Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003846.1

Orthogroup ID

OG0004542

Physical Location & Seq

Genomic Coordinates Reverse (-)

17558 .. 27710

Gene Structure 10153 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003846.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

atgcttgcaaggaatgacgtccctacgagaggacgtagtgccaccctacacgaaggtagggatggcgccaatgccaaagagagtggcactctggcgttacaggccatggccccagctaggatgcgtgggaggcccgtgggttcgaaggatactttggcacattccaatcctttgatcatcaagtctcaaaatccgtctcatgagaaacaagaagaacaagaagcgcagccggcagcacaaagccaacacgacgccgttccccgccgctcctatcaccacagctcttcgtctctgtttcttttccgtttcgtatactattgccgccgccgctctcatttgaccgcttcacctttcactcaactttttccgatggcgcttcgtttcgaggttttggggaggttcaatcgtgctcgtgcagctcaactcacactccctcactttgtatgtcagactcctcttttcatgcctgttggaacacaaggaactataaaagggttggcaactgaccagcttgaggagattggttgccaaataattcttgggaatacatatcatttggcacttcgacctacctctgagcttattgacgagatgggaggtctccacaaatttatgaactggccaagagcgctgcttactgattctggtggctttcagatggtatccttattgcatttagctgacatcactgaggagggtgtaacatttcagtcaccggtcgatggaaagccaatgctcttgacacctgaggaatcaattcaagtccaaaatagaattggagcagatattataatggcccttgatgatgtagtgagaaccaccatcactggtccaagaattgaggaggccatgtatcgtactctacgatggattgacagatgtatagcagctcatacaagaccgagcgagcagaacttatttggtattgttcaaggtggcttagatcctgtactaagggatatatgcgtcagaggcttagtagaacggaatttgcctggctatgccataggcggtcttgcgggtggcgaaagtaaggattcattttggcgtgttgttgctcagtgcactgctgcactgcctgaggacaagccgcgatatgttatgggcgttggttatccattggacattgtagtttgcagtgcgttaggtgctgacatgtatgactgtgtttatccaacacgtactgctcgctttggcacagctcttatacctgagggagtgctgaagctgaagcacaaagctatggctgaggatacccgccctatcgatcctacatgtgcttgtatggtatgcaagaattatactagagcttacattcattgcttagttacaaaagatgctatgggatctcagcttctgtcatatcacaacctgtattacatgctaaagctaagtagagatctacactcatcaataatccaaggaacatttccagagtttatatgcaactttctgcaaacaatgtttcctaaaggagatgtcccggaatgggtctgcaatgccatggaggttgctggaattgacatctcttcatgttgtactccattttcttcatcccaagattcagattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0008479 GO:0009451 GO:0009987 GO:0010467 GO:0016020 GO:0016070 GO:0016740 GO:0016757 GO:0016763 GO:0019867 GO:0031090 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046982 GO:0046983 GO:0071704 GO:0090304 GO:0098588 GO:0098805 GO:0101030 GO:0140098 GO:0140101 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TGT

Protein Analysis

523

Amino Acids

57.96

Weight (kDa)

6.76

Isoelectric Point (pI)

