Rmu_sc0005098.1_g000006

Wings apart-like protein regulation of heterochromatin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005098.1
OG0009354
Physical Location & Seq
Forward (+)
16599 .. 23489
6891 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2793 bp
atgtccgagctcggttccattccgataaccaagtggccagttcattccaatttccgaactctccagtcttccaattctaccctccaatttcaaatcttgttccaccccagcccccgaaacggcgccgtagcgatgattgtgaggacctacggccggcgcaagggaggaggaccagtaggccttcccaggacctattccgactcaaccctaaacgacgccgttcgcggcgacgacgacgatgacctcagcaacgacccgtttagaatctctctctcccaagataccccccaattcaattttaatttctcgtcgtcgcaagactcgtcgtcgcagtggtcgcagttcgattcggagccctacccccccgaattgaaaaggcccagttcgcgaaacggcgacgttttgaggaggccgtcgaagaaggcgaagaaggccgctgcggcgctggcgacggcgacgttgatggaggcgcaggagttcggggagatgatggagcacgtggacgaggtcaatttcgcgctggatgggctgaggaatggtcagccggttcggatcagaagggcgagcttgttgtctttgttggggatttgcggcacgcctcagcagagacggcttctgaggactcaggggatggcaaaaacgataattgaggctatattgggtctcagttttgatgatgcacctagcgatctggctgctgcaactattttctatgttttgacttgtgatggtcaggatgatcctcttttggaatcaccaagctgtattaattttttgattaggttttgcaaaccaattgtctcaaacatcactgaagataaagcaccaaaaattggacgaaagcttttagcattgcgtttgagtgctgacatctcgcattgtgcaccaaaaagattagactccagctcggctgctattctttccaaagtacatgagatccttgttacttgcaaggaaatgaaaccaagttctgctgatgatggtgaaatgagcatgccggagttaagccccaaatggatagctttgcttactatggagaaagcttgcttatctactatttctcttgaagaaacaactggtacagtaaggaaggctgggggcaactttaaggaaaaattacgagagcttggaggccttgatgctgtctttgaggtgtccatgacttgccattccgaaatggagggttggctaaaaggtaattctccttctacttgggaaaaggaaatcaacatggtgcggagcctggttctgcttttgaaatgcttgaagatcatggaaaatgccacattcttgagtaaagaaaatcagagccacttgctagaaatgaaaggaaagttggttcccatggaaaagcccatatctttcacagaacttgttataagtaccatcagtatcctatcagggctttatctacataaaagtttatctgctgcttccaatgatgacatgtctcataatctttcaaatgggaatgaatatgcttctgaggaaagctcccacaaatgtcagagcaatggattggtgtccacttctcgctcggtattttctgtatccaattcagaaactaccagcacgtctatgactgacacctatttgttgaagacaagacttagttcttccagaaatggctcatctagtggtacagcaagccatttaagtgaggcaacccgcacatttagctatggttcccggaaaaatgctggttccagtcagagatcctatatttctaaaaactctataattgatctttcggaggagagccaagatccttttgcatttagctgtggttccggtgaggatgctggtctcagtcagagatcctatatttctgaagactctaaagttgacctttcacaggagagtcaagatccttttgcatttgatgaagatgatattgaaccttctcagtgggacatattatctggcaagaaaaagatttgtcgaacgcgaaaaaatggagaagcttacagagaacttgatgatggttgccagttgcagctgattatgagccaagcagaatcaagttttggggaagaccatgatatgcctgagacatcctatgcgggtgctgttagtaaagagggttccagtcttttggctgactgccttcttactgctgttaaggttctgatgaacttggcaaatgagaatcctgttggttgtcagcaaattgctgcaaatggaggactggagaccatgtcttccttgattgctagccactttccttcattttcatctcccttcagcgagagaaatgacaatacttcaagcattgaactggataatcagaatggtagacatcttaccgatcaagagctagattttcttgtagctattttgggcctgcttgtaaacttgattgagaaagatggtcaaaacagatcacggctcgctgcagtcactgttcacttacctatttctgatgggtttgaagaggaaagtcacaaggatctaattctgctaatatgctctatattcctggctaatcaaggtgcaggcgagggatccgaagaaggaaagactttgccaaatgatgaggcagctgtgttacaaggagaacaagaagctgagaaaatgatagtggaagcttatgctgccctgcttttagcattcctttcaactgaaagtaagggtgtacgcgatgccattgctgactgtctcccagatcgcaacctggctatcctagtacctgtgttggacagatttgtggcatttcacttgacgttaaacatgatctcaccggagactcataaagtcgtaagtgaagtaattgaatcatgtaggatacgataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WAPL

Protein Analysis

930

Amino Acids

101.67

Weight (kDa)

5.1

Isoelectric Point (pI)

55.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WAPL PF07814 153 - 521 2.3e-46 Wings apart-like protein regulation of heterochromatin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1379
AccB1I GGYRCC 1 cut(s) 122
AccB7I CCANNNNNTGG 1 cut(s) 833
AccI GTMKAC 1 cut(s) 2296
AccII CGCG 5 cut(s) 225, 388, 518, 1948, 2640
AciI CCGC 7 cut(s) 225, 435, 440, 591, 1237, 1669, 2063
AcoI YGGCCR 2 cut(s) 35, 151
AcuI CTGAAG 3 cut(s) 834, 1851, 2227
AcvI CACGTG 1 cut(s) 499
AcyI GRCGYC 2 cut(s) 123, 216
AfaI GTAC 6 cut(s) 930, 1081, 1384, 1642, 2637, 2688
AfiI CCNNNNNNNGG 5 cut(s) 119, 153, 160, 833, 1855
AflIII ACRYGT 1 cut(s) 1446
AhdI GACNNNNNGTC 1 cut(s) 325
AjiI CACGTC 1 cut(s) 1575
AjnI CCWGG 4 cut(s) 185, 1242, 2478, 2673
AjuI GAANNNNNNNTTGG 4 cut(s) 1319, 1351, 2010, 2042
AloI GAACNNNNNNTCC 2 cut(s) 1323, 1355
Alw21I GWGCWC 3 cut(s) 12, 498, 886
Alw26I GTCTC 9 cut(s) 601, 668, 805, 1455, 1811, 2045, 2186, 2663, 2738
Alw44I GTGCAC 1 cut(s) 882
AlwNI CAGNNNCTG 1 cut(s) 2402
AoxI GGCC 8 cut(s) 35, 151, 178, 377, 410, 432, 1132, 2341
ApaLI GTGCAC 1 cut(s) 882
ArsI GACNNNNNNTTYG 2 cut(s) 783, 815
AseI ATTAAT 1 cut(s) 768
AspLEI GCGC 5 cut(s) 125, 159, 445, 472, 520
AspS9I GGNCC 5 cut(s) 144, 170, 189, 378, 2341
AsuC2I CCSGG 1 cut(s) 1690
AsuHPI GGTGA 4 cut(s) 747, 995, 1805, 2730
AsuNHI GCTAGC 1 cut(s) 2213
AvaII GGWCC 3 cut(s) 144, 170, 189
BaeGI GKGCMC 1 cut(s) 886
BalI TGGCCA 1 cut(s) 37
