Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004712.1

Orthogroup ID

OG0005318

Physical Location & Seq

Genomic Coordinates Reverse (-)

138791 .. 143458

Gene Structure 4668 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004712.1_g000034.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2898 bp

atgaaggtccggcaagtgaagctccgcgagatccacaaatcggcgagcagcgccggaaagccgtccttctgctccgtcgtgtgggaccagcaaggcttccattccgtcaccgcctcctcctccgactcctcgatcgccgtccacaacgctcttctctccacatgtccgccgaagctcctccgcaaccaccgcgacggcgtcacggcgctcgctatgagccccaacgccacctgcctcgcctccggctccgtcgaccactccgtcaagctctacaagtttcctagtggagagtttgagactaatattaccagattcacgctgccaatacgtgcccttgcgttcaataagtcggggacactcttggccgctgctggtgatgatgatggcattaaacttattaacacagtagatggtacaatctcgaaggttctcaaagcacacaaaggacctgtaaccggcttaggttttgatccccaaagtgaatacatggcatccatcgattcaaccgggactgtagtatactgggaactccaatctggaagcacattgcacacccttaaaggcgtagctcctaactctggtttagaccttactgtattgaatgtactgagctggagtcctgatggacggatgttagctgttccgggagtgagaaatgatgttgtggtgtatgataaagacactgctgagaagctctttatattgagaggtgaacatacacagtctatttgtgccttggcttggtcacctaatggaaaatacttggctacctctggcttggataagcaggttctcatctgggatgttgatcggaagcaggatattggcaggcataaatttgatgagaggataacttgcttggcgtggaagccaattgacaatgtcctagctgtaattgattgtatgggcaggtatggtgtgtgggaagcagtgattccttcatcaatgaaatctcccactgaagatgttccgaatcaatctaataatggtctacttttgtttgatgaagacgaagacgagggtcaggagattagtacatctggtagtttaagtgatcttggtgaagatacatatgaggagtctaagccacctagccggaaaagactaagcaagcagtctgactctctgagagatttaaatgaggatgataatgatgactttggtctgtcccctaaagttgaatcccataaaaaagcacgtcggaatcatagtgaaagcactgacaaagggaatgagggattaagaagcagactgtcatctgccaggccaaaaatgcaggaggcatttcagccaggggccactcctgtgcagcctggaaaaaggcgctttttgtgctacaacatgcttggagctataactacgattgaatacgatgggtactcccatattgagatagattttcatgatacaagccgaggtccacgagttccatcaatgacagaccattttggttttacaatggcttcactgaatgagaatggaagtgtttttgcaaatccctgcaagggtgaaaagaacatgagcactctcatgtatcgcccatttagtagctgggcaaacaatagcgagtggtctatgcgattggaaggggaagaagtgaaggttgtggcacttggtacaacttgggtggcagcaattactagtcttaacttgatccgcatcttcaccattggtggtttgcagagacatgttctctccctcgatggacctgtggtgactgcatcaggcttcatggatgagcttgccattgtcactcatgcttcagacagtcttccctcaaatgaacaggtgcttgaatttagggtacttaacataaataatagtagccagcctcttagaggacgtctgcctctgactcctggttcaagtttaacatggtttggctttagtgaagaagggaaattaagctcctatgactccaagggtgtgctgagagtttttacaagtgaatatggtggcagttgtaaatatctgattggcagtgctagtaaagacaagaagtcagatgaaaactattgggtgatcggtttgaatgcaagacaactattttgtatagtttgcaaaagccccgagttatatccacaggtgttgcccaaaccagtgctcactctactaaatttttcaattcctcttgcatcctctgatctaggagcagaagcccttgaaaatgcatttatactaaacgacatgcatctcgtacagattcaaaagcaaatagaagaaatggatgctgtaggtttagacaccagttcacttgatgatgaagcttttaaattggaaacagctcaagatcaatgtatattgaggcttattggatcctgctgccatggagataagcttgtgagggctactgaacttgtgaagcatctatccctggaaaaatcagttaggggtgcaattaagattgttacttctctgaagctacctaacttggctgaaaggttcaatagcatattggaggaaaggttgctcaacgatagtaaagaaccattgcaaacaactgtcccaaacccaaactacaatgcatcaacctctaccgagaaaagtaagttatcagggaatgatattccattaccagcaccaagattgtcagctccttcgtttctaaagaaagccaaaacacaagaagctaatgttggaacagcgaaaacacaagaaaaacaaactgatcttgagaagtcgacgacgactgagagggaaactgctggtgcagaggtgaataatgcagcaggtgacatgaagaaggtaggggaaatgcctaaggcacaacagtcacctcgcccatctaatccatttctaaagcgatcaaacagtctagacatagagaagaaggaagaagtagatcaggtgaaagctcaccgcccatcgaatccgttcttcaagaaatcggtcaagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mcl1_mid WD40

