Ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17510 |
| fragaria_vesca | FvH4_5g19870 |
| malus_domestica | MD04G1057500.v1.1 MD06G1051100.v1.1 |
| prunus_persica | Prupe.5G061500_v2.0.a1 |
| pyrus_communis | pycom06g04330 |
| rosa_chinensis | RchiOBHm_Chr7g0204661 RchiOBHm_Chr7g0214021 |
| rosa_laevigata | RLG00000003440 |
| rosa_multiflora | Rmu_sc0007104.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00245580 Rroxscaffold_3G00252890 Rroxscaffold_4G00300770 |
| rosa_rugosa | Rorug07G0085400 Rorug07G0145300 |
| rosa_samantha | Rh7AG215300 Rh7BG212500 Rh7BG272200 Rh7CG228400 Rh7CG297700 Rh7DG223000 |
| rosa_wichuraiana | Rw7G018660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 396 |
| AciI | CCGC | 1 cut(s) | 27 |
| AcsI | RAATTY | 1 cut(s) | 366 |
| AcuI | CTGAAG | 2 cut(s) | 231, 321 |
| AfaI | GTAC | 1 cut(s) | 171 |
| AgsI | TTSAA | 2 cut(s) | 50, 98 |
| AluBI | AGCT | 1 cut(s) | 53 |
| AluI | AGCT | 1 cut(s) | 53 |
| ApoI | RAATTY | 1 cut(s) | 366 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 74, 156 |
| AsuHPI | GGTGA | 1 cut(s) | 365 |
| BbsI | GAAGAC | 1 cut(s) | 86 |
| BccI | CCATC | 2 cut(s) | 30, 131 |
| BfmI | CTRYAG | 1 cut(s) | 13 |
| BmiI | GGNNCC | 1 cut(s) | 159 |
| BmrI | ACTGGG | 1 cut(s) | 16 |
| BmsI | GCATC | 1 cut(s) | 216 |
| BmuI | ACTGGG | 1 cut(s) | 16 |
| BpiI | GAAGAC | 1 cut(s) | 86 |
| BsaJI | CCNNGG | 1 cut(s) | 282 |
| Bse1I | ACTGG | 2 cut(s) | 22, 73 |
| Bse3DI | GCAATG | 1 cut(s) | 295 |
| BseDI | CCNNGG | 1 cut(s) | 282 |
| BseGI | GGATG | 2 cut(s) | 109, 142 |
| BseMI | GCAATG | 1 cut(s) | 295 |
| BseNI | ACTGG | 2 cut(s) | 22, 73 |
| BsmI | GAATGC | 1 cut(s) | 119 |
| Bsp143I | GATC | 1 cut(s) | 342 |
| BspACI | CCGC | 1 cut(s) | 27 |
| BspLI | GGNNCC | 1 cut(s) | 159 |
| BsrDI | GCAATG | 1 cut(s) | 295 |
| BsrI | ACTGG | 2 cut(s) | 22, 73 |
| BssECI | CCNNGG | 1 cut(s) | 282 |
| BssMI | GATC | 1 cut(s) | 342 |
| Bst4CI | ACNGT | 2 cut(s) | 131, 283 |
| Bst6I | CTCTTC | 1 cut(s) | 210 |
| BstC8I | GCNNGC | 1 cut(s) | 318 |
| BstDEI | CTNAG | 2 cut(s) | 30, 148 |
| BstDSI | CCRYGG | 1 cut(s) | 282 |
| BstF5I | GGATG | 2 cut(s) | 109, 142 |
| BstKTI | GATC | 1 cut(s) | 345 |
| BstMBI | GATC | 1 cut(s) | 342 |
| BstNSI | RCATGY | 1 cut(s) | 320 |
| BstSFI | CTRYAG | 1 cut(s) | 13 |
| BstV2I | GAAGAC | 1 cut(s) | 86 |
| BtgI | CCRYGG | 1 cut(s) | 282 |
| BtsCI | GGATG | 2 cut(s) | 109, 142 |
| Cac8I | GCNNGC | 1 cut(s) | 318 |
| Csp6I | GTAC | 1 cut(s) | 170 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 277, 312 |
| CviAII | CATG | 2 cut(s) | 317, 405 |
| CviJI | RGCY | 4 cut(s) | 5, 40, 53, 166 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 40, 53, 166 |
