Rorug03G0293200
ERF Family

HhH-GPD superfamily base excision DNA repair protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0007267
Physical Location & Seq
Forward (+)
30021309 .. 30026707
5399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0293200.1

Sequence Viewer

Length: 1986 bp
ATGAAGATGTTCTCAGCTCAAGTTGAGGAAGGAAGGAAAGGAGAGAACGGGAAGCCTTCAGTTGGTCCAGTGTATCGGAATTTACTTTCAAAAAATGATTTTCCACCGCCTCATCCTGAAATAAGAACAGCTTGGGATGTCTTTAGTCAATCTGCTCAACAGTTTCCTGGAAATAGAATGCTTGGATGGCGTAAAATTGTGGATGGGAAGATAGGACCTTATGTTTGGAAAACCTACAATGAGGTTTATGAAGAAGTTCTGCTTGTTGGTTCTGCATTACGAGCATCTGGTGTGAAACCTGGTTCCCCGATTGGAATTTATGGTTCAAATTGCCCTCAATGGATTATGGCAATGGAGGCTTGCAATGCCCATAGTTTGATCTGTGTGCCTCTCTACGATACCCTAGGGCCAGGAGCTGTAAACTTCATCATAGATCATGCAGAGGTTGATGTTGTTTTCGTCCAAGATAAGAAAGTGAAAGAACTATTGAGTCCTGATTGTACATCTACCCAACGACTAAAAGTTATGGTTTGCTTCACTTCATTGACAGATGAAGAGAAGGATAAAGCAGTGCAGATTGGGATAAAACCGTACTCATGGAGTGAGTTCACCGAGATGGGAAAACAAAACCCGTCAGATATTTTTCCACCTCAGCCTGAAACTATCTGCGCAATTATGTACACAAGTGGTACTAGTGGAGATCCTAAAGGTGTTGTGCTAACACATGAAAACACCGCATATGGTGTGAGAGGGATTGACCTCTTTATGGAACAATTTGAAGATAAGATGACAGTGGATGATGTGTATCTATCTTTCCTTCCCCTGGCTCATATTATGGATCGCATAATTGAGGAGTATTTTTTTCGCACTGGTGCTTCTGTTGGCTACTATCATGGAGATCTTAATGCATTGAGTGATGATATGATGGAGTTGAAGCCAACACTTCTTGCTGGAGTACCTCGTGTTTTCGAAAGAATACATGAAGGTATAAAGCAAGCAGTGCAACAGCTCAATCCCAGGAGGCAGAAGATTTTTGACATTCTCTACAAGTACAAACTTGCTTGGATGAACATGGGGTTTAAGAATAAAAATGCCTCACCAATAGCTGATCTGTTGGCCTTCAGAAAGATAAAGAATAGGCTTGGGGGTAAAATTCGACTTATATTATCTGGAGGTGCACCCTTAAGCGCTGAGATTGAAGAATTCTTGCGAGTTACTTGCTGCTGTTTCGTAGTCCAAGGATATGGTTTGACAGAAACTGTTGGGCCAACTACTTTTGGGTATCCTGATGAAATGTGCATGATTGGTGCTGTTGGTACTGTATCTGTTTTCAACGAGCTGCGCCTCGAAGAGGTTCCTGATATGGGCTACGATCCACTTGGAGATCCTCCTTGTGGTGAGATATGTTTGAGAGGCAAGACTGTTTTTGCTGGTTACCACGAAAGTCCTGAATTGACAAGGGAAGCAATCAAAGATGGCTGGTTCCACACAGGGGACATAGGGCAAATACTTCCAAATGGAACCATCAAGATCATTGATAGGAAAAAGAATCTGATTAAACTCTCACAAGGAGAGTATGTTGCACTTGAGTACTTGGAAAATGTTTATGGCATTTCTTCTGTTATTGATGAAATCTGGGTCTACGGAAATAGCTTCAAGTCAAAGCTTGTTGCAGTGGTGGTACCAGAAGAAAAAAGCACCAAAAAGTGGGCTGATTTAAATGGTCACACGGGTTCGTTTTCTGACCTTTGTTTTCTTGATCAGCTCAAGAACCATATTCTGGAAGAGCTCAAGCTAACAGCTGAGAGAAACAAGCTGAGAGGTTTTGAATATATCAAAGGAATCATTATAGAACCTCACCCCTTTGACATGGAAAGGGACATGGTGACTGCCACTTTGAAGAAGAAAAGAAATCAGTTGCTCAAGTATTACCAGGTTCGACTTGATGAACTCTACCAAAATCTGGATGCCGGACAAAAATACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000700 