Rmu_sc0002953.1_g000006

WSTF, HB1, Itc1p, MBD9 motif 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002953.1
OG0007850
Physical Location & Seq
Forward (+)
19913 .. 25173
5261 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2091 bp
ctgtcccgcagcaaccgcccctcccgcgcttgcaccctacgcgccgcggctaggttgcagcagcagcagcagtaccagcacgccgagccgaggaagccgaaggcggcgaggaaggagcagccgccgcagcaggagaacgacgagtcgtcgtcgccgcagcaatgcgggagcgccagcaagatcgtgacgtcgctggtggacccgccctcgcagtcgcaattgccgcggtggacgctccggtccatgtgggaattggcctccgtgctcaattttctacatgcttttcggccgctgttgaatatacacgccgagttctcggctgaggaattggagactgctttgatcacacccaatgatagcttgagtgacgttcacattcccttgttgaaggcgattccccctgtgacaagaatggcacttacacgtgatacttggataactgttttatgcagaaagttgagagactggtggcattgggttgcagatggagatctacctattgttgcttcacatggggcggagattgaagtatataaaacacttgatcccggtgtccgtgtggtcattttgaaagcactttgtgatattcgtgttgagcaagaggatatccggaactatattgacaattcactgaaacatggtgtccagctttccacatttcgtaaagaacgccttgggggtgattcacatggaatctcttactggtatgaagatgatccaattattggttatcggttatatcgggagataaggaagactgaggtgaagaaagtaagagcaaagggttcccatgtccttcctagtacaacataccagtgggaaacagttgcaaccaattttgatgaatttcaagatgttggagaaaaacttttctccagtatcaatagaacagaggctgctgtaggaaaaaagttgaaaggtgacatgcttgtagagattgagaaggttcacaagaggaaagagaagttgctgaagaagcaacacagacaagctctgctccttgataattatgtgtctgtggatgggcttggtccggggcgctctcttcgtgacagaaaacctgtcacatacacttttgatgattatgaccggtcaatcaatgaggccatcaagataaccaaaacgaaacagccatcccctgagcctttacagaaacgagatgttgttatgaaacatgaagcttctagcaatggtaaatggagtggtacttcaaattcccatgagcatgtgggatttagcccactgtctcctaaatcacctgattacgaagacgaagaagatgatgttgaggaagatgacaaatctgaacaaatggatagaagcaatcggcgaagacagaggccccaacggtattctgcaaaagaatttgttgaagcagtttcagataatgatgcagactttgacagtgatgatgaaatagttggtgaagctatttatgatgaagaatacttaaagaaacgtaaggagaggagaaagttttctagtagctctgaaggagatgaggagtatcgttgggaggaagaaaatcctgaagaggaggaagaggaggaggaagaagattctgctagtgccagtgaagaaagtgatgaacctcgaaagtttaagaaactgcgcggtcgtcctaaggaattgccaggacgtactaggagggaagctaaattgaggtcggttgatgagctccagtcaggtctaagacgcagtaagagggccaccagaaatcgtattgattatcggcagtatgagttttcagattcagatacagagcctatgaaacctgagaagtcaaatgcatcagatcgacactctgatgcaactgagaatggtgactattcaatggaaagtcaagattcagatgttaatgatggtcaccatgaaatggaagttggtcaggctgatcaggctgttgaaaattacccagaaacagtagaaaaagaggaaaaccagccacctgaaaaatcaaatagcccaggggaaaatgaagttggaggtgtacagaaaagacgtttccttgacctaaacgaacttgcccctggttcaggttttgacgatggtccaaatacgataatgaaagatgatgcggatgatttgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDT WHIM1

