Rmu_sc0002882.1_g000016

F-actin-capping proteins bind in a Ca(2 )-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002882.1
Physical Location & Seq
Forward (+)
44549 .. 45971
1423 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002882.1_g000016.1.cds

Sequence Viewer

Length: 420 bp
atggagccgccccagttgccaaaccctagtccggcaggcctcgatgtgaagccttcgtcggcggccaagttgaatattctgttgccgccatggccacggccattaaatcctctcaaactgaagcttgagatgcttcctgagaactccgcccatggagcctctgattccggcgtcccggtttgtacagacgtgagacctgcattggataaggaacttccatccgcatatgttgaggaatacaggtgtgctttggatggagaaatacttagatatgtgggtgaagcttatccaaaaggggtctgctcagtgtattgtgggaatggtaaagatgcagatgacaggacccgccccggatttcaccctgaaatccgaagaggccctgcggggcccaccttagaagaaattctaccaaaaatttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

139

Amino Acids

15.05

Weight (kDa)

5.41

Isoelectric Point (pI)

53.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 205
AciI CCGC 7 cut(s) 8, 62, 86, 147, 222, 346, 383
AcoI YGGCCR 3 cut(s) 63, 92, 98
AcsI RAATTY 2 cut(s) 402, 414
AcuI CTGAAG 1 cut(s) 140
AcyI GRCGYC 1 cut(s) 171
AfaI GTAC 1 cut(s) 184
AfiI CCNNNNNNNGG 1 cut(s) 31
AgsI TTSAA 1 cut(s) 73
AjiI CACGTC 1 cut(s) 190
AluBI AGCT 2 cut(s) 124, 284
AluI AGCT 2 cut(s) 124, 284
Alw26I GTCTC 1 cut(s) 187
AoxI GGCC 6 cut(s) 37, 63, 92, 98, 376, 386
ApaI GGGCCC 1 cut(s) 390
ApoI RAATTY 2 cut(s) 402, 414
Asp700I GAANNNNTTC 1 cut(s) 402
AspS9I GGNCC 4 cut(s) 342, 377, 386, 387
AsuC2I CCSGG 2 cut(s) 176, 351
AsuHPI GGTGA 2 cut(s) 290, 350
AvaII GGWCC 1 cut(s) 342
BaeGI GKGCMC 1 cut(s) 390
BalI TGGCCA 1 cut(s) 94
BanII GRGCYC 1 cut(s) 390
BarI GAAGNNNNNNTAC 1 cut(s) 390
BccI CCATC 2 cut(s) 226, 248
BceAI ACGGC 1 cut(s) 113
BcnI CCSGG 2 cut(s) 176, 351
BcoDI GTCTC 1 cut(s) 187
BfaI CTAG 1 cut(s) 27
BfuAI ACCTGC 1 cut(s) 205
BglI GCCNNNNNGGC 1 cut(s) 91
BisI GCNGC 3 cut(s) 8, 63, 86
BlsI GCNGC 3 cut(s) 9, 64, 87
Bme1390I CCNGG 2 cut(s) 176, 351
Bme18I GGWCC 1 cut(s) 342
BmgBI CACGTC 1 cut(s) 190
BmgT120I GGNCC 4 cut(s) 342, 377, 386, 387
BmiI GGNNCC 5 cut(s) 6, 157, 344, 387, 388
BmrFI CCNGG 2 cut(s) 176, 351
BmrI ACTGGG 1 cut(s) 7
BmsI GCATC 2 cut(s) 120, 319
BmuI ACTGGG 1 cut(s) 7
BpuEI CTTGAG 1 cut(s) 146
BpuMI CCSGG 2 cut(s) 176, 351
BsaHI GRCGYC 1 cut(s) 171
BsaI GGTCTC 1 cut(s) 187
BsaJI CCNNGG 4 cut(s) 89, 95, 151, 349
Bsc4I CCNNNNNNNGG 1 cut(s) 31
Bse1I ACTGG 1 cut(s) 13
BseDI CCNNGG 4 cut(s) 89, 95, 151, 349
BseGI GGATG 2 cut(s) 218, 259
BseLI CCNNNNNNNGG 1 cut(s) 31
BseMII CTCAG 2 cut(s) 129, 318