GO:0000785 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003696 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006220 GO:0006244 GO:0006259 GO:0006281 GO:0006284 GO:0006285 GO:0006304 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008263 GO:0009056 GO:0009058 GO:0009117 GO:0009166 GO:0009219 GO:0009223 GO:0009262 GO:0009264 GO:0009314 GO:0009394 GO:0009628 GO:0009987 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016798 GO:0016799 GO:0018130 GO:0019104 GO:0019438 GO:0019439 GO:0019637 GO:0019692 GO:0031974 GO:0031981 GO:0033554 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045008 GO:0046386 GO:0046434 GO:0046483 GO:0046700 GO:0050896 GO:0051716 GO:0055086 GO:0070013 GO:0071704 GO:0072527 GO:0072529 GO:0090304 GO:0090305 GO:0097159 GO:0140097 GO:1901135 GO:1901136 GO:1901292 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1990837
KEGG Pathways
Metabolic & Signaling
ko03410 map03410
Pfam Domains
Protein Families
HhH-GPD

Protein Analysis

661

Amino Acids

74.46

Weight (kDa)

5.79

Isoelectric Point (pI)

28.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMP-binding PF00501 49 - 480 1.7e-82 AMP-binding enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 670
Acc65I GGTACC 1 cut(s) 1681
AccB1I GGYRCC 1 cut(s) 1681
AccB7I CCANNNNNTGG 3 cut(s) 1707, 1780, 1963
AccI GTMKAC 1 cut(s) 1641
AciI CCGC 2 cut(s) 107, 735
AclWI GGATC 4 cut(s) 695, 846, 1367, 1379
AcsI RAATTY 4 cut(s) 79, 315, 1152, 1202
AcuI CTGAAG 2 cut(s) 42, 1105
AfaI GTAC 9 cut(s) 502, 593, 680, 691, 957, 1052, 1318, 1592, 1683
AfeI AGCGCT 1 cut(s) 1189
AflII CTTAAG 1 cut(s) 1183
AgsI TTSAA 9 cut(s) 90, 327, 779, 934, 1199, 1333, 1657, 1829, 1900
AhlI ACTAGT 1 cut(s) 692
AjnI CCWGG 6 cut(s) 166, 298, 409, 822, 1016, 1932
Alw21I GWGCWC 2 cut(s) 1180, 1791
Alw44I GTGCAC 1 cut(s) 1176