Protein Analysis

696

Amino Acids

79.92

Weight (kDa)

5.18

Isoelectric Point (pI)

59.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DDT PF02791 87 - 132 8e-06 DDT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 238
AatII GACGTC 1 cut(s) 191
AccB7I CCANNNNNTGG 2 cut(s) 725, 1876
AccII CGCG 5 cut(s) 27, 42, 47, 226, 1614
AccIII TCCGGA 1 cut(s) 609
AclWI GGATC 2 cut(s) 539, 710
AcoI YGGCCR 1 cut(s) 287
AcsI RAATTY 3 cut(s) 845, 1213, 1364
AcuI CTGAAG 3 cut(s) 992, 1512, 1551
AcvI CACGTG 1 cut(s) 425
AcyI GRCGYC 1 cut(s) 188
AdeI CACNNNGTG 1 cut(s) 581
AfaI GTAC 5 cut(s) 74, 805, 1207, 1642, 1992
AfiI CCNNNNNNNGG 5 cut(s) 51, 90, 725, 1876, 2036
AflIII ACRYGT 1 cut(s) 422
AgeI ACCGGT 1 cut(s) 1089
AhdI GACNNNNNGTC 1 cut(s) 145
AjnI CCWGG 3 cut(s) 1633, 1966, 2029
AjuI GAANNNNNNNTTGG 4 cut(s) 1866, 1898, 1965, 1997
AluBI AGCT 8 cut(s) 360, 649, 992, 1181, 1430, 1488, 1655, 1678
AluI AGCT 8 cut(s) 360, 649, 992, 1181, 1430, 1488, 1655, 1678
Alw21I GWGCWC 2 cut(s) 267, 1680
Alw26I GTCTC 3 cut(s) 326, 456, 1251
AlwI GGATC 2 cut(s) 539, 710
AlwNI CAGNNNCTG 1 cut(s) 896
Aor13HI TCCGGA 1 cut(s) 609
AoxI GGCC 5 cut(s) 255, 287, 1104, 1340, 1707
ApeKI GCWGC 9 cut(s) 9, 58, 61, 64, 67, 118, 127, 157, 896
ApoI RAATTY 3 cut(s) 845, 1213, 1364
AsiGI ACCGGT 1 cut(s) 1089
Asp700I GAANNNNTTC 1 cut(s) 1477
AspLEI GCGC 5 cut(s) 29, 44, 173, 1041, 1614
AspS9I GGNCC 6 cut(s) 199, 240, 1031, 1341, 1707, 2051
AsuC2I CCSGG 2 cut(s) 549, 1035
AsuHPI GGTGA 7 cut(s) 692, 775, 932, 1248, 1436, 1835, 1859
AvaII GGWCC 4 cut(s) 199, 240, 1031, 2051
AxyI CCTNAGG 1 cut(s) 1623
BanII GRGCYC 1 cut(s) 1680
BbrPI CACGTG 1 cut(s) 425
BbsI GAAGAC 3 cut(s) 761, 1275, 1339
Bbv12I GWGCWC 2 cut(s) 267, 1680
BbvCI CCTCAGC 1 cut(s) 321
BbvI GCAGC 9 cut(s) 21, 70, 73, 76, 79, 130, 139, 169, 883
BccI CCATC 6 cut(s) 479, 1016, 1115, 1141, 1856, 2042
BciT130I CCWGG 3 cut(s) 1635, 1968, 2031
BclI TGATCA 2 cut(s) 342, 1894
BcnI CCSGG 2 cut(s) 549, 1035
BcoDI GTCTC 3 cut(s) 326, 456, 1251
BfaI CTAG 6 cut(s) 51, 801, 1185, 1482, 1566, 1644
