTC	2 cut(s)	459, 1915
AlwI	GGATC	4 cut(s)	890, 1228, 1640, 2295
Aor13HI	TCCGGA	1 cut(s)	1945
AoxI	GGCC	6 cut(s)	731, 992, 1046, 2179, 2438, 2617
ApeKI	GCWGC	3 cut(s)	123, 1377, 1475
ApoI	RAATTY	4 cut(s)	230, 914, 1618, 2210
AseI	ATTAAT	2 cut(s)	1985, 2159
AsiGI	ACCGGT	2 cut(s)	675, 1715
Asp700I	GAANNNNTTC	1 cut(s)	1791
Asp718I	GGTACC	1 cut(s)	1565
AspLEI	GCGC	2 cut(s)	428, 1191
AspS9I	GGNCC	6 cut(s)	292, 731, 740, 1046, 1948, 2438
AsuHPI	GGTGA	7 cut(s)	178, 449, 617, 1598, 1730, 2096, 2387
AsuII	TTCGAA	1 cut(s)	951
AvaII	GGWCC	3 cut(s)	292, 740, 1948
AxyI	CCTNAGG	1 cut(s)	329
BaeI	ACNNNNGTAYC	2 cut(s)	1549, 1582
BanI	GGYRCC	1 cut(s)	1565
BanII	GRGCYC	2 cut(s)	409, 2102
BarI	GAAGNNNNNNTAC	2 cut(s)	823, 855
BbsI	GAAGAC	4 cut(s)	113, 333, 678, 1438
Bbv12I	GWGCWC	2 cut(s)	418, 1326
BbvI	GCAGC	3 cut(s)	110, 1389, 1462
BccI	CCATC	5 cut(s)	1091, 1480, 1502, 1646, 2609
BceAI	ACGGC	3 cut(s)	208, 979, 2166
BciT130I	CCWGG	4 cut(s)	411, 666, 1848, 2663
BciVI	GTATCC	2 cut(s)	500, 2480
BclI	TGATCA	1 cut(s)	2151
BcoDI	GTCTC	2 cut(s)	459, 1915
BfaI	CTAG	4 cut(s)	828, 1041, 2589, 2601
BfmI	CTRYAG	1 cut(s)	1476
BfuAI	ACCTGC	1 cut(s)	1072
BfuI	GTATCC	2 cut(s)	500, 2480
BglI	GCCNNNNNGGC	1 cut(s)	1386
BglII	AGATCT	1 cut(s)	2060
BisI	GCNGC	3 cut(s)	124, 1378, 1476
BlsI	GCNGC	3 cut(s)	125, 1379, 1477
BmcAI	AGTACT	1 cut(s)	1733
Bme1390I	CCNGG	4 cut(s)	411, 666, 1848, 2663
Bme18I	GGWCC	3 cut(s)	292, 740, 1948
BmeRI	GACNNNNNGTC	1 cut(s)	1442
BmgT120I	GGNCC	6 cut(s)	292, 731, 740, 1046, 1948, 2438
BmiI	GGNNCC	5 cut(s)	408, 663, 1086, 1128, 1567
BmrFI	CCNGG	4 cut(s)	411, 666, 1848, 2663
BmrI	ACTGGG	4 cut(s)	206, 1132, 1570, 2643
BmsI	GCATC	6 cut(s)	376, 766, 1822, 2004, 2227, 2320
BmuI	ACTGGG	4 cut(s)	206, 1132, 1570, 2643
BpiI	GAAGAC	4 cut(s)	113, 333, 678, 1438
BpmI	CTGGAG	4 cut(s)	393, 687, 2073, 2532
Bpu14I	TTCGAA	1 cut(s)	951
BpuEI	CTTGAG	3 cut(s)	272, 1854, 1955
BsaAI	YACGTR	1 cut(s)	959
BsaHI	GRCGYC	1 cut(s)	204
BsaI	GGTCTC	1 cut(s)	459
BsaJI	CCNNGG	1 cut(s)	2661
BsaWI	WCCGGW	3 cut(s)	675, 1715, 1945
BsaXI	ACNNNNNCTCC	2 cut(s)	1951, 1981
Bsc4I	CCNNNNNNNGG	3 cut(s)	1777, 2280, 2284
Bse118I	RCCGGY	2 cut(s)	675, 1715
Bse21I	CCTNAGG	1 cut(s)	329
Bse3DI	GCAATG	1 cut(s)	2212
BseAI	TCCGGA	1 cut(s)	1945