AlwI GGATC 4 cut(s) 695, 846, 1367, 1379
AlwNI CAGNNNCTG 2 cut(s) 416, 1259
Aor51HI AGCGCT 1 cut(s) 1189
AoxI GGCC 3 cut(s) 407, 1116, 1265
ApaLI GTGCAC 1 cut(s) 1176
ApeKI GCWGC 2 cut(s) 1221, 1339
ApoI RAATTY 4 cut(s) 79, 315, 1152, 1202
ArsI GACNNNNNNTTYG 4 cut(s) 207, 239, 1879, 1911
Asp700I GAANNNNTTC 3 cut(s) 8, 255, 1353
Asp718I GGTACC 1 cut(s) 1681
AspA2I CCTAGG 1 cut(s) 403
AspLEI GCGC 3 cut(s) 671, 1190, 1344
AspS9I GGNCC 4 cut(s) 65, 215, 407, 1265
AsuHPI GGTGA 5 cut(s) 601, 1089, 1409, 1850, 1897
AsuII TTCGAA 1 cut(s) 969
AvaII GGWCC 2 cut(s) 65, 215
AvrII CCTAGG 1 cut(s) 403
BaeGI GKGCMC 1 cut(s) 1180
BanI GGYRCC 1 cut(s) 1681
BanII GRGCYC 1 cut(s) 1791
BauI CACGAG 1 cut(s) 960
Bbv12I GWGCWC 2 cut(s) 1180, 1791
BbvCI CCTCAGC 1 cut(s) 651
BbvI GCAGC 2 cut(s) 1208, 1326
BccI CCATC 6 cut(s) 180, 197, 610, 919, 1469, 1532
BcgI CGANNNNNNTGC 2 cut(s) 1200, 1234
BciT130I CCWGG 6 cut(s) 168, 300, 411, 824, 1018, 1934
BciVI GTATCC 1 cut(s) 1293
BclI TGATCA 1 cut(s) 1759
BcuI ACTAGT 1 cut(s) 692
BfaI CTAG 3 cut(s) 404, 693, 1984
BfoI RGCGCY 1 cut(s) 1191
BfrI CTTAAG 1 cut(s) 1183
BfuI GTATCC 1 cut(s) 1293
BglII AGATCT 1 cut(s) 898
BisI GCNGC 2 cut(s) 1222, 1340
BlnI CCTAGG 1 cut(s) 403
BlsI GCNGC 2 cut(s) 1223, 1341
BmcAI AGTACT 1 cut(s) 1592
Bme1390I CCNGG 6 cut(s) 168, 300, 411, 824, 1018, 1934
Bme18I GGWCC 2 cut(s) 65, 215
BmgT120I GGNCC 4 cut(s) 65, 215, 407, 1265
BmiI GGNNCC 5 cut(s) 304, 1356, 1484, 1522, 1683
BmrFI CCNGG 6 cut(s) 168, 300, 411, 824, 1018, 1934
BmsI GCATC 2 cut(s) 293, 1957
BpmI CTGGAG 2 cut(s) 972, 1191
Bpu10I CCTNAGC 1 cut(s) 651
Bpu14I TTCGAA 1 cut(s) 969
BpuEI CTTGAG 4 cut(s) 1607, 1751, 1775, 1907
BsaBI GATNNNNATC 1 cut(s) 804
BsaJI CCNNGG 4 cut(s) 403, 822, 1016, 1237
BsaXI ACNNNNNCTCC 2 cut(s) 1563, 1593
Bse1I ACTGG 2 cut(s) 68, 874
Bse3DI GCAATG 2 cut(s) 357, 370
Bse8I GATNNNNATC 1 cut(s) 804
BseBI CCWGG 6 cut(s) 168, 300, 411, 824, 1018, 1934
BseDI CCNNGG 4 cut(s) 403, 822, 1016, 1237
BseGI GGATG 7 cut(s) 112, 142, 191, 208, 802, 1071, 1972
BseJI GATNNNNATC 1 cut(s) 804
BseMI GCAATG 2 cut(s) 357, 370
BseMII CTCAG 5 cut(s) 27, 665, 1182, 1794, 1808
