Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0007267

Physical Location & Seq

Genomic Coordinates Reverse (-)

374275 .. 380827

Gene Structure 6553 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00387970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGGTAAATAAGCGTGTTGGCTCATTTGGAAATGTCTGTCAATTGTTTGAGTATTTAGGCATCTCGTATCGCTTGTTAGATGGAGAACTCTCTTTTGATGTAAAAATGGGCTTGCTTGAAGGCCCAATTAGGTTACGAGTGGAGAGAAACATATGTGAGAATGGGAGCGGTGGCGGCGGCGGAGGCATCGGCGGCGGCGACCACGTCCAACAGGAGGAGGAGAAGAAAACTGTTGGGCAGAAGCCAAAGCCGGTGGTGGTGTCTCACTATTTCCAGAATCAGCCGGTGACCAAGCCGGTGGTGGTTTCTCGCTATTTCCAGACTCGGCCGGTCACTAAGCCGGTGGTGGATTTCCAGACTCAGCCGGTGGTGGCTTCTCGCTATTTCCAGAATCAGCCGGTGACTGAGCCGGCGGTGGTGGTTTCTCGCTATTTCCAGAATCAGCCGGTGACTAAGCCGGTGGTGGAAATAGGGACTCAACCAGAAAACGGTAAGATAACCTCCTCCTCCGAGTCAAAGTCACAGTCAATGTCAGACCATGTGAATGTGAATGCAGTTACTGAAATTAGAAGCAAGAAAGAAAAGAGAAAGAGGAGACGCCATGACGCCGACGCTGGTGACAACGATGGCAATTGTAAAATGACAAAGAAGAAGAAGAAGAAGAAGAACGAGAAGATTCTTCAAGTAGAGGCAGATATTAATCAAACTAGGAGCGCCATCTTGAATTTTGAGGATATGCTTTCTCAATTTGCTTACGAGGGTTGTGGGGTTGAATGGAATAATAAACATAATAAGATGCCCAAAAAGCTTTCCCAAGGTCAAGATAGTGAAGATACTACTATCTATCCTTGTAGTCAAGCTAGTAAGACGGGCCGGAACTCAACTGAGGACCATGCCACTGTGCCTGGAACCGTGAAACAAGCCAAAGTGCATCCACAGGCTGCAGAGAGGAGGAAGAAGAATGAAACTCGGCCATCTGTGGAAATCCGAAAGGTTTCTCCTTACTTCCAAACCTCAAGTAATGAGTGCAAGGATACAAAAGTTAAACCCCTAAACGCCATTCAAAATCTCGCGGGGAGACCTTTCAGAAGGAGGCCACCAAAGAAAATAATGCAGATGGCCACTTGTTGCAAAGTACAAACAGGCGCAGAAAGAAGTCTCCTAAAAACAGGGCTACTCTTACCGCTTCACAGAGGAAGGACGAAGCATACCGAAGGAGAACTCCAGATAACACGTGGATTCCTCCTCGCTCTGAATTTGGTCTCCTCCAAGAAGATCACTATCATGACCCTTGGAGAGTGTTGGTTATATGCATGCTCCTTAATCGGACAACAGGAACCCAGTTTTGCATTTATGTGGCTTTCCATTCCTGTTAGAGCCTTCAGAAGTAAGAATATTGTGGACAGGGCTAAGTTAAAAGAAGTTTTATCAGATTTCTTCACTTTGTGTCCTAATGCAAAGGCTGCTACTGAGGTTGCCACACGGGATATAGAACAGGTTATAAGATCTCTTGGTCTACATAAGAGAGCCGAGATGATACAGCGCATGTCTCAGGAGTATTTAGGGGAAAGCTGGACCCATGTACCTGAGTTGCCTGGTGTTGGCAAGTATGCAGCTGATGCATATGCAATATTCTGCACTGGTATGTGGGAAAGAGTGAAACCTGCTGACCACAAACTAAATTTATACTGGGAATTTCTCCACAGCATCAAGAGTGAGCCGAGGCCTGCAGTTTTTATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000700 GO:0000785 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003696 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006139 GO:0006220 GO:0006244 GO:0006259 GO:0006281 GO:0006284 GO:0006285 GO:0006304 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008263 GO:0009056 GO:0009058 GO:0009117 GO:0009166 GO:0009219 GO:0009223 GO:0009262 GO:0009264 GO:0009314 GO:0009394 GO:0009628 GO:0009987 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016798 GO:0016799 GO:0018130 GO:0019104 GO:0019438 GO:0019439 GO:0019637 GO:0019692 GO:0031974 GO:0031981 GO:0033554 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045008 GO:0046386 GO:0046434 GO:0046483 GO:0046700 GO:0050896 GO:0051716 GO:0055086 GO:0070013 GO:0071704 GO:0072527 GO:0072529 GO:0090304 GO:0090305 GO:0097159 GO:0140097 GO:1901135 GO:1901136 GO:1901292 GO:1901360 GO:1901361 GO:1901362 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1990837

