HhH-GPD superfamily base excision DNA repair protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07930 AT3G07930 AT3G07930 AT3G07930 |
| fragaria_vesca | FvH4_1g27870 FvH4_1g27870 FvH4_1g27870 FvH4_1g27870 FvH4_1g27870 |
| malus_domestica | MD00G1164900.v1.1 |
| prunus_persica | Prupe.4G286600_v2.0.a1 |
| pyrus_communis | pycom520g01030 pycom520g01040 |
| rosa_chinensis | RchiOBHm_Chr3g0497491 |
| rosa_laevigata | RLG00000022456 |
| rosa_multiflora | Rmu_sc0000440.1_g000010 Rmu_sc0009087.1_g000013 |
| rosa_roxburghii | Rroxscaffold_6G00387970 |
| rosa_rugosa | Rorug03G0293200 Rorug03G0293300 |
| rosa_samantha | Rh3AG337000 Rh3BG375200 Rh3CG371200 Rh3DG371900 |
| rosa_wichuraiana | Rw0G018500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1232 |
| Acc36I | ACCTGC | 1 cut(s) | 1402 |
| AccI | GTMKAC | 2 cut(s) | 1246, 1416 |
| AccII | CGCG | 1 cut(s) | 873 |
| AciI | CCGC | 6 cut(s) | 44, 50, 197, 287, 873, 984 |
| AcoI | YGGCCR | 2 cut(s) | 770, 919 |
| AcsI | RAATTY | 3 cut(s) | 532, 1055, 1424 |
| AcvI | CACGTG | 1 cut(s) | 1035 |
| AcyI | GRCGYC | 1 cut(s) | 412 |
| AdeI | CACNNNGTG | 1 cut(s) | 1176 |
| AfaI | GTAC | 3 cut(s) | 563, 937, 1314 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 75, 317, 1331 |
| AflIII | ACRYGT | 1 cut(s) | 1032 |
| AgsI | TTSAA | 4 cut(s) | 491, 532, 581, 864 |
| AjiI | CACGTC | 1 cut(s) | 66 |
| AjnI | CCWGG | 2 cut(s) | 703, 1324 |
| AluBI | AGCT | 4 cut(s) | 659, 946, 1302, 1346 |
| AluI | AGCT | 4 cut(s) | 659, 946, 1302, 1346 |
| Alw26I | GTCTC | 6 cut(s) | 53, 129, 403, 872, 1067, 1284 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 374 |
| AoxI | GGCC | 5 cut(s) | 670, 770, 894, 919, 1454 |
| ApeKI | GCWGC | 3 cut(s) | 740, 1193, 1343 |
| ApoI | RAATTY | 3 cut(s) | 532, 1055, 1424 |
| AseI | ATTAAT | 1 cut(s) | 507 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 793 |
| AspLEI | GCGC | 2 cut(s) | 524, 1275 |
| AspS9I | GGNCC | 3 cut(s) | 670, 688, 1305 |
| AsuHPI | GGTGA | 5 cut(s) | 160, 196, 244, 289, 443 |
| AvaII | GGWCC | 2 cut(s) | 688, 1305 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 825, 858, 1296, 1329 |
| BalI | TGGCCA | 1 cut(s) | 921 |
| BbrPI | CACGTG | 1 cut(s) | 1035 |
| BbvI | GCAGC | 3 cut(s) | 727, 1180, 1355 |
| BccI | CCATC | 4 cut(s) | 434, 533, 781, 911 |
| BciT130I | CCWGG | 2 cut(s) | 705, 1326 |
| BciVI | GTATCC | 1 cut(s) | 826 |
| BcoDI | GTCTC | 6 cut(s) | 53, 129, 403, 872, 1067, 1284 |
| BfaI | CTAG | 3 cut(s) | 516, 629, 660 |
| BfmI | CTRYAG | 2 cut(s) | 741, 1458 |
| BfoI | RGCGCY | 1 cut(s) | 525 |
| BfuAI | ACCTGC | 1 cut(s) | 1402 |
| BfuI | GTATCC | 1 cut(s) | 826 |