BseNI ACTGG 1 cut(s) 13
BseSI GKGCMC 1 cut(s) 390
BshFI GGCC 6 cut(s) 39, 65, 94, 100, 378, 388
BsiSI CCGG 4 cut(s) 32, 168, 176, 351
BslFI GGGAC 1 cut(s) 158
BslI CCNNNNNNNGG 1 cut(s) 31
BsmAI GTCTC 1 cut(s) 187
BsmFI GGGAC 1 cut(s) 158
BsnI GGCC 6 cut(s) 39, 65, 94, 100, 378, 388
Bso31I GGTCTC 1 cut(s) 187
Bsp120I GGGCCC 1 cut(s) 386
Bsp1286I GDGCHC 1 cut(s) 390
Bsp1407I TGTACA 1 cut(s) 182
Bsp19I CCATGG 2 cut(s) 89, 151
BspACI CCGC 7 cut(s) 8, 62, 86, 147, 222, 346, 383
BspANI GGCC 6 cut(s) 39, 65, 94, 100, 378, 388
BspCNI CTCAG 2 cut(s) 130, 317
BspLI GGNNCC 5 cut(s) 6, 157, 344, 387, 388
BspMI ACCTGC 1 cut(s) 205
BspTNI GGTCTC 1 cut(s) 187
BsrGI TGTACA 1 cut(s) 182
BsrI ACTGG 1 cut(s) 13
BssECI CCNNGG 4 cut(s) 89, 95, 151, 349
BssNI GRCGYC 1 cut(s) 171
BssT1I CCWWGG 2 cut(s) 89, 151
Bst6I CTCTTC 1 cut(s) 367
BstACI GRCGYC 1 cut(s) 171
BstAUI TGTACA 1 cut(s) 182
BstC8I GCNNGC 1 cut(s) 37
BstDEI CTNAG 4 cut(s) 138, 266, 304, 394
BstDSI CCRYGG 3 cut(s) 89, 95, 151
BstF5I GGATG 2 cut(s) 218, 259
BstMAI GTCTC 1 cut(s) 187
BstMWI GCNNNNNNNGC 4 cut(s) 16, 91, 130, 155
BstSCI CCNGG 2 cut(s) 174, 349
BstSLI GKGCMC 1 cut(s) 390
BsuRI GGCC 6 cut(s) 39, 65, 94, 100, 378, 388
BtgI CCRYGG 3 cut(s) 89, 95, 151
BtrI CACGTC 1 cut(s) 190
BtsCI GGATG 2 cut(s) 218, 259
BtsIMutI CAGTG 1 cut(s) 312
BveI ACCTGC 1 cut(s) 205
Cac8I GCNNGC 1 cut(s) 37
Cfr13I GGNCC 4 cut(s) 342, 377, 386, 387
CseI GACGC 1 cut(s) 160
Csp6I GTAC 1 cut(s) 183
CviAII CATG 2 cut(s) 90, 152
CviQI GTAC 1 cut(s) 183
DdeI CTNAG 4 cut(s) 138, 266, 304, 394
EaeI YGGCCR 3 cut(s) 63, 92, 98
Eam1104I CTCTTC 1 cut(s) 367
EarI CTCTTC 1 cut(s) 367
EciI GGCGGA 1 cut(s) 136
Eco130I CCWWGG 2 cut(s) 89, 151
Eco147I AGGCCT 1 cut(s) 39
Eco24I GRGCYC 1 cut(s) 390
Eco31I GGTCTC 1 cut(s) 187
Eco47I GGWCC 1 cut(s) 342
Eco57I CTGAAG 1 cut(s) 140
EcoO109I RGGNCCY 3 cut(s) 342, 377, 386
EcoT14I CCWWGG 2 cut(s) 89, 151
EcoT38I GRGCYC 1 cut(s) 390
ErhI CCWWGG 2 cut(s) 89, 151
FaeI CATG 2 cut(s) 93, 155
FaiI YATR 5 cut(s) 91, 153, 226, 228, 273
FaqI GGGAC 1 cut(s) 158
FatI CATG 2 cut(s) 89, 151
FauI CCCGC 2 cut(s) 353, 376
FauNDI CATATG 1 cut(s) 226
Fnu4HI GCNGC 3 cut(s) 8, 63, 86
FokI GGATG 2 cut(s) 205, 266
FriOI GRGCYC 1 cut(s) 390
Fsp4HI GCNGC 3 cut(s) 8, 63, 86
FspBI CTAG 1 cut(s) 27
GluI GCNGC 3 cut(s) 8, 63, 86
HaeIII GGCC 6 cut(s) 39, 65, 94, 100, 378, 388
HapII CCGG 4 cut(s) 32, 168, 176, 351
HgaI GACGC 1 cut(s) 160
Hin1I GRCGYC 1 cut(s) 171