50.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004542)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g36560 FvH4_5g36560 FvH4_5g36560 FvH4_5g36560 FvH4_5g36560 FvH4_5g36560
malus_domestica	MD08G1188600.v1.1 MD15G1376400.v1.1
prunus_persica	Prupe.1G523100_v2.0.a1 Prupe.1G523100_v2.0.a1
pyrus_communis	pycom08g16230 pycom15g33630
rosa_chinensis	RchiOBHm_Chr3g0492071 RchiOBHm_Chr7g0242241
rosa_laevigata	RLG00000000904 RLG00000022795
rosa_multiflora	Rmu_sc0003846.1_g000008 Rmu_sc0031707.1_g000001
rosa_roxburghii	Rroxscaffold_6G00392560
rosa_rugosa	Rorug03G0251600 Rorug03G0251700 Rorug07G0314300
rosa_samantha	Rh3AG301800 Rh3BG337600 Rh3BG337700 Rh3CG335200 Rh3DG337300 Rh7AG469700 Rh7BG439500 Rh7CG486300 Rh7DG454700
rosa_wichuraiana	Rw3G026640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	791
AatII	GACGTC	1 cut(s)	21
AccB1I	GGYRCC	1 cut(s)	65
AccBSI	CCGCTC	2 cut(s)	267, 330
AccI	GTMKAC	1 cut(s)	312
AccII	CGCG	1 cut(s)	1093
AclWI	GGATC	3 cut(s)	938, 1262, 1354
AcoI	YGGCCR	1 cut(s)	620
AcsI	RAATTY	2 cut(s)	608, 988
AcuI	CTGAAG	2 cut(s)	1244, 1250
AcyI	GRCGYC	3 cut(s)	18, 66, 252
AfaI	GTAC	4 cut(s)	859, 951, 1183, 1540
AfeI	AGCGCT	1 cut(s)	630
AfiI	CCNNNNNNNGG	5 cut(s)	29, 117, 514, 722, 1489
AflIII	ACRYGT	3 cut(s)	1155, 1178, 1274
AgeI	ACCGGT	1 cut(s)	715
AgsI	TTSAA	3 cut(s)	403, 761, 932
AjnI	CCWGG	1 cut(s)	994
AjuI	GAANNNNNNNTTGG	4 cut(s)	137, 169, 1413, 1445
Alw21I	GWGCWC	2 cut(s)	412, 1067
Alw26I	GTCTC	4 cut(s)	189, 201, 294, 605
Alw44I	GTGCAC	1 cut(s)	1063
AlwI	GGATC	3 cut(s)	938, 1262, 1354
AlwNI	CAGNNNCTG	1 cut(s)	1357
Aor51HI	AGCGCT	1 cut(s)	630
AoxI	GGCC	6 cut(s)	102, 108, 131, 620, 795, 846
ApaLI	GTGCAC	1 cut(s)	1063
ApeKI	GCWGC	6 cut(s)	226, 233, 416, 631, 887, 1070
ApoI	RAATTY	2 cut(s)	608, 988
AsiGI	ACCGGT	1 cut(s)	715
Asp700I	GAANNNNTTC	1 cut(s)	756
AspLEI	GCGC	4 cut(s)	68, 226, 376, 631
AspS9I	GGNCC	4 cut(s)	109, 132, 796, 830
AsuC2I	CCSGG	1 cut(s)	1484
AsuHPI	GGTGA	3 cut(s)	266, 339, 705
AsuII	TTCGAA	1 cut(s)	143
AvaII	GGWCC	1 cut(s)	830
AxyI	CCTNAGG	3 cut(s)	747, 1080, 1212
BaeGI	GKGCMC	1 cut(s)	1067
BalI	TGGCCA	1 cut(s)	622
BanI	GGYRCC	1 cut(s)	65
BauI	CACGAG	1 cut(s)	411