KEGG Pathways

Metabolic & Signaling

ko03410 map03410

Pfam Domains

Protein Families

HhH-GPD

Protein Analysis

580

Amino Acids

65.3

Weight (kDa)

9.61

Isoelectric Point (pI)

54.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007267)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07930 AT3G07930 AT3G07930 AT3G07930
fragaria_vesca	FvH4_1g27870 FvH4_1g27870 FvH4_1g27870 FvH4_1g27870 FvH4_1g27870
malus_domestica	MD00G1164900.v1.1
prunus_persica	Prupe.4G286600_v2.0.a1
pyrus_communis	pycom520g01030 pycom520g01040
rosa_chinensis	RchiOBHm_Chr3g0497491
rosa_laevigata	RLG00000022456
rosa_multiflora	Rmu_sc0000440.1_g000010 Rmu_sc0009087.1_g000013
rosa_roxburghii	Rroxscaffold_6G00387970
rosa_rugosa	Rorug03G0293200 Rorug03G0293300
rosa_samantha	Rh3AG337000 Rh3BG375200 Rh3CG371200 Rh3DG371900
rosa_wichuraiana	Rw0G018500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1502
Acc36I	ACCTGC	1 cut(s)	1672
AccBSI	CCGCTC	1 cut(s)	168
AccI	GTMKAC	1 cut(s)	1516
AccII	CGCG	1 cut(s)	1073
AciI	CCGC	9 cut(s)	168, 174, 177, 180, 192, 195, 413, 1073, 1184
AcoI	YGGCCR	3 cut(s)	326, 971, 1119
AcsI	RAATTY	4 cut(s)	724, 1255, 1681, 1694
AcuI	CTGAAG	1 cut(s)	1366
AcvI	CACGTG	1 cut(s)	1235
AcyI	GRCGYC	2 cut(s)	598, 606
AdeI	CACNNNGTG	1 cut(s)	1446
AfaI	GTAC	2 cut(s)	1137, 1584
AfiI	CCNNNNNNNGG	3 cut(s)	214, 488, 1601
AflIII	ACRYGT	1 cut(s)	1232
AgsI	TTSAA	5 cut(s)	119, 683, 724, 773, 1064
AjiI	CACGTC	1 cut(s)	205
AjnI	CCWGG	2 cut(s)	904, 1594
AluBI	AGCT	4 cut(s)	808, 860, 1572, 1616
AluI	AGCT	4 cut(s)	808, 860, 1572, 1616
Alw26I	GTCTC	6 cut(s)	267, 589, 1072, 1163, 1267, 1554
AlwNI	CAGNNNCTG	1 cut(s)	560
AoxI	GGCC	7 cut(s)	121, 326, 871, 971, 1094, 1119, 1724
ApeKI	GCWGC	3 cut(s)	941, 1463, 1613
ApoI	RAATTY	4 cut(s)	724, 1255, 1681, 1694
ArsI	GACNNNNNNTTYG	2 cut(s)	509, 541
AseI	ATTAAT	1 cut(s)	699
Asp700I	GAANNNNTTC	1 cut(s)	994
AspLEI	GCGC	3 cut(s)	716, 1148, 1545
AspS9I	GGNCC	4 cut(s)	122, 871, 889, 1575
AsuHPI	GGTGA	4 cut(s)	298, 412, 460, 629
AvaII	GGWCC	2 cut(s)	889, 1575
BaeI	ACNNNNGTAYC	4 cut(s)	1026, 1059, 1566, 1599
BalI	TGGCCA	1 cut(s)	1121
BbrPI	CACGTG	1 cut(s)	1235
