Rmu_sc0004805.1_g000050

SAC3 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004805.1
Physical Location & Seq
Forward (+)
247748 .. 253275
5528 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004805.1_g000050.1.cds

Sequence Viewer

Length: 1440 bp
atggagagaagaggccgtcgaaaccgttcttcttcttcttctcggggttcaagatcctggagcagaggtggaactagttccgccgagaaagtggaaaacgtcgccgtttccgatgttcccgccatagtgggtacttgcactttgatgtgcccagaagcagaaagggcacagcgggagcgccttcgcgatttagctacctttgagaggctgaatggaaatccagctcgctcatcgccatccattgcagttaaaaagtttttcagaactatgtccaccaaacaagttcaagcatcagatgttcggccgctccctgttttggaggatactttaaattacctcttagagttgtttgattctaaagactatccttttgaagtgattcacgacttcctctttgatcgaacaaggtccataaggcaagatcttagcatgcagaatattggtggcgagaaagcaattcacatgtatcagaaaaaggttaaatttcatatcatctctcttcataagcttagaggttgcagcagtcaaaatacttctccaatgcatcacctcaacatggagcagcttgcaaagaccttgacatctctatttaatctgtatggcgcaaatcgtcattccaattctactaatgaaaatgaggctgagttttgttctttttatgtgctacttcatcttggttctcatagccaacccctgggggagtcactttcttggtggtttagtcatgtgccttcttcgataatcaagtcaaaggaaatgcatttttcccgcaagattttacgatattttcggatgggtaactataaacgtttcttaagtactgtagcagctgaggcatcttatcttcaatactgcattattgagccttatgttgatgaggttcgagttttagctgtgtcatgcatcaatagtggtggctacaagcttcatccatatcctctgtcgcatttatccaaactcttgattatgaaggaatcagatttggaatcttttctcaaatcctgtggtcttcaaatttgcactgatgaagaaggacataatctgttgcccactaagcaaacgaccttttgtcaacccaaggatgggtctcaaaactacaggttttgggatggttggaatggcttacctgttggtccggccgccgaaggttcaggtggtcaggtagatgtggagggttggttgctctgctggtctaaccagaagccggatgctgcagatcagaggatgggacatccagttagggccgttgggtttggggtcgagtctaggttatacttcaggttgaatttgttgatccaattgaaagtcaattcagcagctgggtttgtgtctttgggcctggttgtcttcagcacacgatggaaggtgttttaccaccctcatttcttacttaacattgggcaggtgaggttgggggcttttacactatggcgttggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

479

Amino Acids

54.48

Weight (kDa)

9.29

Isoelectric Point (pI)

51.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1393
Acc36I ACCTGC 1 cut(s) 1393
AccB7I CCANNNNNTGG 1 cut(s) 694
AccBSI CCGCTC 1 cut(s) 307
AccII CGCG 1 cut(s) 186
AciI CCGC 6 cut(s) 81, 120, 172, 305, 769, 1140
AclI AACGTT 1 cut(s) 808
AclWI GGATC 2 cut(s) 48, 1288
AcoI YGGCCR 2 cut(s) 302, 1137
AcsI RAATTY 3 cut(s) 482, 1014, 1285
AcuI CTGAAG 2 cut(s) 1261, 1333
AfaI GTAC 2 cut(s) 133, 820