BfmI CTRYAG 1 cut(s) 900
BfoI RGCGCY 2 cut(s) 174, 1042
BglII AGATCT 1 cut(s) 490
Bme1390I CCNGG 5 cut(s) 549, 1035, 1635, 1968, 2031
Bme18I GGWCC 4 cut(s) 199, 240, 1031, 2051
BmeRI GACNNNNNGTC 1 cut(s) 145
BmgT120I GGNCC 6 cut(s) 199, 240, 1031, 1341, 1707, 2051
BmiI GGNNCC 3 cut(s) 201, 787, 1343
BmrFI CCNGG 5 cut(s) 549, 1035, 1635, 1968, 2031
BmsI GCATC 4 cut(s) 1381, 1798, 1799, 2065
BoxI GACNNNNGTC 1 cut(s) 2049
BpiI GAAGAC 3 cut(s) 761, 1275, 1339
BpmI CTGGAG 2 cut(s) 859, 1664
Bpu10I CCTNAGC 2 cut(s) 321, 1140
BpuEI CTTGAG 1 cut(s) 382
BpuMI CCSGG 2 cut(s) 549, 1035
BsaAI YACGTR 1 cut(s) 425
BsaBI GATNNNNATC 1 cut(s) 489
BsaHI GRCGYC 1 cut(s) 188
BsaJI CCNNGG 8 cut(s) 45, 89, 224, 673, 1034, 1966, 1967, 2029
BsaWI WCCGGW 3 cut(s) 237, 609, 1089
BsaXI ACNNNNNCTCC 2 cut(s) 5, 35
Bsc4I CCNNNNNNNGG 5 cut(s) 51, 90, 725, 1876, 2036
Bse118I RCCGGY 1 cut(s) 1089
Bse1I ACTGG 6 cut(s) 470, 707, 814, 876, 1572, 1681
Bse21I CCTNAGG 1 cut(s) 1623
Bse3DI GCAATG 2 cut(s) 167, 1195
Bse8I GATNNNNATC 1 cut(s) 489
BseAI TCCGGA 1 cut(s) 609
BseBI CCWGG 3 cut(s) 1635, 1968, 2031
BseDI CCNNGG 8 cut(s) 45, 89, 224, 673, 1034, 1966, 1967, 2029
BseGI GGATG 3 cut(s) 1027, 1133, 2086
BseJI GATNNNNATC 1 cut(s) 489
BseLI CCNNNNNNNGG 5 cut(s) 51, 90, 725, 1876, 2036
BseMI GCAATG 2 cut(s) 167, 1195
BseMII CTCAG 5 cut(s) 312, 750, 1131, 1767, 1806
BseNI ACTGG 6 cut(s) 470, 707, 814, 876, 1572, 1681
BseRI GAGGAG 5 cut(s) 1483, 1517, 1550, 1559, 1562
BseX3I CGGCCG 1 cut(s) 287
BseXI GCAGC 9 cut(s) 21, 70, 73, 76, 79, 130, 139, 169, 883
Bsh1236I CGCG 5 cut(s) 27, 42, 47, 226, 1614
Bsh1285I CGRYCG 2 cut(s) 290, 1618
BshFI GGCC 5 cut(s) 257, 289, 1106, 1342, 1709
BshTI ACCGGT 1 cut(s) 1089
BsiEI CGRYCG 2 cut(s) 290, 1618
BsiHKAI GWGCWC 2 cut(s) 267, 1680
BsiSI CCGG 5 cut(s) 238, 549, 610, 1034, 1090
BslI CCNNNNNNNGG 5 cut(s) 51, 90, 725, 1876, 2036
BsmAI GTCTC 3 cut(s) 326, 456, 1251
BsnI GGCC 5 cut(s) 257, 289, 1106, 1342, 1709
Bsp1286I GDGCHC 2 cut(s) 267, 1680
Bsp13I TCCGGA 1 cut(s) 609
Bsp1407I TGTACA 1 cut(s) 1990
Bsp143I GATC 7 cut(s) 180, 342, 490, 544, 715, 1795, 1894
BspANI GGCC 5 cut(s) 257, 289, 1106, 1342, 1709
BspCNI CTCAG 5 cut(s) 313, 751, 1132, 1768, 1807