BbvI	GCAGC	3 cut(s)	928, 1450, 1625
BccI	CCATC	5 cut(s)	74, 620, 725, 982, 1111
BciT130I	CCWGG	2 cut(s)	906, 1596
BciVI	GTATCC	1 cut(s)	1027
BcoDI	GTCTC	6 cut(s)	267, 589, 1072, 1163, 1267, 1554
BfaI	CTAG	2 cut(s)	708, 861
BfmI	CTRYAG	2 cut(s)	942, 1728
BfoI	RGCGCY	1 cut(s)	717
BfuAI	ACCTGC	1 cut(s)	1672
BfuI	GTATCC	1 cut(s)	1027
BglII	AGATCT	1 cut(s)	1505
BisI	GCNGC	7 cut(s)	175, 178, 193, 196, 942, 1464, 1614
BlsI	GCNGC	7 cut(s)	176, 179, 194, 197, 943, 1465, 1615
Bme1390I	CCNGG	2 cut(s)	906, 1596
Bme18I	GGWCC	2 cut(s)	889, 1575
BmgBI	CACGTC	1 cut(s)	205
BmgT120I	GGNCC	4 cut(s)	122, 871, 889, 1575
BmiI	GGNNCC	3 cut(s)	910, 1338, 1577
BmrFI	CCNGG	2 cut(s)	906, 1596
BmrI	ACTGGG	2 cut(s)	1335, 1699
BmsI	GCATC	6 cut(s)	69, 195, 786, 940, 1609, 1716
BmuI	ACTGGG	2 cut(s)	1335, 1699
BpmI	CTGGAG	1 cut(s)	1208
BpuEI	CTTGAG	1 cut(s)	1000
BsaAI	YACGTR	1 cut(s)	1235
BsaBI	GATNNNNATC	2 cut(s)	699, 1280
BsaHI	GRCGYC	2 cut(s)	598, 606
BsaI	GGTCTC	2 cut(s)	1072, 1267
BsaJI	CCNNGG	3 cut(s)	814, 1291, 1721
Bsc4I	CCNNNNNNNGG	3 cut(s)	214, 488, 1601
Bse1I	ACTGG	3 cut(s)	1341, 1645, 1694
Bse8I	GATNNNNATC	2 cut(s)	699, 1280
BseBI	CCWGG	2 cut(s)	906, 1596
BseDI	CCNNGG	3 cut(s)	814, 1291, 1721
BseGI	GGATG	1 cut(s)	931
BseJI	GATNNNNATC	2 cut(s)	699, 1280
BseLI	CCNNNNNNNGG	3 cut(s)	214, 488, 1601
BseMII	CTCAG	6 cut(s)	374, 396, 876, 1461, 1565, 1578
BseNI	ACTGG	3 cut(s)	1341, 1645, 1694
BseRI	GAGGAG	8 cut(s)	230, 233, 493, 496, 607, 964, 1235, 1255
BseX3I	CGGCCG	1 cut(s)	326
BseXI	GCAGC	3 cut(s)	928, 1450, 1625
BsgI	GTGCAG	1 cut(s)	1621
Bsh1236I	CGCG	1 cut(s)	1073
Bsh1285I	CGRYCG	1 cut(s)	329
BshFI	GGCC	7 cut(s)	123, 328, 873, 973, 1096, 1121, 1726
BsiEI	CGRYCG	1 cut(s)	329
BslFI	GGGAC	1 cut(s)	487
BslI	CCNNNNNNNGG	3 cut(s)	214, 488, 1601
BsmAI	GTCTC	6 cut(s)	267, 589, 1072, 1163, 1267, 1554
BsmBI	CGTCTC	1 cut(s)	589
BsmFI	GGGAC	1 cut(s)	487
BsmI	GAATGC	1 cut(s)	556
BsnI	GGCC	7 cut(s)	123, 328, 873, 973, 1096, 1121, 1726
Bso31I	GGTCTC	2 cut(s)	1072, 1267
Bsp143I	GATC	2 cut(s)	1275, 1505
BspACI	CCGC	9 cut(s)	168, 174, 177, 180, 192, 195, 413, 1073, 1184
BspANI	GGCC	7 cut(s)	123, 328, 873, 973, 1096, 1121, 1726