BseNI ACTGG 2 cut(s) 68, 874
BseRI GAGGAG 1 cut(s) 866
BseSI GKGCMC 1 cut(s) 1180
BseXI GCAGC 2 cut(s) 1208, 1326
BsgI GTGCAG 1 cut(s) 593
BshFI GGCC 3 cut(s) 409, 1118, 1267
BshNI GGYRCC 1 cut(s) 1681
BsiHKAI GWGCWC 2 cut(s) 1180, 1791
BsiSI CCGG 1 cut(s) 1971
BslFI GGGAC 2 cut(s) 1508, 1892
BsmFI GGGAC 2 cut(s) 1508, 1892
BsmI GAATGC 1 cut(s) 183
BsnI GGCC 3 cut(s) 409, 1118, 1267
Bsp119I TTCGAA 1 cut(s) 969
Bsp1286I GDGCHC 2 cut(s) 1180, 1791
Bsp1407I TGTACA 2 cut(s) 500, 678
BspACI CCGC 2 cut(s) 107, 735
BspANI GGCC 3 cut(s) 409, 1118, 1267
BspCNI CTCAG 5 cut(s) 26, 664, 1183, 1795, 1809
BspLI GGNNCC 5 cut(s) 304, 1356, 1484, 1522, 1683
BspPI GGATC 4 cut(s) 695, 846, 1367, 1379
BspQI GCTCTTC 1 cut(s) 1779
BspT104I TTCGAA 1 cut(s) 969
BspT107I GGYRCC 1 cut(s) 1681
BspTI CTTAAG 1 cut(s) 1183
BsrDI GCAATG 2 cut(s) 357, 370
BsrGI TGTACA 2 cut(s) 500, 678
BsrI ACTGG 2 cut(s) 68, 874
BssECI CCNNGG 4 cut(s) 403, 822, 1016, 1237
BssSI CACGAG 1 cut(s) 960
BssT1I CCWWGG 2 cut(s) 403, 1237
Bst2BI CACGAG 1 cut(s) 960
Bst2UI CCWGG 6 cut(s) 168, 300, 411, 824, 1018, 1934
Bst4CI ACNGT 6 cut(s) 162, 591, 793, 1261, 1321, 1423
Bst6I CTCTTC 3 cut(s) 549, 1344, 1779
BstAFI CTTAAG 1 cut(s) 1183
BstAPI GCANNNNNTGC 1 cut(s) 1000
BstAUI TGTACA 2 cut(s) 500, 678
BstBI TTCGAA 1 cut(s) 969
BstC8I GCNNGC 2 cut(s) 361, 996
BstDEI CTNAG 5 cut(s) 13, 651, 1191, 1803, 1817
BstEII GGTNACC 1 cut(s) 1433
BstENI CCTNNNNNAGG 1 cut(s) 1349
BstF5I GGATG 7 cut(s) 112, 142, 191, 208, 802, 1071, 1972
BstH2I RGCGCY 1 cut(s) 1191
BstHHI GCGC 3 cut(s) 671, 1190, 1344
BstMWI GCNNNNNNNGC 5 cut(s) 187, 281, 356, 365, 1000
BstNI CCWGG 6 cut(s) 168, 300, 411, 824, 1018, 1934
BstPI GGTNACC 1 cut(s) 1433
BstSCI CCNGG 6 cut(s) 166, 298, 409, 822, 1016, 1932
BstSLI GKGCMC 1 cut(s) 1180
BstV1I GCAGC 2 cut(s) 1208, 1326
BstX2I RGATCY 3 cut(s) 700, 898, 1384
BstXI CCANNNNNNTGG 1 cut(s) 1244
BstYI RGATCY 3 cut(s) 700, 898, 1384
BsuI GTATCC 1 cut(s) 1293
BsuRI GGCC 3 cut(s) 409, 1118, 1267
BtsCI GGATG 7 cut(s) 112, 142, 191, 208, 802, 1071, 1972
BtsI GCAGTG 3 cut(s) 576, 1005, 1680