| CviQI | GTAC | 1 cut(s) | 170 |
| DdeI | CTNAG | 2 cut(s) | 30, 148 |
| DpnI | GATC | 1 cut(s) | 344 |
| DpnII | GATC | 1 cut(s) | 342 |
| Eam1104I | CTCTTC | 1 cut(s) | 210 |
| EarI | CTCTTC | 1 cut(s) | 210 |
| Eco57I | CTGAAG | 2 cut(s) | 231, 321 |
| EcoT22I | ATGCAT | 1 cut(s) | 406 |
| FaeI | CATG | 2 cut(s) | 320, 408 |
| FaiI | YATR | 7 cut(s) | 68, 120, 272, 318, 396, 402, 406 |
| FatI | CATG | 2 cut(s) | 316, 404 |
| FokI | GGATG | 2 cut(s) | 116, 149 |
| Hin1II | CATG | 2 cut(s) | 320, 408 |
| HphI | GGTGA | 1 cut(s) | 365 |
| Hpy166II | GTNNAC | 1 cut(s) | 127 |
| Hpy188I | TCNGA | 2 cut(s) | 340, 365 |
| Hpy188III | TCNNGA | 3 cut(s) | 47, 59, 98 |
| Hpy8I | GTNNAC | 1 cut(s) | 127 |
| HpyCH4III | ACNGT | 2 cut(s) | 131, 283 |
| HpyCH4IV | ACGT | 1 cut(s) | 123 |
| HpyCH4V | TGCA | 3 cut(s) | 229, 316, 404 |
| HpyF3I | CTNAG | 2 cut(s) | 30, 148 |
| HpySE526I | ACGT | 1 cut(s) | 123 |
| Hsp92II | CATG | 2 cut(s) | 320, 408 |
| Kzo9I | GATC | 1 cut(s) | 342 |
| LpnPI | CCDG | 4 cut(s) | 35, 86, 180, 230 |
| LweI | GCATC | 1 cut(s) | 216 |
| MaeII | ACGT | 1 cut(s) | 123 |
| MalI | GATC | 1 cut(s) | 344 |
| MboI | GATC | 1 cut(s) | 342 |
| MboII | GAAGA | 3 cut(s) | 86, 224, 227 |
| MluCI | AATT | 2 cut(s) | 366, 397 |
| MmeI | TCCRAC | 1 cut(s) | 304 |
| MnlI | CCTC | 3 cut(s) | 54, 94, 100 |
| Mph1103I | ATGCAT | 1 cut(s) | 406 |
| MroXI | GAANNNNTTC | 2 cut(s) | 74, 156 |
| MseI | TTAA | 2 cut(s) | 197, 233 |
| Mva1269I | GAATGC | 1 cut(s) | 119 |
| NdeII | GATC | 1 cut(s) | 342 |
| NlaIII | CATG | 2 cut(s) | 320, 408 |
| NlaIV | GGNNCC | 1 cut(s) | 159 |
| NsiI | ATGCAT | 1 cut(s) | 406 |
| NspI | RCATGY | 1 cut(s) | 320 |
| PaeI | GCATGC | 1 cut(s) | 320 |
| PctI | GAATGC | 1 cut(s) | 119 |
| PdmI | GAANNNNTTC | 2 cut(s) | 74, 156 |
| PsiI | TTATAA | 1 cut(s) | 396 |
| PspN4I | GGNNCC | 1 cut(s) | 159 |
| RsaI | GTAC | 1 cut(s) | 171 |
| RsaNI | GTAC | 1 cut(s) | 170 |
| SaqAI | TTAA | 2 cut(s) | 197, 233 |
| Sau3AI | GATC | 1 cut(s) | 342 |
| SetI | ASST | 2 cut(s) | 55, 126 |
| SfaNI | GCATC | 1 cut(s) | 216 |
| SfcI | CTRYAG | 1 cut(s) | 13 |
| SphI | GCATGC | 1 cut(s) | 320 |
| Sse9I | AATT | 2 cut(s) | 366, 397 |
| SsiI | CCGC | 1 cut(s) | 27 |
| TaaI | ACNGT | 2 cut(s) | 131, 283 |
| TaiI | ACGT | 1 cut(s) | 126 |
| TasI | AATT | 2 cut(s) | 366, 397 |
| TatI | WGTACW | 1 cut(s) | 169 |
| Tru1I | TTAA | 2 cut(s) | 197, 233 |
| Tru9I | TTAA | 2 cut(s) | 197, 233 |
| TspDTI | ATGAA | 3 cut(s) | 83, 252, 287 |
| XapI | RAATTY | 1 cut(s) | 366 |
| XceI | RCATGY | 1 cut(s) | 320 |
| XmnI | GAANNNNTTC | 2 cut(s) | 74, 156 |
| Zsp2I | ATGCAT | 1 cut(s) | 406 |