BseBI	CCWGG	4 cut(s)	411, 666, 1848, 2663
BseDI	CCNNGG	1 cut(s)	2661
BseGI	GGATG	7 cut(s)	307, 1600, 2218, 2359, 2464, 2545, 2581
BseLI	CCNNNNNNNGG	3 cut(s)	1777, 2280, 2284
BseMI	GCAATG	1 cut(s)	2212
BseMII	CTCAG	5 cut(s)	272, 343, 1485, 1926, 2140
BseRI	GAGGAG	1 cut(s)	1742
BseXI	GCAGC	3 cut(s)	110, 1389, 1462
BseYI	CCCAGC	1 cut(s)	2387
BshFI	GGCC	6 cut(s)	733, 994, 1048, 2181, 2440, 2619
BshNI	GGYRCC	1 cut(s)	1565
BshTI	ACCGGT	2 cut(s)	675, 1715
BsiHKAI	GWGCWC	2 cut(s)	418, 1326
BsiSI	CCGG	3 cut(s)	676, 1716, 1946
BslFI	GGGAC	3 cut(s)	1168, 1560, 1769
BslI	CCNNNNNNNGG	3 cut(s)	1777, 2280, 2284
BsmAI	GTCTC	2 cut(s)	459, 1915
BsmFI	GGGAC	3 cut(s)	1168, 1560, 1769
BsmI	GAATGC	3 cut(s)	999, 1165, 2391
BsnI	GGCC	6 cut(s)	733, 994, 1048, 2181, 2440, 2619
Bso31I	GGTCTC	1 cut(s)	459
Bsp119I	TTCGAA	1 cut(s)	951
Bsp1286I	GDGCHC	4 cut(s)	409, 418, 1326, 2102
Bsp13I	TCCGGA	1 cut(s)	1945
Bsp143I	GATC	7 cut(s)	895, 1220, 1588, 1632, 2060, 2151, 2287
BspACI	CCGC	5 cut(s)	129, 691, 824, 1408, 1875
BspANI	GGCC	6 cut(s)	733, 994, 1048, 2181, 2440, 2619
BspCNI	CTCAG	5 cut(s)	271, 342, 1484, 1925, 2139
BspEI	TCCGGA	1 cut(s)	1945
BspLI	GGNNCC	5 cut(s)	408, 663, 1086, 1128, 1567
BspMAI	CTGCAG	1 cut(s)	1480
BspMI	ACCTGC	1 cut(s)	1072
BspPI	GGATC	4 cut(s)	890, 1228, 1640, 2295
BspT104I	TTCGAA	1 cut(s)	951
BspT107I	GGYRCC	1 cut(s)	1565
BspTNI	GGTCTC	1 cut(s)	459
BsrDI	GCAATG	1 cut(s)	2212
BsrFI	RCCGGY	2 cut(s)	675, 1715
BssAI	RCCGGY	2 cut(s)	675, 1715
BssECI	CCNNGG	1 cut(s)	2661
BssMI	GATC	7 cut(s)	895, 1220, 1588, 1632, 2060, 2151, 2287
BssNI	GRCGYC	1 cut(s)	204
Bst2UI	CCWGG	4 cut(s)	411, 666, 1848, 2663
Bst4CI	ACNGT	5 cut(s)	470, 576, 611, 1342, 2079
Bst6I	CTCTTC	1 cut(s)	2448
BstACI	GRCGYC	1 cut(s)	204
BstBAI	YACGTR	1 cut(s)	959
BstBI	TTCGAA	1 cut(s)	951
BstC8I	GCNNGC	3 cut(s)	418, 1165, 1288
BstDEI	CTNAG	7 cut(s)	258, 329, 694, 1471, 1912, 2126, 2632
BstF5I	GGATG	7 cut(s)	307, 1600, 2218, 2359, 2464, 2545, 2581
BstHHI	GCGC	2 cut(s)	428, 1191
BstKTI	GATC	7 cut(s)	898, 1223, 1591, 1635, 2063, 2154, 2290
BstMAI	GTCTC	2 cut(s)	459, 1915
BstMBI	GATC	7 cut(s)	895, 1220, 1588, 1632, 2060, 2151, 2287
BstMWI	GCNNNNNNNGC	6 cut(s)	201, 413, 937, 1386, 1832, 1881