BtsIMutI CAGTG 6 cut(s) 75, 576, 798, 867, 1005, 1680
Cac8I GCNNGC 2 cut(s) 361, 996
CaiI CAGNNNCTG 2 cut(s) 416, 1259
CfoI GCGC 3 cut(s) 671, 1190, 1344
Cfr13I GGNCC 4 cut(s) 65, 215, 407, 1265
CsiI ACCWGGT 2 cut(s) 298, 1932
Csp6I GTAC 9 cut(s) 501, 592, 679, 690, 956, 1051, 1317, 1591, 1682
CviAII CATG 9 cut(s) 437, 597, 725, 893, 980, 1072, 1300, 1870, 1882
CviQI GTAC 9 cut(s) 501, 592, 679, 690, 956, 1051, 1317, 1591, 1682
DdeI CTNAG 5 cut(s) 13, 651, 1191, 1803, 1817
DraI TTTAAA 1 cut(s) 1719
Eam1104I CTCTTC 3 cut(s) 549, 1344, 1779
EarI CTCTTC 3 cut(s) 549, 1344, 1779
Ecl136II GAGCTC 1 cut(s) 1789
Eco130I CCWWGG 2 cut(s) 403, 1237
Eco24I GRGCYC 1 cut(s) 1791
Eco47I GGWCC 2 cut(s) 65, 215
Eco47III AGCGCT 1 cut(s) 1189
Eco53kI GAGCTC 1 cut(s) 1789
Eco57I CTGAAG 2 cut(s) 42, 1105
Eco91I GGTNACC 1 cut(s) 1433
EcoICRI GAGCTC 1 cut(s) 1789
EcoNI CCTNNNNNAGG 1 cut(s) 1349
EcoO109I RGGNCCY 1 cut(s) 215
EcoO65I GGTNACC 1 cut(s) 1433
EcoRI GAATTC 1 cut(s) 1202
EcoRII CCWGG 6 cut(s) 166, 298, 409, 822, 1016, 1932
EcoT14I CCWWGG 2 cut(s) 403, 1237
EcoT22I ATGCAT 1 cut(s) 910
EcoT38I GRGCYC 1 cut(s) 1791
ErhI CCWWGG 2 cut(s) 403, 1237
FaeI CATG 9 cut(s) 440, 600, 728, 896, 983, 1075, 1303, 1873, 1885
FalI AAGNNNNNCTT 4 cut(s) 115, 147, 246, 278
FaqI GGGAC 2 cut(s) 1508, 1892
FatI CATG 9 cut(s) 436, 596, 724, 892, 979, 1071, 1299, 1869, 1881
FauNDI CATATG 1 cut(s) 739
FbaI TGATCA 1 cut(s) 1759
FblI GTMKAC 1 cut(s) 1641
Fnu4HI GCNGC 2 cut(s) 1222, 1340
FokI GGATG 7 cut(s) 99, 149, 198, 215, 809, 1078, 1979
FriOI GRGCYC 1 cut(s) 1791
Fsp4HI GCNGC 2 cut(s) 1222, 1340
FspBI CTAG 3 cut(s) 404, 693, 1984
FspI TGCGCA 1 cut(s) 670
GlaI GCGC 3 cut(s) 670, 1189, 1343
GluI GCNGC 2 cut(s) 1222, 1340
GsuI CTGGAG 2 cut(s) 972, 1191
HaeII RGCGCY 1 cut(s) 1191
HaeIII GGCC 3 cut(s) 409, 1118, 1267
HapII CCGG 1 cut(s) 1971
HhaI GCGC 3 cut(s) 671, 1190, 1344
Hin1II CATG 9 cut(s) 440, 600, 728, 896, 983, 1075, 1303, 1873, 1885
Hin6I GCGC 3 cut(s) 669, 1188, 1342
HinP1I GCGC 3 cut(s) 669, 1188, 1342
HindIII AAGCTT 1 cut(s) 1664
HinfI GANTC 3 cut(s) 490, 1549, 1842
