Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000416.1

Orthogroup ID

OG0003672

Physical Location & Seq

Genomic Coordinates Reverse (-)

11516 .. 19179

Gene Structure 7664 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000416.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

atggcttcactttcactttcaaccaagttccctctgtaccccaacctcacatttctccaattccagtacccaaacagacctcaaagaatcatctttcctgtcaagaagacaacccagataggctgctccgccacaggtcaaccccaccaacaacaaagaccacccaagaacaagaagaaaatcctcaccgacggcgacaaaggcgtcgacccagttggcttcctctccaaattcgacatctcccataagcaatttgctcagttcctccgtgaaagacacaaagccctcaaggacctgacggatgaaatattaactcgccacatcaacctcagggatatgtcttctggatatgagatattgggtttgcatcgacacccagaacatagagaggattatatggagtgggctccaggtgctcgctactgcgcactggttggtgatttcaatgggtggtctcccacagagaactgtgcaaaagagggtcattttggacatgatgactatggatactggttcatcattcttgaagataagttgaggaatggagagaaaccagatgagctgtactttcaacagtataactatgtagatgattacgataaaggtgacagtggtgttactattgaagaagtctttaagaaggcaaatgatgagtattgggaacctggagaagaccggtttctaaaaaaccgcttagaagtaccagcaaaattgtatgagcagatttttgggcctaatggacctcaaacgttagaggaacttgaagaaataccagatgcagaaacaagatataaagtgtggaaagaacagcataaagatgacccgcctagtaacttaccttcttatgatgtgattgacaatggaaaagagtatgacatttacaatgttgtacttgatccagtatcacaagagaaatttaaagcaaagaagcctcccttgccatattggttcgaaacacgtaaaggaaggaaggcatggttgaaaaagtataggccgtgcattcctcatgggagcaagtacagggtctattttaatactcctagtgggccactggaacgagtacctgcttgggcaacttatgtggaaccagacgcagatggaggacaagcttttgcaatccactgggaaccacccccagaacttgcatacaaatggaagaatgcacgccctaaagtgccaaagtccctgcgcatttatgaatgtcatgttggcataagtggatcagagcctaaagtatcttctttcagtgatttcacagagaaggttcttcctcatgtaaaggaggctggctataatgcaattcagctgattggagttattgagcacaaagattatttcactgttggttatagagccactaatttatatgctgttagcagccgatttggcactcctgatgatttcaagcggttggttgatgaagcacatggacaaggactgctggtcttcttggagattgtccattcctactcagctgcagatgagatggttggattaggactctttgatggaacaaatgactgctacttccatactggcaaacggggacatcacaagcactggggtaccagaatgtttaaatatggtgatctggatgttctgcatttccttctctcgaatttgaactggtggatcacggagtaccaagttgatggttttcagttccattcactctcatcaatgatttatactcataatggttttgcttcgtttaccggtgacttggaggagtactgcaatcaatatgttgatagggacgcattgttatacctcattttggcaaacgaaatacttcatgctctccacccagatataataacgattgctgaagatgcaaccttctatccggtgtatgtgaaccaatctctcaaggcggattgggctttgattattgtgtcaatctttctgtctcagagatgtgtggacattcattatgttcaacccactctgcagattgtgagtacattaatgggcaacaaaagttatgcagataagatgctcatgtatgctgaaaatcataaccagtcaatttctggagggagatcttttgctgagatactgtttggtgaaatcagggagggctctcctgacaaggagaaattattgctcagaggttgttccttgcacaagatgatcagattaattaccatgacaattggtggccgtgcttatctcaacttcatgggcaatgaatttgggcatccagagagggttgagttcccaatgccaagcaacaatttctcattttctcttgccaaccgaaggtgggatcttcttgccaacaagggattgcatctcaacttgtttacctttgataaggtatcaactgctaacaatttatttccatattattatctttacatgctacatcttgtggttctggctctctttctgtgtcatctggctctgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0007275 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009791 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0048856 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 map00500 map01100 map01110