BamHI GGATCC 1 cut(s) 2504
BanI GGYRCC 1 cut(s) 122
BanII GRGCYC 2 cut(s) 12, 357
BarI GAAGNNNNNNTAC 2 cut(s) 1189, 1221
BbrPI CACGTG 1 cut(s) 499
BbsI GAAGAC 5 cut(s) 60, 1607, 1839, 2040, 2193
Bbv12I GWGCWC 3 cut(s) 12, 498, 886
BbvCI CCTCAGC 3 cut(s) 245, 530, 600
BceAI ACGGC 9 cut(s) 110, 136, 166, 203, 397, 409, 468, 626, 2402
BcgI CGANNNNNNTGC 4 cut(s) 677, 711, 2630, 2664
BciT130I CCWGG 4 cut(s) 187, 1244, 2480, 2675
BciVI GTATCC 3 cut(s) 1403, 1561, 2778
BcnI CCSGG 1 cut(s) 1690
BcoDI GTCTC 9 cut(s) 601, 668, 805, 1455, 1811, 2045, 2186, 2663, 2738
BfaI CTAG 6 cut(s) 684, 1319, 1635, 2214, 2318, 2684
BfmI CTRYAG 1 cut(s) 2394
BfoI RGCGCY 2 cut(s) 126, 446
BfuI GTATCC 3 cut(s) 1403, 1561, 2778
BglI GCCNNNNNGGC 1 cut(s) 440
Bme1390I CCNGG 5 cut(s) 187, 1244, 1690, 2480, 2675
Bme18I GGWCC 3 cut(s) 144, 170, 189
BmeRI GACNNNNNGTC 1 cut(s) 325
BmgBI CACGTC 1 cut(s) 1575
BmgT120I GGNCC 5 cut(s) 144, 170, 189, 378, 2341
BmrFI CCNGG 5 cut(s) 187, 1244, 1690, 2480, 2675
BmrI ACTGGG 1 cut(s) 375
BmsI GCATC 4 cut(s) 667, 1129, 1789, 2632
BmtI GCTAGC 1 cut(s) 2217
BmuI ACTGGG 1 cut(s) 375
BpiI GAAGAC 5 cut(s) 60, 1607, 1839, 2040, 2193
BplI GAGNNNNNCTC 2 cut(s) 1478, 1510
BpmI CTGGAG 3 cut(s) 47, 886, 2210
Bpu10I CCTNAGC 3 cut(s) 245, 530, 600
BpuEI CTTGAG 1 cut(s) 1312
BpuMI CCSGG 1 cut(s) 1690
BsaAI YACGTR 1 cut(s) 499
BsaHI GRCGYC 2 cut(s) 123, 216
BsaI GGTCTC 3 cut(s) 668, 1811, 2186
BsaJI CCNNGG 2 cut(s) 185, 1344
BsaWI WCCGGW 2 cut(s) 1790, 2740
BsaXI ACNNNNNCTCC 4 cut(s) 159, 189, 2183, 2213
Bsc4I CCNNNNNNNGG 5 cut(s) 119, 153, 160, 833, 1855
Bse118I RCCGGY 2 cut(s) 153, 544
Bse3DI GCAATG 3 cut(s) 851, 1519, 2646
BseBI CCWGG 4 cut(s) 187, 1244, 2480, 2675
BseDI CCNNGG 2 cut(s) 185, 1344
BseGI GGATG 5 cut(s) 529, 636, 742, 1804, 2054
BseLI CCNNNNNNNGG 5 cut(s) 119, 153, 160, 833, 1855
BseMI GCAATG 3 cut(s) 851, 1519, 2646
BseRI GAGGAG 3 cut(s) 180, 421, 1769
BseSI GKGCMC 1 cut(s) 886
BseX3I CGGCCG 1 cut(s) 151
BseYI CCCAGC 2 cut(s) 107, 1094
BsgI GTGCAG 1 cut(s) 2514
Bsh1236I CGCG 5 cut(s) 225, 388, 518, 1948, 2640
Bsh1285I CGRYCG 1 cut(s) 154
BshFI GGCC 8 cut(s) 37, 153, 180, 379, 412, 434, 1134, 2343
BshNI GGYRCC 1 cut(s) 122
BsiEI CGRYCG 1 cut(s) 154
BsiHKAI GWGCWC 3 cut(s) 12, 498, 886
BsiSI CCGG 6 cut(s) 154, 545, 998, 1690, 1791, 2741