Bbv12I	GWGCWC	2 cut(s)	412, 1067
BbvCI	CCTCAGC	1 cut(s)	1248
BbvI	GCAGC	6 cut(s)	238, 245, 428, 618, 899, 1057
BccI	CCATC	7 cut(s)	56, 364, 586, 652, 716, 830, 861
BceAI	ACGGC	1 cut(s)	239
BciT130I	CCWGG	1 cut(s)	996
BciVI	GTATCC	3 cut(s)	142, 673, 1246
BclI	TGATCA	1 cut(s)	174
BcnI	CCSGG	1 cut(s)	1484
BcoDI	GTCTC	4 cut(s)	189, 201, 294, 605
BfaI	CTAG	2 cut(s)	117, 1305
BfoI	RGCGCY	3 cut(s)	69, 377, 632
BfuI	GTATCC	3 cut(s)	142, 673, 1246
BglII	AGATCT	1 cut(s)	1399
Bme1390I	CCNGG	2 cut(s)	996, 1484
Bme18I	GGWCC	1 cut(s)	830
BmgT120I	GGNCC	4 cut(s)	109, 132, 796, 830
BmiI	GGNNCC	2 cut(s)	67, 111
BmrFI	CCNGG	2 cut(s)	996, 1484
BmsI	GCATC	2 cut(s)	111, 1327
BplI	GAGNNNNNCTC	2 cut(s)	73, 105
Bpu10I	CCTNAGC	1 cut(s)	1248
Bpu14I	TTCGAA	1 cut(s)	143
BpuEI	CTTGAG	1 cut(s)	533
BpuMI	CCSGG	1 cut(s)	1484
Bsa29I	ATCGAT	1 cut(s)	1266
BsaAI	YACGTR	1 cut(s)	1181
BsaHI	GRCGYC	3 cut(s)	18, 66, 252
BsaI	GGTCTC	1 cut(s)	605
BsaJI	CCNNGG	4 cut(s)	105, 135, 1420, 1503
BsaWI	WCCGGW	1 cut(s)	715
BsaXI	ACNNNNNCTCC	4 cut(s)	414, 444, 836, 866
Bsc4I	CCNNNNNNNGG	5 cut(s)	29, 117, 514, 722, 1489
Bse118I	RCCGGY	2 cut(s)	229, 715
Bse1I	ACTGG	2 cut(s)	623, 832
Bse21I	CCTNAGG	3 cut(s)	747, 1080, 1212
Bse3DI	GCAATG	2 cut(s)	1318, 1504
BseBI	CCWGG	1 cut(s)	996
BseCI	ATCGAT	1 cut(s)	1266
BseDI	CCNNGG	4 cut(s)	105, 135, 1420, 1503
BseGI	GGATG	3 cut(s)	67, 126, 1553
BseLI	CCNNNNNNNGG	5 cut(s)	29, 117, 514, 722, 1489
BseMI	GCAATG	2 cut(s)	1318, 1504
BseMII	CTCAG	8 cut(s)	567, 681, 738, 1071, 1073, 1203, 1239, 1364
BseNI	ACTGG	2 cut(s)	623, 832
BseRI	GAGGAG	4 cut(s)	444, 530, 707, 857
BseSI	GKGCMC	1 cut(s)	1067
BseXI	GCAGC	6 cut(s)	238, 245, 428, 618, 899, 1057
BseYI	CCCAGC	1 cut(s)	112
BsgI	GTGCAG	2 cut(s)	435, 1056
Bsh1236I	CGCG	1 cut(s)	1093
Bsh1285I	CGRYCG	1 cut(s)	720
BshFI	GGCC	6 cut(s)	104, 110, 133, 622, 797, 848
BshNI	GGYRCC	1 cut(s)	65
BshTI	ACCGGT	1 cut(s)	715
BshVI	ATCGAT	1 cut(s)	1266
BsiEI	CGRYCG	1 cut(s)	720
BsiHKAI	GWGCWC	2 cut(s)	412, 1067
BsiSI	CCGG	3 cut(s)	230, 716, 1484
BslFI	GGGAC	2 cut(s)	5, 1466
BslI	CCNNNNNNNGG	5 cut(s)	29, 117, 514, 722, 1489
BsmAI	GTCTC	4 cut(s)	189, 201, 294, 605
BsmBI	CGTCTC	2 cut(s)	201, 294