Pfam Domains

Protein Families

Alpha-amylase Alpha-amylase_C CBM_48

Protein Analysis

803

Amino Acids

92.74

Weight (kDa)

6.22

Isoelectric Point (pI)

36.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003672)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20440 AT3G20440 AT3G20440
fragaria_vesca	FvH4_3g23220 FvH4_3g23220 FvH4_3g23220 FvH4_3g23220 FvH4_3g23220 FvH4_3g23220 FvH4_3g23220 FvH4_3g23220 FvH4_3g23220
malus_domestica	MD11G1212700.v1.1
prunus_persica	Prupe.4G219000_v2.0.a1 Prupe.4G219000_v2.0.a1 Prupe.4G219000_v2.0.a1 Prupe.4G219000_v2.0.a1 Prupe.4G219000_v2.0.a1 Prupe.4G219000_v2.0.a1 Prupe.4G219000_v2.0.a1
pyrus_communis	pycom11g18770
rosa_chinensis	RchiOBHm_Chr5g0040901 RchiOBHm_Chr5g0040911
rosa_laevigata	RLG00000034012
rosa_multiflora	Rmu_sc0002848.1_g000016 Rmu_ssc0000416.1_g000003
rosa_roxburghii	Rroxscaffold_1G00039790
rosa_rugosa	Rorug05G0188500 Rorug05G0188600 Rorug05G0188600
rosa_samantha	Rh5AG274100 Rh5BG279100 Rh5CG311200 Rh5DG287300
rosa_wichuraiana	Rw5G025750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	203
Acc16I	TGCGCA	2 cut(s)	427, 1190
Acc36I	ACCTGC	1 cut(s)	1072
Acc65I	GGTACC	1 cut(s)	1565
AccB1I	GGYRCC	1 cut(s)	1565
AccI	GTMKAC	1 cut(s)	207
AciI	CCGC	5 cut(s)	129, 691, 824, 1408, 1874
AclI	AACGTT	1 cut(s)	749
AclWI	GGATC	4 cut(s)	890, 1228, 1640, 2277
AcoI	YGGCCR	1 cut(s)	2161
AcsI	RAATTY	4 cut(s)	230, 914, 1618, 2192
AcuI	CTGAAG	1 cut(s)	1848
AcyI	GRCGYC	1 cut(s)	204
AfiI	CCNNNNNNNGG	3 cut(s)	1777, 2262, 2266
AflIII	ACRYGT	1 cut(s)	956
AgeI	ACCGGT	2 cut(s)	675, 1715
AhdI	GACNNNNNGTC	1 cut(s)	1442
AjnI	CCWGG	2 cut(s)	409, 664
AjuI	GAANNNNNNNTTGG	2 cut(s)	1191, 1223
AluBI	AGCT	4 cut(s)	562, 1109, 1306, 1475
AluI	AGCT	4 cut(s)	562, 1109, 1306, 1475
Alw21I	GWGCWC	2 cut(s)	418, 1326
Alw26I	GTCTC	2 cut(s)	459, 1914
AlwI	GGATC	4 cut(s)	890, 1228, 1640, 2277
AoxI	GGCC	4 cut(s)	731, 992, 1046, 2161
ApeKI	GCWGC	3 cut(s)	123, 1377, 1475
ApoI	RAATTY	4 cut(s)	230, 914, 1618, 2192
AseI	ATTAAT	2 cut(s)	1967, 2141
AsiGI	ACCGGT	2 cut(s)	675, 1715