BspCNI	CTCAG	6 cut(s)	373, 397, 877, 1462, 1564, 1579
BspFNI	CGCG	1 cut(s)	1073
BspHI	TCATGA	1 cut(s)	1284
BspLI	GGNNCC	3 cut(s)	910, 1338, 1577
BspMAI	CTGCAG	2 cut(s)	946, 1732
BspMI	ACCTGC	1 cut(s)	1672
BspTNI	GGTCTC	2 cut(s)	1072, 1267
BsrBI	CCGCTC	1 cut(s)	168
BsrI	ACTGG	3 cut(s)	1341, 1645, 1694
BssECI	CCNNGG	3 cut(s)	814, 1291, 1721
BssMI	GATC	2 cut(s)	1275, 1505
BssNI	GRCGYC	2 cut(s)	598, 606
BssT1I	CCWWGG	2 cut(s)	814, 1291
Bst2UI	CCWGG	2 cut(s)	906, 1596
Bst4CI	ACNGT	5 cut(s)	232, 491, 525, 901, 913
BstACI	GRCGYC	2 cut(s)	598, 606
BstAPI	GCANNNNNTGC	2 cut(s)	1463, 1619
BstBAI	YACGTR	1 cut(s)	1235
BstC8I	GCNNGC	4 cut(s)	113, 411, 1315, 1728
BstDEI	CTNAG	9 cut(s)	336, 360, 405, 453, 885, 1410, 1470, 1551, 1587
BstEII	GGTNACC	1 cut(s)	286
BstF5I	GGATG	1 cut(s)	931
BstFNI	CGCG	1 cut(s)	1073
BstH2I	RGCGCY	1 cut(s)	717
BstHHI	GCGC	3 cut(s)	716, 1148, 1545
BstKTI	GATC	2 cut(s)	1278, 1508
BstMAI	GTCTC	6 cut(s)	267, 589, 1072, 1163, 1267, 1554
BstMBI	GATC	2 cut(s)	1275, 1505
BstMCI	CGRYCG	1 cut(s)	329
BstMWI	GCNNNNNNNGC	6 cut(s)	174, 183, 192, 805, 1463, 1619
BstNI	CCWGG	2 cut(s)	906, 1596
BstNSI	RCATGY	2 cut(s)	1317, 1549
BstPI	GGTNACC	1 cut(s)	286
BstSCI	CCNGG	2 cut(s)	904, 1594
BstSFI	CTRYAG	2 cut(s)	942, 1728
BstUI	CGCG	1 cut(s)	1073
BstV1I	GCAGC	3 cut(s)	928, 1450, 1625
BstX2I	RGATCY	1 cut(s)	1505
BstXI	CCANNNNNNTGG	1 cut(s)	298
BstYI	RGATCY	1 cut(s)	1505
BstZI	CGGCCG	1 cut(s)	326
BsuI	GTATCC	1 cut(s)	1027
BsuRI	GGCC	7 cut(s)	123, 328, 873, 973, 1096, 1121, 1726
BtrI	CACGTC	1 cut(s)	205
BtsCI	GGATG	1 cut(s)	931
BtsIMutI	CAGTG	2 cut(s)	897, 1638
BveI	ACCTGC	1 cut(s)	1672
Cac8I	GCNNGC	4 cut(s)	113, 411, 1315, 1728
CaiI	CAGNNNCTG	1 cut(s)	560
CciI	TCATGA	1 cut(s)	1284
CfoI	GCGC	3 cut(s)	716, 1148, 1545
Cfr13I	GGNCC	4 cut(s)	122, 871, 889, 1575
CseI	GACGC	3 cut(s)	606, 614, 620
Csp6I	GTAC	2 cut(s)	1136, 1583
CspCI	CAANNNNNGTGG	2 cut(s)	234, 269
CviAII	CATG	7 cut(s)	539, 602, 893, 1285, 1314, 1546, 1580
CviQI	GTAC	2 cut(s)	1136, 1583
DdeI	CTNAG	9 cut(s)	336, 360, 405, 453, 885, 1410, 1470, 1551, 1587
DpnI	GATC	2 cut(s)	1277, 1507
DpnII	GATC	2 cut(s)	1275, 1505