AfiI CCNNNNNNNGG 7 cut(s) 204, 316, 556, 694, 1082, 1083, 1204
AflII CTTAAG 1 cut(s) 814
AflIII ACRYGT 1 cut(s) 462
AgsI TTSAA 7 cut(s) 51, 287, 374, 848, 1013, 1285, 1303
AhdI GACNNNNNGTC 1 cut(s) 1068
AhlI ACTAGT 1 cut(s) 74
AjnI CCWGG 3 cut(s) 56, 693, 1338
AluBI AGCT 8 cut(s) 194, 224, 508, 565, 830, 893, 925, 1319
AluI AGCT 8 cut(s) 194, 224, 508, 565, 830, 893, 925, 1319
Alw26I GTCTC 1 cut(s) 1092
AlwI GGATC 2 cut(s) 48, 1288
AlwNI CAGNNNCTG 1 cut(s) 1319
Ama87I CYCGRG 1 cut(s) 42
AoxI GGCC 5 cut(s) 13, 302, 1137, 1242, 1336
ApeKI GCWGC 5 cut(s) 519, 562, 827, 1211, 1316
ApoI RAATTY 3 cut(s) 482, 1014, 1285
ArsI GACNNNNNNTTYG 4 cut(s) 353, 377, 385, 409
Asp700I GAANNNNTTC 4 cut(s) 25, 76, 378, 990
AspLEI GCGC 2 cut(s) 180, 605
AspS9I GGNCC 4 cut(s) 408, 1133, 1242, 1336
AsuHPI GGTGA 2 cut(s) 539, 1417
AvaI CYCGRG 1 cut(s) 42
AvaII GGWCC 2 cut(s) 408, 1133
BaeGI GKGCMC 2 cut(s) 152, 169
BarI GAAGNNNNNNTAC 2 cut(s) 1355, 1387
BbsI GAAGAC 2 cut(s) 1001, 1339
BbvCI CCTCAGC 1 cut(s) 831
BbvI GCAGC 5 cut(s) 531, 574, 839, 1198, 1328
BccI CCATC 6 cut(s) 244, 787, 1076, 1103, 1219, 1353
BceAI ACGGC 2 cut(s) 89, 1229
BciT130I CCWGG 3 cut(s) 58, 695, 1340
BciVI GTATCC 1 cut(s) 316
BcoDI GTCTC 1 cut(s) 1092
BcuI ACTAGT 1 cut(s) 74
BfaI CTAG 2 cut(s) 75, 1266
BfmI CTRYAG 3 cut(s) 822, 1096, 1212
BfoI RGCGCY 1 cut(s) 181
BfrI CTTAAG 1 cut(s) 814
BfuAI ACCTGC 1 cut(s) 1393
BfuI GTATCC 1 cut(s) 316
BglII AGATCT 1 cut(s) 421
BisI GCNGC 7 cut(s) 305, 520, 563, 828, 1140, 1212, 1317
BlsI GCNGC 7 cut(s) 306, 521, 564, 829, 1141, 1213, 1318
BmcAI AGTACT 1 cut(s) 820
Bme1390I CCNGG 3 cut(s) 58, 695, 1340
Bme18I GGWCC 2 cut(s) 408, 1133
BmeRI GACNNNNNGTC 1 cut(s) 1068
BmeT110I CYCGRG 1 cut(s) 42
BmgT120I GGNCC 4 cut(s) 408, 1133, 1242, 1336
BmrFI CCNGG 3 cut(s) 58, 695, 1340
BmsI GCATC 5 cut(s) 299, 553, 845, 912, 1198
BpiI GAAGAC 2 cut(s) 1001, 1339
BpmI CTGGAG 1 cut(s) 79
Bpu10I CCTNAGC 1 cut(s) 831
BsaI GGTCTC 1 cut(s) 1092
BsaJI CCNNGG 3 cut(s) 693, 694, 1077
BsaXI ACNNNNNCTCC 4 cut(s) 52, 82, 1163, 1193
Bsc4I CCNNNNNNNGG 7 cut(s) 204, 316, 556, 694, 1082, 1083, 1204
Bse1I ACTGG 1 cut(s) 1235
Bse3DI GCAATG 1 cut(s) 240
BseBI CCWGG 3 cut(s) 58, 695, 1340
BseDI CCNNGG 3 cut(s) 693, 694, 1077