BspEI TCCGGA 1 cut(s) 609
BspFNI CGCG 5 cut(s) 27, 42, 47, 226, 1614
BspLI GGNNCC 3 cut(s) 201, 787, 1343
BspPI GGATC 2 cut(s) 539, 710
BsrDI GCAATG 2 cut(s) 167, 1195
BsrFI RCCGGY 1 cut(s) 1089
BsrGI TGTACA 1 cut(s) 1990
BsrI ACTGG 6 cut(s) 470, 707, 814, 876, 1572, 1681
BssAI RCCGGY 1 cut(s) 1089
BssECI CCNNGG 8 cut(s) 45, 89, 224, 673, 1034, 1966, 1967, 2029
BssMI GATC 7 cut(s) 180, 342, 490, 544, 715, 1795, 1894
BssNI GRCGYC 1 cut(s) 188
BssT1I CCWWGG 1 cut(s) 673
Bst2UI CCWGG 3 cut(s) 1635, 1968, 2031
Bst4CI ACNGT 6 cut(s) 442, 826, 1245, 1350, 1406, 1924
Bst6I CTCTTC 3 cut(s) 1050, 1527, 1536
BstACI GRCGYC 1 cut(s) 188
BstAUI TGTACA 1 cut(s) 1990
BstBAI YACGTR 1 cut(s) 425
BstC8I GCNNGC 3 cut(s) 31, 81, 175
BstDEI CTNAG 7 cut(s) 321, 759, 1140, 1623, 1691, 1776, 1815
BstDSI CCRYGG 2 cut(s) 45, 224
BstEII GGTNACC 1 cut(s) 1865
BstENI CCTNNNNNAGG 1 cut(s) 2034
BstF5I GGATG 3 cut(s) 1027, 1133, 2086
BstFNI CGCG 5 cut(s) 27, 42, 47, 226, 1614
BstH2I RGCGCY 2 cut(s) 174, 1042
BstHHI GCGC 5 cut(s) 29, 44, 173, 1041, 1614
BstKTI GATC 7 cut(s) 183, 345, 493, 547, 718, 1798, 1897
BstMAI GTCTC 3 cut(s) 326, 456, 1251
BstMBI GATC 7 cut(s) 180, 342, 490, 544, 715, 1795, 1894
BstMCI CGRYCG 2 cut(s) 290, 1618
BstNI CCWGG 3 cut(s) 1635, 1968, 2031
BstNSI RCATGY 3 cut(s) 281, 928, 1229
BstPAI GACNNNNGTC 1 cut(s) 2049
BstPI GGTNACC 1 cut(s) 1865
BstSCI CCNGG 5 cut(s) 547, 1033, 1633, 1966, 2029
BstSFI CTRYAG 1 cut(s) 900
BstUI CGCG 5 cut(s) 27, 42, 47, 226, 1614
BstV1I GCAGC 9 cut(s) 21, 70, 73, 76, 79, 130, 139, 169, 883
BstV2I GAAGAC 3 cut(s) 761, 1275, 1339
BstX2I RGATCY 1 cut(s) 490
BstYI RGATCY 1 cut(s) 490
BstZI CGGCCG 1 cut(s) 287
Bsu36I CCTNAGG 1 cut(s) 1623
BsuRI GGCC 5 cut(s) 257, 289, 1106, 1342, 1709
BtgI CCRYGG 2 cut(s) 45, 224
BtsCI GGATG 3 cut(s) 1027, 1133, 2086
BtsIMutI CAGTG 5 cut(s) 629, 821, 1241, 1411, 1579
Cac8I GCNNGC 3 cut(s) 31, 81, 175
CaiI CAGNNNCTG 1 cut(s) 896
CfoI GCGC 5 cut(s) 29, 44, 173, 1041, 1614
Cfr10I RCCGGY 1 cut(s) 1089
Cfr13I GGNCC 6 cut(s) 199, 240, 1031, 1341, 1707, 2051
Cfr42I CCGCGG 2 cut(s) 48, 227
CseI GACGC 2 cut(s) 241, 1704
Csp6I GTAC 5 cut(s) 73, 804, 1206, 1641, 1991
CspAI ACCGGT 1 cut(s) 1089
CviQI GTAC 5 cut(s) 73, 804, 1206, 1641, 1991