DraIII	CACNNNGTG	1 cut(s)	1446
EaeI	YGGCCR	3 cut(s)	326, 971, 1119
EagI	CGGCCG	1 cut(s)	326
EciI	GGCGGA	1 cut(s)	195
EclXI	CGGCCG	1 cut(s)	326
Eco130I	CCWWGG	2 cut(s)	814, 1291
Eco147I	AGGCCT	1 cut(s)	1726
Eco31I	GGTCTC	2 cut(s)	1072, 1267
Eco47I	GGWCC	2 cut(s)	889, 1575
Eco52I	CGGCCG	1 cut(s)	326
Eco57I	CTGAAG	1 cut(s)	1366
Eco72I	CACGTG	1 cut(s)	1235
Eco91I	GGTNACC	1 cut(s)	286
EcoO65I	GGTNACC	1 cut(s)	286
EcoRII	CCWGG	2 cut(s)	904, 1594
EcoT14I	CCWWGG	2 cut(s)	814, 1291
EcoT22I	ATGCAT	2 cut(s)	1315, 1624
ErhI	CCWWGG	2 cut(s)	814, 1291
Esp3I	CGTCTC	1 cut(s)	589
FaeI	CATG	7 cut(s)	542, 605, 896, 1288, 1317, 1549, 1583
FaqI	GGGAC	1 cut(s)	487
FatI	CATG	7 cut(s)	538, 601, 892, 1284, 1313, 1545, 1579
FauI	CCCGC	1 cut(s)	1066
FauNDI	CATATG	2 cut(s)	152, 1624
FblI	GTMKAC	1 cut(s)	1516
Fnu4HI	GCNGC	7 cut(s)	175, 178, 193, 196, 942, 1464, 1614
FokI	GGATG	1 cut(s)	918
Fsp4HI	GCNGC	7 cut(s)	175, 178, 193, 196, 942, 1464, 1614
FspBI	CTAG	2 cut(s)	708, 861
GlaI	GCGC	3 cut(s)	715, 1147, 1544
GluI	GCNGC	7 cut(s)	175, 178, 193, 196, 942, 1464, 1614
GsuI	CTGGAG	1 cut(s)	1208
HaeII	RGCGCY	1 cut(s)	717
HaeIII	GGCC	7 cut(s)	123, 328, 873, 973, 1096, 1121, 1726
HgaI	GACGC	3 cut(s)	606, 614, 620
HhaI	GCGC	3 cut(s)	716, 1148, 1545
Hin1I	GRCGYC	2 cut(s)	598, 606
Hin1II	CATG	7 cut(s)	542, 605, 896, 1288, 1317, 1549, 1583
Hin6I	GCGC	3 cut(s)	714, 1146, 1543
HinP1I	GCGC	3 cut(s)	714, 1146, 1543
HindIII	AAGCTT	1 cut(s)	806
HinfI	GANTC	9 cut(s)	277, 322, 358, 391, 439, 475, 512, 676, 1239
HphI	GGTGA	4 cut(s)	298, 412, 460, 629
Hpy166II	GTNNAC	2 cut(s)	1402, 1517
Hpy188I	TCNGA	8 cut(s)	511, 535, 989, 1088, 1254, 1328, 1385, 1432
Hpy8I	GTNNAC	2 cut(s)	1402, 1517
Hpy99I	CGWCG	1 cut(s)	614
HpyAV	CCTTC	5 cut(s)	113, 1083, 1191, 1208, 1390
HpyCH4III	ACNGT	5 cut(s)	232, 491, 525, 901, 913
HpyCH4IV	ACGT	2 cut(s)	204, 1234
HpyF10VI	GCNNNNNNNGC	6 cut(s)	174, 183, 192, 805, 1463, 1619
HpyF3I	CTNAG	9 cut(s)	336, 360, 405, 453, 885, 1410, 1470, 1551, 1587
HpySE526I	ACGT	2 cut(s)	204, 1234
Hsp92I	GRCGYC	2 cut(s)	598, 606
Hsp92II	CATG	7 cut(s)	542, 605, 896, 1288, 1317, 1549, 1583
HspAI	GCGC	3 cut(s)	714, 1146, 1543