BstNI	CCWGG	4 cut(s)	411, 666, 1848, 2663
BstSCI	CCNGG	4 cut(s)	409, 664, 1846, 2661
BstSFI	CTRYAG	1 cut(s)	1476
BstV1I	GCAGC	3 cut(s)	110, 1389, 1462
BstV2I	GAAGAC	4 cut(s)	113, 333, 678, 1438
BstX2I	RGATCY	2 cut(s)	2060, 2287
BstXI	CCANNNNNNTGG	1 cut(s)	1652
BstYI	RGATCY	2 cut(s)	2060, 2287
Bsu36I	CCTNAGG	1 cut(s)	329
BsuI	GTATCC	2 cut(s)	500, 2480
BsuRI	GGCC	6 cut(s)	733, 994, 1048, 2181, 2440, 2619
BtsCI	GGATG	7 cut(s)	307, 1600, 2218, 2359, 2464, 2545, 2581
BtsIMutI	CAGTG	7 cut(s)	428, 616, 1049, 1120, 1252, 1338, 1558
BveI	ACCTGC	1 cut(s)	1072
Cac8I	GCNNGC	3 cut(s)	418, 1165, 1288
CfoI	GCGC	2 cut(s)	428, 1191
Cfr10I	RCCGGY	2 cut(s)	675, 1715
Cfr13I	GGNCC	6 cut(s)	292, 731, 740, 1046, 1948, 2438
CseI	GACGC	3 cut(s)	193, 1100, 1766
CspAI	ACCGGT	2 cut(s)	675, 1715
CspCI	CAANNNNNGTGG	2 cut(s)	1062, 1097
DdeI	CTNAG	7 cut(s)	258, 329, 694, 1471, 1912, 2126, 2632
DpnI	GATC	7 cut(s)	897, 1222, 1590, 1634, 2062, 2153, 2289
DpnII	GATC	7 cut(s)	895, 1220, 1588, 1632, 2060, 2151, 2287
DraI	TTTAAA	2 cut(s)	919, 1579
DraIII	CACNNNGTG	1 cut(s)	2401
DrdI	GACNNNNNNGTC	1 cut(s)	203
DriI	GACNNNNNGTC	1 cut(s)	1442
DseDI	GACNNNNNNGTC	1 cut(s)	203
EaeI	YGGCCR	1 cut(s)	2179
Eam1104I	CTCTTC	1 cut(s)	2448
Eam1105I	GACNNNNNGTC	1 cut(s)	1442
EarI	CTCTTC	1 cut(s)	2448
EciI	GGCGGA	2 cut(s)	118, 1890
Eco24I	GRGCYC	2 cut(s)	409, 2102
Eco31I	GGTCTC	1 cut(s)	459
Eco47I	GGWCC	3 cut(s)	292, 740, 1948
Eco57I	CTGAAG	1 cut(s)	1848
Eco81I	CCTNAGG	1 cut(s)	329
EcoO109I	RGGNCCY	2 cut(s)	292, 2438
EcoRII	CCWGG	4 cut(s)	409, 664, 1846, 2661
EcoT38I	GRGCYC	2 cut(s)	409, 2102
FalI	AAGNNNNNCTT	2 cut(s)	920, 952
FaqI	GGGAC	3 cut(s)	1168, 1560, 1769
FauI	CCCGC	1 cut(s)	831
FbaI	TGATCA	1 cut(s)	2151
FblI	GTMKAC	1 cut(s)	207
Fnu4HI	GCNGC	3 cut(s)	124, 1378, 1476
FokI	GGATG	7 cut(s)	314, 1607, 2205, 2366, 2451, 2552, 2588
FriOI	GRGCYC	2 cut(s)	409, 2102
Fsp4HI	GCNGC	3 cut(s)	124, 1378, 1476
FspBI	CTAG	4 cut(s)	828, 1041, 2589, 2601
FspI	TGCGCA	2 cut(s)	427, 1190
GlaI	GCGC	2 cut(s)	427, 1190
GluI	GCNGC	3 cut(s)	124, 1378, 1476
GsaI	CCCAGC	1 cut(s)	2391
GsuI	CTGGAG	4 cut(s)	393, 687, 2073, 2532
HaeIII	GGCC	6 cut(s)	733, 994, 1048, 2181, 2440, 2619
HapII	CCGG	3 cut(s)	676, 1716, 1946
HgaI	GACGC	3 cut(s)	193, 1100, 1766