Asp700I	GAANNNNTTC	1 cut(s)	1791
Asp718I	GGTACC	1 cut(s)	1565
AspLEI	GCGC	2 cut(s)	428, 1191
AspS9I	GGNCC	4 cut(s)	292, 731, 740, 1046
AsuHPI	GGTGA	6 cut(s)	178, 449, 617, 1598, 1730, 2078
AsuII	TTCGAA	1 cut(s)	951
AvaII	GGWCC	2 cut(s)	292, 740
AxyI	CCTNAGG	1 cut(s)	329
BaeI	ACNNNNGTAYC	2 cut(s)	1549, 1582
BanI	GGYRCC	1 cut(s)	1565
BanII	GRGCYC	2 cut(s)	409, 2084
BarI	GAAGNNNNNNTAC	2 cut(s)	823, 855
BbsI	GAAGAC	4 cut(s)	113, 333, 678, 1438
Bbv12I	GWGCWC	2 cut(s)	418, 1326
BbvI	GCAGC	3 cut(s)	110, 1389, 1462
BccI	CCATC	4 cut(s)	1091, 1480, 1502, 1646
BceAI	ACGGC	3 cut(s)	208, 979, 2148
BciT130I	CCWGG	2 cut(s)	411, 666
BciVI	GTATCC	1 cut(s)	500
BclI	TGATCA	1 cut(s)	2133
BcoDI	GTCTC	2 cut(s)	459, 1914
BfaI	CTAG	2 cut(s)	828, 1041
BfmI	CTRYAG	2 cut(s)	1476, 1949
BfuAI	ACCTGC	1 cut(s)	1072
BfuI	GTATCC	1 cut(s)	500
BglI	GCCNNNNNGGC	1 cut(s)	1386
BglII	AGATCT	1 cut(s)	2042
BisI	GCNGC	3 cut(s)	124, 1378, 1476
BlsI	GCNGC	3 cut(s)	125, 1379, 1477
BmcAI	AGTACT	1 cut(s)	1733
Bme1390I	CCNGG	2 cut(s)	411, 666
Bme18I	GGWCC	2 cut(s)	292, 740
BmeRI	GACNNNNNGTC	1 cut(s)	1442
BmgT120I	GGNCC	4 cut(s)	292, 731, 740, 1046
BmiI	GGNNCC	5 cut(s)	408, 663, 1086, 1128, 1567
BmrFI	CCNGG	2 cut(s)	411, 666
BmrI	ACTGGG	3 cut(s)	206, 1132, 1570
BmsI	GCATC	6 cut(s)	376, 766, 1822, 1986, 2209, 2302
BmuI	ACTGGG	3 cut(s)	206, 1132, 1570
BpiI	GAAGAC	4 cut(s)	113, 333, 678, 1438
BpmI	CTGGAG	3 cut(s)	393, 687, 2055
Bpu14I	TTCGAA	1 cut(s)	951
BpuEI	CTTGAG	2 cut(s)	272, 1853
BsaAI	YACGTR	1 cut(s)	959
BsaHI	GRCGYC	1 cut(s)	204
BsaI	GGTCTC	1 cut(s)	459
BsaWI	WCCGGW	3 cut(s)	675, 1715, 1846
Bsc4I	CCNNNNNNNGG	3 cut(s)	1777, 2262, 2266
Bse118I	RCCGGY	2 cut(s)	675, 1715
Bse21I	CCTNAGG	1 cut(s)	329
Bse3DI	GCAATG	1 cut(s)	2194
BseBI	CCWGG	2 cut(s)	411, 666
BseGI	GGATG	3 cut(s)	307, 1600, 2200
BseLI	CCNNNNNNNGG	3 cut(s)	1777, 2262, 2266
BseMI	GCAATG	1 cut(s)	2194
BseMII	CTCAG	6 cut(s)	272, 343, 1485, 1925, 2043, 2122
BseRI	GAGGAG	1 cut(s)	1742
BseXI	GCAGC	3 cut(s)	110, 1389, 1462
BshFI	GGCC	4 cut(s)	733, 994, 1048, 2163
BshNI	GGYRCC	1 cut(s)	1565