KroI	GCCGGC	1 cut(s)	409
KroNI	GCCGGC	1 cut(s)	411
Kzo9I	GATC	2 cut(s)	1275, 1505
LmnI	GCTCC	3 cut(s)	165, 711, 1322
Lsp1109I	GCAGC	3 cut(s)	928, 1450, 1625
LweI	GCATC	6 cut(s)	69, 195, 786, 940, 1609, 1716
MaeI	CTAG	2 cut(s)	708, 861
MaeII	ACGT	2 cut(s)	204, 1234
MaeIII	GTNAC	8 cut(s)	132, 286, 331, 400, 448, 519, 556, 617
MalI	GATC	2 cut(s)	1277, 1507
MbiI	CCGCTC	1 cut(s)	168
MboI	GATC	2 cut(s)	1275, 1505
MfeI	CAATTG	2 cut(s)	41, 631
MflI	RGATCY	1 cut(s)	1505
MlsI	TGGCCA	1 cut(s)	1121
MluCI	AATT	9 cut(s)	41, 126, 564, 631, 724, 746, 1255, 1681, 1694
MluNI	TGGCCA	1 cut(s)	1121
MlyI	GAGTC	4 cut(s)	316, 352, 469, 521
MmeI	TCCRAC	1 cut(s)	232
Mox20I	TGGCCA	1 cut(s)	1121
Mph1103I	ATGCAT	2 cut(s)	1315, 1624
MroNI	GCCGGC	1 cut(s)	409
MroXI	GAANNNNTTC	1 cut(s)	994
MscI	TGGCCA	1 cut(s)	1121
MseI	TTAA	4 cut(s)	699, 1044, 1322, 1415
MslI	CAYNNNNRTG	4 cut(s)	543, 1283, 1354, 1643
Msp20I	TGGCCA	1 cut(s)	1121
MspA1I	CMGCKG	1 cut(s)	1616
MspR9I	CCNGG	2 cut(s)	906, 1596
MunI	CAATTG	2 cut(s)	41, 631
Mva1269I	GAATGC	1 cut(s)	556
MvaI	CCWGG	2 cut(s)	906, 1596
MvnI	CGCG	1 cut(s)	1073
MwoI	GCNNNNNNNGC	6 cut(s)	174, 183, 192, 805, 1463, 1619
NaeI	GCCGGC	1 cut(s)	411
NdeI	CATATG	2 cut(s)	152, 1624
NdeII	GATC	2 cut(s)	1275, 1505
NgoMIV	GCCGGC	1 cut(s)	409
NlaIII	CATG	7 cut(s)	542, 605, 896, 1288, 1317, 1549, 1583
NlaIV	GGNNCC	3 cut(s)	910, 1338, 1577
NmeAIII	GCCGAG	3 cut(s)	304, 949, 1555
NmuCI	GTSAC	6 cut(s)	286, 331, 400, 448, 519, 617
NsiI	ATGCAT	2 cut(s)	1315, 1624
NspI	RCATGY	2 cut(s)	1317, 1549
PaeI	GCATGC	1 cut(s)	1317
PagI	TCATGA	1 cut(s)	1284
PceI	AGGCCT	1 cut(s)	1726
PcsI	WCGNNNNNNNCGW	1 cut(s)	195
PctI	GAATGC	1 cut(s)	556
PdiI	GCCGGC	1 cut(s)	411
PdmI	GAANNNNTTC	1 cut(s)	994
PfeI	GAWTC	5 cut(s)	277, 391, 439, 676, 1239
PflFI	GACNNNGTC	1 cut(s)	203
PkrI	GCNGC	7 cut(s)	176, 179, 194, 197, 943, 1465, 1615
PleI	GAGTC	4 cut(s)	316, 352, 469, 520
PmaCI	CACGTG	1 cut(s)	1235
PmlI	CACGTG	1 cut(s)	1235
PpsI	GAGTC	4 cut(s)	316, 352, 469, 520
Ppu21I	YACGTR	1 cut(s)	1235
PshBI	ATTAAT	1 cut(s)	699
PsiI	TTATAA	1 cut(s)	1502
Psp6I	CCWGG	2 cut(s)	904, 1594
PspCI	CACGTG	1 cut(s)	1235