BsmFI	GGGAC	2 cut(s)	5, 1466
BsnI	GGCC	6 cut(s)	104, 110, 133, 622, 797, 848
Bso31I	GGTCTC	1 cut(s)	605
Bsp119I	TTCGAA	1 cut(s)	143
Bsp1286I	GDGCHC	2 cut(s)	412, 1067
Bsp143I	GATC	5 cut(s)	174, 943, 1267, 1346, 1399
Bsp19I	CCATGG	2 cut(s)	105, 1503
BspANI	GGCC	6 cut(s)	104, 110, 133, 622, 797, 848
BspCNI	CTCAG	8 cut(s)	568, 682, 739, 1072, 1072, 1204, 1240, 1363
BspDI	ATCGAT	1 cut(s)	1266
BspFNI	CGCG	1 cut(s)	1093
BspHI	TCATGA	1 cut(s)	199
BspLI	GGNNCC	2 cut(s)	67, 111
BspPI	GGATC	3 cut(s)	938, 1262, 1354
BspQI	GCTCTTC	1 cut(s)	289
BspT104I	TTCGAA	1 cut(s)	143
BspT107I	GGYRCC	1 cut(s)	65
BspTNI	GGTCTC	1 cut(s)	605
BsrBI	CCGCTC	2 cut(s)	267, 330
BsrDI	GCAATG	2 cut(s)	1318, 1504
BsrFI	RCCGGY	2 cut(s)	229, 715
BsrI	ACTGG	2 cut(s)	623, 832
BssAI	RCCGGY	2 cut(s)	229, 715
BssECI	CCNNGG	4 cut(s)	105, 135, 1420, 1503
BssMI	GATC	5 cut(s)	174, 943, 1267, 1346, 1399
BssNAI	GTATAC	1 cut(s)	313
BssNI	GRCGYC	3 cut(s)	18, 66, 252
BssSI	CACGAG	1 cut(s)	411
BssT1I	CCWWGG	3 cut(s)	105, 1420, 1503
Bst1107I	GTATAC	1 cut(s)	313
Bst2BI	CACGAG	1 cut(s)	411
Bst2UI	CCWGG	1 cut(s)	996
Bst4CI	ACNGT	1 cut(s)	1166
Bst6I	CTCTTC	2 cut(s)	289, 1534
BstACI	GRCGYC	3 cut(s)	18, 66, 252
BstBAI	YACGTR	1 cut(s)	1181
BstBI	TTCGAA	1 cut(s)	143
BstC8I	GCNNGC	4 cut(s)	6, 231, 908, 1189
BstDSI	CCRYGG	3 cut(s)	105, 135, 1503
BstENI	CCTNNNNNAGG	1 cut(s)	27
BstF5I	GGATG	3 cut(s)	67, 126, 1553
BstFNI	CGCG	1 cut(s)	1093
BstH2I	RGCGCY	3 cut(s)	69, 377, 632
BstHHI	GCGC	4 cut(s)	68, 226, 376, 631
BstKTI	GATC	5 cut(s)	177, 946, 1270, 1349, 1402
BstMAI	GTCTC	4 cut(s)	189, 201, 294, 605
BstMBI	GATC	5 cut(s)	174, 943, 1267, 1346, 1399
BstMCI	CGRYCG	1 cut(s)	720
BstMWI	GCNNNNNNNGC	8 cut(s)	101, 130, 230, 327, 416, 628, 972, 1148
BstNI	CCWGG	1 cut(s)	996
BstNSI	RCATGY	3 cut(s)	1159, 1278, 1384
BstSCI	CCNGG	2 cut(s)	994, 1482
BstSLI	GKGCMC	1 cut(s)	1067
BstUI	CGCG	1 cut(s)	1093
BstV1I	GCAGC	6 cut(s)	238, 245, 428, 618, 899, 1057
BstX2I	RGATCY	3 cut(s)	943, 1346, 1399
BstYI	RGATCY	3 cut(s)	943, 1346, 1399
BstZ17I	GTATAC	1 cut(s)	313
Bsu15I	ATCGAT	1 cut(s)	1266
Bsu36I	CCTNAGG	3 cut(s)	747, 1080, 1212
BsuI	GTATCC	3 cut(s)	142, 673, 1246