BslFI GGGAC 1 cut(s) 1925
BslI CCNNNNNNNGG 5 cut(s) 119, 153, 160, 833, 1855
BsmAI GTCTC 9 cut(s) 601, 668, 805, 1455, 1811, 2045, 2186, 2663, 2738
BsmBI CGTCTC 1 cut(s) 601
BsmFI GGGAC 1 cut(s) 1925
BsmI GAATGC 1 cut(s) 2609
BsnI GGCC 8 cut(s) 37, 153, 180, 379, 412, 434, 1134, 2343
Bso31I GGTCTC 3 cut(s) 668, 1811, 2186
Bsp1286I GDGCHC 4 cut(s) 12, 357, 498, 886
Bsp19I CCATGG 1 cut(s) 1344
Bsp68I TCGCGA 1 cut(s) 388
BspACI CCGC 7 cut(s) 225, 435, 440, 591, 1237, 1669, 2063
BspANI GGCC 8 cut(s) 37, 153, 180, 379, 412, 434, 1134, 2343
BspFNI CGCG 5 cut(s) 225, 388, 518, 1948, 2640
BspMAI CTGCAG 1 cut(s) 2398
BspOI GCTAGC 1 cut(s) 2217
BspT107I GGYRCC 1 cut(s) 122
BspTNI GGTCTC 3 cut(s) 668, 1811, 2186
BsrDI GCAATG 3 cut(s) 851, 1519, 2646
BsrFI RCCGGY 2 cut(s) 153, 544
BssAI RCCGGY 2 cut(s) 153, 544
BssECI CCNNGG 2 cut(s) 185, 1344
BssNI GRCGYC 2 cut(s) 123, 216
BssT1I CCWWGG 1 cut(s) 1344
Bst2UI CCWGG 4 cut(s) 187, 1244, 2480, 2675
Bst4CI ACNGT 3 cut(s) 1084, 2404, 2657
Bst6I CTCTTC 1 cut(s) 2427
BstACI GRCGYC 2 cut(s) 123, 216
BstBAI YACGTR 1 cut(s) 499
BstDSI CCRYGG 1 cut(s) 1344
BstENI CCTNNNNNAGG 1 cut(s) 1853
BstF5I GGATG 5 cut(s) 529, 636, 742, 1804, 2054
BstFNI CGCG 5 cut(s) 225, 388, 518, 1948, 2640
BstH2I RGCGCY 2 cut(s) 126, 446
BstHHI GCGC 5 cut(s) 125, 159, 445, 472, 520
BstMAI GTCTC 9 cut(s) 601, 668, 805, 1455, 1811, 2045, 2186, 2663, 2738
BstMCI CGRYCG 1 cut(s) 154
BstMWI GCNNNNNNNGC 9 cut(s) 337, 385, 431, 440, 446, 526, 610, 1677, 2594
BstNI CCWGG 4 cut(s) 187, 1244, 2480, 2675
BstNSI RCATGY 2 cut(s) 997, 1450
BstSCI CCNGG 5 cut(s) 185, 1242, 1688, 2478, 2673
BstSFI CTRYAG 1 cut(s) 2394
BstSLI GKGCMC 1 cut(s) 886
BstUI CGCG 5 cut(s) 225, 388, 518, 1948, 2640
BstV2I GAAGAC 5 cut(s) 60, 1607, 1839, 2040, 2193
BstX2I RGATCY 7 cut(s) 936, 1715, 1765, 1817, 1867, 2449, 2504
BstXI CCANNNNNNTGG 1 cut(s) 2095
BstYI RGATCY 7 cut(s) 936, 1715, 1765, 1817, 1867, 2449, 2504
BstZI CGGCCG 1 cut(s) 151
BsuI GTATCC 3 cut(s) 1403, 1561, 2778
BsuRI GGCC 8 cut(s) 37, 153, 180, 379, 412, 434, 1134, 2343
BtgI CCRYGG 1 cut(s) 1344
BtgZI GCGATG 2 cut(s) 146, 2655
BtrI CACGTC 1 cut(s) 1575
BtsCI GGATG 5 cut(s) 529, 636, 742, 1804, 2054
BtsI GCAGTG 1 cut(s) 338
BtsIMutI CAGTG 4 cut(s) 338, 810, 1913, 2400
BtuMI TCGCGA 1 cut(s) 388
CaiI CAGNNNCTG 1 cut(s) 2402
CfoI GCGC 5 cut(s) 125, 159, 445, 472, 520