BshTI	ACCGGT	2 cut(s)	675, 1715
BsiHKAI	GWGCWC	2 cut(s)	418, 1326
BsiSI	CCGG	3 cut(s)	676, 1716, 1847
BslFI	GGGAC	3 cut(s)	1168, 1560, 1769
BslI	CCNNNNNNNGG	3 cut(s)	1777, 2262, 2266
BsmAI	GTCTC	2 cut(s)	459, 1914
BsmFI	GGGAC	3 cut(s)	1168, 1560, 1769
BsmI	GAATGC	2 cut(s)	999, 1165
BsnI	GGCC	4 cut(s)	733, 994, 1048, 2163
Bso31I	GGTCTC	1 cut(s)	459
Bsp119I	TTCGAA	1 cut(s)	951
Bsp1286I	GDGCHC	4 cut(s)	409, 418, 1326, 2084
Bsp143I	GATC	7 cut(s)	895, 1220, 1588, 1632, 2042, 2133, 2269
BspACI	CCGC	5 cut(s)	129, 691, 824, 1408, 1874
BspANI	GGCC	4 cut(s)	733, 994, 1048, 2163
BspCNI	CTCAG	6 cut(s)	271, 342, 1484, 1924, 2044, 2121
BspLI	GGNNCC	5 cut(s)	408, 663, 1086, 1128, 1567
BspMAI	CTGCAG	2 cut(s)	1480, 1953
BspMI	ACCTGC	1 cut(s)	1072
BspPI	GGATC	4 cut(s)	890, 1228, 1640, 2277
BspT104I	TTCGAA	1 cut(s)	951
BspT107I	GGYRCC	1 cut(s)	1565
BspTNI	GGTCTC	1 cut(s)	459
BsrDI	GCAATG	1 cut(s)	2194
BsrFI	RCCGGY	2 cut(s)	675, 1715
BssAI	RCCGGY	2 cut(s)	675, 1715
BssMI	GATC	7 cut(s)	895, 1220, 1588, 1632, 2042, 2133, 2269
BssNI	GRCGYC	1 cut(s)	204
Bst2UI	CCWGG	2 cut(s)	411, 666
Bst4CI	ACNGT	5 cut(s)	470, 576, 611, 1342, 2061
BstACI	GRCGYC	1 cut(s)	204
BstBAI	YACGTR	1 cut(s)	959
BstBI	TTCGAA	1 cut(s)	951
BstC8I	GCNNGC	3 cut(s)	418, 1165, 1288
BstDEI	CTNAG	7 cut(s)	258, 329, 694, 1471, 1911, 2052, 2108
BstF5I	GGATG	3 cut(s)	307, 1600, 2200
BstHHI	GCGC	2 cut(s)	428, 1191
BstKTI	GATC	7 cut(s)	898, 1223, 1591, 1635, 2045, 2136, 2272
BstMAI	GTCTC	2 cut(s)	459, 1914
BstMBI	GATC	7 cut(s)	895, 1220, 1588, 1632, 2042, 2133, 2269
BstMWI	GCNNNNNNNGC	6 cut(s)	201, 413, 937, 1386, 1832, 1880
BstNI	CCWGG	2 cut(s)	411, 666
BstNSI	RCATGY	1 cut(s)	2365
BstSCI	CCNGG	2 cut(s)	409, 664
BstSFI	CTRYAG	2 cut(s)	1476, 1949
BstV1I	GCAGC	3 cut(s)	110, 1389, 1462
BstV2I	GAAGAC	4 cut(s)	113, 333, 678, 1438
BstX2I	RGATCY	2 cut(s)	2042, 2269
BstXI	CCANNNNNNTGG	1 cut(s)	1652
BstYI	RGATCY	2 cut(s)	2042, 2269
Bsu36I	CCTNAGG	1 cut(s)	329
BsuI	GTATCC	1 cut(s)	500
BsuRI	GGCC	4 cut(s)	733, 994, 1048, 2163
BtsCI	GGATG	3 cut(s)	307, 1600, 2200