BsuRI	GGCC	6 cut(s)	104, 110, 133, 622, 797, 848
BsuTUI	ATCGAT	1 cut(s)	1266
BtgI	CCRYGG	3 cut(s)	105, 135, 1503
BtsCI	GGATG	3 cut(s)	67, 126, 1553
BtsI	GCAGTG	3 cut(s)	1065, 1073, 1144
BtsIMutI	CAGTG	6 cut(s)	687, 825, 1065, 1067, 1073, 1144
Cac8I	GCNNGC	4 cut(s)	6, 231, 908, 1189
CaiI	CAGNNNCTG	1 cut(s)	1357
CciI	TCATGA	1 cut(s)	199
CfoI	GCGC	4 cut(s)	68, 226, 376, 631
Cfr10I	RCCGGY	2 cut(s)	229, 715
Cfr13I	GGNCC	4 cut(s)	109, 132, 796, 830
ClaI	ATCGAT	1 cut(s)	1266
CseI	GACGC	2 cut(s)	260, 955
Csp6I	GTAC	4 cut(s)	858, 950, 1182, 1539
CspAI	ACCGGT	1 cut(s)	715
CspCI	CAANNNNNGTGG	2 cut(s)	64, 99
CviAII	CATG	9 cut(s)	106, 200, 463, 850, 1156, 1275, 1381, 1504, 1533
CviQI	GTAC	4 cut(s)	858, 950, 1182, 1539
DinI	GGCGCC	1 cut(s)	67
DpnI	GATC	5 cut(s)	176, 945, 1269, 1348, 1401
DpnII	GATC	5 cut(s)	174, 943, 1267, 1346, 1399
EaeI	YGGCCR	1 cut(s)	620
Eam1104I	CTCTTC	2 cut(s)	289, 1534
EarI	CTCTTC	2 cut(s)	289, 1534
Eco130I	CCWWGG	3 cut(s)	105, 1420, 1503
Eco31I	GGTCTC	1 cut(s)	605
Eco47I	GGWCC	1 cut(s)	830
Eco47III	AGCGCT	1 cut(s)	630
Eco57I	CTGAAG	2 cut(s)	1244, 1250
Eco81I	CCTNAGG	3 cut(s)	747, 1080, 1212
EcoNI	CCTNNNNNAGG	1 cut(s)	27
EcoRII	CCWGG	1 cut(s)	994
EcoT14I	CCWWGG	3 cut(s)	105, 1420, 1503
EgeI	GGCGCC	1 cut(s)	67
EheI	GGCGCC	1 cut(s)	67
ErhI	CCWWGG	3 cut(s)	105, 1420, 1503
Esp3I	CGTCTC	2 cut(s)	201, 294
FaeI	CATG	9 cut(s)	109, 203, 466, 853, 1159, 1278, 1384, 1507, 1536
FaqI	GGGAC	2 cut(s)	5, 1466
FatI	CATG	9 cut(s)	105, 199, 462, 849, 1155, 1274, 1380, 1503, 1532
FauI	CCCGC	3 cut(s)	269, 1012, 1265
FbaI	TGATCA	1 cut(s)	174
FblI	GTMKAC	1 cut(s)	312
FokI	GGATG	3 cut(s)	74, 133, 1540
FspBI	CTAG	2 cut(s)	117, 1305
GlaI	GCGC	4 cut(s)	67, 225, 375, 630
GsaI	CCCAGC	1 cut(s)	116
HaeII	RGCGCY	3 cut(s)	69, 377, 632
HaeIII	GGCC	6 cut(s)	104, 110, 133, 622, 797, 848
HapII	CCGG	3 cut(s)	230, 716, 1484
HgaI	GACGC	2 cut(s)	260, 955
HhaI	GCGC	4 cut(s)	68, 226, 376, 631
Hin1I	GRCGYC	3 cut(s)	18, 66, 252
Hin1II	CATG	9 cut(s)	109, 203, 466, 853, 1159, 1278, 1384, 1507, 1536
Hin6I	GCGC	4 cut(s)	66, 224, 374, 629
HinP1I	GCGC	4 cut(s)	66, 224, 374, 629
HinfI	GANTC	5 cut(s)	451, 641, 752, 1037, 1562
HpaII	CCGG	3 cut(s)	230, 716, 1484