Cfr10I RCCGGY 2 cut(s) 153, 544
Cfr13I GGNCC 5 cut(s) 144, 170, 189, 378, 2341
CseI GACGC 1 cut(s) 224
Csp6I GTAC 6 cut(s) 929, 1080, 1383, 1641, 2636, 2687
CviQI GTAC 6 cut(s) 929, 1080, 1383, 1641, 2636, 2687
DinI GGCGCC 1 cut(s) 124
DriI GACNNNNNGTC 1 cut(s) 325
EaeI YGGCCR 2 cut(s) 35, 151
EagI CGGCCG 1 cut(s) 151
Eam1104I CTCTTC 1 cut(s) 2427
Eam1105I GACNNNNNGTC 1 cut(s) 325
EarI CTCTTC 1 cut(s) 2427
Ecl136II GAGCTC 1 cut(s) 10
EclXI CGGCCG 1 cut(s) 151
Eco130I CCWWGG 1 cut(s) 1344
Eco147I AGGCCT 2 cut(s) 180, 1134
Eco24I GRGCYC 2 cut(s) 12, 357
Eco31I GGTCTC 3 cut(s) 668, 1811, 2186
Eco47I GGWCC 3 cut(s) 144, 170, 189
Eco52I CGGCCG 1 cut(s) 151
Eco53kI GAGCTC 1 cut(s) 10
Eco57I CTGAAG 3 cut(s) 834, 1851, 2227
Eco72I CACGTG 1 cut(s) 499
EcoICRI GAGCTC 1 cut(s) 10
EcoNI CCTNNNNNAGG 1 cut(s) 1853
EcoO109I RGGNCCY 2 cut(s) 144, 189
EcoRII CCWGG 4 cut(s) 185, 1242, 2478, 2673
EcoT14I CCWWGG 1 cut(s) 1344
EcoT38I GRGCYC 2 cut(s) 12, 357
EgeI GGCGCC 1 cut(s) 124
EheI GGCGCC 1 cut(s) 124
ErhI CCWWGG 1 cut(s) 1344
Esp3I CGTCTC 1 cut(s) 601
FalI AAGNNNNNCTT 2 cut(s) 1833, 1865
FaqI GGGAC 1 cut(s) 1925
FauI CCCGC 2 cut(s) 1676, 2056
FblI GTMKAC 1 cut(s) 2296
FokI GGATG 5 cut(s) 536, 643, 749, 1811, 2041
FriOI GRGCYC 2 cut(s) 12, 357
FspBI CTAG 6 cut(s) 684, 1319, 1635, 2214, 2318, 2684
GlaI GCGC 5 cut(s) 124, 158, 444, 471, 519
GsaI CCCAGC 2 cut(s) 111, 1098
GsuI CTGGAG 3 cut(s) 47, 886, 2210
HaeII RGCGCY 2 cut(s) 126, 446
HaeIII GGCC 8 cut(s) 37, 153, 180, 379, 412, 434, 1134, 2343
HapII CCGG 6 cut(s) 154, 545, 998, 1690, 1791, 2741
HgaI GACGC 1 cut(s) 224
HhaI GCGC 5 cut(s) 125, 159, 445, 472, 520
Hin1I GRCGYC 2 cut(s) 123, 216
Hin6I GCGC 5 cut(s) 123, 157, 443, 470, 518
HinP1I GCGC 5 cut(s) 123, 157, 443, 470, 518
HincII GTYRAC 1 cut(s) 1846
HindII GTYRAC 1 cut(s) 1846
HindIII AAGCTT 4 cut(s) 842, 1041, 1962, 2586
HpaII CCGG 6 cut(s) 154, 545, 998, 1690, 1791, 2741
HphI GGTGA 4 cut(s) 747, 995, 1805, 2730
Hpy166II GTNNAC 8 cut(s) 502, 884, 1527, 1846, 2297, 2353, 2407, 2636
Hpy188III TCNNGA 7 cut(s) 387, 734, 1064, 1291, 1620, 1865, 2312
Hpy8I GTNNAC 8 cut(s) 502, 884, 1527, 1846, 2297, 2353, 2407, 2636
HpyCH4III ACNGT 3 cut(s) 1084, 2404, 2657
HpyCH4IV ACGT 5 cut(s) 399, 458, 498, 1574, 2723
HpyF10VI GCNNNNNNNGC 9 cut(s) 337, 385, 431, 440, 446, 526, 610, 1677, 2594