HpaII CCGG 1 cut(s) 1971
HphI GGTGA 5 cut(s) 601, 1089, 1409, 1850, 1897
Hpy166II GTNNAC 5 cut(s) 421, 609, 681, 1178, 1642
Hpy188I TCNGA 5 cut(s) 78, 637, 1124, 1554, 1744
Hpy8I GTNNAC 5 cut(s) 421, 609, 681, 1178, 1642
HpyAV CCTTC 7 cut(s) 23, 27, 66, 553, 827, 977, 1129
HpyCH4III ACNGT 6 cut(s) 162, 591, 793, 1261, 1321, 1423
HpyF10VI GCNNNNNNNGC 5 cut(s) 187, 281, 356, 365, 1000
HpyF3I CTNAG 5 cut(s) 13, 651, 1191, 1803, 1817
Hsp92II CATG 9 cut(s) 440, 600, 728, 896, 983, 1075, 1303, 1873, 1885
HspAI GCGC 3 cut(s) 669, 1188, 1342
KpnI GGTACC 1 cut(s) 1685
Ksp22I TGATCA 1 cut(s) 1759
LguI GCTCTTC 1 cut(s) 1779
LmnI GCTCC 1 cut(s) 413
Lsp1109I GCAGC 2 cut(s) 1208, 1326
LweI GCATC 2 cut(s) 293, 1957
MabI ACCWGGT 2 cut(s) 298, 1932
MaeI CTAG 3 cut(s) 404, 693, 1984
MaeIII GTNAC 4 cut(s) 1213, 1433, 1724, 1885
MflI RGATCY 3 cut(s) 700, 898, 1384
MhlI GDGCHC 2 cut(s) 1180, 1791
MlyI GAGTC 1 cut(s) 499
Mph1103I ATGCAT 1 cut(s) 910
MroXI GAANNNNTTC 3 cut(s) 8, 255, 1353
MseI TTAA 5 cut(s) 903, 1080, 1184, 1557, 1718
MslI CAYNNNNRTG 1 cut(s) 614
MspA1I CMGCKG 1 cut(s) 1802
MspCI CTTAAG 1 cut(s) 1183
MspI CCGG 1 cut(s) 1971
MspR9I CCNGG 6 cut(s) 168, 300, 411, 824, 1018, 1934
Mva1269I GAATGC 1 cut(s) 183
MvaI CCWGG 6 cut(s) 168, 300, 411, 824, 1018, 1934
MwoI GCNNNNNNNGC 5 cut(s) 187, 281, 356, 365, 1000
NdeI CATATG 1 cut(s) 739
NlaIII CATG 9 cut(s) 440, 600, 728, 896, 983, 1075, 1303, 1873, 1885
NlaIV GGNNCC 5 cut(s) 304, 1356, 1484, 1522, 1683
NmuCI GTSAC 2 cut(s) 1724, 1885
NsbI TGCGCA 1 cut(s) 670
NsiI ATGCAT 1 cut(s) 910
NspV TTCGAA 1 cut(s) 969
PciSI GCTCTTC 1 cut(s) 1779
PctI GAATGC 1 cut(s) 183
PdmI GAANNNNTTC 3 cut(s) 8, 255, 1353
PfeI GAWTC 2 cut(s) 1549, 1842
PflMI CCANNNNNTGG 3 cut(s) 1707, 1780, 1963
PfoI TCCNGGA 1 cut(s) 166
PkrI GCNGC 2 cut(s) 1223, 1341
PleI GAGTC 1 cut(s) 498
PpsI GAGTC 1 cut(s) 498
PpuMI RGGWCCY 1 cut(s) 215
Psp124BI GAGCTC 1 cut(s) 1791
Psp5II RGGWCCY 1 cut(s) 215
Psp6I CCWGG 6 cut(s) 166, 298, 409, 822, 1016, 1932
PspEI GGTNACC 1 cut(s) 1433
PspGI CCWGG 6 cut(s) 166, 298, 409, 822, 1016, 1932
PspN4I GGNNCC 5 cut(s) 304, 1356, 1484, 1522, 1683