Protein Analysis

965

Amino Acids

105.9

Weight (kDa)

6.19

Isoelectric Point (pI)

43.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005318)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G42660
fragaria_vesca	FvH4_5g13280 FvH4_5g13280 FvH4_5g13280 FvH4_5g13280 FvH4_5g13280
malus_domestica	MD06G1206600.v1.1 MD14G1217300.v1.1
prunus_persica	Prupe.5G211000_v2.0.a1 Prupe.5G211000_v2.0.a1 Prupe.5G211000_v2.0.a1 Prupe.5G211000_v2.0.a1 Prupe.5G211000_v2.0.a1
pyrus_communis	pycom06g18450 pycom14g18000
rosa_chinensis	RchiOBHm_Chr7g0183891
rosa_laevigata	RLG00000005014
rosa_multiflora	Rmu_co8106328.1_g000001 Rmu_co8463975.1_g000001 Rmu_sc0004712.1_g000034 Rmu_sc0007533.1_g000004
rosa_roxburghii	Rroxscaffold_3G00270110
rosa_rugosa	Rorug06G0461200
rosa_samantha	Rh1DG157600 Rh7AG062100 Rh7BG062300 Rh7CG063700 Rh7DG062100
rosa_wichuraiana	Rw7G005130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	239, 2720
AasI	GACNNNNNNGTC	1 cut(s)	260
AatII	GACGTC	1 cut(s)	1846
Acc36I	ACCTGC	4 cut(s)	239, 778, 900, 2720
AccI	GTMKAC	4 cut(s)	252, 519, 991, 2681
AccII	CGCG	2 cut(s)	27, 192
AciI	CCGC	8 cut(s)	25, 111, 167, 181, 190, 366, 1657, 2860
AclWI	GGATC	5 cut(s)	25, 464, 1648, 2310, 2323
AcoI	YGGCCR	1 cut(s)	363
AcsI	RAATTY	3 cut(s)	836, 1796, 2116
AcuI	CTGAAG	3 cut(s)	981, 1746, 2438
AcyI	GRCGYC	2 cut(s)	198, 1843
AfaI	GTAC	7 cut(s)	415, 606, 1036, 1379, 1618, 1806, 2199
AfiI	CCNNNNNNNGG	7 cut(s)	40, 81, 455, 578, 741, 1505, 1838
AflIII	ACRYGT	2 cut(s)	161, 1687
AhdI	GACNNNNNGTC	1 cut(s)	1999
AhlI	ACTAGT	1 cut(s)	1640
AjiI	CACGTC	1 cut(s)	1199
AjnI	CCWGG	5 cut(s)	1262, 1291, 1312, 1858, 2373
AjuI	GAANNNNNNNTTGG	2 cut(s)	2619, 2651
AleI	CACNNNNGTG	1 cut(s)	1304
Alw21I	GWGCWC	2 cut(s)	1526, 2106
Alw26I	GTCTC	2 cut(s)	290, 1678
AlwI	GGATC	5 cut(s)	25, 464, 1648, 2310, 2323
Ama87I	CYCGRG	1 cut(s)	2069
AoxI	GGCC	3 cut(s)	363, 1265, 1296
ApeKI	GCWGC	7 cut(s)	48, 319, 368, 1309, 1631, 2322, 2726
ApoI	RAATTY	3 cut(s)	836, 1796, 2116
ArsI	GACNNNNNNTTYG	2 cut(s)	2031, 2063
Asp700I	GAANNNNTTC	2 cut(s)	966, 2873
AspLEI	GCGC	3 cut(s)	53, 208, 1326
AspS9I	GGNCC	6 cut(s)	7, 85, 446, 1296, 1418, 1706
AsuC2I	CCSGG	2 cut(s)	508, 645