DdeI CTNAG 7 cut(s) 321, 759, 1140, 1623, 1691, 1776, 1815
DpnI GATC 7 cut(s) 182, 344, 492, 546, 717, 1797, 1896
DpnII GATC 7 cut(s) 180, 342, 490, 544, 715, 1795, 1894
DraIII CACNNNGTG 1 cut(s) 581
DrdI GACNNNNNNGTC 1 cut(s) 238
DriI GACNNNNNGTC 1 cut(s) 145
DseDI GACNNNNNNGTC 1 cut(s) 238
EaeI YGGCCR 1 cut(s) 287
EagI CGGCCG 1 cut(s) 287
Eam1104I CTCTTC 3 cut(s) 1050, 1527, 1536
Eam1105I GACNNNNNGTC 1 cut(s) 145
EarI CTCTTC 3 cut(s) 1050, 1527, 1536
EciI GGCGGA 1 cut(s) 533
Ecl136II GAGCTC 1 cut(s) 1678
EclXI CGGCCG 1 cut(s) 287
Eco130I CCWWGG 1 cut(s) 673
Eco24I GRGCYC 1 cut(s) 1680
Eco32I GATATC 1 cut(s) 607
Eco47I GGWCC 4 cut(s) 199, 240, 1031, 2051
Eco52I CGGCCG 1 cut(s) 287
Eco53kI GAGCTC 1 cut(s) 1678
Eco57I CTGAAG 3 cut(s) 992, 1512, 1551
Eco72I CACGTG 1 cut(s) 425
Eco81I CCTNAGG 1 cut(s) 1623
Eco91I GGTNACC 1 cut(s) 1865
EcoICRI GAGCTC 1 cut(s) 1678
EcoNI CCTNNNNNAGG 1 cut(s) 2034
EcoO109I RGGNCCY 1 cut(s) 1341
EcoO65I GGTNACC 1 cut(s) 1865
EcoRII CCWGG 3 cut(s) 1633, 1966, 2029
EcoRV GATATC 1 cut(s) 607
EcoT14I CCWWGG 1 cut(s) 673
EcoT22I ATGCAT 1 cut(s) 1792
EcoT38I GRGCYC 1 cut(s) 1680
ErhI CCWWGG 1 cut(s) 673
FalI AAGNNNNNCTT 2 cut(s) 657, 689
FauI CCCGC 4 cut(s) 14, 32, 158, 210
FbaI TGATCA 2 cut(s) 342, 1894
FokI GGATG 2 cut(s) 1034, 1120
FriOI GRGCYC 1 cut(s) 1680
FspBI CTAG 6 cut(s) 51, 801, 1185, 1482, 1566, 1644
GlaI GCGC 5 cut(s) 28, 43, 172, 1040, 1613
GsuI CTGGAG 2 cut(s) 859, 1664
HaeII RGCGCY 2 cut(s) 174, 1042
HaeIII GGCC 5 cut(s) 257, 289, 1106, 1342, 1709
HapII CCGG 5 cut(s) 238, 549, 610, 1034, 1090
HgaI GACGC 2 cut(s) 241, 1704
HhaI GCGC 5 cut(s) 29, 44, 173, 1041, 1614
Hin1I GRCGYC 1 cut(s) 188
Hin6I GCGC 5 cut(s) 27, 42, 171, 1039, 1612
HinP1I GCGC 5 cut(s) 27, 42, 171, 1039, 1612
HindIII AAGCTT 1 cut(s) 1179
HinfI GANTC 7 cut(s) 143, 394, 683, 693, 1559, 1751, 1847
HpaII CCGG 5 cut(s) 238, 549, 610, 1034, 1090
HphI GGTGA 7 cut(s) 692, 775, 932, 1248, 1436, 1835, 1859
Hpy166II GTNNAC 5 cut(s) 199, 231, 373, 949, 1991
Hpy188I TCNGA 8 cut(s) 1306, 1384, 1492, 1750, 1756, 1795, 1807, 1852
Hpy188III TCNNGA 8 cut(s) 184, 610, 743, 851, 1049, 1111, 1529, 1844
Hpy8I GTNNAC 5 cut(s) 199, 231, 373, 949, 1991