BtsIMutI	CAGTG	7 cut(s)	428, 616, 1049, 1120, 1252, 1338, 1558
BveI	ACCTGC	1 cut(s)	1072
Cac8I	GCNNGC	3 cut(s)	418, 1165, 1288
CfoI	GCGC	2 cut(s)	428, 1191
Cfr10I	RCCGGY	2 cut(s)	675, 1715
Cfr13I	GGNCC	4 cut(s)	292, 731, 740, 1046
CseI	GACGC	3 cut(s)	193, 1100, 1766
CspAI	ACCGGT	2 cut(s)	675, 1715
CspCI	CAANNNNNGTGG	2 cut(s)	1062, 1097
DdeI	CTNAG	7 cut(s)	258, 329, 694, 1471, 1911, 2052, 2108
DpnI	GATC	7 cut(s)	897, 1222, 1590, 1634, 2044, 2135, 2271
DpnII	GATC	7 cut(s)	895, 1220, 1588, 1632, 2042, 2133, 2269
DraI	TTTAAA	2 cut(s)	919, 1579
DrdI	GACNNNNNNGTC	1 cut(s)	203
DriI	GACNNNNNGTC	1 cut(s)	1442
DseDI	GACNNNNNNGTC	1 cut(s)	203
EaeI	YGGCCR	1 cut(s)	2161
Eam1105I	GACNNNNNGTC	1 cut(s)	1442
EciI	GGCGGA	2 cut(s)	118, 1889
Eco24I	GRGCYC	2 cut(s)	409, 2084
Eco31I	GGTCTC	1 cut(s)	459
Eco47I	GGWCC	2 cut(s)	292, 740
Eco57I	CTGAAG	1 cut(s)	1848
Eco81I	CCTNAGG	1 cut(s)	329
EcoO109I	RGGNCCY	1 cut(s)	292
EcoRII	CCWGG	2 cut(s)	409, 664
EcoT38I	GRGCYC	2 cut(s)	409, 2084
FalI	AAGNNNNNCTT	2 cut(s)	920, 952
FaqI	GGGAC	3 cut(s)	1168, 1560, 1769
FauI	CCCGC	1 cut(s)	831
FbaI	TGATCA	1 cut(s)	2133
FblI	GTMKAC	1 cut(s)	207
Fnu4HI	GCNGC	3 cut(s)	124, 1378, 1476
FokI	GGATG	3 cut(s)	314, 1607, 2187
FriOI	GRGCYC	2 cut(s)	409, 2084
Fsp4HI	GCNGC	3 cut(s)	124, 1378, 1476
FspBI	CTAG	2 cut(s)	828, 1041
FspI	TGCGCA	2 cut(s)	427, 1190
GlaI	GCGC	2 cut(s)	427, 1190
GluI	GCNGC	3 cut(s)	124, 1378, 1476
GsuI	CTGGAG	3 cut(s)	393, 687, 2055
HaeIII	GGCC	4 cut(s)	733, 994, 1048, 2163
HapII	CCGG	3 cut(s)	676, 1716, 1847
HgaI	GACGC	3 cut(s)	193, 1100, 1766
HhaI	GCGC	2 cut(s)	428, 1191
Hin1I	GRCGYC	1 cut(s)	204
Hin6I	GCGC	2 cut(s)	426, 1189
HinP1I	GCGC	2 cut(s)	426, 1189
HincII	GTYRAC	2 cut(s)	140, 208
HindII	GTYRAC	2 cut(s)	140, 208
HindIII	AAGCTT	1 cut(s)	1107
HinfI	GANTC	2 cut(s)	87, 1500
HpaII	CCGG	3 cut(s)	676, 1716, 1847
HphI	GGTGA	6 cut(s)	178, 449, 617, 1598, 1730, 2078
Hpy166II	GTNNAC	6 cut(s)	140, 208, 1713, 1858, 1924, 2307
Hpy188I	TCNGA	4 cut(s)	1225, 1914, 2111, 2138