AvaI	CYCGRG	1 cut(s)	2069
AvaII	GGWCC	5 cut(s)	7, 85, 446, 1418, 1706
AxyI	CCTNAGG	1 cut(s)	2760
BaeGI	GKGCMC	1 cut(s)	334
BamHI	GGATCC	1 cut(s)	2315
BanII	GRGCYC	1 cut(s)	221
BauI	CACGAG	1 cut(s)	1422
BbsI	GAAGAC	3 cut(s)	1014, 1020, 1763
Bbv12I	GWGCWC	2 cut(s)	1526, 2106
BbvI	GCAGC	7 cut(s)	60, 306, 355, 1321, 1643, 2309, 2738
BccI	CCATC	9 cut(s)	377, 404, 503, 617, 1367, 1438, 1697, 2791, 2872
BceAI	ACGGC	4 cut(s)	46, 122, 211, 219
BciT130I	CCWGG	5 cut(s)	1264, 1293, 1314, 1860, 2375
BcnI	CCSGG	2 cut(s)	508, 645
BcoDI	GTCTC	2 cut(s)	290, 1678
BcuI	ACTAGT	1 cut(s)	1640
BfaI	CTAG	7 cut(s)	282, 887, 1092, 1641, 1986, 2147, 2816
BfmI	CTRYAG	2 cut(s)	513, 2232
BfoI	RGCGCY	3 cut(s)	54, 209, 1327
BfuAI	ACCTGC	4 cut(s)	239, 778, 900, 2720
BisI	GCNGC	8 cut(s)	49, 320, 366, 369, 1310, 1632, 2323, 2727
BlsI	GCNGC	8 cut(s)	50, 321, 367, 370, 1311, 1633, 2324, 2728
Bme1390I	CCNGG	7 cut(s)	508, 645, 1264, 1293, 1314, 1860, 2375
Bme18I	GGWCC	5 cut(s)	7, 85, 446, 1418, 1706
BmeRI	GACNNNNNGTC	1 cut(s)	1999
BmeT110I	CYCGRG	1 cut(s)	2069
BmgBI	CACGTC	1 cut(s)	1199
BmgT120I	GGNCC	6 cut(s)	7, 85, 446, 1296, 1418, 1706
BmiI	GGNNCC	4 cut(s)	86, 247, 1297, 2317
BmrFI	CCNGG	7 cut(s)	508, 645, 1264, 1293, 1314, 1860, 2375
BmrI	ACTGGG	1 cut(s)	532
BmsI	GCATC	8 cut(s)	500, 1668, 1730, 2144, 2200, 2218, 2374, 2534
BmuI	ACTGGG	1 cut(s)	532
BoxI	GACNNNNGTC	2 cut(s)	1020, 1161
BpiI	GAAGAC	3 cut(s)	1014, 1020, 1763
BpmI	CTGGAG	1 cut(s)	634
Bpu10I	CCTNAGC	1 cut(s)	460
BpuEI	CTTGAG	2 cut(s)	2271, 2693
BpuMI	CCSGG	2 cut(s)	508, 645
Bsa29I	ATCGAT	1 cut(s)	498
BsaAI	YACGTR	1 cut(s)	329
BsaBI	GATNNNNATC	2 cut(s)	807, 1658
BsaHI	GRCGYC	2 cut(s)	198, 1843
BsaJI	CCNNGG	6 cut(s)	735, 1292, 1414, 1920, 2326, 2373
BsaXI	ACNNNNNCTCC	2 cut(s)	2450, 2480
Bsc4I	CCNNNNNNNGG	7 cut(s)	40, 81, 455, 578, 741, 1505, 1838
Bse118I	RCCGGY	1 cut(s)	455
Bse1I	ACTGG	3 cut(s)	527, 2099, 2247
Bse21I	CCTNAGG	1 cut(s)	2760
Bse3DI	GCAATG	2 cut(s)	545, 2489
Bse8I	GATNNNNATC	2 cut(s)	807, 1658
BseBI	CCWGG	5 cut(s)	1264, 1293, 1314, 1860, 2375
BseCI	ATCGAT	1 cut(s)	498
BseDI	CCNNGG	6 cut(s)	735, 1292, 1414, 1920, 2326, 2373