| BglII | AGATCT | 1 cut(s) | 1235 |
| BisI | GCNGC | 3 cut(s) | 741, 1194, 1344 |
| BlsI | GCNGC | 3 cut(s) | 742, 1195, 1345 |
| Bme1390I | CCNGG | 2 cut(s) | 705, 1326 |
| Bme18I | GGWCC | 2 cut(s) | 688, 1305 |
| BmgBI | CACGTC | 1 cut(s) | 66 |
| BmgT120I | GGNCC | 3 cut(s) | 670, 688, 1305 |
| BmiI | GGNNCC | 3 cut(s) | 709, 1138, 1307 |
| BmrFI | CCNGG | 2 cut(s) | 705, 1326 |
| BmrI | ACTGGG | 2 cut(s) | 1135, 1429 |
| BmsI | GCATC | 4 cut(s) | 594, 739, 1339, 1446 |
| BmuI | ACTGGG | 2 cut(s) | 1135, 1429 |
| BpmI | CTGGAG | 1 cut(s) | 1008 |
| Bpu10I | CCTNAGC | 1 cut(s) | 947 |
| BpuEI | CTTGAG | 1 cut(s) | 799 |
| BsaAI | YACGTR | 1 cut(s) | 1035 |
| BsaBI | GATNNNNATC | 2 cut(s) | 507, 1080 |
| BsaHI | GRCGYC | 1 cut(s) | 412 |
| BsaI | GGTCTC | 3 cut(s) | 53, 872, 1067 |
| BsaJI | CCNNGG | 5 cut(s) | 622, 777, 1091, 1325, 1451 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 75, 317, 1331 |
| Bse118I | RCCGGY | 8 cut(s) | 112, 145, 157, 181, 193, 229, 241, 274 |
| Bse1I | ACTGG | 3 cut(s) | 1141, 1375, 1424 |
| Bse8I | GATNNNNATC | 2 cut(s) | 507, 1080 |
| BseBI | CCWGG | 2 cut(s) | 705, 1326 |
| BseDI | CCNNGG | 5 cut(s) | 622, 777, 1091, 1325, 1451 |
| BseGI | GGATG | 2 cut(s) | 730, 773 |
| BseJI | GATNNNNATC | 2 cut(s) | 507, 1080 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 75, 317, 1331 |
| BseMII | CTCAG | 7 cut(s) | 48, 284, 675, 961, 1191, 1295, 1308 |
| BseNI | ACTGG | 3 cut(s) | 1141, 1375, 1424 |
| BseRI | GAGGAG | 8 cut(s) | 91, 94, 322, 421, 763, 766, 1035, 1055 |
| BseXI | GCAGC | 3 cut(s) | 727, 1180, 1355 |
| BsgI | GTGCAG | 1 cut(s) | 1351 |
| Bsh1236I | CGCG | 1 cut(s) | 873 |
| BshFI | GGCC | 5 cut(s) | 672, 772, 896, 921, 1456 |
| BsiSI | CCGG | 9 cut(s) | 113, 146, 158, 182, 194, 230, 242, 275, 673 |
| BsiWI | CGTACG | 1 cut(s) | 561 |
| BslFI | GGGAC | 1 cut(s) | 316 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 75, 317, 1331 |
| BsmAI | GTCTC | 6 cut(s) | 53, 129, 403, 872, 1067, 1284 |
| BsmBI | CGTCTC | 1 cut(s) | 403 |
| BsmFI | GGGAC | 1 cut(s) | 316 |
| BsmI | GAATGC | 1 cut(s) | 370 |
| BsnI | GGCC | 5 cut(s) | 672, 772, 896, 921, 1456 |
| Bso31I | GGTCTC | 3 cut(s) | 53, 872, 1067 |
| Bsp143I | GATC | 2 cut(s) | 1075, 1235 |
| BspACI | CCGC | 6 cut(s) | 44, 50, 197, 287, 873, 984 |
| BspANI | GGCC | 5 cut(s) | 672, 772, 896, 921, 1456 |
| BspCNI | CTCAG | 7 cut(s) | 49, 283, 676, 960, 1192, 1294, 1309 |
| BspFNI | CGCG | 1 cut(s) | 873 |
| BspHI | TCATGA | 1 cut(s) | 1084 |
| BspLI | GGNNCC | 3 cut(s) | 709, 1138, 1307 |
| BspMAI | CTGCAG | 2 cut(s) | 745, 1462 |
| BspMI | ACCTGC | 1 cut(s) | 1402 |