HpySE526I ACGT 5 cut(s) 399, 458, 498, 1574, 2723
Hsp92I GRCGYC 2 cut(s) 123, 216
HspAI GCGC 5 cut(s) 123, 157, 443, 470, 518
KasI GGCGCC 1 cut(s) 122
KroI GCCGGC 1 cut(s) 153
KroNI GCCGGC 1 cut(s) 155
LmnI GCTCC 4 cut(s) 352, 493, 1239, 1499
LweI GCATC 4 cut(s) 667, 1129, 1789, 2632
MaeI CTAG 6 cut(s) 684, 1319, 1635, 2214, 2318, 2684
MaeII ACGT 5 cut(s) 399, 458, 498, 1574, 2723
MaeIII GTNAC 4 cut(s) 943, 2398, 2441, 2547
MfeI CAATTG 1 cut(s) 795
MflI RGATCY 7 cut(s) 936, 1715, 1765, 1817, 1867, 2449, 2504
MhlI GDGCHC 4 cut(s) 12, 357, 498, 886
MlsI TGGCCA 1 cut(s) 37
MluNI TGGCCA 1 cut(s) 37
Mly113I GGCGCC 1 cut(s) 123
MlyI GAGTC 7 cut(s) 194, 314, 616, 893, 1829, 1870, 2740
MmeI TCCRAC 2 cut(s) 222, 2676
Mox20I TGGCCA 1 cut(s) 37
MroNI GCCGGC 1 cut(s) 153
MscI TGGCCA 1 cut(s) 37
MseI TTAA 7 cut(s) 300, 768, 1004, 1107, 1655, 2121, 2726
MslI CAYNNNNRTG 2 cut(s) 1577, 1656
Msp20I TGGCCA 1 cut(s) 37
MspA1I CMGCKG 3 cut(s) 437, 1999, 2543
MspI CCGG 6 cut(s) 154, 545, 998, 1690, 1791, 2741
MspR9I CCNGG 5 cut(s) 187, 1244, 1690, 2480, 2675
MunI CAATTG 1 cut(s) 795
Mva1269I GAATGC 1 cut(s) 2609
MvaI CCWGG 4 cut(s) 187, 1244, 2480, 2675
MvnI CGCG 5 cut(s) 225, 388, 518, 1948, 2640
MwoI GCNNNNNNNGC 9 cut(s) 337, 385, 431, 440, 446, 526, 610, 1677, 2594
NaeI GCCGGC 1 cut(s) 155
NarI GGCGCC 1 cut(s) 123
NciI CCSGG 1 cut(s) 1690
NcoI CCATGG 1 cut(s) 1344
NgoMIV GCCGGC 1 cut(s) 153
NheI GCTAGC 1 cut(s) 2213
NmeAIII GCCGAG 1 cut(s) 887
NmuCI GTSAC 2 cut(s) 2398, 2441
NruI TCGCGA 1 cut(s) 388
NspI RCATGY 2 cut(s) 997, 1450
PaeI GCATGC 1 cut(s) 997
PceI AGGCCT 2 cut(s) 180, 1134
PciI ACATGT 1 cut(s) 1446
PcsI WCGNNNNNNNCGW 2 cut(s) 320, 422
PctI GAATGC 1 cut(s) 2609
PdiI GCCGGC 1 cut(s) 155
PfeI GAWTC 6 cut(s) 264, 347, 752, 2018, 2149, 2774
PflFI GACNNNGTC 2 cut(s) 506, 2197
PflMI CCANNNNNTGG 1 cut(s) 833
PfoI TCCNGGA 1 cut(s) 1688
PleI GAGTC 7 cut(s) 194, 314, 616, 893, 1829, 1869, 2740
PluTI GGCGCC 1 cut(s) 126
PmaCI CACGTG 1 cut(s) 499
PmlI CACGTG 1 cut(s) 499
PpsI GAGTC 7 cut(s) 194, 314, 616, 893, 1829, 1869, 2740
Ppu21I YACGTR 1 cut(s) 499
PpuMI RGGWCCY 2 cut(s) 144, 189
PscI ACATGT 1 cut(s) 1446
PshBI ATTAAT 1 cut(s) 768
PsiI TTATAA 1 cut(s) 1379
Psp124BI GAGCTC 1 cut(s) 12
Psp5II RGGWCCY 2 cut(s) 144, 189
Psp6I CCWGG 4 cut(s) 185, 1242, 2478, 2673