BseGI	GGATG	7 cut(s)	491, 636, 808, 1150, 1741, 2135, 2233
BseJI	GATNNNNATC	2 cut(s)	807, 1658
BseLI	CCNNNNNNNGG	7 cut(s)	40, 81, 455, 578, 741, 1505, 1838
BseMI	GCAATG	2 cut(s)	545, 2489
BseMII	CTCAG	5 cut(s)	599, 678, 1118, 1922, 2682
BseNI	ACTGG	3 cut(s)	527, 2099, 2247
BseRI	GAGGAG	5 cut(s)	106, 109, 118, 167, 1091
BseSI	GKGCMC	1 cut(s)	334
BseXI	GCAGC	7 cut(s)	60, 306, 355, 1321, 1643, 2309, 2738
BseYI	CCCAGC	1 cut(s)	1551
BsgI	GTGCAG	2 cut(s)	1328, 2730
Bsh1236I	CGCG	2 cut(s)	27, 192
Bsh1285I	CGRYCG	1 cut(s)	135
BshFI	GGCC	3 cut(s)	365, 1267, 1298
BshVI	ATCGAT	1 cut(s)	498
BsiEI	CGRYCG	1 cut(s)	135
BsiHKAI	GWGCWC	2 cut(s)	1526, 2106
BsiHKCI	CYCGRG	1 cut(s)	2069
BsiSI	CCGG	7 cut(s)	10, 54, 243, 456, 507, 644, 1096
BslFI	GGGAC	5 cut(s)	98, 367, 523, 1153, 2489
BslI	CCNNNNNNNGG	7 cut(s)	40, 81, 455, 578, 741, 1505, 1838
BsmAI	GTCTC	2 cut(s)	290, 1678
BsmFI	GGGAC	5 cut(s)	98, 367, 523, 1153, 2489
BsmI	GAATGC	1 cut(s)	2038
BsnI	GGCC	3 cut(s)	365, 1267, 1298
BsoBI	CYCGRG	1 cut(s)	2069
Bsp1286I	GDGCHC	4 cut(s)	221, 334, 1526, 2106
Bsp19I	CCATGG	1 cut(s)	2326
BspACI	CCGC	8 cut(s)	25, 111, 167, 181, 190, 366, 1657, 2860
BspANI	GGCC	3 cut(s)	365, 1267, 1298
BspCNI	CTCAG	5 cut(s)	600, 679, 1119, 1923, 2683
BspDI	ATCGAT	1 cut(s)	498
BspFNI	CGCG	2 cut(s)	27, 192
BspHI	TCATGA	1 cut(s)	1402
BspLI	GGNNCC	4 cut(s)	86, 247, 1297, 2317
BspMI	ACCTGC	4 cut(s)	239, 778, 900, 2720
BspPI	GGATC	5 cut(s)	25, 464, 1648, 2310, 2323
BspQI	GCTCTTC	1 cut(s)	156
BsrDI	GCAATG	2 cut(s)	545, 2489
BsrFI	RCCGGY	1 cut(s)	455
BsrI	ACTGG	3 cut(s)	527, 2099, 2247
BssAI	RCCGGY	1 cut(s)	455
BssECI	CCNNGG	6 cut(s)	735, 1292, 1414, 1920, 2326, 2373
BssNAI	GTATAC	1 cut(s)	520
BssNI	GRCGYC	2 cut(s)	198, 1843
BssSI	CACGAG	1 cut(s)	1422
BssT1I	CCWWGG	3 cut(s)	735, 1920, 2326
Bst1107I	GTATAC	1 cut(s)	520
Bst2BI	CACGAG	1 cut(s)	1422
Bst2UI	CCWGG	5 cut(s)	1264, 1293, 1314, 1860, 2375
Bst4CI	ACNGT	9 cut(s)	406, 514, 595, 723, 1254, 1769, 2503, 2772, 2813
Bst6I	CTCTTC	1 cut(s)	156
BstACI	GRCGYC	2 cut(s)	198, 1843
BstBAI	YACGTR	1 cut(s)	329
BstC8I	GCNNGC	6 cut(s)	46, 210, 830, 1112, 1743, 1829
BstDSI	CCRYGG	1 cut(s)	2326
BstEII	GGTNACC	1 cut(s)	744
BstENI	CCTNNNNNAGG	1 cut(s)	1836