| BspTNI | GGTCTC | 3 cut(s) | 53, 872, 1067 |
| BsrFI | RCCGGY | 8 cut(s) | 112, 145, 157, 181, 193, 229, 241, 274 |
| BsrI | ACTGG | 3 cut(s) | 1141, 1375, 1424 |
| BssAI | RCCGGY | 8 cut(s) | 112, 145, 157, 181, 193, 229, 241, 274 |
| BssECI | CCNNGG | 5 cut(s) | 622, 777, 1091, 1325, 1451 |
| BssMI | GATC | 2 cut(s) | 1075, 1235 |
| BssNAI | GTATAC | 1 cut(s) | 1417 |
| BssNI | GRCGYC | 1 cut(s) | 412 |
| BssT1I | CCWWGG | 2 cut(s) | 622, 1091 |
| Bst1107I | GTATAC | 1 cut(s) | 1417 |
| Bst2UI | CCWGG | 2 cut(s) | 705, 1326 |
| Bst4CI | ACNGT | 4 cut(s) | 94, 320, 700, 712 |
| Bst6I | CTCTTC | 2 cut(s) | 467, 476 |
| BstACI | GRCGYC | 1 cut(s) | 412 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1193, 1349 |
| BstBAI | YACGTR | 1 cut(s) | 1035 |
| BstC8I | GCNNGC | 3 cut(s) | 195, 1115, 1458 |
| BstDEI | CTNAG | 8 cut(s) | 57, 189, 270, 684, 947, 1200, 1281, 1317 |
| BstDSI | CCRYGG | 1 cut(s) | 777 |
| BstEII | GGTNACC | 1 cut(s) | 148 |
| BstF5I | GGATG | 2 cut(s) | 730, 773 |
| BstFNI | CGCG | 1 cut(s) | 873 |
| BstH2I | RGCGCY | 1 cut(s) | 525 |
| BstHHI | GCGC | 2 cut(s) | 524, 1275 |
| BstKTI | GATC | 2 cut(s) | 1078, 1238 |
| BstMAI | GTCTC | 6 cut(s) | 53, 129, 403, 872, 1067, 1284 |
| BstMBI | GATC | 2 cut(s) | 1075, 1235 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 613, 1193, 1349 |
| BstNI | CCWGG | 2 cut(s) | 705, 1326 |
| BstNSI | RCATGY | 2 cut(s) | 1117, 1279 |
| BstPI | GGTNACC | 1 cut(s) | 148 |
| BstSCI | CCNGG | 2 cut(s) | 703, 1324 |
| BstSFI | CTRYAG | 2 cut(s) | 741, 1458 |
| BstUI | CGCG | 1 cut(s) | 873 |
| BstV1I | GCAGC | 3 cut(s) | 727, 1180, 1355 |
| BstX2I | RGATCY | 1 cut(s) | 1235 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 160 |
| BstYI | RGATCY | 1 cut(s) | 1235 |
| BstZ17I | GTATAC | 1 cut(s) | 1417 |
| BsuI | GTATCC | 1 cut(s) | 826 |
| BsuRI | GGCC | 5 cut(s) | 672, 772, 896, 921, 1456 |
| BtgI | CCRYGG | 1 cut(s) | 777 |
| BtrI | CACGTC | 1 cut(s) | 66 |
| BtsCI | GGATG | 2 cut(s) | 730, 773 |
| BtsI | GCAGTG | 1 cut(s) | 45 |
| BtsIMutI | CAGTG | 3 cut(s) | 45, 696, 1368 |
| BveI | ACCTGC | 1 cut(s) | 1402 |
| Cac8I | GCNNGC | 3 cut(s) | 195, 1115, 1458 |
| CaiI | CAGNNNCTG | 1 cut(s) | 374 |
| CciI | TCATGA | 1 cut(s) | 1084 |
| CfoI | GCGC | 2 cut(s) | 524, 1275 |
| Cfr10I | RCCGGY | 8 cut(s) | 112, 145, 157, 181, 193, 229, 241, 274 |
| Cfr13I | GGNCC | 3 cut(s) | 670, 688, 1305 |
| CseI | GACGC | 3 cut(s) | 420, 428, 434 |
| Csp6I | GTAC | 3 cut(s) | 562, 936, 1313 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 96, 131 |
| CviAII | CATG | 7 cut(s) | 353, 416, 692, 1085, 1114, 1276, 1310 |