Hpy99I CGWCG 4 cut(s) 143, 151, 154, 193
HpyAV CCTTC 6 cut(s) 94, 106, 382, 806, 937, 1487
HpyCH4III ACNGT 6 cut(s) 442, 826, 1245, 1350, 1406, 1924
HpyCH4IV ACGT 6 cut(s) 188, 369, 424, 1459, 1639, 2002
HpyCH4V TGCA 9 cut(s) 33, 58, 450, 482, 830, 1358, 1394, 1790, 1811
HpyF3I CTNAG 7 cut(s) 321, 759, 1140, 1623, 1691, 1776, 1815
HpySE526I ACGT 6 cut(s) 188, 369, 424, 1459, 1639, 2002
Hsp92I GRCGYC 1 cut(s) 188
HspAI GCGC 5 cut(s) 27, 42, 171, 1039, 1612
Kpn2I TCCGGA 1 cut(s) 609
Ksp22I TGATCA 2 cut(s) 342, 1894
KspI CCGCGG 2 cut(s) 48, 227
Kzo9I GATC 7 cut(s) 180, 342, 490, 544, 715, 1795, 1894
LmnI GCTCC 5 cut(s) 115, 168, 240, 1002, 1683
Lsp1109I GCAGC 9 cut(s) 21, 70, 73, 76, 79, 130, 139, 169, 883
LweI GCATC 4 cut(s) 1381, 1798, 1799, 2065
MaeI CTAG 6 cut(s) 51, 801, 1185, 1482, 1566, 1644
MaeII ACGT 6 cut(s) 188, 369, 424, 1459, 1639, 2002
MaeIII GTNAC 8 cut(s) 184, 365, 403, 920, 1049, 1063, 1823, 1865
MalI GATC 7 cut(s) 182, 344, 492, 546, 717, 1797, 1896
MboI GATC 7 cut(s) 180, 342, 490, 544, 715, 1795, 1894
MfeI CAATTG 1 cut(s) 218
MflI RGATCY 1 cut(s) 490
MhlI GDGCHC 2 cut(s) 267, 1680
MlyI GAGTC 1 cut(s) 152
MmeI TCCRAC 2 cut(s) 838, 1963
Mph1103I ATGCAT 1 cut(s) 1792
MroI TCCGGA 1 cut(s) 609
MroXI GAANNNNTTC 1 cut(s) 1477
MseI TTAA 3 cut(s) 1451, 1602, 1857
MslI CAYNNNNRTG 3 cut(s) 814, 1224, 1806
MspA1I CMGCKG 3 cut(s) 47, 226, 292
MspI CCGG 5 cut(s) 238, 549, 610, 1034, 1090
MspR9I CCNGG 5 cut(s) 549, 1035, 1635, 1968, 2031
MunI CAATTG 1 cut(s) 218
MvaI CCWGG 3 cut(s) 1635, 1968, 2031
MvnI CGCG 5 cut(s) 27, 42, 47, 226, 1614
NciI CCSGG 2 cut(s) 549, 1035
NdeII GATC 7 cut(s) 180, 342, 490, 544, 715, 1795, 1894
NlaIV GGNNCC 3 cut(s) 201, 787, 1343
NmeAIII GCCGAG 4 cut(s) 109, 114, 296, 334
NmuCI GTSAC 8 cut(s) 184, 365, 403, 920, 1049, 1063, 1823, 1865
NsiI ATGCAT 1 cut(s) 1792
NspI RCATGY 3 cut(s) 281, 928, 1229
PasI CCCWGGG 1 cut(s) 1967
PdmI GAANNNNTTC 1 cut(s) 1477
PfeI GAWTC 6 cut(s) 394, 683, 693, 1559, 1751, 1847
PflMI CCANNNNNTGG 2 cut(s) 725, 1876
PinAI ACCGGT 1 cut(s) 1089
PleI GAGTC 1 cut(s) 151
PmaCI CACGTG 1 cut(s) 425
PmlI CACGTG 1 cut(s) 425
PpsI GAGTC 1 cut(s) 151
Ppu21I YACGTR 1 cut(s) 425
PshAI GACNNNNGTC 1 cut(s) 2049
Psp124BI GAGCTC 1 cut(s) 1680