BstF5I	GGATG	7 cut(s)	491, 636, 808, 1150, 1741, 2135, 2233
BstFNI	CGCG	2 cut(s)	27, 192
BstH2I	RGCGCY	3 cut(s)	54, 209, 1327
BstHHI	GCGC	3 cut(s)	53, 208, 1326
BstMAI	GTCTC	2 cut(s)	290, 1678
BstMCI	CGRYCG	1 cut(s)	135
BstMWI	GCNNNNNNNGC	5 cut(s)	19, 50, 189, 1273, 1332
BstNI	CCWGG	5 cut(s)	1264, 1293, 1314, 1860, 2375
BstNSI	RCATGY	4 cut(s)	165, 1345, 1691, 2191
BstPAI	GACNNNNGTC	2 cut(s)	1020, 1161
BstPI	GGTNACC	1 cut(s)	744
BstSCI	CCNGG	7 cut(s)	506, 643, 1262, 1291, 1312, 1858, 2373
BstSFI	CTRYAG	2 cut(s)	513, 2232
BstSLI	GKGCMC	1 cut(s)	334
BstUI	CGCG	2 cut(s)	27, 192
BstV1I	GCAGC	7 cut(s)	60, 306, 355, 1321, 1643, 2309, 2738
BstV2I	GAAGAC	3 cut(s)	1014, 1020, 1763
BstX2I	RGATCY	2 cut(s)	30, 2315
BstYI	RGATCY	2 cut(s)	30, 2315
BstZ17I	GTATAC	1 cut(s)	520
Bsu15I	ATCGAT	1 cut(s)	498
Bsu36I	CCTNAGG	1 cut(s)	2760
BsuRI	GGCC	3 cut(s)	365, 1267, 1298
BsuTUI	ATCGAT	1 cut(s)	498
BtgI	CCRYGG	1 cut(s)	2326
BtrI	CACGTC	1 cut(s)	1199
BtsCI	GGATG	7 cut(s)	491, 636, 808, 1150, 1741, 2135, 2233
BtsI	GCAGTG	3 cut(s)	681, 936, 1987
BtsIMutI	CAGTG	7 cut(s)	681, 936, 957, 1218, 1466, 1987, 2106
BveI	ACCTGC	4 cut(s)	239, 778, 900, 2720
Cac8I	GCNNGC	6 cut(s)	46, 210, 830, 1112, 1743, 1829
CciI	TCATGA	1 cut(s)	1402
CfoI	GCGC	3 cut(s)	53, 208, 1326
Cfr10I	RCCGGY	1 cut(s)	455
Cfr13I	GGNCC	6 cut(s)	7, 85, 446, 1296, 1418, 1706
ClaI	ATCGAT	1 cut(s)	498
CseI	GACGC	1 cut(s)	187
Csp6I	GTAC	7 cut(s)	414, 605, 1035, 1378, 1617, 1805, 2198
CspCI	CAANNNNNGTGG	4 cut(s)	1608, 1643, 2070, 2105
CviQI	GTAC	7 cut(s)	414, 605, 1035, 1378, 1617, 1805, 2198
DraI	TTTAAA	2 cut(s)	1137, 2272
DrdI	GACNNNNNNGTC	1 cut(s)	260
DriI	GACNNNNNGTC	1 cut(s)	1999
DseDI	GACNNNNNNGTC	1 cut(s)	260
EaeI	YGGCCR	1 cut(s)	363
Eam1104I	CTCTTC	1 cut(s)	156
Eam1105I	GACNNNNNGTC	1 cut(s)	1999
EarI	CTCTTC	1 cut(s)	156
EciI	GGCGGA	1 cut(s)	156
Eco130I	CCWWGG	3 cut(s)	735, 1920, 2326
Eco24I	GRGCYC	1 cut(s)	221
Eco47I	GGWCC	5 cut(s)	7, 85, 446, 1418, 1706
Eco57I	CTGAAG	3 cut(s)	981, 1746, 2438
Eco81I	CCTNAGG	1 cut(s)	2760
Eco88I	CYCGRG	1 cut(s)	2069
Eco91I	GGTNACC	1 cut(s)	744
EcoNI	CCTNNNNNAGG	1 cut(s)	1836
EcoO109I	RGGNCCY	1 cut(s)	446
EcoO65I	GGTNACC	1 cut(s)	744