Hpy188III	TCNNGA	9 cut(s)	103, 345, 524, 1394, 1592, 1615, 2034, 2087, 2204
Hpy8I	GTNNAC	6 cut(s)	140, 208, 1713, 1858, 1924, 2307
Hpy99I	CGWCG	2 cut(s)	194, 209
HpyAV	CCTTC	8 cut(s)	634, 849, 960, 964, 1255, 1619, 1849, 2256
HpyCH4III	ACNGT	5 cut(s)	470, 576, 611, 1342, 2061
HpyCH4IV	ACGT	2 cut(s)	749, 958
HpyF10VI	GCNNNNNNNGC	6 cut(s)	201, 413, 937, 1386, 1832, 1880
HpyF3I	CTNAG	7 cut(s)	258, 329, 694, 1471, 1911, 2052, 2108
HpySE526I	ACGT	2 cut(s)	749, 958
Hsp92I	GRCGYC	1 cut(s)	204
HspAI	GCGC	2 cut(s)	426, 1189
KpnI	GGTACC	1 cut(s)	1569
Ksp22I	TGATCA	1 cut(s)	2133
Kzo9I	GATC	7 cut(s)	895, 1220, 1588, 1632, 2042, 2133, 2269
LmnI	GCTCC	3 cut(s)	131, 412, 1011
Lsp1109I	GCAGC	3 cut(s)	110, 1389, 1462
LweI	GCATC	6 cut(s)	376, 766, 1822, 1986, 2209, 2302
MaeI	CTAG	2 cut(s)	828, 1041
MaeII	ACGT	2 cut(s)	749, 958
MaeIII	GTNAC	4 cut(s)	605, 616, 830, 1718
MalI	GATC	7 cut(s)	897, 1222, 1590, 1634, 2044, 2135, 2271
MboI	GATC	7 cut(s)	895, 1220, 1588, 1632, 2042, 2133, 2269
MfeI	CAATTG	1 cut(s)	2154
MflI	RGATCY	2 cut(s)	2042, 2269
MhlI	GDGCHC	4 cut(s)	409, 418, 1326, 2084
MlyI	GAGTC	1 cut(s)	1494
MmeI	TCCRAC	1 cut(s)	1471
MroXI	GAANNNNTTC	1 cut(s)	1791
MseI	TTAA	7 cut(s)	311, 636, 918, 1032, 1578, 1967, 2141
MslI	CAYNNNNRTG	2 cut(s)	816, 1150
MspA1I	CMGCKG	2 cut(s)	1306, 1475
MspI	CCGG	3 cut(s)	676, 1716, 1847
MspR9I	CCNGG	2 cut(s)	411, 666
MunI	CAATTG	1 cut(s)	2154
Mva1269I	GAATGC	2 cut(s)	999, 1165
MvaI	CCWGG	2 cut(s)	411, 666
MwoI	GCNNNNNNNGC	6 cut(s)	201, 413, 937, 1386, 1832, 1880
NdeII	GATC	7 cut(s)	895, 1220, 1588, 1632, 2042, 2133, 2269
NlaIV	GGNNCC	5 cut(s)	408, 663, 1086, 1128, 1567
NmuCI	GTSAC	2 cut(s)	605, 1718
NsbI	TGCGCA	2 cut(s)	427, 1190
NspI	RCATGY	1 cut(s)	2365
NspV	TTCGAA	1 cut(s)	951
PctI	GAATGC	2 cut(s)	999, 1165
PdmI	GAANNNNTTC	1 cut(s)	1791
PfeI	GAWTC	1 cut(s)	87
PinAI	ACCGGT	2 cut(s)	675, 1715
PkrI	GCNGC	3 cut(s)	125, 1379, 1477
PleI	GAGTC	1 cut(s)	1494
PpsI	GAGTC	1 cut(s)	1494
Ppu21I	YACGTR	1 cut(s)	959
PpuMI	RGGWCCY	1 cut(s)	292
PshBI	ATTAAT	2 cut(s)	1967, 2141
Psp1406I	AACGTT	1 cut(s)	749
Psp5II	RGGWCCY	1 cut(s)	292