Psp6I CCWGG 3 cut(s) 1633, 1966, 2029
PspCI CACGTG 1 cut(s) 425
PspEI GGTNACC 1 cut(s) 1865
PspGI CCWGG 3 cut(s) 1633, 1966, 2029
PspN4I GGNNCC 3 cut(s) 201, 787, 1343
PspPI GGNCC 6 cut(s) 199, 240, 1031, 1341, 1707, 2051
PstNI CAGNNNCTG 1 cut(s) 896
PsuI RGATCY 1 cut(s) 490
RsaI GTAC 5 cut(s) 74, 805, 1207, 1642, 1992
RsaNI GTAC 5 cut(s) 73, 804, 1206, 1641, 1991
RseI CAYNNNNRTG 3 cut(s) 814, 1224, 1806
SacI GAGCTC 1 cut(s) 1680
SacII CCGCGG 2 cut(s) 48, 227
SaqAI TTAA 3 cut(s) 1451, 1602, 1857
Sau3AI GATC 7 cut(s) 180, 342, 490, 544, 715, 1795, 1894
Sau96I GGNCC 6 cut(s) 199, 240, 1031, 1341, 1707, 2051
SchI GAGTC 1 cut(s) 152
ScrFI CCNGG 5 cut(s) 549, 1035, 1635, 1968, 2031
SduI GDGCHC 2 cut(s) 267, 1680
SfaNI GCATC 4 cut(s) 1381, 1798, 1799, 2065
SfcI CTRYAG 1 cut(s) 900
Sfr303I CCGCGG 2 cut(s) 48, 227
SgrBI CCGCGG 2 cut(s) 48, 227
SinI GGWCC 4 cut(s) 199, 240, 1031, 2051
SmiMI CAYNNNNRTG 3 cut(s) 814, 1224, 1806
SmlI CTYRAG 1 cut(s) 361
SmoI CTYRAG 1 cut(s) 361
SspMI CTAG 6 cut(s) 51, 801, 1185, 1482, 1566, 1644
SstI GAGCTC 1 cut(s) 1680
StyD4I CCNGG 5 cut(s) 547, 1033, 1633, 1966, 2029
StyI CCWWGG 1 cut(s) 673
TaaI ACNGT 6 cut(s) 442, 826, 1245, 1350, 1406, 1924
TaiI ACGT 6 cut(s) 191, 372, 427, 1462, 1642, 2005
TaqI TCGA 2 cut(s) 1594, 1798
TatI WGTACW 2 cut(s) 803, 1990
TauI GCSGC 8 cut(s) 47, 50, 107, 124, 127, 157, 226, 292
TfiI GAWTC 6 cut(s) 394, 683, 693, 1559, 1751, 1847
Tru1I TTAA 3 cut(s) 1451, 1602, 1857
Tru9I TTAA 3 cut(s) 1451, 1602, 1857
TscAI CASTG 5 cut(s) 636, 821, 1248, 1411, 1579
TseFI GTSAC 8 cut(s) 184, 365, 403, 920, 1049, 1063, 1823, 1865
TseI GCWGC 9 cut(s) 9, 58, 61, 64, 67, 118, 127, 157, 896
Tsp45I GTSAC 8 cut(s) 184, 365, 403, 920, 1049, 1063, 1823, 1865
TspGWI ACGGA 2 cut(s) 250, 545
TspRI CASTG 5 cut(s) 636, 821, 1248, 1411, 1579
Van91I CCANNNNNTGG 2 cut(s) 725, 1876
VpaK11BI GGWCC 4 cut(s) 199, 240, 1031, 2051
XagI CCTNNNNNAGG 1 cut(s) 2034
XapI RAATTY 3 cut(s) 845, 1213, 1364
XceI RCATGY 3 cut(s) 281, 928, 1229
XcmI CCANNNNNNNNNTGG 1 cut(s) 250
XmnI GAANNNNTTC 1 cut(s) 1477
XspI CTAG 6 cut(s) 51, 801, 1185, 1482, 1566, 1644
ZraI GACGTC 1 cut(s) 189
Zsp2I ATGCAT 1 cut(s) 1792
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.