EcoRII	CCWGG	5 cut(s)	1262, 1291, 1312, 1858, 2373
EcoT14I	CCWWGG	3 cut(s)	735, 1920, 2326
EcoT22I	ATGCAT	3 cut(s)	2173, 2193, 2527
EcoT38I	GRGCYC	1 cut(s)	221
ErhI	CCWWGG	3 cut(s)	735, 1920, 2326
FalI	AAGNNNNNCTT	2 cut(s)	50, 82
FaqI	GGGAC	5 cut(s)	98, 367, 523, 1153, 2489
FauNDI	CATATG	1 cut(s)	1072
FblI	GTMKAC	4 cut(s)	252, 519, 991, 2681
Fnu4HI	GCNGC	8 cut(s)	49, 320, 366, 369, 1310, 1632, 2323, 2727
FokI	GGATG	7 cut(s)	478, 643, 815, 1157, 1748, 2122, 2240
FriOI	GRGCYC	1 cut(s)	221
Fsp4HI	GCNGC	8 cut(s)	49, 320, 366, 369, 1310, 1632, 2323, 2727
FspBI	CTAG	7 cut(s)	282, 887, 1092, 1641, 1986, 2147, 2816
GlaI	GCGC	3 cut(s)	52, 207, 1325
GluI	GCNGC	8 cut(s)	49, 320, 366, 369, 1310, 1632, 2323, 2727
GsaI	CCCAGC	1 cut(s)	1555
GsuI	CTGGAG	1 cut(s)	634
HaeII	RGCGCY	3 cut(s)	54, 209, 1327
HaeIII	GGCC	3 cut(s)	365, 1267, 1298
HapII	CCGG	7 cut(s)	10, 54, 243, 456, 507, 644, 1096
HgaI	GACGC	1 cut(s)	187
HhaI	GCGC	3 cut(s)	53, 208, 1326
Hin1I	GRCGYC	2 cut(s)	198, 1843
Hin6I	GCGC	3 cut(s)	51, 206, 1324
HinP1I	GCGC	3 cut(s)	51, 206, 1324
HincII	GTYRAC	2 cut(s)	253, 2682
HindII	GTYRAC	2 cut(s)	253, 2682
HindIII	AAGCTT	2 cut(s)	2265, 2336
HpaII	CCGG	7 cut(s)	10, 54, 243, 456, 507, 644, 1096
Hpy166II	GTNNAC	8 cut(s)	142, 253, 520, 713, 992, 1421, 2252, 2682
Hpy188III	TCNNGA	9 cut(s)	421, 537, 620, 1025, 1403, 2288, 2672, 2816, 2881
Hpy8I	GTNNAC	8 cut(s)	142, 253, 520, 713, 992, 1421, 2252, 2682
Hpy99I	CGWCG	6 cut(s)	80, 197, 254, 1203, 2686, 2689
HpyAV	CCTTC	9 cut(s)	76, 418, 948, 1580, 1594, 1889, 2607, 2737, 2824
HpyCH4III	ACNGT	9 cut(s)	406, 514, 595, 723, 1254, 1769, 2503, 2772, 2813
HpyCH4IV	ACGT	3 cut(s)	328, 1198, 1843
HpyF10VI	GCNNNNNNNGC	5 cut(s)	19, 50, 189, 1273, 1332
HpySE526I	ACGT	3 cut(s)	328, 1198, 1843
Hsp92I	GRCGYC	2 cut(s)	198, 1843
HspAI	GCGC	3 cut(s)	51, 206, 1324
LguI	GCTCTTC	1 cut(s)	156
LmnI	GCTCC	9 cut(s)	27, 77, 180, 251, 574, 1349, 1913, 2150, 2599
Lsp1109I	GCAGC	7 cut(s)	60, 306, 355, 1321, 1643, 2309, 2738
LweI	GCATC	8 cut(s)	500, 1668, 1730, 2144, 2200, 2218, 2374, 2534
MaeI	CTAG	7 cut(s)	282, 887, 1092, 1641, 1986, 2147, 2816
MaeII	ACGT	3 cut(s)	328, 1198, 1843