BseGI GGATG 8 cut(s) 236, 798, 928, 1087, 1114, 1213, 1230, 1231
BseLI CCNNNNNNNGG 7 cut(s) 204, 316, 556, 694, 1082, 1083, 1204
BseMI GCAATG 1 cut(s) 240
BseMII CTCAG 2 cut(s) 633, 822
BseNI ACTGG 1 cut(s) 1235
BseSI GKGCMC 2 cut(s) 152, 169
BseX3I CGGCCG 2 cut(s) 302, 1137
BseXI GCAGC 5 cut(s) 531, 574, 839, 1198, 1328
BseYI CCCAGC 1 cut(s) 1319
Bsh1236I CGCG 1 cut(s) 186
Bsh1285I CGRYCG 2 cut(s) 305, 1140
BshFI GGCC 5 cut(s) 15, 304, 1139, 1244, 1338
BsiEI CGRYCG 2 cut(s) 305, 1140
BsiHKCI CYCGRG 1 cut(s) 42
BsiSI CCGG 2 cut(s) 1136, 1205
BslFI GGGAC 1 cut(s) 1242
BslI CCNNNNNNNGG 7 cut(s) 204, 316, 556, 694, 1082, 1083, 1204
BsmAI GTCTC 1 cut(s) 1092
BsmFI GGGAC 1 cut(s) 1242
BsnI GGCC 5 cut(s) 15, 304, 1139, 1244, 1338
Bso31I GGTCTC 1 cut(s) 1092
BsoBI CYCGRG 1 cut(s) 42
Bsp1286I GDGCHC 2 cut(s) 152, 169
Bsp143I GATC 5 cut(s) 53, 397, 421, 1216, 1293
Bsp68I TCGCGA 1 cut(s) 186
BspACI CCGC 6 cut(s) 81, 120, 172, 305, 769, 1140
BspANI GGCC 5 cut(s) 15, 304, 1139, 1244, 1338
BspCNI CTCAG 2 cut(s) 634, 823
BspFNI CGCG 1 cut(s) 186
BspMAI CTGCAG 1 cut(s) 1216
BspMI ACCTGC 1 cut(s) 1393
BspPI GGATC 2 cut(s) 48, 1288
BspTI CTTAAG 1 cut(s) 814
BspTNI GGTCTC 1 cut(s) 1092
BsrBI CCGCTC 1 cut(s) 307
BsrDI GCAATG 1 cut(s) 240
BsrI ACTGG 1 cut(s) 1235
BssECI CCNNGG 3 cut(s) 693, 694, 1077
BssMI GATC 5 cut(s) 53, 397, 421, 1216, 1293
BssT1I CCWWGG 1 cut(s) 1077
Bst2UI CCWGG 3 cut(s) 58, 695, 1340
Bst4CI ACNGT 2 cut(s) 26, 823
Bst6I CTCTTC 2 cut(s) 4, 504
BstAFI CTTAAG 1 cut(s) 814
BstC8I GCNNGC 3 cut(s) 226, 431, 567
BstDEI CTNAG 6 cut(s) 340, 425, 509, 642, 831, 1053
BstENI CCTNNNNNAGG 1 cut(s) 202
BstF5I GGATG 8 cut(s) 236, 798, 928, 1087, 1114, 1213, 1230, 1231
BstFNI CGCG 1 cut(s) 186
BstH2I RGCGCY 1 cut(s) 181
BstHHI GCGC 2 cut(s) 180, 605
BstKTI GATC 5 cut(s) 56, 400, 424, 1219, 1296
BstMAI GTCTC 1 cut(s) 1092
BstMBI GATC 5 cut(s) 53, 397, 421, 1216, 1293
BstMCI CGRYCG 2 cut(s) 305, 1140
BstMWI GCNNNNNNNGC 3 cut(s) 164, 833, 1054
BstNI CCWGG 3 cut(s) 58, 695, 1340
BstNSI RCATGY 2 cut(s) 433, 466
BstSCI CCNGG 3 cut(s) 56, 693, 1338
BstSFI CTRYAG 3 cut(s) 822, 1096, 1212
BstSLI GKGCMC 2 cut(s) 152, 169
BstUI CGCG 1 cut(s) 186
BstV1I GCAGC 5 cut(s) 531, 574, 839, 1198, 1328