HphI	GGTGA	3 cut(s)	266, 339, 705
Hpy166II	GTNNAC	2 cut(s)	313, 1065
Hpy188I	TCNGA	6 cut(s)	369, 450, 577, 657, 971, 1567
Hpy188III	TCNNGA	3 cut(s)	200, 739, 1433
Hpy8I	GTNNAC	2 cut(s)	313, 1065
Hpy99I	CGWCG	1 cut(s)	254
HpyAV	CCTTC	2 cut(s)	47, 139
HpyCH4III	ACNGT	1 cut(s)	1166
HpyCH4IV	ACGT	3 cut(s)	18, 34, 1180
HpyF10VI	GCNNNNNNNGC	8 cut(s)	101, 130, 230, 327, 416, 628, 972, 1148
HpySE526I	ACGT	3 cut(s)	18, 34, 1180
Hsp92I	GRCGYC	3 cut(s)	18, 66, 252
Hsp92II	CATG	9 cut(s)	109, 203, 466, 853, 1159, 1278, 1384, 1507, 1536
HspAI	GCGC	4 cut(s)	66, 224, 374, 629
KasI	GGCGCC	1 cut(s)	65
KroI	GCCGGC	1 cut(s)	229
KroNI	GCCGGC	1 cut(s)	231
Ksp22I	TGATCA	1 cut(s)	174
Kzo9I	GATC	5 cut(s)	174, 943, 1267, 1346, 1399
LguI	GCTCTTC	1 cut(s)	289
LmnI	GCTCC	2 cut(s)	272, 779
Lsp1109I	GCAGC	6 cut(s)	238, 245, 428, 618, 899, 1057
LweI	GCATC	2 cut(s)	111, 1327
MaeI	CTAG	2 cut(s)	117, 1305
MaeII	ACGT	3 cut(s)	18, 34, 1180
MaeIII	GTNAC	4 cut(s)	96, 700, 711, 1327
MalI	GATC	5 cut(s)	176, 945, 1269, 1348, 1401
MbiI	CCGCTC	2 cut(s)	267, 330
MboI	GATC	5 cut(s)	174, 943, 1267, 1346, 1399
MboII	GAAGA	4 cut(s)	224, 276, 1521, 1542
MflI	RGATCY	3 cut(s)	943, 1346, 1399
MhlI	GDGCHC	2 cut(s)	412, 1067
MlsI	TGGCCA	1 cut(s)	622
MluCI	AATT	8 cut(s)	534, 608, 756, 774, 837, 988, 1297, 1518
MluNI	TGGCCA	1 cut(s)	622
Mly113I	GGCGCC	1 cut(s)	66
MlyI	GAGTC	1 cut(s)	445
MmeI	TCCRAC	2 cut(s)	451, 1199
Mox20I	TGGCCA	1 cut(s)	622
MroNI	GCCGGC	1 cut(s)	229
MroXI	GAANNNNTTC	1 cut(s)	756
MscI	TGGCCA	1 cut(s)	622
Msp20I	TGGCCA	1 cut(s)	622
MspI	CCGG	3 cut(s)	230, 716, 1484
MspR9I	CCNGG	2 cut(s)	996, 1484
MvaI	CCWGG	1 cut(s)	996
MvnI	CGCG	1 cut(s)	1093
MwoI	GCNNNNNNNGC	8 cut(s)	101, 130, 230, 327, 416, 628, 972, 1148
NaeI	GCCGGC	1 cut(s)	231
NarI	GGCGCC	1 cut(s)	66
NciI	CCSGG	1 cut(s)	1484
NcoI	CCATGG	2 cut(s)	105, 1503
NdeII	GATC	5 cut(s)	174, 943, 1267, 1346, 1399
NgoMIV	GCCGGC	1 cut(s)	229
NlaIII	CATG	9 cut(s)	109, 203, 466, 853, 1159, 1278, 1384, 1507, 1536
NlaIV	GGNNCC	2 cut(s)	67, 111
NmuCI	GTSAC	1 cut(s)	711
NspI	RCATGY	3 cut(s)	1159, 1278, 1384
NspV	TTCGAA	1 cut(s)	143
PagI	TCATGA	1 cut(s)	199
PciI	ACATGT	2 cut(s)	1155, 1274
PciSI	GCTCTTC	1 cut(s)	289