PspEI	GGTNACC	1 cut(s)	286
PspGI	CCWGG	2 cut(s)	904, 1594
PspN4I	GGNNCC	3 cut(s)	910, 1338, 1577
PspPI	GGNCC	4 cut(s)	122, 871, 889, 1575
PstI	CTGCAG	2 cut(s)	946, 1732
PstNI	CAGNNNCTG	1 cut(s)	560
PsuI	RGATCY	1 cut(s)	1505
PsyI	GACNNNGTC	1 cut(s)	203
PvuII	CAGCTG	1 cut(s)	1616
RsaI	GTAC	2 cut(s)	1137, 1584
RsaNI	GTAC	2 cut(s)	1136, 1583
RseI	CAYNNNNRTG	4 cut(s)	543, 1283, 1354, 1643
SaqAI	TTAA	4 cut(s)	699, 1044, 1322, 1415
SatI	GCNGC	7 cut(s)	175, 178, 193, 196, 942, 1464, 1614
Sau3AI	GATC	2 cut(s)	1275, 1505
Sau96I	GGNCC	4 cut(s)	122, 871, 889, 1575
SchI	GAGTC	4 cut(s)	316, 352, 469, 521
ScrFI	CCNGG	2 cut(s)	906, 1596
SfaNI	GCATC	6 cut(s)	69, 195, 786, 940, 1609, 1716
SfcI	CTRYAG	2 cut(s)	942, 1728
SinI	GGWCC	2 cut(s)	889, 1575
SmiMI	CAYNNNNRTG	4 cut(s)	543, 1283, 1354, 1643
SmlI	CTYRAG	1 cut(s)	1015
SmoI	CTYRAG	1 cut(s)	1015
SphI	GCATGC	1 cut(s)	1317
Sse9I	AATT	9 cut(s)	41, 126, 564, 631, 724, 746, 1255, 1681, 1694
SseBI	AGGCCT	1 cut(s)	1726
SsiI	CCGC	9 cut(s)	168, 174, 177, 180, 192, 195, 413, 1073, 1184
SspI	AATATT	2 cut(s)	1396, 1632
SspMI	CTAG	2 cut(s)	708, 861
StuI	AGGCCT	1 cut(s)	1726
StyD4I	CCNGG	2 cut(s)	904, 1594
StyI	CCWWGG	2 cut(s)	814, 1291
TaaI	ACNGT	5 cut(s)	232, 491, 525, 901, 913
TaiI	ACGT	2 cut(s)	207, 1237
TasI	AATT	9 cut(s)	41, 126, 564, 631, 724, 746, 1255, 1681, 1694
TatI	WGTACW	1 cut(s)	1135
TauI	GCSGC	4 cut(s)	177, 180, 195, 198
TfiI	GAWTC	5 cut(s)	277, 391, 439, 676, 1239
Tru1I	TTAA	4 cut(s)	699, 1044, 1322, 1415
Tru9I	TTAA	4 cut(s)	699, 1044, 1322, 1415
TscAI	CASTG	2 cut(s)	904, 1645
TseFI	GTSAC	6 cut(s)	286, 331, 400, 448, 519, 617
TseI	GCWGC	3 cut(s)	941, 1463, 1613
Tsp45I	GTSAC	6 cut(s)	286, 331, 400, 448, 519, 617
TspDTI	ATGAA	1 cut(s)	978
TspRI	CASTG	2 cut(s)	904, 1645
Tth111I	GACNNNGTC	1 cut(s)	203
VpaK11BI	GGWCC	2 cut(s)	889, 1575
VspI	ATTAAT	1 cut(s)	699
XapI	RAATTY	4 cut(s)	724, 1255, 1681, 1694
XceI	RCATGY	2 cut(s)	1317, 1549
XcmI	CCANNNNNNNNNTGG	2 cut(s)	298, 1232
XmiI	GTMKAC	1 cut(s)	1516
XmnI	GAANNNNTTC	1 cut(s)	994
XspI	CTAG	2 cut(s)	708, 861
Zsp2I	ATGCAT	2 cut(s)	1315, 1624

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.