BstV2I GAAGAC 2 cut(s) 1001, 1339
BstX2I RGATCY 2 cut(s) 53, 421
BstYI RGATCY 2 cut(s) 53, 421
BstZI CGGCCG 2 cut(s) 302, 1137
BsuI GTATCC 1 cut(s) 316
BsuRI GGCC 5 cut(s) 15, 304, 1139, 1244, 1338
BtgZI GCGATG 1 cut(s) 216
BtsCI GGATG 8 cut(s) 236, 798, 928, 1087, 1114, 1213, 1230, 1231
BtsIMutI CAGTG 1 cut(s) 1020
BtuMI TCGCGA 1 cut(s) 186
BveI ACCTGC 1 cut(s) 1393
Cac8I GCNNGC 3 cut(s) 226, 431, 567
CaiI CAGNNNCTG 1 cut(s) 1319
CfoI GCGC 2 cut(s) 180, 605
Cfr13I GGNCC 4 cut(s) 408, 1133, 1242, 1336
Csp6I GTAC 2 cut(s) 132, 819
CspCI CAANNNNNGTGG 4 cut(s) 895, 930, 985, 1020
CviAII CATG 5 cut(s) 430, 463, 556, 725, 900
CviQI GTAC 2 cut(s) 132, 819
DdeI CTNAG 6 cut(s) 340, 425, 509, 642, 831, 1053
DpnI GATC 5 cut(s) 55, 399, 423, 1218, 1295
DpnII GATC 5 cut(s) 53, 397, 421, 1216, 1293
DraI TTTAAA 1 cut(s) 330
DriI GACNNNNNGTC 1 cut(s) 1068
EaeI YGGCCR 2 cut(s) 302, 1137
EagI CGGCCG 2 cut(s) 302, 1137
Eam1104I CTCTTC 2 cut(s) 4, 504
Eam1105I GACNNNNNGTC 1 cut(s) 1068
EarI CTCTTC 2 cut(s) 4, 504
EciI GGCGGA 1 cut(s) 70
EclXI CGGCCG 2 cut(s) 302, 1137
Eco130I CCWWGG 1 cut(s) 1077
Eco31I GGTCTC 1 cut(s) 1092
Eco47I GGWCC 2 cut(s) 408, 1133
Eco52I CGGCCG 2 cut(s) 302, 1137
Eco57I CTGAAG 2 cut(s) 1261, 1333
Eco88I CYCGRG 1 cut(s) 42
EcoNI CCTNNNNNAGG 1 cut(s) 202
EcoRII CCWGG 3 cut(s) 56, 693, 1338
EcoT14I CCWWGG 1 cut(s) 1077
EcoT22I ATGCAT 3 cut(s) 546, 762, 905
ErhI CCWWGG 1 cut(s) 1077
FaeI CATG 5 cut(s) 433, 466, 559, 728, 903
FaqI GGGAC 1 cut(s) 1242
FatI CATG 5 cut(s) 429, 462, 555, 724, 899
FauI CCCGC 3 cut(s) 127, 165, 776
Fnu4HI GCNGC 7 cut(s) 305, 520, 563, 828, 1140, 1212, 1317
FokI GGATG 8 cut(s) 223, 805, 915, 1094, 1121, 1218, 1220, 1237
Fsp4HI GCNGC 7 cut(s) 305, 520, 563, 828, 1140, 1212, 1317
FspBI CTAG 2 cut(s) 75, 1266
GlaI GCGC 2 cut(s) 179, 604
GluI GCNGC 7 cut(s) 305, 520, 563, 828, 1140, 1212, 1317
GsaI CCCAGC 1 cut(s) 1323
GsuI CTGGAG 1 cut(s) 79
HaeII RGCGCY 1 cut(s) 181
HaeIII GGCC 5 cut(s) 15, 304, 1139, 1244, 1338
HapII CCGG 2 cut(s) 1136, 1205
HhaI GCGC 2 cut(s) 180, 605
Hin1II CATG 5 cut(s) 433, 466, 559, 728, 903
Hin6I GCGC 2 cut(s) 178, 603
HinP1I GCGC 2 cut(s) 178, 603
HincII GTYRAC 1 cut(s) 1073
HindII GTYRAC 1 cut(s) 1073