PcsI	WCGNNNNNNNCGW	1 cut(s)	862
PdiI	GCCGGC	1 cut(s)	231
PdmI	GAANNNNTTC	1 cut(s)	756
PfeI	GAWTC	4 cut(s)	641, 752, 1037, 1562
PfoI	TCCNGGA	1 cut(s)	1482
PinAI	ACCGGT	1 cut(s)	715
PleI	GAGTC	1 cut(s)	445
PluTI	GGCGCC	1 cut(s)	69
PpsI	GAGTC	1 cut(s)	445
Ppu21I	YACGTR	1 cut(s)	1181
PscI	ACATGT	2 cut(s)	1155, 1274
PsiI	TTATAA	1 cut(s)	791
Psp6I	CCWGG	1 cut(s)	994
PspFI	CCCAGC	1 cut(s)	112
PspGI	CCWGG	1 cut(s)	994
PspN4I	GGNNCC	2 cut(s)	67, 111
PspPI	GGNCC	4 cut(s)	109, 132, 796, 830
PstNI	CAGNNNCTG	1 cut(s)	1357
PsuI	RGATCY	3 cut(s)	943, 1346, 1399
RsaI	GTAC	4 cut(s)	859, 951, 1183, 1540
RsaNI	GTAC	4 cut(s)	858, 950, 1182, 1539
SapI	GCTCTTC	1 cut(s)	289
Sau3AI	GATC	5 cut(s)	174, 943, 1267, 1346, 1399
Sau96I	GGNCC	4 cut(s)	109, 132, 796, 830
SchI	GAGTC	1 cut(s)	445
ScrFI	CCNGG	2 cut(s)	996, 1484
SduI	GDGCHC	2 cut(s)	412, 1067
SfaNI	GCATC	2 cut(s)	111, 1327
SfoI	GGCGCC	1 cut(s)	67
SfuI	TTCGAA	1 cut(s)	143
SinI	GGWCC	1 cut(s)	830
SmlI	CTYRAG	1 cut(s)	512
SmoI	CTYRAG	1 cut(s)	512
Sse9I	AATT	8 cut(s)	534, 608, 756, 774, 837, 988, 1297, 1518
SspDI	GGCGCC	1 cut(s)	65
SspMI	CTAG	2 cut(s)	117, 1305
StyD4I	CCNGG	2 cut(s)	994, 1482
StyI	CCWWGG	3 cut(s)	105, 1420, 1503
TaaI	ACNGT	1 cut(s)	1166
TaiI	ACGT	3 cut(s)	21, 37, 1183
TaqI	TCGA	5 cut(s)	143, 384, 565, 720, 1266
TaqII	GACCGA	1 cut(s)	916
TasI	AATT	8 cut(s)	534, 608, 756, 774, 837, 988, 1297, 1518
TatI	WGTACW	2 cut(s)	949, 1538
TauI	GCSGC	5 cut(s)	267, 324, 327, 330, 1093
TfiI	GAWTC	4 cut(s)	641, 752, 1037, 1562
TscAI	CASTG	6 cut(s)	694, 832, 1067, 1072, 1080, 1144
TseFI	GTSAC	1 cut(s)	711
TseI	GCWGC	6 cut(s)	226, 233, 416, 631, 887, 1070
Tsp45I	GTSAC	1 cut(s)	711
TspDTI	ATGAA	6 cut(s)	451, 629, 1029, 1307, 1521, 1542
TspGWI	ACGGA	3 cut(s)	183, 293, 1000
TspRI	CASTG	6 cut(s)	694, 832, 1067, 1072, 1080, 1144
VneI	GTGCAC	1 cut(s)	1063
VpaK11BI	GGWCC	1 cut(s)	830
XagI	CCTNNNNNAGG	1 cut(s)	27
XapI	RAATTY	2 cut(s)	608, 988
XceI	RCATGY	3 cut(s)	1159, 1278, 1384
XcmI	CCANNNNNNNNNTGG	2 cut(s)	536, 773
XmiI	GTMKAC	1 cut(s)	312
XmnI	GAANNNNTTC	1 cut(s)	756
XspI	CTAG	2 cut(s)	117, 1305
ZraI	GACGTC	1 cut(s)	19

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.