PspPI GGNCC 4 cut(s) 65, 215, 407, 1265
PspPPI RGGWCCY 1 cut(s) 215
PstNI CAGNNNCTG 2 cut(s) 416, 1259
PsuI RGATCY 3 cut(s) 700, 898, 1384
PvuII CAGCTG 1 cut(s) 1802
RsaI GTAC 9 cut(s) 502, 593, 680, 691, 957, 1052, 1318, 1592, 1683
RsaNI GTAC 9 cut(s) 501, 592, 679, 690, 956, 1051, 1317, 1591, 1682
RseI CAYNNNNRTG 1 cut(s) 614
SacI GAGCTC 1 cut(s) 1791
SapI GCTCTTC 1 cut(s) 1779
SaqAI TTAA 5 cut(s) 903, 1080, 1184, 1557, 1718
SatI GCNGC 2 cut(s) 1222, 1340
Sau96I GGNCC 4 cut(s) 65, 215, 407, 1265
ScaI AGTACT 1 cut(s) 1592
SchI GAGTC 1 cut(s) 499
ScrFI CCNGG 6 cut(s) 168, 300, 411, 824, 1018, 1934
SduI GDGCHC 2 cut(s) 1180, 1791
SexAI ACCWGGT 2 cut(s) 298, 1932
SfaNI GCATC 2 cut(s) 293, 1957
SfuI TTCGAA 1 cut(s) 969
SinI GGWCC 2 cut(s) 65, 215
SmiI ATTTAAAT 1 cut(s) 1719
SmiMI CAYNNNNRTG 1 cut(s) 614
SmlI CTYRAG 6 cut(s) 18, 1183, 1586, 1766, 1790, 1922
SmoI CTYRAG 6 cut(s) 18, 1183, 1586, 1766, 1790, 1922
SpeI ACTAGT 1 cut(s) 692
SsiI CCGC 2 cut(s) 107, 735
SspMI CTAG 3 cut(s) 404, 693, 1984
SstI GAGCTC 1 cut(s) 1791
StyD4I CCNGG 6 cut(s) 166, 298, 409, 822, 1016, 1932
StyI CCWWGG 2 cut(s) 403, 1237
SwaI ATTTAAAT 1 cut(s) 1719
TaaI ACNGT 6 cut(s) 162, 591, 793, 1261, 1321, 1423
TaqI TCGA 4 cut(s) 969, 1156, 1347, 1939
TatI WGTACW 4 cut(s) 500, 678, 1050, 1590
TfiI GAWTC 2 cut(s) 1549, 1842
Tru1I TTAA 5 cut(s) 903, 1080, 1184, 1557, 1718
Tru9I TTAA 5 cut(s) 903, 1080, 1184, 1557, 1718
TscAI CASTG 6 cut(s) 75, 576, 798, 874, 1005, 1680
TseFI GTSAC 2 cut(s) 1724, 1885
TseI GCWGC 2 cut(s) 1221, 1339
Tsp45I GTSAC 2 cut(s) 1724, 1885
TspGWI ACGGA 1 cut(s) 1659
TspRI CASTG 6 cut(s) 75, 576, 798, 874, 1005, 1680
Van91I CCANNNNNTGG 3 cut(s) 1707, 1780, 1963
Vha464I CTTAAG 1 cut(s) 1183
VneI GTGCAC 1 cut(s) 1176
VpaK11BI GGWCC 2 cut(s) 65, 215
XagI CCTNNNNNAGG 1 cut(s) 1349
XapI RAATTY 4 cut(s) 79, 315, 1152, 1202
XmaJI CCTAGG 1 cut(s) 403
XmiI GTMKAC 1 cut(s) 1641
XmnI GAANNNNTTC 3 cut(s) 8, 255, 1353
XspI CTAG 3 cut(s) 404, 693, 1984
ZrmI AGTACT 1 cut(s) 1592
Zsp2I ATGCAT 1 cut(s) 910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.