HindIII AAGCTT 2 cut(s) 506, 923
HinfI GANTC 6 cut(s) 353, 379, 701, 974, 986, 1262
HpaII CCGG 2 cut(s) 1136, 1205
HphI GGTGA 2 cut(s) 539, 1417
Hpy166II GTNNAC 2 cut(s) 273, 1073
Hpy188I TCNGA 7 cut(s) 112, 263, 295, 471, 792, 979, 1221
Hpy188III TCNNGA 4 cut(s) 51, 185, 383, 961
Hpy8I GTNNAC 2 cut(s) 273, 1073
Hpy99I CGWCG 2 cut(s) 21, 104
HpyAV CCTTC 6 cut(s) 191, 741, 964, 1025, 1139, 1357
HpyCH4III ACNGT 2 cut(s) 26, 823
HpyCH4IV ACGT 2 cut(s) 99, 808
HpyF10VI GCNNNNNNNGC 3 cut(s) 164, 833, 1054
HpyF3I CTNAG 6 cut(s) 340, 425, 509, 642, 831, 1053
HpySE526I ACGT 2 cut(s) 99, 808
Hsp92II CATG 5 cut(s) 433, 466, 559, 728, 903
HspAI GCGC 2 cut(s) 178, 603
Kzo9I GATC 5 cut(s) 53, 397, 421, 1216, 1293
LmnI GCTCC 4 cut(s) 60, 175, 312, 559
Lsp1109I GCAGC 5 cut(s) 531, 574, 839, 1198, 1328
LweI GCATC 5 cut(s) 299, 553, 845, 912, 1198
MaeI CTAG 2 cut(s) 75, 1266
MaeII ACGT 2 cut(s) 99, 808
MaeIII GTNAC 2 cut(s) 702, 797
MalI GATC 5 cut(s) 55, 399, 423, 1218, 1295
MbiI CCGCTC 1 cut(s) 307
MboI GATC 5 cut(s) 53, 397, 421, 1216, 1293
MfeI CAATTG 1 cut(s) 1298
MflI RGATCY 2 cut(s) 53, 421
MhlI GDGCHC 2 cut(s) 152, 169
MluCI AATT 8 cut(s) 331, 456, 482, 619, 1014, 1285, 1298, 1309
MlyI GAGTC 2 cut(s) 710, 1271
MmeI TCCRAC 1 cut(s) 1094
Mph1103I ATGCAT 3 cut(s) 546, 762, 905
MroXI GAANNNNTTC 4 cut(s) 25, 76, 378, 990
MseI TTAA 6 cut(s) 249, 329, 480, 591, 815, 1392
MslI CAYNNNNRTG 1 cut(s) 143
MspA1I CMGCKG 3 cut(s) 172, 830, 1319
MspCI CTTAAG 1 cut(s) 814
MspI CCGG 2 cut(s) 1136, 1205
MspR9I CCNGG 3 cut(s) 58, 695, 1340
MunI CAATTG 1 cut(s) 1298
MvaI CCWGG 3 cut(s) 58, 695, 1340
MvnI CGCG 1 cut(s) 186
MwoI GCNNNNNNNGC 3 cut(s) 164, 833, 1054
NdeII GATC 5 cut(s) 53, 397, 421, 1216, 1293
NlaIII CATG 5 cut(s) 433, 466, 559, 728, 903
NmeAIII GCCGAG 1 cut(s) 109
NmuCI GTSAC 1 cut(s) 702
NruI TCGCGA 1 cut(s) 186
NsiI ATGCAT 3 cut(s) 546, 762, 905
NspI RCATGY 2 cut(s) 433, 466
PaeI GCATGC 1 cut(s) 433
PaqCI CACCTGC 1 cut(s) 1393
PasI CCCWGGG 1 cut(s) 694
PciI ACATGT 1 cut(s) 462
PcsI WCGNNNNNNNCGW 1 cut(s) 108
PdmI GAANNNNTTC 4 cut(s) 25, 76, 378, 990
PfeI GAWTC 4 cut(s) 353, 379, 974, 986
PflMI CCANNNNNTGG 1 cut(s) 694
PfoI TCCNGGA 1 cut(s) 56
PkrI GCNGC 7 cut(s) 306, 521, 564, 829, 1141, 1213, 1318