| CviQI | GTAC | 3 cut(s) | 562, 936, 1313 |
| DdeI | CTNAG | 8 cut(s) | 57, 189, 270, 684, 947, 1200, 1281, 1317 |
| DpnI | GATC | 2 cut(s) | 1077, 1237 |
| DpnII | GATC | 2 cut(s) | 1075, 1235 |
| DraIII | CACNNNGTG | 1 cut(s) | 1176 |
| EaeI | YGGCCR | 2 cut(s) | 770, 919 |
| Eam1104I | CTCTTC | 2 cut(s) | 467, 476 |
| EarI | CTCTTC | 2 cut(s) | 467, 476 |
| Eco130I | CCWWGG | 2 cut(s) | 622, 1091 |
| Eco147I | AGGCCT | 1 cut(s) | 1456 |
| Eco31I | GGTCTC | 3 cut(s) | 53, 872, 1067 |
| Eco47I | GGWCC | 2 cut(s) | 688, 1305 |
| Eco72I | CACGTG | 1 cut(s) | 1035 |
| Eco91I | GGTNACC | 1 cut(s) | 148 |
| EcoO65I | GGTNACC | 1 cut(s) | 148 |
| EcoRII | CCWGG | 2 cut(s) | 703, 1324 |
| EcoT14I | CCWWGG | 2 cut(s) | 622, 1091 |
| EcoT22I | ATGCAT | 2 cut(s) | 1115, 1354 |
| ErhI | CCWWGG | 2 cut(s) | 622, 1091 |
| Esp3I | CGTCTC | 1 cut(s) | 403 |
| FaeI | CATG | 7 cut(s) | 356, 419, 695, 1088, 1117, 1279, 1313 |
| FaqI | GGGAC | 1 cut(s) | 316 |
| FatI | CATG | 7 cut(s) | 352, 415, 691, 1084, 1113, 1275, 1309 |
| FauI | CCCGC | 1 cut(s) | 866 |
| FauNDI | CATATG | 2 cut(s) | 16, 1354 |
| FblI | GTMKAC | 2 cut(s) | 1246, 1416 |
| Fnu4HI | GCNGC | 3 cut(s) | 741, 1194, 1344 |
| FokI | GGATG | 2 cut(s) | 717, 760 |
| Fsp4HI | GCNGC | 3 cut(s) | 741, 1194, 1344 |
| FspBI | CTAG | 3 cut(s) | 516, 629, 660 |
| GlaI | GCGC | 2 cut(s) | 523, 1274 |
| GluI | GCNGC | 3 cut(s) | 741, 1194, 1344 |
| GsuI | CTGGAG | 1 cut(s) | 1008 |
| HaeII | RGCGCY | 1 cut(s) | 525 |
| HaeIII | GGCC | 5 cut(s) | 672, 772, 896, 921, 1456 |
| HapII | CCGG | 9 cut(s) | 113, 146, 158, 182, 194, 230, 242, 275, 673 |
| HgaI | GACGC | 3 cut(s) | 420, 428, 434 |
| HhaI | GCGC | 2 cut(s) | 524, 1275 |
| Hin1I | GRCGYC | 1 cut(s) | 412 |
| Hin1II | CATG | 7 cut(s) | 356, 419, 695, 1088, 1117, 1279, 1313 |
| Hin6I | GCGC | 2 cut(s) | 522, 1273 |
| HinP1I | GCGC | 2 cut(s) | 522, 1273 |
| HinfI | GANTC | 7 cut(s) | 139, 175, 223, 268, 304, 338, 1039 |
| HpaII | CCGG | 9 cut(s) | 113, 146, 158, 182, 194, 230, 242, 275, 673 |
| HphI | GGTGA | 5 cut(s) | 160, 196, 244, 289, 443 |
| Hpy166II | GTNNAC | 2 cut(s) | 1247, 1417 |
| Hpy188I | TCNGA | 7 cut(s) | 337, 349, 788, 888, 1054, 1128, 1162 |
| Hpy8I | GTNNAC | 2 cut(s) | 1247, 1417 |
| HpyAV | CCTTC | 3 cut(s) | 883, 991, 1008 |
| HpyCH4III | ACNGT | 4 cut(s) | 94, 320, 700, 712 |
| HpyCH4IV | ACGT | 2 cut(s) | 65, 1034 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 613, 1193, 1349 |
| HpyF3I | CTNAG | 8 cut(s) | 57, 189, 270, 684, 947, 1200, 1281, 1317 |
| HpySE526I | ACGT | 2 cut(s) | 65, 1034 |
| Hsp92I | GRCGYC | 1 cut(s) | 412 |