MaeIII	GTNAC	9 cut(s)	106, 199, 451, 744, 1714, 1750, 2407, 2732, 2772
MfeI	CAATTG	1 cut(s)	873
MflI	RGATCY	2 cut(s)	30, 2315
MhlI	GDGCHC	4 cut(s)	221, 334, 1526, 2106
MlyI	GAGTC	6 cut(s)	119, 625, 1088, 1115, 1849, 1910
MmeI	TCCRAC	3 cut(s)	147, 1181, 2617
Mph1103I	ATGCAT	3 cut(s)	2173, 2193, 2527
MroXI	GAANNNNTTC	2 cut(s)	966, 2873
MslI	CAYNNNNRTG	2 cut(s)	1304, 1529
MspA1I	CMGCKG	1 cut(s)	368
MspI	CCGG	7 cut(s)	10, 54, 243, 456, 507, 644, 1096
MspR9I	CCNGG	7 cut(s)	508, 645, 1264, 1293, 1314, 1860, 2375
MunI	CAATTG	1 cut(s)	873
Mva1269I	GAATGC	1 cut(s)	2038
MvaI	CCWGG	5 cut(s)	1264, 1293, 1314, 1860, 2375
MvnI	CGCG	2 cut(s)	27, 192
MwoI	GCNNNNNNNGC	5 cut(s)	19, 50, 189, 1273, 1332
NciI	CCSGG	2 cut(s)	508, 645
NcoI	CCATGG	1 cut(s)	2326
NdeI	CATATG	1 cut(s)	1072
NlaIV	GGNNCC	4 cut(s)	86, 247, 1297, 2317
NmeAIII	GCCGAG	1 cut(s)	1439
NmuCI	GTSAC	7 cut(s)	106, 199, 744, 1714, 1750, 2732, 2772
NsiI	ATGCAT	3 cut(s)	2173, 2193, 2527
NspI	RCATGY	4 cut(s)	165, 1345, 1691, 2191
OliI	CACNNNNGTG	1 cut(s)	1304
PagI	TCATGA	1 cut(s)	1402
PaqCI	CACCTGC	2 cut(s)	239, 2720
PciI	ACATGT	2 cut(s)	161, 1687
PciSI	GCTCTTC	1 cut(s)	156
PcsI	WCGNNNNNNNCGW	1 cut(s)	258
PctI	GAATGC	1 cut(s)	2038
PdmI	GAANNNNTTC	2 cut(s)	966, 2873
PfeI	GAWTC	8 cut(s)	312, 500, 934, 973, 1181, 1204, 2203, 2869
PflFI	GACNNNGTC	2 cut(s)	197, 881
PfoI	TCCNGGA	1 cut(s)	643
PkrI	GCNGC	8 cut(s)	50, 321, 367, 370, 1311, 1633, 2324, 2728
Ple19I	CGATCG	1 cut(s)	135
PleI	GAGTC	6 cut(s)	119, 624, 1087, 1115, 1849, 1910
PpsI	GAGTC	6 cut(s)	119, 624, 1087, 1115, 1849, 1910
Ppu21I	YACGTR	1 cut(s)	329
PpuMI	RGGWCCY	1 cut(s)	446
PscI	ACATGT	2 cut(s)	161, 1687
PshAI	GACNNNNGTC	2 cut(s)	1020, 1161
Psp5II	RGGWCCY	1 cut(s)	446
Psp6I	CCWGG	5 cut(s)	1262, 1291, 1312, 1858, 2373
PspEI	GGTNACC	1 cut(s)	744
PspFI	CCCAGC	1 cut(s)	1551
PspGI	CCWGG	5 cut(s)	1262, 1291, 1312, 1858, 2373
PspN4I	GGNNCC	4 cut(s)	86, 247, 1297, 2317
PspPI	GGNCC	6 cut(s)	7, 85, 446, 1296, 1418, 1706
PspPPI	RGGWCCY	1 cut(s)	446
PsuI	RGATCY	2 cut(s)	30, 2315
PsyI	GACNNNGTC	2 cut(s)	197, 881
PvuI	CGATCG	1 cut(s)	135
RsaI	GTAC	7 cut(s)	415, 606, 1036, 1379, 1618, 1806, 2199
RsaNI	GTAC	7 cut(s)	414, 605, 1035, 1378, 1617, 1805, 2198