HhaI	GCGC	2 cut(s)	428, 1191
Hin1I	GRCGYC	1 cut(s)	204
Hin6I	GCGC	2 cut(s)	426, 1189
HinP1I	GCGC	2 cut(s)	426, 1189
HincII	GTYRAC	2 cut(s)	140, 208
HindII	GTYRAC	2 cut(s)	140, 208
HindIII	AAGCTT	1 cut(s)	1107
HinfI	GANTC	3 cut(s)	87, 1500, 2474
HpaII	CCGG	3 cut(s)	676, 1716, 1946
HphI	GGTGA	7 cut(s)	178, 449, 617, 1598, 1730, 2096, 2387
Hpy166II	GTNNAC	5 cut(s)	140, 208, 1713, 2325, 2668
Hpy188I	TCNGA	6 cut(s)	1225, 1915, 2129, 2156, 2624, 2682
Hpy8I	GTNNAC	5 cut(s)	140, 208, 1713, 2325, 2668
Hpy99I	CGWCG	2 cut(s)	194, 209
HpyCH4III	ACNGT	5 cut(s)	470, 576, 611, 1342, 2079
HpyCH4IV	ACGT	2 cut(s)	749, 958
HpyF10VI	GCNNNNNNNGC	6 cut(s)	201, 413, 937, 1386, 1832, 1881
HpyF3I	CTNAG	7 cut(s)	258, 329, 694, 1471, 1912, 2126, 2632
HpySE526I	ACGT	2 cut(s)	749, 958
Hsp92I	GRCGYC	1 cut(s)	204
HspAI	GCGC	2 cut(s)	426, 1189
Kpn2I	TCCGGA	1 cut(s)	1945
KpnI	GGTACC	1 cut(s)	1569
Ksp22I	TGATCA	1 cut(s)	2151
Kzo9I	GATC	7 cut(s)	895, 1220, 1588, 1632, 2060, 2151, 2287
LmnI	GCTCC	4 cut(s)	131, 412, 1011, 1959
Lsp1109I	GCAGC	3 cut(s)	110, 1389, 1462
LweI	GCATC	6 cut(s)	376, 766, 1822, 2004, 2227, 2320
MaeI	CTAG	4 cut(s)	828, 1041, 2589, 2601
MaeII	ACGT	2 cut(s)	749, 958
MaeIII	GTNAC	5 cut(s)	605, 616, 830, 1718, 1856
MalI	GATC	7 cut(s)	897, 1222, 1590, 1634, 2062, 2153, 2289
MboI	GATC	7 cut(s)	895, 1220, 1588, 1632, 2060, 2151, 2287
MfeI	CAATTG	1 cut(s)	2172
MflI	RGATCY	2 cut(s)	2060, 2287
MhlI	GDGCHC	4 cut(s)	409, 418, 1326, 2102
MlyI	GAGTC	1 cut(s)	1494
MmeI	TCCRAC	4 cut(s)	1471, 2331, 2492, 2660
MroI	TCCGGA	1 cut(s)	1945
MroXI	GAANNNNTTC	1 cut(s)	1791
MslI	CAYNNNNRTG	3 cut(s)	816, 1150, 2403
MspA1I	CMGCKG	2 cut(s)	1306, 1475
MspI	CCGG	3 cut(s)	676, 1716, 1946
MspR9I	CCNGG	4 cut(s)	411, 666, 1848, 2663
MunI	CAATTG	1 cut(s)	2172
Mva1269I	GAATGC	3 cut(s)	999, 1165, 2391
MvaI	CCWGG	4 cut(s)	411, 666, 1848, 2663
MwoI	GCNNNNNNNGC	6 cut(s)	201, 413, 937, 1386, 1832, 1881
NdeII	GATC	7 cut(s)	895, 1220, 1588, 1632, 2060, 2151, 2287
NlaIV	GGNNCC	5 cut(s)	408, 663, 1086, 1128, 1567
NmeAIII	GCCGAG	1 cut(s)	2095
NmuCI	GTSAC	3 cut(s)	605, 1718, 1856
NsbI	TGCGCA	2 cut(s)	427, 1190
NspV	TTCGAA	1 cut(s)	951
PctI	GAATGC	3 cut(s)	999, 1165, 2391
PdmI	GAANNNNTTC	1 cut(s)	1791
PfeI	GAWTC	2 cut(s)	87, 2474