| Hsp92II | CATG | 7 cut(s) | 356, 419, 695, 1088, 1117, 1279, 1313 |
| HspAI | GCGC | 2 cut(s) | 522, 1273 |
| KroI | GCCGGC | 1 cut(s) | 193 |
| KroNI | GCCGGC | 1 cut(s) | 195 |
| Kzo9I | GATC | 2 cut(s) | 1075, 1235 |
| LmnI | GCTCC | 2 cut(s) | 519, 1122 |
| Lsp1109I | GCAGC | 3 cut(s) | 727, 1180, 1355 |
| LweI | GCATC | 4 cut(s) | 594, 739, 1339, 1446 |
| MaeI | CTAG | 3 cut(s) | 516, 629, 660 |
| MaeII | ACGT | 2 cut(s) | 65, 1034 |
| MaeIII | GTNAC | 5 cut(s) | 148, 184, 277, 370, 431 |
| MalI | GATC | 2 cut(s) | 1077, 1237 |
| MboI | GATC | 2 cut(s) | 1075, 1235 |
| MflI | RGATCY | 1 cut(s) | 1235 |
| MlsI | TGGCCA | 1 cut(s) | 921 |
| MluCI | AATT | 6 cut(s) | 378, 445, 532, 554, 1055, 1424 |
| MluNI | TGGCCA | 1 cut(s) | 921 |
| MlyI | GAGTC | 3 cut(s) | 262, 298, 347 |
| MmeI | TCCRAC | 1 cut(s) | 93 |
| Mox20I | TGGCCA | 1 cut(s) | 921 |
| Mph1103I | ATGCAT | 2 cut(s) | 1115, 1354 |
| MroNI | GCCGGC | 1 cut(s) | 193 |
| MroXI | GAANNNNTTC | 1 cut(s) | 793 |
| MscI | TGGCCA | 1 cut(s) | 921 |
| MseI | TTAA | 4 cut(s) | 507, 843, 1122, 1145 |
| MslI | CAYNNNNRTG | 3 cut(s) | 357, 1083, 1373 |
| Msp20I | TGGCCA | 1 cut(s) | 921 |
| MspA1I | CMGCKG | 1 cut(s) | 1346 |
| MspI | CCGG | 9 cut(s) | 113, 146, 158, 182, 194, 230, 242, 275, 673 |
| MspR9I | CCNGG | 2 cut(s) | 705, 1326 |
| Mva1269I | GAATGC | 1 cut(s) | 370 |
| MvaI | CCWGG | 2 cut(s) | 705, 1326 |
| MvnI | CGCG | 1 cut(s) | 873 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 613, 1193, 1349 |
| NaeI | GCCGGC | 1 cut(s) | 195 |
| NdeI | CATATG | 2 cut(s) | 16, 1354 |
| NdeII | GATC | 2 cut(s) | 1075, 1235 |
| NgoMIV | GCCGGC | 1 cut(s) | 193 |
| NlaIII | CATG | 7 cut(s) | 356, 419, 695, 1088, 1117, 1279, 1313 |
| NlaIV | GGNNCC | 3 cut(s) | 709, 1138, 1307 |
| NmeAIII | GCCGAG | 2 cut(s) | 748, 1285 |
| NmuCI | GTSAC | 4 cut(s) | 148, 184, 277, 431 |
| NsiI | ATGCAT | 2 cut(s) | 1115, 1354 |
| NspI | RCATGY | 2 cut(s) | 1117, 1279 |
| PaeI | GCATGC | 1 cut(s) | 1117 |
| PagI | TCATGA | 1 cut(s) | 1084 |
| PceI | AGGCCT | 1 cut(s) | 1456 |
| PctI | GAATGC | 1 cut(s) | 370 |
| PdiI | GCCGGC | 1 cut(s) | 195 |
| PdmI | GAANNNNTTC | 1 cut(s) | 793 |
| PfeI | GAWTC | 4 cut(s) | 139, 175, 223, 1039 |
| Pfl23II | CGTACG | 1 cut(s) | 561 |
| PflFI | GACNNNGTC | 1 cut(s) | 64 |
| PkrI | GCNGC | 3 cut(s) | 742, 1195, 1345 |
| PleI | GAGTC | 3 cut(s) | 262, 298, 346 |
| PmaCI | CACGTG | 1 cut(s) | 1035 |
| PmlI | CACGTG | 1 cut(s) | 1035 |
| PpsI | GAGTC | 3 cut(s) | 262, 298, 346 |
| Ppu21I | YACGTR | 1 cut(s) | 1035 |
| PshBI | ATTAAT | 1 cut(s) | 507 |
| PsiI | TTATAA | 1 cut(s) | 1232 |
| Psp6I | CCWGG | 2 cut(s) | 703, 1324 |