Psp6I	CCWGG	2 cut(s)	409, 664
PspGI	CCWGG	2 cut(s)	409, 664
PspN4I	GGNNCC	5 cut(s)	408, 663, 1086, 1128, 1567
PspPI	GGNCC	4 cut(s)	292, 731, 740, 1046
PspPPI	RGGWCCY	1 cut(s)	292
PstI	CTGCAG	2 cut(s)	1480, 1953
PsuI	RGATCY	2 cut(s)	2042, 2269
PvuII	CAGCTG	2 cut(s)	1306, 1475
RseI	CAYNNNNRTG	2 cut(s)	816, 1150
SalI	GTCGAC	1 cut(s)	206
SaqAI	TTAA	7 cut(s)	311, 636, 918, 1032, 1578, 1967, 2141
SatI	GCNGC	3 cut(s)	124, 1378, 1476
Sau3AI	GATC	7 cut(s)	895, 1220, 1588, 1632, 2042, 2133, 2269
Sau96I	GGNCC	4 cut(s)	292, 731, 740, 1046
ScaI	AGTACT	1 cut(s)	1733
SchI	GAGTC	1 cut(s)	1494
ScrFI	CCNGG	2 cut(s)	411, 666
SduI	GDGCHC	4 cut(s)	409, 418, 1326, 2084
SfaNI	GCATC	6 cut(s)	376, 766, 1822, 1986, 2209, 2302
SfcI	CTRYAG	2 cut(s)	1476, 1949
SfuI	TTCGAA	1 cut(s)	951
SinI	GGWCC	2 cut(s)	292, 740
SmiMI	CAYNNNNRTG	2 cut(s)	816, 1150
SmlI	CTYRAG	2 cut(s)	287, 1868
SmoI	CTYRAG	2 cut(s)	287, 1868
SsiI	CCGC	5 cut(s)	129, 691, 824, 1408, 1874
SspI	AATATT	1 cut(s)	309
SspMI	CTAG	2 cut(s)	828, 1041
StyD4I	CCNGG	2 cut(s)	409, 664
TaaI	ACNGT	5 cut(s)	470, 576, 611, 1342, 2061
TaiI	ACGT	2 cut(s)	752, 961
TaqI	TCGA	5 cut(s)	207, 234, 370, 951, 1616
TatI	WGTACW	5 cut(s)	564, 889, 1017, 1731, 1961
TfiI	GAWTC	1 cut(s)	87
Tru1I	TTAA	7 cut(s)	311, 636, 918, 1032, 1578, 1967, 2141
Tru9I	TTAA	7 cut(s)	311, 636, 918, 1032, 1578, 1967, 2141
TscAI	CASTG	7 cut(s)	435, 616, 1056, 1127, 1252, 1345, 1565
TseFI	GTSAC	2 cut(s)	605, 1718
TseI	GCWGC	3 cut(s)	123, 1377, 1475
Tsp45I	GTSAC	2 cut(s)	605, 1718
TspDTI	ATGAA	8 cut(s)	318, 505, 1212, 1434, 1784, 1919, 2170, 2205
TspGWI	ACGGA	3 cut(s)	257, 314, 1652
TspRI	CASTG	7 cut(s)	435, 616, 1056, 1127, 1252, 1345, 1565
VpaK11BI	GGWCC	2 cut(s)	292, 740
VspI	ATTAAT	2 cut(s)	1967, 2141
XapI	RAATTY	4 cut(s)	230, 914, 1618, 2192
XceI	RCATGY	1 cut(s)	2365
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2030
XmiI	GTMKAC	1 cut(s)	207
XmnI	GAANNNNTTC	1 cut(s)	1791
XspI	CTAG	2 cut(s)	828, 1041
ZrmI	AGTACT	1 cut(s)	1733

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.