PspCI CACGTG 1 cut(s) 499
PspFI CCCAGC 2 cut(s) 107, 1094
PspGI CCWGG 4 cut(s) 185, 1242, 2478, 2673
PspPI GGNCC 5 cut(s) 144, 170, 189, 378, 2341
PspPPI RGGWCCY 2 cut(s) 144, 189
PsrI GAACNNNNNNTAC 2 cut(s) 2068, 2100
PstI CTGCAG 1 cut(s) 2398
PstNI CAGNNNCTG 1 cut(s) 2402
PsuI RGATCY 7 cut(s) 936, 1715, 1765, 1817, 1867, 2449, 2504
PsyI GACNNNGTC 2 cut(s) 506, 2197
PvuII CAGCTG 2 cut(s) 1999, 2543
RruI TCGCGA 1 cut(s) 388
RsaI GTAC 6 cut(s) 930, 1081, 1384, 1642, 2637, 2688
RsaNI GTAC 6 cut(s) 929, 1080, 1383, 1641, 2636, 2687
RseI CAYNNNNRTG 2 cut(s) 1577, 1656
SacI GAGCTC 1 cut(s) 12
SaqAI TTAA 7 cut(s) 300, 768, 1004, 1107, 1655, 2121, 2726
Sau96I GGNCC 5 cut(s) 144, 170, 189, 378, 2341
SchI GAGTC 7 cut(s) 194, 314, 616, 893, 1829, 1870, 2740
ScrFI CCNGG 5 cut(s) 187, 1244, 1690, 2480, 2675
SduI GDGCHC 4 cut(s) 12, 357, 498, 886
SfaNI GCATC 4 cut(s) 667, 1129, 1789, 2632
SfcI CTRYAG 1 cut(s) 2394
SfoI GGCGCC 1 cut(s) 124
SinI GGWCC 3 cut(s) 144, 170, 189
SmiMI CAYNNNNRTG 2 cut(s) 1577, 1656
SmlI CTYRAG 1 cut(s) 1291
SmoI CTYRAG 1 cut(s) 1291
SphI GCATGC 1 cut(s) 997
SseBI AGGCCT 2 cut(s) 180, 1134
SsiI CCGC 7 cut(s) 225, 435, 440, 591, 1237, 1669, 2063
SspDI GGCGCC 1 cut(s) 122
SspMI CTAG 6 cut(s) 684, 1319, 1635, 2214, 2318, 2684
SstI GAGCTC 1 cut(s) 12
StuI AGGCCT 2 cut(s) 180, 1134
StyD4I CCNGG 5 cut(s) 185, 1242, 1688, 2478, 2673
StyI CCWWGG 1 cut(s) 1344
TaaI ACNGT 3 cut(s) 1084, 2404, 2657
TaiI ACGT 5 cut(s) 402, 461, 501, 1577, 2726
TaqI TCGA 3 cut(s) 345, 416, 1942
TatI WGTACW 1 cut(s) 928
TauI GCSGC 4 cut(s) 228, 437, 443, 594
TfiI GAWTC 6 cut(s) 264, 347, 752, 2018, 2149, 2774
Tru1I TTAA 7 cut(s) 300, 768, 1004, 1107, 1655, 2121, 2726
Tru9I TTAA 7 cut(s) 300, 768, 1004, 1107, 1655, 2121, 2726
TscAI CASTG 4 cut(s) 338, 817, 1913, 2407
TseFI GTSAC 2 cut(s) 2398, 2441
Tsp45I GTSAC 2 cut(s) 2398, 2441
TspDTI ATGAA 8 cut(s) 32, 974, 1340, 1488, 1899, 2147, 2217, 2223
TspRI CASTG 4 cut(s) 338, 817, 1913, 2407
Tth111I GACNNNGTC 2 cut(s) 506, 2197
Van91I CCANNNNNTGG 1 cut(s) 833
VneI GTGCAC 1 cut(s) 882
VpaK11BI GGWCC 3 cut(s) 144, 170, 189
VspI ATTAAT 1 cut(s) 768
XagI CCTNNNNNAGG 1 cut(s) 1853
XceI RCATGY 2 cut(s) 997, 1450
XmiI GTMKAC 1 cut(s) 2296
XspI CTAG 6 cut(s) 684, 1319, 1635, 2214, 2318, 2684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.