Hin1II CATG 2 cut(s) 93, 155
HindIII AAGCTT 2 cut(s) 122, 282
HinfI GANTC 1 cut(s) 164
HpaII CCGG 4 cut(s) 32, 168, 176, 351
HphI GGTGA 2 cut(s) 290, 350
Hpy188I TCNGA 2 cut(s) 163, 371
Hpy188III TCNNGA 1 cut(s) 137
Hpy99I CGWCG 1 cut(s) 61
HpyAV CCTTC 1 cut(s) 63
HpyCH4IV ACGT 1 cut(s) 189
HpyCH4V TGCA 2 cut(s) 200, 332
HpyF10VI GCNNNNNNNGC 4 cut(s) 16, 91, 130, 155
HpyF3I CTNAG 4 cut(s) 138, 266, 304, 394
HpySE526I ACGT 1 cut(s) 189
Hsp92I GRCGYC 1 cut(s) 171
Hsp92II CATG 2 cut(s) 93, 155
LmnI GCTCC 2 cut(s) 4, 155
LweI GCATC 2 cut(s) 120, 319
MaeI CTAG 1 cut(s) 27
MaeII ACGT 1 cut(s) 189
MboII GAAGA 2 cut(s) 384, 410
MhlI GDGCHC 1 cut(s) 390
MlsI TGGCCA 1 cut(s) 94
MluCI AATT 2 cut(s) 402, 414
MluNI TGGCCA 1 cut(s) 94
MnlI CCTC 5 cut(s) 50, 120, 169, 226, 368
Mox20I TGGCCA 1 cut(s) 94
MroXI GAANNNNTTC 1 cut(s) 402
MscI TGGCCA 1 cut(s) 94
MseI TTAA 1 cut(s) 104
Msp20I TGGCCA 1 cut(s) 94
MspI CCGG 4 cut(s) 32, 168, 176, 351
MspR9I CCNGG 2 cut(s) 176, 351
MwoI GCNNNNNNNGC 4 cut(s) 16, 91, 130, 155
NciI CCSGG 2 cut(s) 176, 351
NcoI CCATGG 2 cut(s) 89, 151
NdeI CATATG 1 cut(s) 226
NlaIII CATG 2 cut(s) 93, 155
NlaIV GGNNCC 5 cut(s) 6, 157, 344, 387, 388
PceI AGGCCT 1 cut(s) 39
PdmI GAANNNNTTC 1 cut(s) 402
PfeI GAWTC 1 cut(s) 164
PkrI GCNGC 3 cut(s) 9, 64, 87
PpuMI RGGWCCY 1 cut(s) 342
Psp5II RGGWCCY 1 cut(s) 342
PspN4I GGNNCC 5 cut(s) 6, 157, 344, 387, 388
PspOMI GGGCCC 1 cut(s) 386
PspPI GGNCC 4 cut(s) 342, 377, 386, 387
PspPPI RGGWCCY 1 cut(s) 342
RsaI GTAC 1 cut(s) 184
RsaNI GTAC 1 cut(s) 183
SaqAI TTAA 1 cut(s) 104
SatI GCNGC 3 cut(s) 8, 63, 86
Sau96I GGNCC 4 cut(s) 342, 377, 386, 387
ScrFI CCNGG 2 cut(s) 176, 351
SduI GDGCHC 1 cut(s) 390
SetI ASST 6 cut(s) 126, 192, 199, 245, 286, 395
SfaNI GCATC 2 cut(s) 120, 319
SinI GGWCC 1 cut(s) 342
SmlI CTYRAG 1 cut(s) 125
SmoI CTYRAG 1 cut(s) 125
Sse9I AATT 2 cut(s) 402, 414
SseBI AGGCCT 1 cut(s) 39
SsiI CCGC 7 cut(s) 8, 62, 86, 147, 222, 346, 383
SspI AATATT 1 cut(s) 76
SspMI CTAG 1 cut(s) 27
StuI AGGCCT 1 cut(s) 39
StyD4I CCNGG 2 cut(s) 174, 349
StyI CCWWGG 2 cut(s) 89, 151
TaiI ACGT 1 cut(s) 192
TaqI TCGA 1 cut(s) 42
TasI AATT 2 cut(s) 402, 414
TatI WGTACW 1 cut(s) 182
TauI GCSGC 3 cut(s) 10, 65, 88
TfiI GAWTC 1 cut(s) 164
Tru1I TTAA 1 cut(s) 104
Tru9I TTAA 1 cut(s) 104
TscAI CASTG 1 cut(s) 312
TspRI CASTG 1 cut(s) 312
VpaK11BI GGWCC 1 cut(s) 342
XapI RAATTY 2 cut(s) 402, 414
XmnI GAANNNNTTC 1 cut(s) 402
XspI CTAG 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.