RseI	CAYNNNNRTG	2 cut(s)	1304, 1529
SalI	GTCGAC	2 cut(s)	251, 2680
SapI	GCTCTTC	1 cut(s)	156
SatI	GCNGC	8 cut(s)	49, 320, 366, 369, 1310, 1632, 2323, 2727
Sau96I	GGNCC	6 cut(s)	7, 85, 446, 1296, 1418, 1706
SchI	GAGTC	6 cut(s)	119, 625, 1088, 1115, 1849, 1910
ScrFI	CCNGG	7 cut(s)	508, 645, 1264, 1293, 1314, 1860, 2375
SduI	GDGCHC	4 cut(s)	221, 334, 1526, 2106
SfaNI	GCATC	8 cut(s)	500, 1668, 1730, 2144, 2200, 2218, 2374, 2534
SfcI	CTRYAG	2 cut(s)	513, 2232
SinI	GGWCC	5 cut(s)	7, 85, 446, 1418, 1706
SmiI	ATTTAAAT	1 cut(s)	1137
SmiMI	CAYNNNNRTG	2 cut(s)	1304, 1529
SmlI	CTYRAG	2 cut(s)	2286, 2672
SmoI	CTYRAG	2 cut(s)	2286, 2672
SpeI	ACTAGT	1 cut(s)	1640
SsiI	CCGC	8 cut(s)	25, 111, 167, 181, 190, 366, 1657, 2860
SspI	AATATT	1 cut(s)	304
SspMI	CTAG	7 cut(s)	282, 887, 1092, 1641, 1986, 2147, 2816
StyD4I	CCNGG	7 cut(s)	506, 643, 1262, 1291, 1312, 1858, 2373
StyI	CCWWGG	3 cut(s)	735, 1920, 2326
SwaI	ATTTAAAT	1 cut(s)	1137
TaaI	ACNGT	9 cut(s)	406, 514, 595, 723, 1254, 1769, 2503, 2772, 2813
TaiI	ACGT	3 cut(s)	331, 1201, 1846
TaqI	TCGA	7 cut(s)	131, 252, 422, 498, 1701, 2681, 2867
TaqII	GACCGA	1 cut(s)	2878
TatI	WGTACW	2 cut(s)	604, 1034
TauI	GCSGC	1 cut(s)	368
TfiI	GAWTC	8 cut(s)	312, 500, 934, 973, 1181, 1204, 2203, 2869
TscAI	CASTG	7 cut(s)	688, 936, 964, 1225, 1473, 1987, 2106
TseFI	GTSAC	7 cut(s)	106, 199, 744, 1714, 1750, 2732, 2772
TseI	GCWGC	7 cut(s)	48, 319, 368, 1309, 1631, 2322, 2726
Tsp45I	GTSAC	7 cut(s)	106, 199, 744, 1714, 1750, 2732, 2772
TspGWI	ACGGA	6 cut(s)	64, 94, 238, 250, 643, 2862
TspRI	CASTG	7 cut(s)	688, 936, 964, 1225, 1473, 1987, 2106
Tth111I	GACNNNGTC	2 cut(s)	197, 881
VpaK11BI	GGWCC	5 cut(s)	7, 85, 446, 1418, 1706
XagI	CCTNNNNNAGG	1 cut(s)	1836
XapI	RAATTY	3 cut(s)	836, 1796, 2116
XbaI	TCTAGA	1 cut(s)	2815
XceI	RCATGY	4 cut(s)	165, 1345, 1691, 2191
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1548
XmiI	GTMKAC	4 cut(s)	252, 519, 991, 2681
XmnI	GAANNNNTTC	2 cut(s)	966, 2873
XspI	CTAG	7 cut(s)	282, 887, 1092, 1641, 1986, 2147, 2816
ZraI	GACGTC	1 cut(s)	1844
Zsp2I	ATGCAT	3 cut(s)	2173, 2193, 2527

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.