PinAI	ACCGGT	2 cut(s)	675, 1715
PkrI	GCNGC	3 cut(s)	125, 1379, 1477
PleI	GAGTC	1 cut(s)	1494
PpsI	GAGTC	1 cut(s)	1494
Ppu21I	YACGTR	1 cut(s)	959
PpuMI	RGGWCCY	1 cut(s)	292
PshBI	ATTAAT	2 cut(s)	1985, 2159
Psp1406I	AACGTT	1 cut(s)	749
Psp5II	RGGWCCY	1 cut(s)	292
Psp6I	CCWGG	4 cut(s)	409, 664, 1846, 2661
PspFI	CCCAGC	1 cut(s)	2387
PspGI	CCWGG	4 cut(s)	409, 664, 1846, 2661
PspN4I	GGNNCC	5 cut(s)	408, 663, 1086, 1128, 1567
PspPI	GGNCC	6 cut(s)	292, 731, 740, 1046, 1948, 2438
PspPPI	RGGWCCY	1 cut(s)	292
PstI	CTGCAG	1 cut(s)	1480
PsuI	RGATCY	2 cut(s)	2060, 2287
PvuII	CAGCTG	2 cut(s)	1306, 1475
RseI	CAYNNNNRTG	3 cut(s)	816, 1150, 2403
SalI	GTCGAC	1 cut(s)	206
SatI	GCNGC	3 cut(s)	124, 1378, 1476
Sau3AI	GATC	7 cut(s)	895, 1220, 1588, 1632, 2060, 2151, 2287
Sau96I	GGNCC	6 cut(s)	292, 731, 740, 1046, 1948, 2438
ScaI	AGTACT	1 cut(s)	1733
SchI	GAGTC	1 cut(s)	1494
ScrFI	CCNGG	4 cut(s)	411, 666, 1848, 2663
SduI	GDGCHC	4 cut(s)	409, 418, 1326, 2102
SfaNI	GCATC	6 cut(s)	376, 766, 1822, 2004, 2227, 2320
SfcI	CTRYAG	1 cut(s)	1476
SfuI	TTCGAA	1 cut(s)	951
SinI	GGWCC	3 cut(s)	292, 740, 1948
SmiMI	CAYNNNNRTG	3 cut(s)	816, 1150, 2403
SmlI	CTYRAG	3 cut(s)	287, 1869, 1934
SmoI	CTYRAG	3 cut(s)	287, 1869, 1934
SsiI	CCGC	5 cut(s)	129, 691, 824, 1408, 1875
SspI	AATATT	2 cut(s)	309, 2585
SspMI	CTAG	4 cut(s)	828, 1041, 2589, 2601
StyD4I	CCNGG	4 cut(s)	409, 664, 1846, 2661
TaaI	ACNGT	5 cut(s)	470, 576, 611, 1342, 2079
TaiI	ACGT	2 cut(s)	752, 961
TaqI	TCGA	6 cut(s)	207, 234, 370, 951, 1616, 2331
TatI	WGTACW	6 cut(s)	564, 889, 1017, 1731, 1979, 2527
TfiI	GAWTC	2 cut(s)	87, 2474
TscAI	CASTG	7 cut(s)	435, 616, 1056, 1127, 1252, 1345, 1565
TseFI	GTSAC	3 cut(s)	605, 1718, 1856
TseI	GCWGC	3 cut(s)	123, 1377, 1475
Tsp45I	GTSAC	3 cut(s)	605, 1718, 1856
TspGWI	ACGGA	5 cut(s)	257, 314, 1652, 2552, 2568
TspRI	CASTG	7 cut(s)	435, 616, 1056, 1127, 1252, 1345, 1565
VpaK11BI	GGWCC	3 cut(s)	292, 740, 1948
VspI	ATTAAT	2 cut(s)	1985, 2159
XapI	RAATTY	4 cut(s)	230, 914, 1618, 2210
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2048, 2612
XmiI	GTMKAC	1 cut(s)	207
XmnI	GAANNNNTTC	1 cut(s)	1791
XspI	CTAG	4 cut(s)	828, 1041, 2589, 2601
ZrmI	AGTACT	1 cut(s)	1733

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.