PleI GAGTC 2 cut(s) 709, 1270
PpsI GAGTC 2 cut(s) 709, 1270
PscI ACATGT 1 cut(s) 462
Psp1406I AACGTT 1 cut(s) 808
Psp6I CCWGG 3 cut(s) 56, 693, 1338
PspFI CCCAGC 1 cut(s) 1319
PspGI CCWGG 3 cut(s) 56, 693, 1338
PspPI GGNCC 4 cut(s) 408, 1133, 1242, 1336
PstI CTGCAG 1 cut(s) 1216
PstNI CAGNNNCTG 1 cut(s) 1319
PsuI RGATCY 2 cut(s) 53, 421
PvuII CAGCTG 2 cut(s) 830, 1319
RruI TCGCGA 1 cut(s) 186
RsaI GTAC 2 cut(s) 133, 820
RsaNI GTAC 2 cut(s) 132, 819
RseI CAYNNNNRTG 1 cut(s) 143
SaqAI TTAA 6 cut(s) 249, 329, 480, 591, 815, 1392
SatI GCNGC 7 cut(s) 305, 520, 563, 828, 1140, 1212, 1317
Sau3AI GATC 5 cut(s) 53, 397, 421, 1216, 1293
Sau96I GGNCC 4 cut(s) 408, 1133, 1242, 1336
ScaI AGTACT 1 cut(s) 820
SchI GAGTC 2 cut(s) 710, 1271
ScrFI CCNGG 3 cut(s) 58, 695, 1340
SduI GDGCHC 2 cut(s) 152, 169
SfaNI GCATC 5 cut(s) 299, 553, 845, 912, 1198
SfcI CTRYAG 3 cut(s) 822, 1096, 1212
SinI GGWCC 2 cut(s) 408, 1133
SmiMI CAYNNNNRTG 1 cut(s) 143
SmlI CTYRAG 1 cut(s) 814
SmoI CTYRAG 1 cut(s) 814
SpeI ACTAGT 1 cut(s) 74
SphI GCATGC 1 cut(s) 433
Sse9I AATT 8 cut(s) 331, 456, 482, 619, 1014, 1285, 1298, 1309
SsiI CCGC 6 cut(s) 81, 120, 172, 305, 769, 1140
SspI AATATT 1 cut(s) 439
SspMI CTAG 2 cut(s) 75, 1266
StyD4I CCNGG 3 cut(s) 56, 693, 1338
StyI CCWWGG 1 cut(s) 1077
TaaI ACNGT 2 cut(s) 26, 823
TaiI ACGT 2 cut(s) 102, 811
TaqI TCGA 5 cut(s) 19, 400, 737, 883, 1260
TasI AATT 8 cut(s) 331, 456, 482, 619, 1014, 1285, 1298, 1309
TatI WGTACW 1 cut(s) 818
TauI GCSGC 2 cut(s) 307, 1142
TfiI GAWTC 4 cut(s) 353, 379, 974, 986
Tru1I TTAA 6 cut(s) 249, 329, 480, 591, 815, 1392
Tru9I TTAA 6 cut(s) 249, 329, 480, 591, 815, 1392
TscAI CASTG 1 cut(s) 1027
TseFI GTSAC 1 cut(s) 702
TseI GCWGC 5 cut(s) 519, 562, 827, 1211, 1316
Tsp45I GTSAC 1 cut(s) 702
TspDTI ATGAA 7 cut(s) 476, 491, 645, 659, 917, 983, 1041
TspRI CASTG 1 cut(s) 1027
Van91I CCANNNNNTGG 1 cut(s) 694
Vha464I CTTAAG 1 cut(s) 814
VpaK11BI GGWCC 2 cut(s) 408, 1133
XagI CCTNNNNNAGG 1 cut(s) 202
XapI RAATTY 3 cut(s) 482, 1014, 1285
XceI RCATGY 2 cut(s) 433, 466
XmnI GAANNNNTTC 4 cut(s) 25, 76, 378, 990
XspI CTAG 2 cut(s) 75, 1266
ZrmI AGTACT 1 cut(s) 820
Zsp2I ATGCAT 3 cut(s) 546, 762, 905
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.