| PspCI | CACGTG | 1 cut(s) | 1035 |
| PspEI | GGTNACC | 1 cut(s) | 148 |
| PspGI | CCWGG | 2 cut(s) | 703, 1324 |
| PspLI | CGTACG | 1 cut(s) | 561 |
| PspN4I | GGNNCC | 3 cut(s) | 709, 1138, 1307 |
| PspPI | GGNCC | 3 cut(s) | 670, 688, 1305 |
| PstI | CTGCAG | 2 cut(s) | 745, 1462 |
| PstNI | CAGNNNCTG | 1 cut(s) | 374 |
| PsuI | RGATCY | 1 cut(s) | 1235 |
| PsyI | GACNNNGTC | 1 cut(s) | 64 |
| PvuII | CAGCTG | 1 cut(s) | 1346 |
| RsaI | GTAC | 3 cut(s) | 563, 937, 1314 |
| RsaNI | GTAC | 3 cut(s) | 562, 936, 1313 |
| RseI | CAYNNNNRTG | 3 cut(s) | 357, 1083, 1373 |
| SaqAI | TTAA | 4 cut(s) | 507, 843, 1122, 1145 |
| SatI | GCNGC | 3 cut(s) | 741, 1194, 1344 |
| Sau3AI | GATC | 2 cut(s) | 1075, 1235 |
| Sau96I | GGNCC | 3 cut(s) | 670, 688, 1305 |
| SchI | GAGTC | 3 cut(s) | 262, 298, 347 |
| ScrFI | CCNGG | 2 cut(s) | 705, 1326 |
| SfaNI | GCATC | 4 cut(s) | 594, 739, 1339, 1446 |
| SfcI | CTRYAG | 2 cut(s) | 741, 1458 |
| SinI | GGWCC | 2 cut(s) | 688, 1305 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 357, 1083, 1373 |
| SmlI | CTYRAG | 1 cut(s) | 814 |
| SmoI | CTYRAG | 1 cut(s) | 814 |
| SphI | GCATGC | 1 cut(s) | 1117 |
| Sse9I | AATT | 6 cut(s) | 378, 445, 532, 554, 1055, 1424 |
| SseBI | AGGCCT | 1 cut(s) | 1456 |
| SsiI | CCGC | 6 cut(s) | 44, 50, 197, 287, 873, 984 |
| SspI | AATATT | 1 cut(s) | 1362 |
| SspMI | CTAG | 3 cut(s) | 516, 629, 660 |
| StuI | AGGCCT | 1 cut(s) | 1456 |
| StyD4I | CCNGG | 2 cut(s) | 703, 1324 |
| StyI | CCWWGG | 2 cut(s) | 622, 1091 |
| TaaI | ACNGT | 4 cut(s) | 94, 320, 700, 712 |
| TaiI | ACGT | 2 cut(s) | 68, 1037 |
| TasI | AATT | 6 cut(s) | 378, 445, 532, 554, 1055, 1424 |
| TatI | WGTACW | 1 cut(s) | 935 |
| TfiI | GAWTC | 4 cut(s) | 139, 175, 223, 1039 |
| Tru1I | TTAA | 4 cut(s) | 507, 843, 1122, 1145 |
| Tru9I | TTAA | 4 cut(s) | 507, 843, 1122, 1145 |
| TscAI | CASTG | 3 cut(s) | 45, 703, 1375 |
| TseFI | GTSAC | 4 cut(s) | 148, 184, 277, 431 |
| TseI | GCWGC | 3 cut(s) | 740, 1193, 1343 |
| Tsp45I | GTSAC | 4 cut(s) | 148, 184, 277, 431 |
| TspDTI | ATGAA | 1 cut(s) | 777 |
| TspGWI | ACGGA | 1 cut(s) | 794 |
| TspRI | CASTG | 3 cut(s) | 45, 703, 1375 |
| Tth111I | GACNNNGTC | 1 cut(s) | 64 |
| VpaK11BI | GGWCC | 2 cut(s) | 688, 1305 |
| VspI | ATTAAT | 1 cut(s) | 507 |
| XapI | RAATTY | 3 cut(s) | 532, 1055, 1424 |
| XbaI | TCTAGA | 1 cut(s) | 628 |
| XceI | RCATGY | 2 cut(s) | 1117, 1279 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 160, 1032 |
| XmiI | GTMKAC | 2 cut(s) | 1246, 1416 |
| XmnI | GAANNNNTTC | 1 cut(s) | 793 |
| XspI | CTAG | 3 cut(s) | 516, 629, 660 |
| Zsp2I | ATGCAT | 2 cut(s) | 1115, 1354 |